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PRJNA207719: Tissue specific transcriptome profiling
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Results for hmx1+hmx3b
Z-value: 0.29
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Transcription factors associated with hmx1+hmx3b
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
hmx1
|
ENSDARG00000095651 | H6 family homeobox 1 |
|
hmx3b
|
ENSDARG00000096716 | H6 family homeobox 3b |
|
hmx1
|
ENSDARG00000109725 | H6 family homeobox 1 |
|
hmx1
|
ENSDARG00000111765 | H6 family homeobox 1 |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| hmx1 | dr11_v1_chr1_-_40914752_40914752 | 0.19 | 7.6e-01 | Click! |
| hmx3b | dr11_v1_chr12_-_49154934_49154934 | 0.06 | 9.3e-01 | Click! |
Activity profile of hmx1+hmx3b motif
Sorted Z-values of hmx1+hmx3b motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr5_-_42272517 | 0.13 |
ENSDART00000137692
ENSDART00000164363 |
si:ch211-207c6.2
|
si:ch211-207c6.2 |
| chr14_-_9128919 | 0.09 |
ENSDART00000108641
|
sh2d1ab
|
SH2 domain containing 1A duplicate b |
| chr14_+_14568437 | 0.09 |
ENSDART00000164749
|
pcdh20
|
protocadherin 20 |
| chr20_-_23426339 | 0.08 |
ENSDART00000004625
|
zar1
|
zygote arrest 1 |
| chr19_+_9295244 | 0.07 |
ENSDART00000132255
ENSDART00000144299 |
si:ch73-15n24.1
|
si:ch73-15n24.1 |
| chr5_+_43782267 | 0.06 |
ENSDART00000130355
|
nos2a
|
nitric oxide synthase 2a, inducible |
| chr13_-_50108337 | 0.06 |
ENSDART00000133308
|
nid1a
|
nidogen 1a |
| chr11_+_18130300 | 0.06 |
ENSDART00000169146
|
zgc:175135
|
zgc:175135 |
| chr18_-_5595546 | 0.06 |
ENSDART00000191825
|
cyp1a
|
cytochrome P450, family 1, subfamily A |
| chr22_-_20695237 | 0.06 |
ENSDART00000112722
|
org
|
oogenesis-related gene |
| chr7_+_66565930 | 0.06 |
ENSDART00000154597
|
tmem176l.3b
|
transmembrane protein 176l.3b |
| chr18_-_20458412 | 0.05 |
ENSDART00000012241
|
kif23
|
kinesin family member 23 |
| chr11_+_18157260 | 0.05 |
ENSDART00000144659
|
zgc:173545
|
zgc:173545 |
| chr11_+_18183220 | 0.05 |
ENSDART00000113468
|
LO018315.10
|
|
| chr22_+_16293071 | 0.05 |
ENSDART00000170960
|
dbt
|
dihydrolipoamide branched chain transacylase E2 |
| chr9_-_36924388 | 0.05 |
ENSDART00000059756
|
ralba
|
v-ral simian leukemia viral oncogene homolog Ba (ras related) |
| chr1_-_56032619 | 0.05 |
ENSDART00000143793
|
c3a.4
|
complement component c3a, duplicate 4 |
| chr25_+_3327071 | 0.05 |
ENSDART00000136131
ENSDART00000133243 |
ldhbb
|
lactate dehydrogenase Bb |
| chr25_+_3326885 | 0.05 |
ENSDART00000104866
|
ldhbb
|
lactate dehydrogenase Bb |
| chr8_-_23194408 | 0.05 |
ENSDART00000141090
|
si:ch211-196c10.15
|
si:ch211-196c10.15 |
| chr3_-_26244256 | 0.04 |
ENSDART00000103741
|
ppp4ca
|
protein phosphatase 4, catalytic subunit a |
| chr5_-_69620722 | 0.04 |
ENSDART00000097248
|
aldh2.2
|
aldehyde dehydrogenase 2 family (mitochondrial), tandem duplicate 2 |
| chr22_+_1313046 | 0.04 |
ENSDART00000170421
|
si:ch73-138e16.6
|
si:ch73-138e16.6 |
| chr7_+_17443567 | 0.04 |
ENSDART00000060383
|
nitr2b
|
novel immune-type receptor 2b |
| chr3_+_26244353 | 0.04 |
ENSDART00000103733
|
atad5a
|
ATPase family, AAA domain containing 5a |
| chr8_-_46486009 | 0.04 |
ENSDART00000140431
|
sult1st9
|
sulfotransferase family 1, cytosolic sulfotransferase 9 |
| chr16_+_25163443 | 0.04 |
ENSDART00000105514
|
znf576.2
|
zinc finger protein 576, tandem duplicate 2 |
| chr18_-_25568994 | 0.04 |
ENSDART00000133029
|
si:ch211-13k12.2
|
si:ch211-13k12.2 |
| chr10_-_44560165 | 0.04 |
ENSDART00000181217
ENSDART00000076084 |
npm2b
|
nucleophosmin/nucleoplasmin, 2b |
| chr10_+_35439952 | 0.03 |
ENSDART00000006284
|
hhla2a.2
|
HERV-H LTR-associating 2a, tandem duplicate 2 |
| chr21_-_37973819 | 0.03 |
ENSDART00000133405
|
ripply1
|
ripply transcriptional repressor 1 |
| chr11_-_7261717 | 0.03 |
ENSDART00000128959
|
zgc:113223
|
zgc:113223 |
| chr14_-_3381303 | 0.03 |
ENSDART00000171601
|
im:7150988
|
im:7150988 |
| chr4_-_4751981 | 0.03 |
ENSDART00000147436
ENSDART00000092984 ENSDART00000158466 |
creb3l2
|
cAMP responsive element binding protein 3-like 2 |
| chr6_-_37422841 | 0.03 |
ENSDART00000138351
|
cth
|
cystathionase (cystathionine gamma-lyase) |
| chr5_+_32835219 | 0.03 |
ENSDART00000140832
ENSDART00000186055 |
si:ch211-208h16.4
|
si:ch211-208h16.4 |
| chr16_-_42965192 | 0.03 |
ENSDART00000113714
|
mtx1a
|
metaxin 1a |
| chr8_+_22472584 | 0.03 |
ENSDART00000138303
|
si:dkey-23c22.9
|
si:dkey-23c22.9 |
| chr10_-_33297864 | 0.03 |
ENSDART00000163360
|
PRDM15
|
PR/SET domain 15 |
| chr2_-_38114370 | 0.03 |
ENSDART00000131837
|
chd8
|
chromodomain helicase DNA binding protein 8 |
| chr22_-_6988102 | 0.03 |
ENSDART00000185618
|
fgfr1bl
|
fibroblast growth factor receptor 1b, like |
| chr22_+_1911269 | 0.02 |
ENSDART00000164158
ENSDART00000168205 |
znf1156
|
zinc finger protein 1156 |
| chr19_-_19379084 | 0.02 |
ENSDART00000165206
|
smarcc1b
|
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b |
| chr5_-_14326959 | 0.02 |
ENSDART00000137355
|
tet3
|
tet methylcytosine dioxygenase 3 |
| chr15_-_1822548 | 0.02 |
ENSDART00000082026
ENSDART00000180230 |
mmp28
|
matrix metallopeptidase 28 |
| chr20_+_37295006 | 0.02 |
ENSDART00000153137
|
cx23
|
connexin 23 |
| chr13_-_37109987 | 0.02 |
ENSDART00000136750
|
syne2b
|
spectrin repeat containing, nuclear envelope 2b |
| chr5_+_11290851 | 0.02 |
ENSDART00000180408
|
CABZ01077124.1
|
|
| chr18_-_33080454 | 0.02 |
ENSDART00000191907
|
v2ra18
|
vomeronasal 2 receptor, a18 |
| chr2_-_17115256 | 0.02 |
ENSDART00000190488
|
pif1
|
PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) |
| chr4_+_20576857 | 0.02 |
ENSDART00000125340
|
BX248410.2
|
|
| chr2_+_16652238 | 0.02 |
ENSDART00000091351
|
gk5
|
glycerol kinase 5 (putative) |
| chr3_+_18807006 | 0.02 |
ENSDART00000180091
|
tnpo2
|
transportin 2 (importin 3, karyopherin beta 2b) |
| chr10_+_43039947 | 0.02 |
ENSDART00000193434
|
atg10
|
ATG10 autophagy related 10 homolog (S. cerevisiae) |
| chr6_+_4528631 | 0.01 |
ENSDART00000122042
|
RNF219
|
ring finger protein 219 |
| chr6_+_22326624 | 0.01 |
ENSDART00000020333
|
rae1
|
ribonucleic acid export 1 |
| chr17_+_7510220 | 0.01 |
ENSDART00000192648
|
klhl10b.1
|
kelch-like family member 10b, tandem duplicate 1 |
| chr15_+_1134870 | 0.01 |
ENSDART00000155392
|
p2ry13
|
purinergic receptor P2Y13 |
| chr23_-_18913032 | 0.01 |
ENSDART00000136678
|
si:ch211-209j10.6
|
si:ch211-209j10.6 |
| chr19_+_11217279 | 0.01 |
ENSDART00000181859
|
si:ch73-109i22.2
|
si:ch73-109i22.2 |
| chr21_+_26657404 | 0.01 |
ENSDART00000129035
ENSDART00000186550 |
prdx5
|
peroxiredoxin 5 |
| chr4_-_43388943 | 0.01 |
ENSDART00000150796
|
si:dkey-29j8.2
|
si:dkey-29j8.2 |
| chr4_-_18741942 | 0.01 |
ENSDART00000145747
ENSDART00000066980 ENSDART00000186518 |
atxn10
|
ataxin 10 |
| chr9_+_43799829 | 0.01 |
ENSDART00000186240
|
ube2e3
|
ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) |
| chr22_-_4649238 | 0.01 |
ENSDART00000125302
|
fbn2b
|
fibrillin 2b |
| chr15_-_14884332 | 0.01 |
ENSDART00000165237
|
si:ch211-24o8.4
|
si:ch211-24o8.4 |
| chr17_+_50076501 | 0.01 |
ENSDART00000156303
|
vps39
|
vacuolar protein sorting 39 homolog (S. cerevisiae) |
| chr20_+_28861435 | 0.01 |
ENSDART00000142678
|
slc10a1
|
solute carrier family 10 (sodium/bile acid cotransporter), member 1 |
| chr5_-_25645593 | 0.01 |
ENSDART00000044471
|
tmc2b
|
transmembrane channel-like 2b |
| chr4_+_14727018 | 0.01 |
ENSDART00000124189
|
cmasa
|
cytidine monophosphate N-acetylneuraminic acid synthetase a |
| chr11_-_37691449 | 0.01 |
ENSDART00000185340
|
zgc:158258
|
zgc:158258 |
| chr4_-_76154252 | 0.01 |
ENSDART00000161269
|
BX957252.1
|
|
| chr22_+_724639 | 0.01 |
ENSDART00000105323
|
zgc:162255
|
zgc:162255 |
| chr24_+_26134209 | 0.01 |
ENSDART00000038824
|
tmtopsb
|
teleost multiple tissue opsin b |
| chr20_+_28861629 | 0.00 |
ENSDART00000187274
ENSDART00000047826 |
slc10a1
|
solute carrier family 10 (sodium/bile acid cotransporter), member 1 |
| chr6_-_40352215 | 0.00 |
ENSDART00000103992
|
ttll3
|
tubulin tyrosine ligase-like family, member 3 |
| chr8_-_13013123 | 0.00 |
ENSDART00000147802
|
dennd2da
|
DENN/MADD domain containing 2Da |
| chr17_+_6563307 | 0.00 |
ENSDART00000156454
|
adgrf3a
|
adhesion G protein-coupled receptor F3a |
| chr5_+_37032038 | 0.00 |
ENSDART00000045036
|
nfkbib
|
nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta |
| chr13_+_23176330 | 0.00 |
ENSDART00000168351
|
sorbs1
|
sorbin and SH3 domain containing 1 |
| chr24_-_1021318 | 0.00 |
ENSDART00000181403
|
ralaa
|
v-ral simian leukemia viral oncogene homolog Aa (ras related) |
| chr11_+_29770966 | 0.00 |
ENSDART00000088624
ENSDART00000124471 |
rpgrb
|
retinitis pigmentosa GTPase regulator b |
| chr20_-_34164278 | 0.00 |
ENSDART00000153128
|
hmcn1
|
hemicentin 1 |
| chr15_+_33696559 | 0.00 |
ENSDART00000188248
ENSDART00000161951 |
hdac12
|
histone deacetylase 12 |
Network of associatons between targets according to the STRING database.
First level regulatory network of hmx1+hmx3b
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.0 | GO:0070278 | extracellular matrix constituent secretion(GO:0070278) |
| 0.0 | 0.1 | GO:0030825 | regulation of cGMP metabolic process(GO:0030823) positive regulation of cGMP metabolic process(GO:0030825) regulation of cGMP biosynthetic process(GO:0030826) positive regulation of cGMP biosynthetic process(GO:0030828) regulation of guanylate cyclase activity(GO:0031282) positive regulation of guanylate cyclase activity(GO:0031284) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0004459 | L-lactate dehydrogenase activity(GO:0004459) |