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PRJNA207719: Tissue specific transcriptome profiling

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Results for creb3l2

Z-value: 0.76

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Transcription factors associated with creb3l2

Gene Symbol Gene ID Gene Info
creb3l2
ENSDARG00000063563 cAMP responsive element binding protein 3-like 2

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
creb3l2dr11_v1_chr4_-_4751981_4751983-0.316.1e-01Click!

Activity profile of creb3l2 motif

Sorted Z-values of creb3l2 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr23_-_10175898 1.15 ENSDART00000146185
krt5
keratin 5
chr16_-_45178430 0.88 ENSDART00000165186
si:dkey-33i11.9
si:dkey-33i11.9
chr16_+_49249669 0.79 ENSDART00000181899
LO018128.1

chr2_+_50999675 0.75 ENSDART00000158064
ENSDART00000165746
ENSDART00000163917
ENSDART00000172038
ENSDART00000169048
ENSDART00000164775
eef1da
eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein)
chr3_-_55092051 0.71 ENSDART00000053077
hbba2
hemoglobin, beta adult 2
chr2_+_50999477 0.64 ENSDART00000190111
eef1da
eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein)
chr2_+_39618951 0.60 ENSDART00000077108
zgc:136870
zgc:136870
chr18_+_7553950 0.59 ENSDART00000193420
ENSDART00000062143
zgc:77650
zgc:77650
chr8_+_44783424 0.51 ENSDART00000025875
si:ch1073-459j12.1
si:ch1073-459j12.1
chr5_-_1962500 0.50 ENSDART00000150163
rplp0
ribosomal protein, large, P0
chr22_-_817479 0.48 ENSDART00000123487
zgc:153675
zgc:153675
chr12_-_9132682 0.43 ENSDART00000066471
adam8b
ADAM metallopeptidase domain 8b
chr19_+_47405867 0.42 ENSDART00000041114
psmb2
proteasome subunit beta 2
chr2_+_3452590 0.40 ENSDART00000153935
cyp8b2
cytochrome P450, family 8, subfamily B, polypeptide 2
chr6_+_269204 0.40 ENSDART00000191678
atf4a
activating transcription factor 4a
chr8_+_7316568 0.38 ENSDART00000140874
selenoh
selenoprotein H
chr22_+_9871238 0.38 ENSDART00000141085
ENSDART00000105939
si:dkey-253d23.4
si:dkey-253d23.4
chr14_+_22076596 0.37 ENSDART00000106147
ENSDART00000100278
ENSDART00000131489
slc43a1a
solute carrier family 43 (amino acid system L transporter), member 1a
chr8_-_15292197 0.37 ENSDART00000140867
spata6
spermatogenesis associated 6
chr16_-_17200120 0.36 ENSDART00000147739
gapdh
glyceraldehyde-3-phosphate dehydrogenase
chr6_+_12968101 0.35 ENSDART00000013781
mcm6
minichromosome maintenance complex component 6
chr22_-_31059670 0.34 ENSDART00000022445
cand2
cullin-associated and neddylation-dissociated 2 (putative)
chr12_+_13282797 0.34 ENSDART00000137757
ENSDART00000152397
irf9
interferon regulatory factor 9
chr21_-_5881344 0.32 ENSDART00000009241
rpl35
ribosomal protein L35
chr25_+_5035343 0.31 ENSDART00000011751
parvb
parvin, beta
chr5_-_54714789 0.29 ENSDART00000063357
ccnb1
cyclin B1
chr20_+_32406011 0.29 ENSDART00000018640
ENSDART00000137910
snx3
sorting nexin 3
chr18_-_37252036 0.28 ENSDART00000132230
six5
SIX homeobox 5
chr22_+_31059919 0.27 ENSDART00000077063
sec13
SEC13 homolog, nuclear pore and COPII coat complex component
chr5_-_54714525 0.26 ENSDART00000150138
ENSDART00000150070
ccnb1
cyclin B1
chr7_-_45990386 0.26 ENSDART00000186008
si:ch211-260e23.7
si:ch211-260e23.7
chr3_+_22335030 0.25 ENSDART00000055676
zgc:103564
zgc:103564
chr8_-_46386024 0.25 ENSDART00000136602
ENSDART00000060919
ENSDART00000137472
qars
glutaminyl-tRNA synthetase
chr9_+_6587364 0.25 ENSDART00000122279
fhl2a
four and a half LIM domains 2a
chr25_-_7670616 0.24 ENSDART00000131583
ENSDART00000142794
bet1l
Bet1 golgi vesicular membrane trafficking protein-like
chr24_+_12913329 0.22 ENSDART00000141829
si:dkeyp-28d2.4
si:dkeyp-28d2.4
chr4_-_17409533 0.22 ENSDART00000011943
pah
phenylalanine hydroxylase
chr7_-_45990681 0.22 ENSDART00000165441
si:ch211-260e23.7
si:ch211-260e23.7
chr19_-_42607451 0.21 ENSDART00000004392
fkbp9
FK506 binding protein 9
chr3_+_44062576 0.21 ENSDART00000161277
ENSDART00000168784
nsmce1
NSE1 homolog, SMC5-SMC6 complex component
chr2_-_10386738 0.20 ENSDART00000016369
wls
wntless Wnt ligand secretion mediator
chr5_-_28968964 0.20 ENSDART00000184936
ENSDART00000016628
fam129bb
family with sequence similarity 129, member Bb
chr8_+_8699085 0.20 ENSDART00000021209
uxt
ubiquitously-expressed, prefoldin-like chaperone
chr17_-_11417904 0.20 ENSDART00000103228
arid4a
AT rich interactive domain 4A (RBP1-like)
chr8_-_51578926 0.19 ENSDART00000190625
ankrd39
ankyrin repeat domain 39
chr8_-_51579286 0.18 ENSDART00000147878
ankrd39
ankyrin repeat domain 39
chr16_+_813780 0.18 ENSDART00000162474
ENSDART00000161774
irx1a
iroquois homeobox 1a
chr22_-_94352 0.18 ENSDART00000184883
ndufaf3
NADH dehydrogenase (ubiquinone) complex I, assembly factor 3
chr25_-_37084032 0.17 ENSDART00000025494
hprt1l
hypoxanthine phosphoribosyltransferase 1, like
chr21_-_27413294 0.17 ENSDART00000131646
slc29a2
solute carrier family 29 (equilibrative nucleoside transporter), member 2
chr17_-_15229787 0.17 ENSDART00000039165
styx
serine/threonine/tyrosine interacting protein
chr20_+_15565926 0.16 ENSDART00000063917
si:dkey-86e18.1
si:dkey-86e18.1
chr22_-_25043103 0.16 ENSDART00000015512
polr3f
polymerase (RNA) III (DNA directed) polypeptide F
chr4_-_17391091 0.15 ENSDART00000056002
th2
tyrosine hydroxylase 2
chr9_-_7683799 0.15 ENSDART00000102713
si:ch73-199e17.1
si:ch73-199e17.1
chr19_-_3303995 0.15 ENSDART00000105150
si:ch211-133n4.9
si:ch211-133n4.9
chr4_-_22749553 0.15 ENSDART00000040033
nup107
nucleoporin 107
chr18_-_43857089 0.15 ENSDART00000150170
treh
trehalase (brush-border membrane glycoprotein)
chr16_+_20294976 0.14 ENSDART00000059619
fkbp14
FK506 binding protein 14
chr8_+_49065348 0.14 ENSDART00000032277
ddx51
DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
chr22_+_25841786 0.14 ENSDART00000180863
vasna
vasorin a
chr14_+_16287968 0.14 ENSDART00000106593
prpf19
pre-mRNA processing factor 19
chr16_+_26824691 0.14 ENSDART00000135053
zmp:0000001316
zmp:0000001316
chr22_-_14128716 0.13 ENSDART00000140323
si:ch211-246m6.4
si:ch211-246m6.4
chr17_-_11417551 0.13 ENSDART00000128291
arid4a
AT rich interactive domain 4A (RBP1-like)
chr5_-_32338866 0.13 ENSDART00000017956
ENSDART00000047670
dab2
Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
chr25_+_37443194 0.11 ENSDART00000163178
ENSDART00000190262
slc10a3
solute carrier family 10, member 3
chr15_-_43978141 0.11 ENSDART00000041249
chordc1a
cysteine and histidine-rich domain (CHORD) containing 1a
chr17_+_28706946 0.11 ENSDART00000126967
strn3
striatin, calmodulin binding protein 3
chr7_-_15830251 0.11 ENSDART00000102363
rcn1
reticulocalbin 1, EF-hand calcium binding domain
chr3_+_42923275 0.11 ENSDART00000168228
tmem184a
transmembrane protein 184a
chr16_-_31622777 0.11 ENSDART00000137311
ENSDART00000002930
phf20l1
PHD finger protein 20 like 1
chr12_-_44010532 0.10 ENSDART00000183875
si:ch211-182p11.1
si:ch211-182p11.1
chr4_+_17844013 0.10 ENSDART00000019165
apaf1
apoptotic peptidase activating factor 1
chr4_+_357810 0.10 ENSDART00000163436
ENSDART00000103645
tmem181
transmembrane protein 181
chr22_-_5099824 0.09 ENSDART00000122341
ENSDART00000161345
zfr2
zinc finger RNA binding protein 2
chr3_+_39568290 0.08 ENSDART00000020741
aldoaa
aldolase a, fructose-bisphosphate, a
chr24_-_982443 0.08 ENSDART00000063151
napga
N-ethylmaleimide-sensitive factor attachment protein, gamma a
chr5_-_22130937 0.07 ENSDART00000138606
las1l
LAS1-like, ribosome biogenesis factor
chr17_-_28811747 0.07 ENSDART00000001444
g2e3
G2/M-phase specific E3 ubiquitin protein ligase
chr7_-_47148440 0.07 ENSDART00000185435
ENSDART00000189719
BX005073.3

chr4_-_16883051 0.07 ENSDART00000124627
strap
serine/threonine kinase receptor associated protein
chr14_-_26436760 0.06 ENSDART00000088677
si:dkeyp-110e4.6
si:dkeyp-110e4.6
chr17_+_44441042 0.06 ENSDART00000142123
ap5m1
adaptor-related protein complex 5, mu 1 subunit
chr2_-_44971551 0.06 ENSDART00000018818
mul1a
mitochondrial E3 ubiquitin protein ligase 1a
chr20_+_29209926 0.05 ENSDART00000152949
ENSDART00000153016
katnbl1
katanin p80 subunit B-like 1
chr3_-_18384501 0.05 ENSDART00000027630
kdelr2a
KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2a
chr14_-_26436951 0.05 ENSDART00000140173
si:dkeyp-110e4.6
si:dkeyp-110e4.6
chr7_-_28058442 0.05 ENSDART00000173842
si:ch211-235p24.2
si:ch211-235p24.2
chr17_-_28797395 0.05 ENSDART00000134735
scfd1
sec1 family domain containing 1
chr1_+_17593392 0.05 ENSDART00000078889
helt
helt bHLH transcription factor
chr4_+_77957611 0.05 ENSDART00000156692
arfgap3
ADP-ribosylation factor GTPase activating protein 3
chr4_-_48578324 0.05 ENSDART00000122707
znf980
zinc finger protein 980
chr2_-_55298075 0.04 ENSDART00000186404
ENSDART00000149062
rab8a
RAB8A, member RAS oncogene family
chr1_-_26444075 0.04 ENSDART00000125690
ints12
integrator complex subunit 12
chr15_-_29387446 0.04 ENSDART00000145976
ENSDART00000035096
serpinh1b
serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b
chr8_+_23355484 0.04 ENSDART00000085361
ENSDART00000125729
dnmt3ba
DNA (cytosine-5-)-methyltransferase 3 beta, duplicate a
chr17_+_1514711 0.04 ENSDART00000165641
akt1
v-akt murine thymoma viral oncogene homolog 1
chr7_+_15308042 0.03 ENSDART00000185170
mespaa
mesoderm posterior aa
chr19_+_7173613 0.03 ENSDART00000001331
hsd17b8
hydroxysteroid (17-beta) dehydrogenase 8
chr5_-_67757188 0.03 ENSDART00000167168
b4galt4
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4
chr8_+_46386601 0.03 ENSDART00000129661
ENSDART00000084081
ogg1
8-oxoguanine DNA glycosylase
chr21_+_45685757 0.03 ENSDART00000160530
sec24a
SEC24 homolog A, COPII coat complex component
chr20_+_29209767 0.03 ENSDART00000141252
katnbl1
katanin p80 subunit B-like 1
chr20_-_7069612 0.03 ENSDART00000040793
sirt5
sirtuin 5
chr9_+_31222026 0.03 ENSDART00000145573
clybl
citrate lyase beta like
chr8_-_25980694 0.03 ENSDART00000135456
si:dkey-72l14.3
si:dkey-72l14.3
chr4_+_17843717 0.02 ENSDART00000113507
apaf1
apoptotic peptidase activating factor 1
chr11_-_43104475 0.02 ENSDART00000125368
acyp2
acylphosphatase 2, muscle type
chr4_-_12718367 0.02 ENSDART00000035259
mgst1.1
microsomal glutathione S-transferase 1.1
chr2_-_11504347 0.02 ENSDART00000019392
sdr16c5a
short chain dehydrogenase/reductase family 16C, member 5a
chr19_-_7540821 0.01 ENSDART00000143958
lix1l
limb and CNS expressed 1 like
chr4_-_12718103 0.01 ENSDART00000144388
mgst1.1
microsomal glutathione S-transferase 1.1
chr15_-_29388012 0.01 ENSDART00000115032
serpinh1b
serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b
chr20_+_51061695 0.01 ENSDART00000134416
im:7140055
im:7140055
chr23_-_46034609 0.01 ENSDART00000158712
zgc:65873
zgc:65873
chr21_+_40589770 0.00 ENSDART00000164650
ENSDART00000161584
ENSDART00000161108
pdk3b
pyruvate dehydrogenase kinase, isozyme 3b
chr11_-_7156620 0.00 ENSDART00000172823
ENSDART00000172879
ENSDART00000078916
smim7
small integral membrane protein 7

Network of associatons between targets according to the STRING database.

First level regulatory network of creb3l2

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0051044 positive regulation of membrane protein ectodomain proteolysis(GO:0051044)
0.1 0.3 GO:0010265 SCF complex assembly(GO:0010265)
0.1 0.4 GO:1904353 positive regulation of telomere maintenance(GO:0032206) regulation of telomere capping(GO:1904353) positive regulation of telomere capping(GO:1904355)
0.1 0.3 GO:0070278 extracellular matrix constituent secretion(GO:0070278)
0.1 0.2 GO:0061355 Wnt protein secretion(GO:0061355)
0.1 0.6 GO:0007080 mitotic metaphase plate congression(GO:0007080)
0.1 0.2 GO:0006178 guanine salvage(GO:0006178) GMP salvage(GO:0032263) guanine biosynthetic process(GO:0046099)
0.1 0.2 GO:0000350 generation of catalytic spliceosome for second transesterification step(GO:0000350)
0.1 0.2 GO:0042416 dopamine biosynthetic process from tyrosine(GO:0006585) dopamine biosynthetic process(GO:0042416)
0.0 0.1 GO:0000973 posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000973)
0.0 0.1 GO:0005991 trehalose metabolic process(GO:0005991)
0.0 0.1 GO:0000393 spliceosomal conformational changes to generate catalytic conformation(GO:0000393)
0.0 0.7 GO:0015671 oxygen transport(GO:0015671)
0.0 0.4 GO:0070309 intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress(GO:0070059) lens fiber cell development(GO:0070307) lens fiber cell morphogenesis(GO:0070309)
0.0 0.2 GO:0043393 regulation of protein binding(GO:0043393)
0.0 0.4 GO:1902299 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.0 0.2 GO:0015862 uridine transport(GO:0015862) pyrimidine nucleoside transport(GO:0015864)
0.0 1.4 GO:0006414 translational elongation(GO:0006414)
0.0 0.5 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.3 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.0 0.2 GO:0006570 L-phenylalanine metabolic process(GO:0006558) L-phenylalanine catabolic process(GO:0006559) tyrosine metabolic process(GO:0006570) erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process(GO:1902221) erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process(GO:1902222)
0.0 0.1 GO:2000725 regulation of cardiocyte differentiation(GO:1905207) regulation of cardiac muscle cell differentiation(GO:2000725)
0.0 0.0 GO:0035964 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.0 0.4 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 0.4 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.3 GO:0030032 lamellipodium assembly(GO:0030032)
0.0 0.3 GO:0042541 hemoglobin biosynthetic process(GO:0042541)
0.0 0.4 GO:0015804 neutral amino acid transport(GO:0015804)
0.0 0.4 GO:0050821 protein stabilization(GO:0050821)
0.0 1.2 GO:0031101 fin regeneration(GO:0031101)
0.0 0.0 GO:0048210 Golgi vesicle fusion to target membrane(GO:0048210)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.4 GO:0005853 eukaryotic translation elongation factor 1 complex(GO:0005853)
0.2 0.6 GO:0097125 cyclin B1-CDK1 complex(GO:0097125)
0.1 0.4 GO:0071065 alpha9-beta1 integrin-vascular cell adhesion molecule-1 complex(GO:0071065)
0.1 1.1 GO:0045095 keratin filament(GO:0045095)
0.1 0.4 GO:0097224 sperm connecting piece(GO:0097224)
0.1 0.7 GO:0031838 haptoglobin-hemoglobin complex(GO:0031838)
0.0 0.4 GO:0031080 nuclear pore outer ring(GO:0031080)
0.0 0.2 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.4 GO:1990589 ATF4-CREB1 transcription factor complex(GO:1990589)
0.0 0.2 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.0 0.3 GO:0030904 retromer complex(GO:0030904)
0.0 0.1 GO:0071006 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.0 0.2 GO:0016272 prefoldin complex(GO:0016272)
0.0 0.4 GO:0005839 proteasome core complex(GO:0005839)
0.0 0.8 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 0.2 GO:0042555 MCM complex(GO:0042555)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0008397 sterol 12-alpha-hydroxylase activity(GO:0008397)
0.1 0.4 GO:0032027 myosin light chain binding(GO:0032027)
0.1 0.4 GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.1 0.5 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.1 0.4 GO:0043140 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.1 0.7 GO:0031720 haptoglobin binding(GO:0031720)
0.1 0.2 GO:0004422 hypoxanthine phosphoribosyltransferase activity(GO:0004422)
0.1 0.4 GO:0008140 cAMP response element binding protein binding(GO:0008140)
0.0 0.1 GO:0015927 alpha,alpha-trehalase activity(GO:0004555) trehalase activity(GO:0015927)
0.0 0.4 GO:0016714 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen(GO:0016714)
0.0 1.4 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 0.1 GO:0043531 ADP binding(GO:0043531)
0.0 0.1 GO:0008508 bile acid:sodium symporter activity(GO:0008508)
0.0 0.1 GO:0070016 armadillo repeat domain binding(GO:0070016)
0.0 0.1 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 0.0 GO:0033130 acetylcholine receptor binding(GO:0033130)
0.0 0.1 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.0 0.2 GO:0070003 threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003)
0.0 0.1 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.0 0.0 GO:0000035 acyl binding(GO:0000035)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 ST TYPE I INTERFERON PATHWAY Type I Interferon (alpha/beta IFN) Pathway
0.0 1.1 PID DELTA NP63 PATHWAY Validated transcriptional targets of deltaNp63 isoforms
0.0 0.1 SA PROGRAMMED CELL DEATH Programmed cell death, or apoptosis, eliminates damaged or unneeded cells.
0.0 0.9 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.6 REACTOME RECRUITMENT OF NUMA TO MITOTIC CENTROSOMES Genes involved in Recruitment of NuMA to mitotic centrosomes
0.0 0.1 REACTOME DIGESTION OF DIETARY CARBOHYDRATE Genes involved in Digestion of dietary carbohydrate
0.0 0.4 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.0 0.3 REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS Genes involved in Cell-extracellular matrix interactions
0.0 0.1 REACTOME GAP JUNCTION DEGRADATION Genes involved in Gap junction degradation
0.0 0.4 REACTOME GLYCOLYSIS Genes involved in Glycolysis
0.0 0.3 REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC Genes involved in Antigen Presentation: Folding, assembly and peptide loading of class I MHC
0.0 0.3 REACTOME INTERFERON GAMMA SIGNALING Genes involved in Interferon gamma signaling
0.0 0.3 REACTOME MITOCHONDRIAL TRNA AMINOACYLATION Genes involved in Mitochondrial tRNA aminoacylation
0.0 0.4 REACTOME CROSS PRESENTATION OF SOLUBLE EXOGENOUS ANTIGENS ENDOSOMES Genes involved in Cross-presentation of soluble exogenous antigens (endosomes)