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PRJNA207719: Tissue specific transcriptome profiling
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Results for gata1a+gata2b
Z-value: 0.31
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Transcription factors associated with gata1a+gata2b
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
gata2b
|
ENSDARG00000009094 | GATA binding protein 2b |
|
gata1a
|
ENSDARG00000013477 | GATA binding protein 1a |
|
gata1a
|
ENSDARG00000117116 | GATA binding protein 1a |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| gata2b | dr11_v1_chr6_+_40794015_40794015 | 0.10 | 8.7e-01 | Click! |
| gata1a | dr11_v1_chr11_-_25418856_25418856 | -0.00 | 9.9e-01 | Click! |
Activity profile of gata1a+gata2b motif
Sorted Z-values of gata1a+gata2b motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr21_+_24287403 | 0.35 |
ENSDART00000111169
|
cadm1a
|
cell adhesion molecule 1a |
| chr22_+_15507218 | 0.34 |
ENSDART00000125450
|
gpc1a
|
glypican 1a |
| chr6_-_49159207 | 0.26 |
ENSDART00000041942
|
tspan2a
|
tetraspanin 2a |
| chr7_-_72067475 | 0.22 |
ENSDART00000017763
|
LO018380.1
|
|
| chr19_-_32710922 | 0.21 |
ENSDART00000004034
|
hpca
|
hippocalcin |
| chr4_-_1360495 | 0.18 |
ENSDART00000164623
|
ptn
|
pleiotrophin |
| chr22_+_635813 | 0.16 |
ENSDART00000179067
|
CU856139.1
|
|
| chr12_-_5505205 | 0.15 |
ENSDART00000092319
|
abi3b
|
ABI family, member 3b |
| chr18_+_3169579 | 0.13 |
ENSDART00000164724
ENSDART00000186340 ENSDART00000181247 ENSDART00000168056 |
pak1
|
p21 protein (Cdc42/Rac)-activated kinase 1 |
| chr15_-_16704417 | 0.10 |
ENSDART00000155163
|
caln1
|
calneuron 1 |
| chr21_+_43561650 | 0.07 |
ENSDART00000085071
|
gpr185a
|
G protein-coupled receptor 185 a |
| chr19_+_12444943 | 0.06 |
ENSDART00000135706
|
ldlrad4a
|
low density lipoprotein receptor class A domain containing 4a |
| chr17_+_5768608 | 0.06 |
ENSDART00000157039
|
rp1l1a
|
retinitis pigmentosa 1-like 1a |
| chr10_-_31175744 | 0.05 |
ENSDART00000191728
|
pknox2
|
pbx/knotted 1 homeobox 2 |
| chr10_+_42589391 | 0.01 |
ENSDART00000067689
ENSDART00000075259 |
fgfr1b
|
fibroblast growth factor receptor 1b |
| chr22_+_21398508 | 0.01 |
ENSDART00000089408
ENSDART00000186091 |
shdb
|
Src homology 2 domain containing transforming protein D, b |
| chr16_-_35532937 | 0.01 |
ENSDART00000193209
|
ctps1b
|
CTP synthase 1b |
| chr5_+_18047111 | 0.00 |
ENSDART00000132164
|
hira
|
histone cell cycle regulator a |
Network of associatons between targets according to the STRING database.
First level regulatory network of gata1a+gata2b
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0003232 | bulbus arteriosus development(GO:0003232) |
| 0.0 | 0.3 | GO:0035622 | intrahepatic bile duct development(GO:0035622) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.3 | GO:0046658 | anchored component of plasma membrane(GO:0046658) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.4 | GO:0017134 | fibroblast growth factor binding(GO:0017134) |
| 0.0 | 0.1 | GO:0070412 | R-SMAD binding(GO:0070412) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | PID SYNDECAN 3 PATHWAY | Syndecan-3-mediated signaling events |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | REACTOME CD28 DEPENDENT VAV1 PATHWAY | Genes involved in CD28 dependent Vav1 pathway |