ISMARA results: gata1a+gata2b

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PRJNA207719: Tissue specific transcriptome profiling

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Results for gata1a+gata2b

Z-value: 0.31

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Transcription factors associated with gata1a+gata2b

Gene Symbol	Gene ID	Gene Info
gata2b NCBI UniProt	ENSDARG00000009094	GATA binding protein 2b
gata1a NCBI UniProt	ENSDARG00000013477	GATA binding protein 1a
gata1a NCBI UniProt	ENSDARG00000117116	GATA binding protein 1a

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
gata2b	dr11_v1_chr6_+_40794015_40794015	0.10	8.7e-01	Click!
gata1a	dr11_v1_chr11_-_25418856_25418856	-0.00	9.9e-01	Click!

Activity profile of gata1a+gata2b motif

Sorted Z-values of gata1a+gata2b motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr21_+_24287403 Show fit	0.35	ENSDART00000111169	cadm1a NCBI UniProt Show fit	cell adhesion molecule 1a
chr22_+_15507218 Show fit	0.34	ENSDART00000125450	gpc1a NCBI UniProt Show fit	glypican 1a
chr6_-_49159207 Show fit	0.26	ENSDART00000041942	tspan2a NCBI UniProt Show fit	tetraspanin 2a
chr7_-_72067475 Show fit	0.22	ENSDART00000017763	LO018380.1 NCBI UniProt Show fit
chr19_-_32710922 Show fit	0.21	ENSDART00000004034	hpca NCBI UniProt Show fit	hippocalcin
chr4_-_1360495 Show fit	0.18	ENSDART00000164623	ptn NCBI UniProt Show fit	pleiotrophin
chr22_+_635813 Show fit	0.16	ENSDART00000179067	CU856139.1 NCBI UniProt Show fit
chr12_-_5505205 Show fit	0.15	ENSDART00000092319	abi3b NCBI UniProt Show fit	ABI family, member 3b
chr18_+_3169579 Show fit	0.13	ENSDART00000164724 ENSDART00000186340 ENSDART00000181247 ENSDART00000168056	pak1 NCBI UniProt Show fit	p21 protein (Cdc42/Rac)-activated kinase 1
chr15_-_16704417 Show fit	0.10	ENSDART00000155163	caln1 NCBI UniProt Show fit	calneuron 1

Showing 1 to 10 of 18 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of gata1a+gata2b

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.3	GO:0035622	intrahepatic bile duct development(GO:0035622)
0.0	0.1	GO:0003232	bulbus arteriosus development(GO:0003232)

Showing 1 to 2 of 2 entries

Gene overrepresentation in cellular component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.3	GO:0046658	anchored component of plasma membrane(GO:0046658)

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Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.4	GO:0017134	fibroblast growth factor binding(GO:0017134)
0.0	0.1	GO:0070412	R-SMAD binding(GO:0070412)

Showing 1 to 2 of 2 entries

Gene overrepresentation in curated gene sets: canonical pathways category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	PID SYNDECAN 3 PATHWAY	Syndecan-3-mediated signaling events

Showing 1 to 1 of 1 entries

Gene overrepresentation in curated gene sets: REACTOME pathways category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	REACTOME CD28 DEPENDENT VAV1 PATHWAY	Genes involved in CD28 dependent Vav1 pathway

Showing 1 to 1 of 1 entries

Results for gata1a+gata2b

Z-value: 0.31

Motif logo

Transcription factors associated with gata1a+gata2b

Activity-expression correlation:

Activity profile of gata1a+gata2b motif

Sorted Z-values of gata1a+gata2b motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of gata1a+gata2b

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: canonical pathways category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: