PRJNA195909:zebrafish embryo and larva development
Gene Symbol | Gene ID | Gene Info |
---|---|---|
zbtb7a
|
ENSDARG00000039899 | zinc finger and BTB domain containing 7a |
zbtb7c
|
ENSDARG00000100985 | zinc finger and BTB domain containing 7C |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
zbtb7c | dr11_v1_chr21_-_3201027_3201027 | -0.36 | 3.4e-01 | Click! |
zbtb7a | dr11_v1_chr22_-_20386982_20386982 | 0.31 | 4.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr20_+_25340814 | 1.57 |
ENSDART00000063028
|
ctgfa
|
connective tissue growth factor a |
chr11_-_3552067 | 1.45 |
ENSDART00000163656
|
CAMK2N1
|
si:dkey-33m11.6 |
chr10_-_22797959 | 1.34 |
ENSDART00000183269
|
pcolcea
|
procollagen C-endopeptidase enhancer a |
chr10_-_24371312 | 1.31 |
ENSDART00000149362
|
pitpnab
|
phosphatidylinositol transfer protein, alpha b |
chr21_+_25187210 | 1.22 |
ENSDART00000101147
ENSDART00000167528 |
si:dkey-183i3.5
|
si:dkey-183i3.5 |
chr19_-_42607451 | 1.17 |
ENSDART00000004392
|
fkbp9
|
FK506 binding protein 9 |
chr4_+_17279966 | 1.09 |
ENSDART00000067005
ENSDART00000137487 |
bcat1
|
branched chain amino-acid transaminase 1, cytosolic |
chr4_-_17725008 | 1.00 |
ENSDART00000016658
|
chpt1
|
choline phosphotransferase 1 |
chr8_-_54304381 | 0.93 |
ENSDART00000184177
|
RHO (1 of many)
|
rhodopsin |
chr9_-_10003711 | 0.91 |
ENSDART00000124516
ENSDART00000102448 |
ugt1ab
|
UDP glucuronosyltransferase 1 family a, b |
chr14_-_21219659 | 0.86 |
ENSDART00000089867
|
ppp2r2cb
|
protein phosphatase 2, regulatory subunit B, gamma b |
chr24_-_26304386 | 0.85 |
ENSDART00000175416
|
otos
|
otospiralin |
chr10_+_21789954 | 0.84 |
ENSDART00000157769
ENSDART00000171703 |
pcdh1gc5
|
protocadherin 1 gamma c 5 |
chr19_-_9472893 | 0.78 |
ENSDART00000045565
ENSDART00000137505 |
vamp1
|
vesicle-associated membrane protein 1 |
chr17_-_42097267 | 0.77 |
ENSDART00000110871
ENSDART00000155484 |
nkx2.4a
|
NK2 homeobox 4a |
chr6_+_41181869 | 0.75 |
ENSDART00000002046
|
opn1mw1
|
opsin 1 (cone pigments), medium-wave-sensitive, 1 |
chr7_-_2039060 | 0.65 |
ENSDART00000173879
|
si:cabz01007794.1
|
si:cabz01007794.1 |
chr3_-_39695856 | 0.64 |
ENSDART00000148247
|
b9d1
|
B9 protein domain 1 |
chr24_-_40744672 | 0.64 |
ENSDART00000160672
|
CU633479.1
|
|
chr23_+_28582865 | 0.62 |
ENSDART00000020296
|
l1cama
|
L1 cell adhesion molecule, paralog a |
chr7_+_60079302 | 0.61 |
ENSDART00000051524
|
etnppl
|
ethanolamine-phosphate phospho-lyase |
chr14_-_45346558 | 0.60 |
ENSDART00000090844
|
zgc:153018
|
zgc:153018 |
chr8_-_18537866 | 0.59 |
ENSDART00000148802
ENSDART00000148962 ENSDART00000149506 |
nexn
|
nexilin (F actin binding protein) |
chr1_+_10683843 | 0.57 |
ENSDART00000054879
|
zgc:103678
|
zgc:103678 |
chr2_-_54054225 | 0.56 |
ENSDART00000167239
|
CABZ01050249.1
|
|
chr10_+_33982010 | 0.52 |
ENSDART00000180431
|
fryb
|
furry homolog b (Drosophila) |
chr20_+_88168 | 0.52 |
ENSDART00000149283
|
zgc:112001
|
zgc:112001 |
chr7_-_22956889 | 0.51 |
ENSDART00000101447
|
tnfsf10l
|
TNF superfamily member 10, like |
chr14_-_48103207 | 0.49 |
ENSDART00000056712
|
etfdh
|
electron-transferring-flavoprotein dehydrogenase |
chr19_-_10243148 | 0.47 |
ENSDART00000148073
|
shisa7b
|
shisa family member 7 |
chr13_+_29771463 | 0.46 |
ENSDART00000134424
ENSDART00000138332 ENSDART00000134330 ENSDART00000160944 ENSDART00000076992 ENSDART00000160921 |
pax2a
|
paired box 2a |
chr5_-_41560874 | 0.45 |
ENSDART00000136702
|
dnajb5
|
DnaJ (Hsp40) homolog, subfamily B, member 5 |
chr5_+_22510639 | 0.45 |
ENSDART00000080919
|
rpl36a
|
ribosomal protein L36A |
chr6_-_19305589 | 0.45 |
ENSDART00000165484
|
jpt1a
|
Jupiter microtubule associated homolog 1a |
chr4_+_3980247 | 0.44 |
ENSDART00000049194
|
gpr37b
|
G protein-coupled receptor 37b |
chr10_+_158590 | 0.44 |
ENSDART00000081982
|
KCNJ15
|
potassium voltage-gated channel subfamily J member 15 |
chr7_-_22956716 | 0.44 |
ENSDART00000122113
|
tnfsf10l
|
TNF superfamily member 10, like |
chr1_+_47585700 | 0.42 |
ENSDART00000153746
ENSDART00000084457 |
sh3pxd2aa
|
SH3 and PX domains 2Aa |
chr23_-_45407631 | 0.42 |
ENSDART00000148484
ENSDART00000150186 |
zgc:101853
|
zgc:101853 |
chr16_+_22618620 | 0.42 |
ENSDART00000185728
ENSDART00000041625 |
chrnb2b
|
cholinergic receptor, nicotinic, beta 2b |
chr9_-_9998087 | 0.36 |
ENSDART00000124423
|
ugt1ab
|
UDP glucuronosyltransferase 1 family a, b |
chr15_+_39096736 | 0.35 |
ENSDART00000129511
ENSDART00000014877 |
robo2
|
roundabout, axon guidance receptor, homolog 2 (Drosophila) |
chr5_-_38094130 | 0.35 |
ENSDART00000131831
|
si:ch211-284e13.4
|
si:ch211-284e13.4 |
chr3_+_14388010 | 0.34 |
ENSDART00000171726
ENSDART00000165452 |
tmem56b
|
transmembrane protein 56b |
chr2_-_10896745 | 0.34 |
ENSDART00000114609
|
cdcp2
|
CUB domain containing protein 2 |
chr2_-_20323901 | 0.34 |
ENSDART00000125531
|
plppr5a
|
phospholipid phosphatase related 5a |
chr24_-_18477672 | 0.33 |
ENSDART00000126928
ENSDART00000158393 |
si:dkey-73n8.3
|
si:dkey-73n8.3 |
chr16_+_44314097 | 0.33 |
ENSDART00000148684
|
dpys
|
dihydropyrimidinase |
chr21_+_44112914 | 0.30 |
ENSDART00000062836
|
fgf1b
|
fibroblast growth factor 1b |
chr16_+_3004422 | 0.29 |
ENSDART00000189969
|
CABZ01043952.1
|
|
chr2_-_32501501 | 0.29 |
ENSDART00000181309
|
faim2a
|
Fas apoptotic inhibitory molecule 2a |
chr3_-_39696066 | 0.28 |
ENSDART00000015393
|
b9d1
|
B9 protein domain 1 |
chr1_-_59141715 | 0.28 |
ENSDART00000164941
ENSDART00000138870 |
si:ch1073-110a20.1
|
si:ch1073-110a20.1 |
chr11_+_24900123 | 0.27 |
ENSDART00000044987
ENSDART00000148023 |
timm17a
|
translocase of inner mitochondrial membrane 17 homolog A (yeast) |
chr12_+_39685485 | 0.27 |
ENSDART00000163403
|
LO017650.1
|
|
chr12_-_43711918 | 0.27 |
ENSDART00000193110
|
CU914622.2
|
|
chr18_+_19975787 | 0.24 |
ENSDART00000138103
|
skor1b
|
SKI family transcriptional corepressor 1b |
chr20_+_50852356 | 0.24 |
ENSDART00000167517
ENSDART00000168396 |
gphnb
|
gephyrin b |
chr20_-_50239406 | 0.24 |
ENSDART00000128053
|
tmem121ab
|
transmembrane protein 121Ab |
chr9_-_55586151 | 0.22 |
ENSDART00000181886
|
arsh
|
arylsulfatase H |
chr3_-_3328097 | 0.22 |
ENSDART00000193140
|
tmem184bb
|
transmembrane protein 184bb |
chr5_+_5689476 | 0.21 |
ENSDART00000022729
|
unm_sa808
|
un-named sa808 |
chr6_+_8339298 | 0.20 |
ENSDART00000151672
|
si:ch211-276a17.5
|
si:ch211-276a17.5 |
chr24_+_30120815 | 0.19 |
ENSDART00000157979
|
plppr5b
|
phospholipid phosphatase related 5b |
chr7_-_33350082 | 0.19 |
ENSDART00000008785
|
anp32a
|
acidic (leucine-rich) nuclear phosphoprotein 32 family, member A |
chr23_-_10914275 | 0.19 |
ENSDART00000112965
|
pdzrn3a
|
PDZ domain containing RING finger 3a |
chr17_+_53418445 | 0.19 |
ENSDART00000097631
|
slc9a1b
|
solute carrier family 9 member A1b |
chr15_-_3252727 | 0.19 |
ENSDART00000131173
|
stoml3a
|
stomatin (EPB72)-like 3a |
chr20_+_27194833 | 0.18 |
ENSDART00000150072
|
si:dkey-85n7.8
|
si:dkey-85n7.8 |
chr11_+_807153 | 0.16 |
ENSDART00000173289
|
vgll4b
|
vestigial-like family member 4b |
chr6_-_43221581 | 0.15 |
ENSDART00000112239
|
si:dkey-178o16.4
|
si:dkey-178o16.4 |
chr14_-_4556896 | 0.14 |
ENSDART00000044678
ENSDART00000192863 |
GABRA2
|
gamma-aminobutyric acid type A receptor alpha2 subunit |
chr1_-_19502322 | 0.14 |
ENSDART00000181888
ENSDART00000044030 |
kitb
|
v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog b |
chr19_+_46095210 | 0.13 |
ENSDART00000159753
|
stmnd1
|
stathmin domain containing 1 |
chr20_-_25626693 | 0.13 |
ENSDART00000132247
|
paics
|
phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase |
chr2_-_37858723 | 0.13 |
ENSDART00000145711
|
si:ch211-284o19.8
|
si:ch211-284o19.8 |
chr5_-_51484156 | 0.13 |
ENSDART00000162064
|
CR388055.1
|
|
chr1_-_52128425 | 0.13 |
ENSDART00000149939
|
rad23aa
|
RAD23 homolog A, nucleotide excision repair protein a |
chr12_-_44016898 | 0.12 |
ENSDART00000175304
|
si:dkey-201i2.4
|
si:dkey-201i2.4 |
chr21_-_13493608 | 0.12 |
ENSDART00000192307
|
nsmfa
|
NMDA receptor synaptonuclear signaling and neuronal migration factor a |
chr6_+_29707129 | 0.11 |
ENSDART00000023549
ENSDART00000164849 |
phb2b
|
prohibitin 2b |
chr4_+_40373029 | 0.11 |
ENSDART00000131216
|
si:ch211-218h8.1
|
si:ch211-218h8.1 |
chr10_+_26515946 | 0.11 |
ENSDART00000134276
|
synj1
|
synaptojanin 1 |
chr5_+_19337108 | 0.11 |
ENSDART00000089078
|
acacb
|
acetyl-CoA carboxylase beta |
chr7_+_31074636 | 0.08 |
ENSDART00000173805
|
tjp1a
|
tight junction protein 1a |
chr22_+_1526040 | 0.07 |
ENSDART00000164089
ENSDART00000159126 |
si:ch211-255f4.6
|
si:ch211-255f4.6 |
chr7_+_16963091 | 0.07 |
ENSDART00000173770
|
nav2a
|
neuron navigator 2a |
chr25_+_32474031 | 0.07 |
ENSDART00000152124
|
sqor
|
sulfide quinone oxidoreductase |
chr16_-_31686602 | 0.06 |
ENSDART00000170357
|
c1s
|
complement component 1, s subcomponent |
chr2_+_38225427 | 0.05 |
ENSDART00000141614
|
si:ch211-14a17.11
|
si:ch211-14a17.11 |
chr18_-_50799510 | 0.05 |
ENSDART00000174373
|
taldo1
|
transaldolase 1 |
chr21_-_2124497 | 0.04 |
ENSDART00000166003
|
si:rp71-1h20.5
|
si:rp71-1h20.5 |
chr6_-_19042294 | 0.04 |
ENSDART00000159461
|
si:rp71-81e14.2
|
si:rp71-81e14.2 |
chr17_+_31237866 | 0.03 |
ENSDART00000076943
|
prlh2r
|
prolactin releasing hormone 2 receptor |
chr11_+_34921492 | 0.03 |
ENSDART00000128070
|
gnai2a
|
guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a |
chr14_+_743346 | 0.02 |
ENSDART00000110511
|
klb
|
klotho beta |
chr20_+_43113465 | 0.01 |
ENSDART00000004842
|
dusp23a
|
dual specificity phosphatase 23a |
chr4_-_38281909 | 0.01 |
ENSDART00000162448
|
si:ch211-229l10.9
|
si:ch211-229l10.9 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 1.1 | GO:0009098 | leucine biosynthetic process(GO:0009098) |
0.1 | 0.9 | GO:2001238 | positive regulation of extrinsic apoptotic signaling pathway(GO:2001238) |
0.1 | 0.9 | GO:0070262 | peptidyl-serine dephosphorylation(GO:0070262) |
0.1 | 0.6 | GO:0048739 | cardiac muscle fiber development(GO:0048739) |
0.1 | 0.5 | GO:0021588 | cerebellum formation(GO:0021588) |
0.1 | 0.5 | GO:0048172 | regulation of short-term neuronal synaptic plasticity(GO:0048172) |
0.1 | 0.8 | GO:0035493 | SNARE complex assembly(GO:0035493) |
0.0 | 0.4 | GO:0050975 | sensory perception of touch(GO:0050975) |
0.0 | 0.1 | GO:0038093 | Fc receptor signaling pathway(GO:0038093) |
0.0 | 0.6 | GO:0045773 | positive regulation of axon extension(GO:0045773) |
0.0 | 0.1 | GO:2001295 | malonyl-CoA biosynthetic process(GO:2001295) |
0.0 | 0.1 | GO:0070221 | sulfide oxidation(GO:0019418) sulfide oxidation, using sulfide:quinone oxidoreductase(GO:0070221) |
0.0 | 1.3 | GO:0015914 | phospholipid transport(GO:0015914) |
0.0 | 0.3 | GO:0030324 | respiratory tube development(GO:0030323) lung development(GO:0030324) |
0.0 | 0.3 | GO:0006208 | pyrimidine nucleobase catabolic process(GO:0006208) |
0.0 | 0.3 | GO:0001867 | complement activation, lectin pathway(GO:0001867) |
0.0 | 0.2 | GO:0098719 | sodium ion import(GO:0097369) sodium ion import across plasma membrane(GO:0098719) sodium ion import into cell(GO:1990118) |
0.0 | 0.8 | GO:0021854 | hypothalamus development(GO:0021854) |
0.0 | 0.3 | GO:0030150 | protein import into mitochondrial matrix(GO:0030150) |
0.0 | 0.7 | GO:0018298 | protein-chromophore linkage(GO:0018298) |
0.0 | 0.4 | GO:0006801 | superoxide metabolic process(GO:0006801) |
0.0 | 0.5 | GO:0051085 | chaperone mediated protein folding requiring cofactor(GO:0051085) |
0.0 | 0.1 | GO:0001992 | regulation of systemic arterial blood pressure by vasopressin(GO:0001992) |
0.0 | 0.1 | GO:0006189 | 'de novo' IMP biosynthetic process(GO:0006189) |
0.0 | 0.2 | GO:0033209 | tumor necrosis factor-mediated signaling pathway(GO:0033209) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.9 | GO:0036038 | MKS complex(GO:0036038) |
0.1 | 0.6 | GO:0044295 | axonal growth cone(GO:0044295) |
0.0 | 0.4 | GO:0002102 | podosome(GO:0002102) |
0.0 | 0.5 | GO:0032591 | dendritic spine membrane(GO:0032591) |
0.0 | 0.9 | GO:0000159 | protein phosphatase type 2A complex(GO:0000159) |
0.0 | 0.3 | GO:0005744 | mitochondrial inner membrane presequence translocase complex(GO:0005744) |
0.0 | 0.7 | GO:0001750 | photoreceptor outer segment(GO:0001750) |
0.0 | 1.2 | GO:0005882 | intermediate filament(GO:0005882) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 1.1 | GO:0052654 | branched-chain-amino-acid transaminase activity(GO:0004084) L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656) |
0.2 | 1.0 | GO:0004142 | diacylglycerol cholinephosphotransferase activity(GO:0004142) |
0.2 | 1.3 | GO:0008526 | phosphatidylinositol transporter activity(GO:0008526) |
0.2 | 0.5 | GO:0016649 | electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649) |
0.2 | 0.9 | GO:0008158 | hedgehog receptor activity(GO:0008158) |
0.1 | 0.6 | GO:0008046 | axon guidance receptor activity(GO:0008046) |
0.1 | 0.6 | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates(GO:0016838) |
0.0 | 0.4 | GO:0016176 | superoxide-generating NADPH oxidase activity(GO:0016175) superoxide-generating NADPH oxidase activator activity(GO:0016176) |
0.0 | 0.3 | GO:0015450 | P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450) |
0.0 | 0.2 | GO:0001223 | transcription coactivator binding(GO:0001223) |
0.0 | 1.2 | GO:0005164 | tumor necrosis factor receptor binding(GO:0005164) |
0.0 | 0.1 | GO:0004639 | phosphoribosylaminoimidazolesuccinocarboxamide synthase activity(GO:0004639) |
0.0 | 0.3 | GO:0005158 | insulin receptor binding(GO:0005158) |
0.0 | 0.3 | GO:0004157 | dihydropyrimidinase activity(GO:0004157) |
0.0 | 0.1 | GO:0003989 | acetyl-CoA carboxylase activity(GO:0003989) |
0.0 | 0.1 | GO:0070224 | sulfide:quinone oxidoreductase activity(GO:0070224) |
0.0 | 1.2 | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity(GO:0003755) |
0.0 | 1.3 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
0.0 | 0.5 | GO:0042577 | lipid phosphatase activity(GO:0042577) |
0.0 | 0.8 | GO:0017075 | syntaxin-1 binding(GO:0017075) |
0.0 | 0.6 | GO:0098632 | protein binding involved in cell-cell adhesion(GO:0098632) |
0.0 | 0.2 | GO:0015386 | monovalent cation:proton antiporter activity(GO:0005451) sodium:proton antiporter activity(GO:0015385) potassium:proton antiporter activity(GO:0015386) |
0.0 | 0.7 | GO:0008020 | G-protein coupled photoreceptor activity(GO:0008020) |
0.0 | 0.1 | GO:0005000 | vasopressin receptor activity(GO:0005000) |
0.0 | 0.5 | GO:0051087 | chaperone binding(GO:0051087) |
0.0 | 0.3 | GO:0005104 | fibroblast growth factor receptor binding(GO:0005104) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.4 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
0.0 | 1.1 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.0 | REACTOME SYNTHESIS OF PC | Genes involved in Synthesis of PC |
0.1 | 1.1 | REACTOME BRANCHED CHAIN AMINO ACID CATABOLISM | Genes involved in Branched-chain amino acid catabolism |
0.0 | 0.8 | REACTOME PROTEOLYTIC CLEAVAGE OF SNARE COMPLEX PROTEINS | Genes involved in Proteolytic cleavage of SNARE complex proteins |
0.0 | 0.3 | REACTOME PYRIMIDINE CATABOLISM | Genes involved in Pyrimidine catabolism |
0.0 | 1.2 | REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS | Genes involved in Association of TriC/CCT with target proteins during biosynthesis |
0.0 | 0.4 | REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS | Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits |
0.0 | 0.2 | REACTOME THE ACTIVATION OF ARYLSULFATASES | Genes involved in The activation of arylsulfatases |