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PRJNA207719: Tissue specific transcriptome profiling
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Results for cxxc1a+cxxc1b+mbd1a
Z-value: 0.14
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Transcription factors associated with cxxc1a+cxxc1b+mbd1a
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
cxxc1b
|
ENSDARG00000025718 | CXXC finger protein 1b |
|
mbd1a
|
ENSDARG00000101205 | methyl-CpG binding domain protein 1a |
|
cxxc1a
|
ENSDARG00000101996 | CXXC finger protein 1a |
|
cxxc1b
|
ENSDARG00000111907 | CXXC finger protein 1b |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| mbd1a | dr11_v1_chr8_+_7875110_7875142 | 0.72 | 1.7e-01 | Click! |
| cxxc1a | dr11_v1_chr8_+_7854130_7854130 | 0.48 | 4.1e-01 | Click! |
| cxxc1b | dr11_v1_chr11_+_25539698_25539698 | 0.31 | 6.1e-01 | Click! |
Activity profile of cxxc1a+cxxc1b+mbd1a motif
Sorted Z-values of cxxc1a+cxxc1b+mbd1a motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr21_-_23746916 | 0.08 |
ENSDART00000017229
|
ncam1a
|
neural cell adhesion molecule 1a |
| chr17_+_3390772 | 0.05 |
ENSDART00000160073
|
sntg2
|
syntrophin, gamma 2 |
| chr1_+_41690402 | 0.05 |
ENSDART00000177298
|
fbxo41
|
F-box protein 41 |
| chr24_+_35183595 | 0.05 |
ENSDART00000075142
|
pcmtd1
|
protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 |
| chr21_+_2721752 | 0.04 |
ENSDART00000174953
|
CABZ01073424.1
|
|
| chr3_-_19200571 | 0.04 |
ENSDART00000131503
ENSDART00000012335 |
rfx1a
|
regulatory factor X, 1a (influences HLA class II expression) |
| chr21_-_28901095 | 0.03 |
ENSDART00000180820
|
cxxc5a
|
CXXC finger protein 5a |
| chr15_-_3940671 | 0.00 |
ENSDART00000189741
|
mindy4b
|
MINDY family member 4B |
| chr21_-_7781555 | 0.00 |
ENSDART00000084380
ENSDART00000189131 |
aggf1
|
angiogenic factor with G patch and FHA domains 1 |
| chr14_-_48786708 | 0.00 |
ENSDART00000169730
|
si:ch211-199b20.3
|
si:ch211-199b20.3 |
| chr17_+_26803470 | 0.00 |
ENSDART00000023470
|
pgrmc2
|
progesterone receptor membrane component 2 |
| chr23_-_20345473 | 0.00 |
ENSDART00000140935
|
si:rp71-17i16.6
|
si:rp71-17i16.6 |
| chr4_-_17278904 | 0.00 |
ENSDART00000178686
ENSDART00000135730 |
lrmp
|
lymphoid-restricted membrane protein |
Network of associatons between targets according to the STRING database.
First level regulatory network of cxxc1a+cxxc1b+mbd1a
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0021961 | posterior commissure morphogenesis(GO:0021961) |