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PRJNA207719: Tissue specific transcriptome profiling

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Results for arid3a+arid3b+arid3c

Z-value: 1.21

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Transcription factors associated with arid3a+arid3b+arid3c

Gene Symbol Gene ID Gene Info
arid3c
ENSDARG00000067729 AT rich interactive domain 3C (BRIGHT-like)
arid3a
ENSDARG00000070843 AT rich interactive domain 3A (BRIGHT-like)
arid3b
ENSDARG00000104034 AT rich interactive domain 3B (BRIGHT-like)
arid3c
ENSDARG00000114447 AT rich interactive domain 3C (BRIGHT-like)

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
arid3cdr11_v1_chr5_+_41322783_413227830.894.3e-02Click!
arid3bdr11_v1_chr25_-_29072162_29072162-0.662.3e-01Click!
arid3adr11_v1_chr11_+_5681762_56817620.652.4e-01Click!

Activity profile of arid3a+arid3b+arid3c motif

Sorted Z-values of arid3a+arid3b+arid3c motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr19_-_3167729 2.39 ENSDART00000110763
ENSDART00000145710
ENSDART00000074620
ENSDART00000105174
stm
starmaker
chr8_+_3820134 2.35 ENSDART00000122454
citb
citron rho-interacting serine/threonine kinase b
chr5_+_70155935 1.93 ENSDART00000165570
rgs3a
regulator of G protein signaling 3a
chr18_-_47662696 1.90 ENSDART00000184260
CABZ01073963.1

chr2_-_9489611 1.81 ENSDART00000146715
st6galnac3
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
chr1_+_7517454 1.67 ENSDART00000016139
lancl1
LanC antibiotic synthetase component C-like 1 (bacterial)
chr1_+_31112436 1.66 ENSDART00000075340
eef1a1b
eukaryotic translation elongation factor 1 alpha 1b
chr2_-_9059955 1.26 ENSDART00000022768
ak5
adenylate kinase 5
chr19_+_4139065 1.09 ENSDART00000172524
si:dkey-218f9.10
si:dkey-218f9.10
chr15_+_39096736 1.05 ENSDART00000129511
ENSDART00000014877
robo2
roundabout, axon guidance receptor, homolog 2 (Drosophila)
chr2_+_31492662 0.91 ENSDART00000123495
cacnb2b
calcium channel, voltage-dependent, beta 2b
chr23_-_24343363 0.89 ENSDART00000166392
fam131c
family with sequence similarity 131, member C
chr19_-_7406933 0.85 ENSDART00000151137
oxr1b
oxidation resistance 1b
chr15_+_45994123 0.77 ENSDART00000124704
lrfn1
leucine rich repeat and fibronectin type III domain containing 1
chr8_+_7144066 0.75 ENSDART00000146306
slc6a6a
solute carrier family 6 (neurotransmitter transporter), member 6a
chr12_+_7445595 0.72 ENSDART00000103536
ENSDART00000152524
phyhiplb
phytanoyl-CoA 2-hydroxylase interacting protein-like b
chr20_+_52389858 0.72 ENSDART00000185863
ENSDART00000166651
arhgap39
Rho GTPase activating protein 39
chr4_+_14660769 0.72 ENSDART00000168152
ENSDART00000013990
ENSDART00000079987
abcc9
ATP-binding cassette, sub-family C (CFTR/MRP), member 9
chr12_+_8168272 0.72 ENSDART00000054092
arid5b
AT-rich interaction domain 5B
chr5_-_12407194 0.72 ENSDART00000125291
ksr2
kinase suppressor of ras 2
chr10_-_2522588 0.69 ENSDART00000081926
CU856539.1

chr22_-_15562933 0.68 ENSDART00000141528
ankmy1
ankyrin repeat and MYND domain containing 1
chr4_+_9669717 0.68 ENSDART00000004604
si:dkey-153k10.9
si:dkey-153k10.9
chr16_-_13730152 0.67 ENSDART00000138772
ttyh1
tweety family member 1
chr19_-_11208782 0.66 ENSDART00000044426
ENSDART00000189754
si:dkey-240h12.4
si:dkey-240h12.4
chr19_-_26869103 0.65 ENSDART00000089699
prrt1
proline-rich transmembrane protein 1
chr21_+_13861589 0.62 ENSDART00000015629
ENSDART00000171306
stxbp1a
syntaxin binding protein 1a
chr21_+_3093419 0.61 ENSDART00000162520
SHC3
SHC adaptor protein 3
chr18_+_6126506 0.61 ENSDART00000125725
si:ch1073-390k14.1
si:ch1073-390k14.1
chr10_+_45089820 0.58 ENSDART00000175481
camk2b2
calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 2
chr8_+_31717175 0.57 ENSDART00000013434
oxct1a
3-oxoacid CoA transferase 1a
chr16_-_55028740 0.56 ENSDART00000156368
ENSDART00000161704
zgc:114181
zgc:114181
chr19_+_24872159 0.56 ENSDART00000158490
si:ch211-195b13.1
si:ch211-195b13.1
chr17_-_16965809 0.55 ENSDART00000153697
nrxn3a
neurexin 3a
chr16_-_8927425 0.55 ENSDART00000000382
triob
trio Rho guanine nucleotide exchange factor b
chr8_+_31716872 0.54 ENSDART00000161121
oxct1a
3-oxoacid CoA transferase 1a
chr5_+_58492699 0.54 ENSDART00000181584
FQ378016.1

chr13_+_27951688 0.53 ENSDART00000050303
b3gat2
beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
chr22_+_12366516 0.53 ENSDART00000157802
r3hdm1
R3H domain containing 1
chr11_+_39672874 0.53 ENSDART00000046663
ENSDART00000157659
camta1b
calmodulin binding transcription activator 1b
chr17_+_22311413 0.51 ENSDART00000151929
slc8a1b
solute carrier family 8 (sodium/calcium exchanger), member 1b
chr20_+_50852356 0.50 ENSDART00000167517
ENSDART00000168396
gphnb
gephyrin b
chr11_-_3343463 0.50 ENSDART00000066177
tuba2
tubulin, alpha 2
chr12_+_3022882 0.47 ENSDART00000122905
rac3b
Rac family small GTPase 3b
chr19_-_3240605 0.46 ENSDART00000105168
si:ch211-133n4.4
si:ch211-133n4.4
chr6_-_12275836 0.46 ENSDART00000189980
pkp4
plakophilin 4
chr12_+_3871452 0.46 ENSDART00000066546
nif3l1
NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)
chr25_+_14165447 0.45 ENSDART00000145387
shank2
SH3 and multiple ankyrin repeat domains 2
chr8_-_17067364 0.44 ENSDART00000132687
rab3c
RAB3C, member RAS oncogene family
chr10_+_44584614 0.43 ENSDART00000163523
sez6l
seizure related 6 homolog (mouse)-like
chr25_-_6420800 0.43 ENSDART00000153768
ptpn9a
protein tyrosine phosphatase, non-receptor type 9, a
chr2_+_34967022 0.42 ENSDART00000134926
astn1
astrotactin 1
chr12_+_47698356 0.42 ENSDART00000112010
lzts2b
leucine zipper, putative tumor suppressor 2b
chr18_+_39416357 0.42 ENSDART00000183174
ENSDART00000127955
ENSDART00000171303
lysmd2
LysM, putative peptidoglycan-binding, domain containing 2
chr3_-_18711288 0.41 ENSDART00000183885
grid2ipa
glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, a
chr2_+_3472832 0.41 ENSDART00000115278
cx47.1
connexin 47.1
chr3_-_21280373 0.41 ENSDART00000003939
syngr1a
synaptogyrin 1a
chr17_-_36936649 0.40 ENSDART00000145236
dpysl5a
dihydropyrimidinase-like 5a
chr17_+_2063693 0.40 ENSDART00000182349
zgc:162989
zgc:162989
chr7_+_60551133 0.40 ENSDART00000148038
lrfn4b
leucine rich repeat and fibronectin type III domain containing 4b
chr22_-_26945493 0.40 ENSDART00000077411
cxcl12b
chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1)
chr25_+_37126921 0.39 ENSDART00000124331
si:ch1073-174d20.1
si:ch1073-174d20.1
chr8_-_34052019 0.38 ENSDART00000040126
ENSDART00000159208
ENSDART00000048994
ENSDART00000098822
pbx3b
pre-B-cell leukemia homeobox 3b
chr6_+_54221654 0.38 ENSDART00000128456
pacsin1b
protein kinase C and casein kinase substrate in neurons 1b
chr10_-_34870667 0.37 ENSDART00000161272
dclk1a
doublecortin-like kinase 1a
chr6_-_10780698 0.37 ENSDART00000151714
gpr155b
G protein-coupled receptor 155b
chr16_-_29458806 0.36 ENSDART00000047931
lingo4b
leucine rich repeat and Ig domain containing 4b
chr6_+_58698475 0.36 ENSDART00000056138
igsf8
immunoglobulin superfamily, member 8
chr14_+_28281744 0.35 ENSDART00000173292
mid2
midline 2
chr20_+_54383838 0.35 ENSDART00000157737
lrfn5b
leucine rich repeat and fibronectin type III domain containing 5b
chr9_+_2574122 0.35 ENSDART00000166326
ENSDART00000191822
CIR1
si:ch73-167c12.2
chr19_-_34063567 0.34 ENSDART00000157815
ENSDART00000183907
elmo1
engulfment and cell motility 1 (ced-12 homolog, C. elegans)
chr2_-_1548330 0.34 ENSDART00000082155
ENSDART00000108481
ENSDART00000111272
dab1b
Dab, reelin signal transducer, homolog 1b (Drosophila)
chr16_+_36126310 0.34 ENSDART00000166040
ENSDART00000189802
sh3bp5b
SH3-domain binding protein 5b (BTK-associated)
chr15_+_37197494 0.33 ENSDART00000166203
aplp1
amyloid beta (A4) precursor-like protein 1
chr22_+_5103349 0.33 ENSDART00000083474
atcaya
ataxia, cerebellar, Cayman type a
chr19_-_12145765 0.33 ENSDART00000032474
pabpc1b
poly A binding protein, cytoplasmic 1 b
chr14_+_46342882 0.33 ENSDART00000193707
ENSDART00000060577
tmem33
transmembrane protein 33
chr3_-_21037840 0.32 ENSDART00000002393
rundc3aa
RUN domain containing 3Aa
chr5_+_69650148 0.32 ENSDART00000097244
gtf2h3
general transcription factor IIH, polypeptide 3
chr22_+_27090136 0.31 ENSDART00000136770
si:dkey-246e1.3
si:dkey-246e1.3
chr7_+_9189547 0.31 ENSDART00000169783
pcsk6
proprotein convertase subtilisin/kexin type 6
chr9_+_34641237 0.31 ENSDART00000133996
shox
short stature homeobox
chr16_+_14812585 0.30 ENSDART00000134087
col14a1a
collagen, type XIV, alpha 1a
chr4_-_20027571 0.29 ENSDART00000003420
drd4-rs
dopamine receptor D4 related sequence
chr11_+_41459408 0.29 ENSDART00000182285
park7
parkinson protein 7
chr10_-_31104983 0.29 ENSDART00000186941
pknox2
pbx/knotted 1 homeobox 2
chr22_+_18389271 0.29 ENSDART00000088270
yjefn3
YjeF N-terminal domain containing 3
chr5_-_42180205 0.29 ENSDART00000145247
fam222ba
family with sequence similarity 222, member Ba
chr14_+_45028062 0.28 ENSDART00000184717
ENSDART00000185481
ATP8A1
ATPase phospholipid transporting 8A1
chr24_-_37484123 0.28 ENSDART00000111623
cluap1
clusterin associated protein 1
chr19_+_23932259 0.28 ENSDART00000139040
si:dkey-222b8.1
si:dkey-222b8.1
chr1_+_9886991 0.28 ENSDART00000135702
rgs11
regulator of G protein signaling 11
chr25_+_34407529 0.28 ENSDART00000156751
OTUD7A
si:dkey-37f18.2
chr18_-_19103929 0.28 ENSDART00000188370
ENSDART00000177621
dennd4a
DENN/MADD domain containing 4A
chr19_-_12145390 0.28 ENSDART00000143087
pabpc1b
poly A binding protein, cytoplasmic 1 b
chr2_+_49232559 0.27 ENSDART00000154285
ENSDART00000175147
sema6ba
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba
chr16_+_32014552 0.27 ENSDART00000047570
mboat7
membrane bound O-acyltransferase domain containing 7
chr10_-_20706109 0.27 ENSDART00000124751
kcnip3b
Kv channel interacting protein 3b, calsenilin
chr9_+_34380299 0.27 ENSDART00000131705
lamp1
lysosomal-associated membrane protein 1
chr14_-_12051610 0.27 ENSDART00000193741
ENSDART00000029366
zgc:66447
zgc:66447
chr6_-_1865323 0.27 ENSDART00000155775
dlgap4b
discs, large (Drosophila) homolog-associated protein 4b
chr7_+_57866292 0.26 ENSDART00000138757
camk2d1
calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1
chr8_+_1651821 0.26 ENSDART00000060865
ENSDART00000186304
rasal1b
RAS protein activator like 1b (GAP1 like)
chr20_+_18943406 0.25 ENSDART00000193590
mtmr9
myotubularin related protein 9
chr18_+_39074139 0.25 ENSDART00000142390
gnb5b
guanine nucleotide binding protein (G protein), beta 5b
chr21_+_10794914 0.25 ENSDART00000084035
znf532
zinc finger protein 532
chr13_-_41546779 0.25 ENSDART00000163331
pcdh15a
protocadherin-related 15a
chr3_+_34919810 0.24 ENSDART00000055264
ca10b
carbonic anhydrase Xb
chr8_+_104114 0.24 ENSDART00000172101
sncaip
synuclein, alpha interacting protein
chr6_-_33871055 0.24 ENSDART00000115409
mast2
microtubule associated serine/threonine kinase 2
chr18_+_11858397 0.24 ENSDART00000133762
tmtc2b
transmembrane and tetratricopeptide repeat containing 2b
chr3_-_41995321 0.23 ENSDART00000192277
ttyh3a
tweety family member 3a
chr11_-_43200994 0.23 ENSDART00000164700
sptbn1
spectrin, beta, non-erythrocytic 1
chr14_+_5936996 0.23 ENSDART00000097144
ENSDART00000126777
kctd8
potassium channel tetramerization domain containing 8
chr2_+_33457310 0.23 ENSDART00000056657
zgc:113531
zgc:113531
chr25_-_518656 0.23 ENSDART00000156421
myo9ab
myosin IXAb
chr12_+_38774860 0.23 ENSDART00000130371
kif19
kinesin family member 19
chr1_+_59293873 0.23 ENSDART00000168036
rdh8b
retinol dehydrogenase 8b
chr20_-_28638871 0.22 ENSDART00000184779
rgs6
regulator of G protein signaling 6
chr13_+_18371208 0.22 ENSDART00000138172
ccar1
cell division cycle and apoptosis regulator 1
chr6_+_11989537 0.22 ENSDART00000190817
baz2ba
bromodomain adjacent to zinc finger domain, 2Ba
chr15_+_42285643 0.21 ENSDART00000152731
scaf4b
SR-related CTD-associated factor 4b
chr21_+_40695345 0.21 ENSDART00000143594
ccdc82
coiled-coil domain containing 82
chr10_+_22510280 0.21 ENSDART00000109070
ENSDART00000182002
ENSDART00000192852
gigyf1b
GRB10 interacting GYF protein 1b
chr6_-_16394528 0.21 ENSDART00000089445
agap1
ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
chr15_+_36941490 0.21 ENSDART00000172664
kirrel3l
kirre like nephrin family adhesion molecule 3, like
chr8_-_38506339 0.21 ENSDART00000054558
ENSDART00000141623
foxb2
forkhead box B2
chr9_+_33158191 0.21 ENSDART00000180786
dopey2
dopey family member 2
chr3_+_60721342 0.21 ENSDART00000157772
foxj1a
forkhead box J1a
chr14_-_47391084 0.21 ENSDART00000159608
fstl5
follistatin-like 5
chr14_+_25986895 0.21 ENSDART00000149087
slc36a1
solute carrier family 36 (proton/amino acid symporter), member 1
chr7_+_11197940 0.20 ENSDART00000081346
cemip
cell migration inducing protein, hyaluronan binding
chr2_+_25657958 0.20 ENSDART00000161407
tnika
TRAF2 and NCK interacting kinase a
chr23_+_21544227 0.20 ENSDART00000140253
arhgef10lb
Rho guanine nucleotide exchange factor (GEF) 10-like b
chr9_+_3429662 0.20 ENSDART00000160977
ENSDART00000114168
ENSDART00000082153
CU469503.1
itga6a

integrin, alpha 6a
chr6_+_49551614 0.20 ENSDART00000022581
rab22a
RAB22A, member RAS oncogene family
chr13_+_6092135 0.20 ENSDART00000162738
fam120b
family with sequence similarity 120B
chr4_-_5019113 0.20 ENSDART00000189321
ENSDART00000081990
strip2
striatin interacting protein 2
chr4_-_75157223 0.19 ENSDART00000174127
CABZ01066312.1

chr10_+_15967643 0.19 ENSDART00000136709
apbb1
amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)
chr2_-_22530969 0.19 ENSDART00000159641
znf644a
zinc finger protein 644a
chr11_-_889845 0.19 ENSDART00000162152
atg7
ATG7 autophagy related 7 homolog (S. cerevisiae)
chr1_-_1627487 0.19 ENSDART00000166094
clic6
chloride intracellular channel 6
chr11_+_14199802 0.19 ENSDART00000102520
ENSDART00000133172
palm1a
paralemmin 1a
chr6_+_13726844 0.18 ENSDART00000055833
wnt6a
wingless-type MMTV integration site family, member 6a
chr18_+_17827149 0.18 ENSDART00000190237
ENSDART00000189345
ZNF423
si:ch211-216l23.1
chr4_+_25912308 0.18 ENSDART00000167845
ENSDART00000136927
vezt
vezatin, adherens junctions transmembrane protein
chr21_-_38619305 0.18 ENSDART00000139178
slc25a14
solute carrier family 25 (mitochondrial carrier, brain), member 14
chr2_-_52365251 0.18 ENSDART00000097716
tle2c
transducin like enhancer of split 2c
chr13_+_4883377 0.18 ENSDART00000181530
ENSDART00000092521
micu1
mitochondrial calcium uptake 1
chr4_-_74892355 0.18 ENSDART00000188725
PHF21B
PHD finger protein 21B
chr3_+_62339264 0.18 ENSDART00000174569
BX470259.3

chr22_+_39054012 0.18 ENSDART00000191326
ip6k1
inositol hexakisphosphate kinase 1
chr15_-_33807758 0.18 ENSDART00000158445
pds5b
PDS5 cohesin associated factor B
chr10_-_20706270 0.17 ENSDART00000166540
kcnip3b
Kv channel interacting protein 3b, calsenilin
chr8_+_28358161 0.17 ENSDART00000062682
adipor1b
adiponectin receptor 1b
chr8_-_29930821 0.17 ENSDART00000125173
ercc6l2
excision repair cross-complementation group 6-like 2
chr13_-_17943135 0.17 ENSDART00000176027
march8
membrane-associated ring finger (C3HC4) 8
chr15_+_33843596 0.17 ENSDART00000169037
inpp5ka
inositol polyphosphate-5-phosphatase Ka
chr16_-_36979592 0.17 ENSDART00000168443
snrnp48
small nuclear ribonucleoprotein 48 (U11/U12)
chr8_-_2100808 0.16 ENSDART00000123804
cltcl1
clathrin, heavy chain-like 1
chr18_-_16885362 0.16 ENSDART00000132778
swap70b
switching B cell complex subunit SWAP70b
chr4_-_75158035 0.16 ENSDART00000174353
CABZ01066312.1

chr4_-_2440175 0.16 ENSDART00000058059
OSBPL8
oxysterol binding protein like 8
chr3_+_60828813 0.16 ENSDART00000128260
CABZ01087514.1

chr5_+_5398966 0.16 ENSDART00000139553
mapkap1
mitogen-activated protein kinase associated protein 1
chr11_-_26832685 0.16 ENSDART00000153519
iqsec1b
IQ motif and Sec7 domain 1b
chr21_-_32487061 0.16 ENSDART00000114359
ENSDART00000131591
ENSDART00000131477
si:dkeyp-72g9.4
si:dkeyp-72g9.4
chr5_+_50371951 0.16 ENSDART00000184488
ENSDART00000171295
slf1
SMC5-SMC6 complex localization factor 1
chr4_-_25911609 0.16 ENSDART00000186958
ENSDART00000175487
fgd6
FYVE, RhoGEF and PH domain containing 6
chr11_+_2687395 0.15 ENSDART00000082510
b3galt6
UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6
chr18_-_22414565 0.15 ENSDART00000079158
tmem170a
transmembrane protein 170A
chr19_-_46018152 0.15 ENSDART00000159206
krit1
KRIT1, ankyrin repeat containing
chr12_+_14556092 0.15 ENSDART00000115237
becn1
beclin 1, autophagy related
chr5_+_19320554 0.15 ENSDART00000165119
rusc2
RUN and SH3 domain containing 2
chr21_-_3606539 0.15 ENSDART00000062418
dym
dymeclin
chr24_-_3426620 0.15 ENSDART00000184346
nck1b
NCK adaptor protein 1b
chr25_+_34407740 0.15 ENSDART00000012677
OTUD7A
si:dkey-37f18.2
chr8_+_9715010 0.15 ENSDART00000139414
gripap1
GRIP1 associated protein 1
chr12_-_18414536 0.15 ENSDART00000132956
ENSDART00000078724
atpaf2
ATP synthase mitochondrial F1 complex assembly factor 2
chr19_+_15521997 0.15 ENSDART00000003164
ppp1r8a
protein phosphatase 1, regulatory subunit 8a
chr4_-_72296520 0.15 ENSDART00000182638
si:cabz01071911.3
si:cabz01071911.3
chr9_+_33009284 0.15 ENSDART00000036926
vangl1
VANGL planar cell polarity protein 1
chr23_-_20051369 0.14 ENSDART00000049836
bgnb
biglycan b
chr25_+_10762016 0.14 ENSDART00000131231
ap3s2
adaptor-related protein complex 3, sigma 2 subunit
chr3_+_24511959 0.14 ENSDART00000133898
dnal4a
dynein, axonemal, light chain 4a
chr11_+_24819324 0.14 ENSDART00000184549
kdm5ba
lysine (K)-specific demethylase 5Ba
chr13_-_5978433 0.14 ENSDART00000102555
actr2b
ARP2 actin related protein 2b homolog
chr12_-_13650344 0.14 ENSDART00000124364
ENSDART00000124638
ENSDART00000171929
stat5b
signal transducer and activator of transcription 5b
chr12_-_34258384 0.13 ENSDART00000109196
pgs1
phosphatidylglycerophosphate synthase 1
chr17_-_7060477 0.13 ENSDART00000081797
sash1b
SAM and SH3 domain containing 1b
chr18_-_17000842 0.13 ENSDART00000079832
tph2
tryptophan hydroxylase 2 (tryptophan 5-monooxygenase)
chr4_-_55178568 0.13 ENSDART00000165288
znf1039
zinc finger protein 1039
chr21_+_45758498 0.13 ENSDART00000162548
h2afy
H2A histone family, member Y
chr12_-_19346678 0.13 ENSDART00000044860
maff
v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F
chr15_-_1733235 0.13 ENSDART00000023153
ENSDART00000154668
rabgef1l
RAB guanine nucleotide exchange factor (GEF) 1, like
chr17_-_18797245 0.13 ENSDART00000045991
vrk1
vaccinia related kinase 1
chr21_+_34976600 0.13 ENSDART00000191672
ENSDART00000139635
rbm11
RNA binding motif protein 11
chr4_+_23127284 0.13 ENSDART00000122675
mdm2
MDM2 oncogene, E3 ubiquitin protein ligase

Network of associatons between targets according to the STRING database.

First level regulatory network of arid3a+arid3b+arid3c

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.9 GO:0008591 regulation of Wnt signaling pathway, calcium modulating pathway(GO:0008591) negative regulation of non-canonical Wnt signaling pathway(GO:2000051)
0.3 2.4 GO:0045299 otolith mineralization(GO:0045299)
0.2 1.1 GO:0046952 ketone body catabolic process(GO:0046952)
0.2 0.5 GO:0042040 establishment of synaptic specificity at neuromuscular junction(GO:0007529) molybdenum incorporation into molybdenum-molybdopterin complex(GO:0018315) metal incorporation into metallo-molybdopterin complex(GO:0042040) glycine receptor clustering(GO:0072579)
0.1 1.8 GO:0001574 ganglioside biosynthetic process(GO:0001574)
0.1 1.1 GO:0050975 sensory perception of touch(GO:0050975)
0.1 0.4 GO:0021730 trigeminal sensory nucleus development(GO:0021730)
0.1 0.3 GO:2000378 negative regulation of reactive oxygen species metabolic process(GO:2000378)
0.1 0.7 GO:0060612 adipose tissue development(GO:0060612)
0.1 0.4 GO:0098529 neuromuscular junction development, skeletal muscle fiber(GO:0098529)
0.1 0.2 GO:0043416 regulation of skeletal muscle tissue regeneration(GO:0043416)
0.1 0.3 GO:0010874 regulation of cholesterol efflux(GO:0010874)
0.1 0.2 GO:0015808 L-alanine transport(GO:0015808) proline transport(GO:0015824)
0.1 0.3 GO:0036149 phosphatidylinositol acyl-chain remodeling(GO:0036149)
0.1 0.4 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.1 0.3 GO:0010752 regulation of cGMP-mediated signaling(GO:0010752)
0.1 0.4 GO:0051013 microtubule severing(GO:0051013)
0.1 0.2 GO:0030857 negative regulation of epithelial cell differentiation(GO:0030857) regulation of endothelial cell differentiation(GO:0045601)
0.0 0.2 GO:0032615 interleukin-12 production(GO:0032615) regulation of interleukin-12 production(GO:0032655)
0.0 0.1 GO:0032049 phosphatidylglycerol biosynthetic process(GO:0006655) cardiolipin biosynthetic process(GO:0032049)
0.0 0.3 GO:0097477 spinal cord motor neuron migration(GO:0097476) lateral motor column neuron migration(GO:0097477)
0.0 0.2 GO:0002495 antigen processing and presentation of peptide antigen via MHC class II(GO:0002495)
0.0 0.2 GO:1902019 regulation of cilium movement involved in cell motility(GO:0060295) regulation of cilium beat frequency involved in ciliary motility(GO:0060296) regulation of cilium-dependent cell motility(GO:1902019)
0.0 0.3 GO:1901339 regulation of store-operated calcium channel activity(GO:1901339)
0.0 0.1 GO:0034214 protein hexamerization(GO:0034214) mitotic spindle disassembly(GO:0051228) spindle disassembly(GO:0051230)
0.0 0.2 GO:0099563 modification of synaptic structure(GO:0099563)
0.0 0.2 GO:0070272 proton-transporting ATP synthase complex assembly(GO:0043461) proton-transporting ATP synthase complex biogenesis(GO:0070272)
0.0 2.3 GO:0018107 peptidyl-threonine phosphorylation(GO:0018107)
0.0 0.2 GO:0015744 thiosulfate transport(GO:0015709) oxaloacetate transport(GO:0015729) malate transport(GO:0015743) succinate transport(GO:0015744) succinate transmembrane transport(GO:0071422) malate transmembrane transport(GO:0071423)
0.0 0.2 GO:0097355 protein localization to heterochromatin(GO:0097355)
0.0 0.1 GO:0021611 facial nerve formation(GO:0021611)
0.0 0.2 GO:0006703 estrogen biosynthetic process(GO:0006703)
0.0 0.1 GO:0048308 organelle inheritance(GO:0048308) Golgi inheritance(GO:0048313)
0.0 0.3 GO:0006798 polyphosphate metabolic process(GO:0006797) polyphosphate catabolic process(GO:0006798)
0.0 1.2 GO:1901385 regulation of voltage-gated calcium channel activity(GO:1901385)
0.0 0.2 GO:0051561 positive regulation of mitochondrial calcium ion concentration(GO:0051561)
0.0 0.6 GO:0043153 entrainment of circadian clock by photoperiod(GO:0043153)
0.0 0.3 GO:0050732 negative regulation of peptidyl-tyrosine phosphorylation(GO:0050732) negative regulation of protein tyrosine kinase activity(GO:0061099)
0.0 0.1 GO:1903358 regulation of Golgi organization(GO:1903358)
0.0 0.2 GO:0048714 positive regulation of glial cell differentiation(GO:0045687) positive regulation of oligodendrocyte differentiation(GO:0048714)
0.0 0.2 GO:0090133 establishment or maintenance of cytoskeleton polarity(GO:0030952) mesendoderm migration(GO:0090133) cell migration involved in mesendoderm migration(GO:0090134)
0.0 0.5 GO:0032467 positive regulation of cytokinesis(GO:0032467)
0.0 0.5 GO:0098703 calcium ion import across plasma membrane(GO:0098703) calcium ion import into cell(GO:1990035)
0.0 0.1 GO:1904036 negative regulation of epithelial cell apoptotic process(GO:1904036)
0.0 1.1 GO:0006904 vesicle docking involved in exocytosis(GO:0006904)
0.0 0.1 GO:0044108 calcitriol biosynthetic process from calciol(GO:0036378) vitamin D biosynthetic process(GO:0042368) cellular alcohol metabolic process(GO:0044107) cellular alcohol biosynthetic process(GO:0044108)
0.0 0.7 GO:0072348 sulfur compound transport(GO:0072348)
0.0 0.1 GO:2000582 positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.0 0.1 GO:0060049 regulation of protein glycosylation(GO:0060049)
0.0 0.1 GO:0060397 JAK-STAT cascade involved in growth hormone signaling pathway(GO:0060397)
0.0 0.4 GO:0006208 pyrimidine nucleobase catabolic process(GO:0006208)
0.0 0.1 GO:1901162 serotonin biosynthetic process(GO:0042427) primary amino compound biosynthetic process(GO:1901162)
0.0 0.1 GO:0061469 regulation of type B pancreatic cell proliferation(GO:0061469)
0.0 0.5 GO:0021654 rhombomere boundary formation(GO:0021654)
0.0 0.3 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.0 0.1 GO:0034421 post-translational protein acetylation(GO:0034421)
0.0 0.3 GO:0016486 peptide hormone processing(GO:0016486)
0.0 0.1 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.0 0.1 GO:0031087 nuclear-transcribed mRNA catabolic process, deadenylation-independent decay(GO:0031086) deadenylation-independent decapping of nuclear-transcribed mRNA(GO:0031087)
0.0 0.4 GO:0060088 auditory receptor cell stereocilium organization(GO:0060088)
0.0 0.1 GO:1905168 positive regulation of double-strand break repair via homologous recombination(GO:1905168)
0.0 0.1 GO:0000448 cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000448)
0.0 0.4 GO:0050650 chondroitin sulfate proteoglycan biosynthetic process(GO:0050650)
0.0 1.2 GO:0006414 translational elongation(GO:0006414)
0.0 0.1 GO:0045604 regulation of epidermal cell differentiation(GO:0045604)
0.0 0.3 GO:0032483 regulation of Rab protein signal transduction(GO:0032483)
0.0 0.1 GO:0010847 regulation of chromatin assembly(GO:0010847)
0.0 0.2 GO:2000781 positive regulation of double-strand break repair(GO:2000781)
0.0 0.2 GO:0033211 adiponectin-activated signaling pathway(GO:0033211)
0.0 0.6 GO:0035118 embryonic pectoral fin morphogenesis(GO:0035118)
0.0 0.3 GO:0098962 regulation of postsynaptic neurotransmitter receptor activity(GO:0098962)
0.0 0.2 GO:0007158 neuron cell-cell adhesion(GO:0007158)
0.0 0.2 GO:0071501 response to sterol depletion(GO:0006991) SREBP signaling pathway(GO:0032933) cellular response to sterol depletion(GO:0071501)
0.0 0.1 GO:0060282 positive regulation of oocyte development(GO:0060282)
0.0 1.2 GO:0009142 nucleoside triphosphate biosynthetic process(GO:0009142)
0.0 0.1 GO:0045721 negative regulation of gluconeogenesis(GO:0045721)
0.0 0.2 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.0 0.1 GO:0003261 cardiac muscle progenitor cell migration to the midline involved in heart field formation(GO:0003261)
0.0 0.1 GO:1900145 nodal signaling pathway involved in determination of left/right asymmetry(GO:0038107) regulation of nodal signaling pathway involved in determination of left/right asymmetry(GO:1900145)
0.0 0.2 GO:0055117 regulation of cardiac muscle contraction(GO:0055117)
0.0 0.3 GO:0043249 erythrocyte maturation(GO:0043249)
0.0 0.3 GO:0010507 negative regulation of autophagy(GO:0010507)
0.0 0.2 GO:0072176 pronephric duct development(GO:0039022) nephric duct development(GO:0072176)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.7 GO:0005790 smooth endoplasmic reticulum(GO:0005790)
0.1 0.3 GO:0044233 ER-mitochondrion membrane contact site(GO:0044233)
0.0 0.2 GO:0008091 spectrin(GO:0008091)
0.0 0.3 GO:0000439 core TFIIH complex(GO:0000439)
0.0 0.3 GO:0032045 guanyl-nucleotide exchange factor complex(GO:0032045)
0.0 0.3 GO:0005614 interstitial matrix(GO:0005614)
0.0 0.2 GO:0071439 clathrin complex(GO:0071439)
0.0 0.2 GO:0034272 phosphatidylinositol 3-kinase complex, class III, type I(GO:0034271) phosphatidylinositol 3-kinase complex, class III, type II(GO:0034272)
0.0 0.1 GO:0090443 FAR/SIN/STRIPAK complex(GO:0090443)
0.0 0.2 GO:1990726 Lsm1-7-Pat1 complex(GO:1990726)
0.0 0.2 GO:0098837 postsynaptic recycling endosome(GO:0098837)
0.0 0.1 GO:0042584 chromaffin granule membrane(GO:0042584)
0.0 0.1 GO:0031501 mannosyltransferase complex(GO:0031501)
0.0 0.4 GO:0000407 pre-autophagosomal structure(GO:0000407)
0.0 0.3 GO:0030992 intraciliary transport particle B(GO:0030992)
0.0 0.2 GO:1990246 uniplex complex(GO:1990246)
0.0 0.4 GO:0031594 neuromuscular junction(GO:0031594)
0.0 0.1 GO:0000126 transcription factor TFIIIB complex(GO:0000126)
0.0 0.3 GO:0032420 stereocilium(GO:0032420)
0.0 0.1 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.0 0.1 GO:0035145 exon-exon junction complex(GO:0035145)
0.0 0.5 GO:0030496 midbody(GO:0030496)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.7 GO:0043295 glutathione binding(GO:0043295)
0.2 1.8 GO:0001665 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity(GO:0001665)
0.2 1.1 GO:0008260 3-oxoacid CoA-transferase activity(GO:0008260)
0.2 0.5 GO:0061599 molybdopterin adenylyltransferase activity(GO:0061598) molybdopterin molybdotransferase activity(GO:0061599)
0.1 0.7 GO:0008281 sulfonylurea receptor activity(GO:0008281)
0.1 0.5 GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018)
0.1 0.9 GO:0072320 volume-sensitive chloride channel activity(GO:0072320)
0.1 0.4 GO:0019778 Atg12 activating enzyme activity(GO:0019778) Atg8 activating enzyme activity(GO:0019779)
0.1 0.5 GO:0004865 protein serine/threonine phosphatase inhibitor activity(GO:0004865)
0.1 0.6 GO:0016805 dipeptidase activity(GO:0016805)
0.1 0.2 GO:0047035 testosterone dehydrogenase (NAD+) activity(GO:0047035)
0.1 0.7 GO:0004687 myosin light chain kinase activity(GO:0004687)
0.0 1.3 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.0 0.2 GO:0015193 L-alanine transmembrane transporter activity(GO:0015180) L-proline transmembrane transporter activity(GO:0015193) alanine transmembrane transporter activity(GO:0022858)
0.0 0.5 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
0.0 1.7 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 0.2 GO:0015140 thiosulfate transmembrane transporter activity(GO:0015117) oxaloacetate transmembrane transporter activity(GO:0015131) malate transmembrane transporter activity(GO:0015140)
0.0 0.4 GO:0004157 dihydropyrimidinase activity(GO:0004157)
0.0 0.3 GO:0004309 exopolyphosphatase activity(GO:0004309)
0.0 0.9 GO:0008331 high voltage-gated calcium channel activity(GO:0008331)
0.0 0.1 GO:0048487 beta-tubulin binding(GO:0048487)
0.0 0.2 GO:0016312 inositol bisphosphate phosphatase activity(GO:0016312)
0.0 0.1 GO:0004510 tryptophan 5-monooxygenase activity(GO:0004510)
0.0 0.1 GO:0004689 phosphorylase kinase activity(GO:0004689)
0.0 0.1 GO:0030343 vitamin D3 25-hydroxylase activity(GO:0030343) cholesterol 26-hydroxylase activity(GO:0031073)
0.0 0.7 GO:1901682 sulfur compound transmembrane transporter activity(GO:1901682)
0.0 0.2 GO:0034647 histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.0 0.3 GO:0001591 dopamine neurotransmitter receptor activity, coupled via Gi/Go(GO:0001591)
0.0 0.8 GO:0004683 calmodulin-dependent protein kinase activity(GO:0004683)
0.0 0.4 GO:0042056 chemoattractant activity(GO:0042056)
0.0 0.1 GO:0005017 platelet-derived growth factor-activated receptor activity(GO:0005017) platelet-derived growth factor binding(GO:0048407)
0.0 0.2 GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity(GO:0004169)
0.0 0.3 GO:0031682 G-protein gamma-subunit binding(GO:0031682)
0.0 0.1 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.0 0.6 GO:0017075 syntaxin-1 binding(GO:0017075)
0.0 0.4 GO:0005154 epidermal growth factor receptor binding(GO:0005154)
0.0 0.1 GO:0000995 transcription factor activity, core RNA polymerase III binding(GO:0000995)
0.0 0.0 GO:1990174 phosphodiesterase decapping endonuclease activity(GO:1990174)
0.0 0.3 GO:0071617 lysophospholipid acyltransferase activity(GO:0071617)
0.0 0.3 GO:0019210 protein kinase inhibitor activity(GO:0004860) kinase inhibitor activity(GO:0019210)
0.0 0.1 GO:0001609 G-protein coupled adenosine receptor activity(GO:0001609)
0.0 0.3 GO:0016854 racemase and epimerase activity(GO:0016854)
0.0 0.2 GO:0032051 clathrin light chain binding(GO:0032051)
0.0 0.1 GO:0051731 polynucleotide 5'-hydroxyl-kinase activity(GO:0051731)
0.0 0.2 GO:0000828 inositol hexakisphosphate kinase activity(GO:0000828)
0.0 0.6 GO:0071949 FAD binding(GO:0071949)
0.0 0.1 GO:0001042 RNA polymerase I core binding(GO:0001042)
0.0 0.1 GO:0004376 glycolipid mannosyltransferase activity(GO:0004376)
0.0 0.6 GO:0005200 structural constituent of cytoskeleton(GO:0005200)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.4 PID INTEGRIN A4B1 PATHWAY Alpha4 beta1 integrin signaling events
0.0 0.5 PID ALPHA SYNUCLEIN PATHWAY Alpha-synuclein signaling
0.0 0.1 PID AR NONGENOMIC PATHWAY Nongenotropic Androgen signaling
0.0 0.3 PID IL8 CXCR2 PATHWAY IL8- and CXCR2-mediated signaling events
0.0 0.1 PID IL5 PATHWAY IL5-mediated signaling events
0.0 0.1 PID S1P S1P4 PATHWAY S1P4 pathway
0.0 0.2 PID CXCR3 PATHWAY CXCR3-mediated signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.8 REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS Genes involved in Termination of O-glycan biosynthesis
0.1 0.3 REACTOME ACYL CHAIN REMODELLING OF PI Genes involved in Acyl chain remodelling of PI
0.1 1.3 REACTOME SYNTHESIS AND INTERCONVERSION OF NUCLEOTIDE DI AND TRIPHOSPHATES Genes involved in Synthesis and interconversion of nucleotide di- and triphosphates
0.0 0.6 REACTOME SIGNAL ATTENUATION Genes involved in Signal attenuation
0.0 0.4 REACTOME SIGNALING BY NODAL Genes involved in Signaling by NODAL
0.0 0.7 REACTOME A TETRASACCHARIDE LINKER SEQUENCE IS REQUIRED FOR GAG SYNTHESIS Genes involved in A tetrasaccharide linker sequence is required for GAG synthesis
0.0 1.1 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor
0.0 0.2 REACTOME GAP JUNCTION DEGRADATION Genes involved in Gap junction degradation
0.0 0.5 REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT Genes involved in ABC-family proteins mediated transport
0.0 0.2 REACTOME INTERACTION BETWEEN L1 AND ANKYRINS Genes involved in Interaction between L1 and Ankyrins
0.0 0.1 REACTOME PROLACTIN RECEPTOR SIGNALING Genes involved in Prolactin receptor signaling
0.0 0.1 REACTOME AMINE DERIVED HORMONES Genes involved in Amine-derived hormones
0.0 0.4 REACTOME FORMATION OF THE HIV1 EARLY ELONGATION COMPLEX Genes involved in Formation of the HIV-1 Early Elongation Complex
0.0 0.2 REACTOME CD28 DEPENDENT PI3K AKT SIGNALING Genes involved in CD28 dependent PI3K/Akt signaling
0.0 0.3 REACTOME THE ROLE OF NEF IN HIV1 REPLICATION AND DISEASE PATHOGENESIS Genes involved in The role of Nef in HIV-1 replication and disease pathogenesis