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PRJNA195909:zebrafish embryo and larva development

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Results for zgc:101100

Z-value: 0.43

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Transcription factors associated with zgc:101100

Gene Symbol Gene ID Gene Info
zgc
ENSDARG00000021959 101100

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
zgc:101100dr11_v1_chr8_+_20488322_20488322-0.284.7e-01Click!

Activity profile of zgc:101100 motif

Sorted Z-values of zgc:101100 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr8_-_54077740 0.61 ENSDART00000027000
rho
rhodopsin
chr6_+_41186320 0.44 ENSDART00000025241
opn1mw2
opsin 1 (cone pigments), medium-wave-sensitive, 2
chr11_-_15090118 0.38 ENSDART00000171118
slc1a8a
solute carrier family 1 (glutamate transporter), member 8a
chr11_-_15090564 0.36 ENSDART00000162079
slc1a8a
solute carrier family 1 (glutamate transporter), member 8a
chr14_+_32838110 0.33 ENSDART00000158077
arr3b
arrestin 3b, retinal (X-arrestin)
chr5_+_11407504 0.28 ENSDART00000186723
ENSDART00000018047
zgc:112294
zgc:112294
chr8_+_23142946 0.26 ENSDART00000152933
si:ch211-196c10.13
si:ch211-196c10.13
chr17_-_51202339 0.24 ENSDART00000167117
si:ch1073-469d17.2
si:ch1073-469d17.2
chr14_+_32837914 0.24 ENSDART00000158888
arr3b
arrestin 3b, retinal (X-arrestin)
chr7_-_13882988 0.23 ENSDART00000169828
rlbp1a
retinaldehyde binding protein 1a
chr9_+_13714379 0.22 ENSDART00000017593
ENSDART00000145503
tmem237a
transmembrane protein 237a
chr3_-_28828242 0.21 ENSDART00000151445
si:ch211-76l23.4
si:ch211-76l23.4
chr9_-_29544720 0.16 ENSDART00000130317
arhgap20
Rho GTPase activating protein 20
chr10_+_17026870 0.15 ENSDART00000184529
ENSDART00000157480
CR855996.2

chr2_-_5356686 0.15 ENSDART00000124290
MFN1
mitofusin 1
chr22_-_910926 0.14 ENSDART00000180075
FP016205.1

chr24_-_7777389 0.14 ENSDART00000138541
rpgrip1
RPGR interacting protein 1
chr20_-_29475172 0.14 ENSDART00000183164
scg5
secretogranin V
chr2_-_30784198 0.14 ENSDART00000182523
ENSDART00000147355
rgs20
regulator of G protein signaling 20
chr25_+_3326885 0.13 ENSDART00000104866
ldhbb
lactate dehydrogenase Bb
chr12_+_41991635 0.13 ENSDART00000186161
ENSDART00000192510
TCERG1L
transcription elongation regulator 1 like
chr22_+_34701848 0.13 ENSDART00000082066
atpv0e2
ATPase H+ transporting V0 subunit e2
chr3_-_49566364 0.12 ENSDART00000161507
zgc:153426
zgc:153426
chr8_-_14121634 0.12 ENSDART00000184946
bgna
biglycan a
chr25_+_19041329 0.12 ENSDART00000153467
lrtm2b
leucine-rich repeats and transmembrane domains 2b
chr16_-_17188294 0.11 ENSDART00000165883
opn9
opsin 9
chr20_-_18736281 0.10 ENSDART00000142837
enpp5
ectonucleotide pyrophosphatase/phosphodiesterase 5
chr19_+_1097393 0.10 ENSDART00000168218
CABZ01111953.1

chr7_-_57933736 0.10 ENSDART00000142580
ank2b
ankyrin 2b, neuronal
chr7_-_13884610 0.09 ENSDART00000006897
rlbp1a
retinaldehyde binding protein 1a
chr8_+_2656231 0.09 ENSDART00000160833
fam102aa
family with sequence similarity 102, member Aa
chr16_+_32059785 0.09 ENSDART00000134459
si:dkey-40m6.8
si:dkey-40m6.8
chr1_+_47585700 0.09 ENSDART00000153746
ENSDART00000084457
sh3pxd2aa
SH3 and PX domains 2Aa
chr3_+_34919810 0.09 ENSDART00000055264
ca10b
carbonic anhydrase Xb
chr17_-_15149192 0.08 ENSDART00000180511
ENSDART00000103405
gch1
GTP cyclohydrolase 1
chr9_+_13685921 0.08 ENSDART00000145775
mpp4a
membrane protein, palmitoylated 4a (MAGUK p55 subfamily member 4)
chr14_-_2933185 0.07 ENSDART00000161677
ENSDART00000162446
ENSDART00000109378
si:dkey-201i24.6
si:dkey-201i24.6
chr1_+_50613868 0.07 ENSDART00000111114
HERC5
si:ch73-190m4.1
chr10_-_36738619 0.07 ENSDART00000093000
ENSDART00000157179
PLEKHB1
si:ch211-176g13.7
chr7_+_66884291 0.06 ENSDART00000187499
sbf2
SET binding factor 2
chr3_+_34220194 0.06 ENSDART00000145859
slc25a23b
solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23b
chr20_-_25436389 0.06 ENSDART00000153266
itsn2a
intersectin 2a
chr10_-_26274094 0.06 ENSDART00000108798
dchs1b
dachsous cadherin-related 1b
chr2_+_30786773 0.06 ENSDART00000019029
ENSDART00000145681
atp6v1h
ATPase H+ transporting V1 subunit H
chr7_+_66884570 0.06 ENSDART00000082664
sbf2
SET binding factor 2
chr9_-_12682848 0.05 ENSDART00000138360
myo10l3
myosin X-like 3
chr2_+_30787128 0.05 ENSDART00000189233
atp6v1h
ATPase H+ transporting V1 subunit H
chr5_+_24287927 0.05 ENSDART00000143563
zdhhc23a
zinc finger, DHHC-type containing 23a
chr1_+_41690402 0.05 ENSDART00000177298
fbxo41
F-box protein 41
chr2_-_48171441 0.05 ENSDART00000123040
pfkpb
phosphofructokinase, platelet b
chr1_-_45920632 0.05 ENSDART00000140890
pnpla6
patatin-like phospholipase domain containing 6
chr23_-_21797517 0.05 ENSDART00000110041
lrrc38a
leucine rich repeat containing 38a
chr7_-_49594995 0.04 ENSDART00000174161
ENSDART00000109147
brsk2b
BR serine/threonine kinase 2b
chr19_+_24068223 0.04 ENSDART00000141351
ENSDART00000100420
pex11b
peroxisomal biogenesis factor 11 beta
chr12_+_17042754 0.04 ENSDART00000066439
ch25h
cholesterol 25-hydroxylase
chr24_-_38079261 0.04 ENSDART00000105662
crp1
C-reactive protein 1
chr13_+_12528043 0.04 ENSDART00000057761
rrh
retinal pigment epithelium-derived rhodopsin homolog
chr18_+_49969568 0.03 ENSDART00000126916
mob2b
MOB kinase activator 2b
chr2_-_48171112 0.03 ENSDART00000156258
pfkpb
phosphofructokinase, platelet b
chr16_+_50163352 0.03 ENSDART00000153890
ENSDART00000060522
si:ch211-231m23.4
si:ch211-231m23.4
chr2_-_58075414 0.03 ENSDART00000161920
nectin4
nectin cell adhesion molecule 4
chr2_+_7192966 0.03 ENSDART00000142735
si:ch211-13f8.1
si:ch211-13f8.1
chr5_+_52067723 0.03 ENSDART00000166902
setbp1
SET binding protein 1
chr22_+_35275468 0.03 ENSDART00000189516
ENSDART00000181572
ENSDART00000165353
ENSDART00000185352
rubcn
RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein
chr13_-_36525982 0.03 ENSDART00000114744
pacs2
phosphofurin acidic cluster sorting protein 2
chr10_+_6013076 0.03 ENSDART00000167613
ENSDART00000159216
hmgcs1
3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
chr2_+_30531726 0.03 ENSDART00000146518
ankrd33bb
ankyrin repeat domain 33Bb
chr22_-_14696667 0.03 ENSDART00000180379
lrp1ba
low density lipoprotein receptor-related protein 1Ba
chr12_+_6195191 0.03 ENSDART00000043236
ENSDART00000186420
prkg1b
protein kinase, cGMP-dependent, type Ib
chr7_+_4384863 0.02 ENSDART00000042955
ENSDART00000134653
slc12a10.3
slc12a10.3 solute carrier family 12 (sodium/potassium/chloride transporters), member 10, tandem duplicate 3
chr7_-_17780048 0.02 ENSDART00000183336
si:dkey-106g10.7
si:dkey-106g10.7
chr2_+_13050225 0.02 ENSDART00000182237
BX324233.1

chr6_-_39653972 0.01 ENSDART00000155859
larp4ab
La ribonucleoprotein domain family, member 4Ab
chr22_+_5103349 0.01 ENSDART00000083474
atcaya
ataxia, cerebellar, Cayman type a
chr17_-_50010121 0.01 ENSDART00000122747
tmem30aa
transmembrane protein 30Aa
chr21_-_41369370 0.01 ENSDART00000159290
cpeb4b
cytoplasmic polyadenylation element binding protein 4b
chr17_-_2690083 0.01 ENSDART00000135374
ptpn21
protein tyrosine phosphatase, non-receptor type 21
chr6_-_59381391 0.01 ENSDART00000157066
ppp1r16b
protein phosphatase 1, regulatory subunit 16B
chr2_-_9696283 0.01 ENSDART00000165712
selenot1a
selenoprotein T, 1a
chr5_-_50748081 0.01 ENSDART00000113985
mctp1a
multiple C2 domains, transmembrane 1a
chr22_+_38164486 0.00 ENSDART00000137521
tm4sf18
transmembrane 4 L six family member 18
chr7_+_20031202 0.00 ENSDART00000052904
slc16a13
solute carrier family 16, member 13 (monocarboxylic acid transporter 13)
chr22_+_35205546 0.00 ENSDART00000189203
tsc22d2
TSC22 domain family 2
chr18_+_19975787 0.00 ENSDART00000138103
skor1b
SKI family transcriptional corepressor 1b
chr7_-_12821277 0.00 ENSDART00000091584
zgc:158785
zgc:158785

Network of associatons between targets according to the STRING database.

First level regulatory network of zgc:101100

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 GO:0016056 rhodopsin mediated signaling pathway(GO:0016056)
0.0 0.6 GO:0002031 G-protein coupled receptor internalization(GO:0002031)
0.0 0.1 GO:0046654 tetrahydrofolate biosynthetic process(GO:0046654)
0.0 0.1 GO:0036371 protein localization to T-tubule(GO:0036371)
0.0 0.1 GO:1902410 mitotic cytokinetic process(GO:1902410) mitotic cleavage furrow formation(GO:1903673)
0.0 0.1 GO:0048069 eye pigmentation(GO:0048069)
0.0 0.3 GO:0007634 optokinetic behavior(GO:0007634)
0.0 0.1 GO:0046548 retinal rod cell development(GO:0046548)
0.0 0.6 GO:0007602 phototransduction(GO:0007602)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.9 GO:0060170 ciliary membrane(GO:0060170)
0.0 0.1 GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain(GO:0000221)
0.0 0.4 GO:0035869 ciliary transition zone(GO:0035869)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 GO:0005502 11-cis retinal binding(GO:0005502)
0.0 0.1 GO:0004459 L-lactate dehydrogenase activity(GO:0004459)
0.0 0.6 GO:0008020 G-protein coupled photoreceptor activity(GO:0008020)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.6 ST MYOCYTE AD PATHWAY Myocyte Adrenergic Pathway is a specific case of the generalized Adrenergic Pathway.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.1 REACTOME OPSINS Genes involved in Opsins
0.0 0.1 REACTOME TETRAHYDROBIOPTERIN BH4 SYNTHESIS RECYCLING SALVAGE AND REGULATION Genes involved in Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation
0.0 0.1 REACTOME TRANSFERRIN ENDOCYTOSIS AND RECYCLING Genes involved in Transferrin endocytosis and recycling