PRJNA207719: Tissue specific transcriptome profiling
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
hoxc6b | dr11_v1_chr11_+_2198831_2198831 | -0.37 | 5.4e-01 | Click! |
hoxc6a | dr11_v1_chr23_+_36115541_36115541 | -0.23 | 7.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr22_-_24791505 Show fit | 0.57 |
ENSDART00000136837
|
vitellogenin 4 |
|
chr18_+_13162728 Show fit | 0.55 |
ENSDART00000101472
|
tyrosine aminotransferase |
|
chr2_+_56657804 Show fit | 0.42 |
ENSDART00000113964
|
RNA polymerase II subunit E |
|
chr20_+_54299419 Show fit | 0.41 |
ENSDART00000056089
ENSDART00000193107 |
si:zfos-1505d6.3 |
|
chr24_-_38110779 Show fit | 0.40 |
ENSDART00000147783
|
c-reactive protein, pentraxin-related |
|
chr20_+_54309148 Show fit | 0.40 |
ENSDART00000099360
|
zona pellucida glycoprotein 2, tandem duplicate 1 |
|
chr20_+_54304800 Show fit | 0.37 |
ENSDART00000121661
|
zona pellucida glycoprotein 2, tandem duplicate 6 |
|
chr22_-_16154771 Show fit | 0.30 |
ENSDART00000009464
|
solute carrier family 30 (zinc transporter), member 7 |
|
chr14_-_46173265 Show fit | 0.30 |
ENSDART00000164321
|
zmp:0000000758 |
|
chr2_-_17392799 Show fit | 0.27 |
ENSDART00000136470
ENSDART00000141188 |
ST3 beta-galactoside alpha-2,3-sialyltransferase 3b |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.6 | GO:0032355 | response to estradiol(GO:0032355) |
0.1 | 0.5 | GO:0006572 | tyrosine catabolic process(GO:0006572) |
0.0 | 0.3 | GO:0000915 | assembly of actomyosin apparatus involved in cytokinesis(GO:0000912) actomyosin contractile ring assembly(GO:0000915) actomyosin contractile ring organization(GO:0044837) |
0.0 | 0.3 | GO:0006829 | zinc II ion transport(GO:0006829) |
0.0 | 0.2 | GO:0006700 | C21-steroid hormone biosynthetic process(GO:0006700) |
0.0 | 0.2 | GO:0045903 | positive regulation of translational fidelity(GO:0045903) |
0.0 | 0.2 | GO:0090646 | mitochondrial tRNA processing(GO:0090646) |
0.0 | 0.2 | GO:0006857 | oligopeptide transport(GO:0006857) |
0.0 | 0.2 | GO:0015936 | coenzyme A metabolic process(GO:0015936) |
0.0 | 0.1 | GO:0038107 | nodal signaling pathway involved in determination of left/right asymmetry(GO:0038107) regulation of nodal signaling pathway involved in determination of left/right asymmetry(GO:1900145) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.2 | GO:0097124 | cyclin A2-CDK2 complex(GO:0097124) |
0.0 | 0.2 | GO:0005850 | eukaryotic translation initiation factor 2 complex(GO:0005850) |
0.0 | 0.2 | GO:0009295 | nucleoid(GO:0009295) mitochondrial nucleoid(GO:0042645) |
0.0 | 0.1 | GO:1990604 | IRE1-TRAF2-ASK1 complex(GO:1990604) |
0.0 | 0.1 | GO:0033553 | rDNA heterochromatin(GO:0033553) |
0.0 | 0.1 | GO:0005736 | DNA-directed RNA polymerase I complex(GO:0005736) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.6 | GO:0045735 | nutrient reservoir activity(GO:0045735) |
0.0 | 0.6 | GO:0008483 | transaminase activity(GO:0008483) |
0.1 | 0.5 | GO:0008118 | N-acetyllactosaminide alpha-2,3-sialyltransferase activity(GO:0008118) |
0.0 | 0.3 | GO:0005247 | voltage-gated chloride channel activity(GO:0005247) |
0.0 | 0.3 | GO:0005385 | zinc ion transmembrane transporter activity(GO:0005385) |
0.1 | 0.2 | GO:0008386 | cholesterol monooxygenase (side-chain-cleaving) activity(GO:0008386) oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen(GO:0016713) |
0.0 | 0.2 | GO:0052905 | tRNA (guanine(9)-N(1))-methyltransferase activity(GO:0052905) |
0.0 | 0.2 | GO:0000254 | C-4 methylsterol oxidase activity(GO:0000254) |
0.0 | 0.2 | GO:0042936 | dipeptide transporter activity(GO:0042936) dipeptide transmembrane transporter activity(GO:0071916) |
0.0 | 0.2 | GO:0002039 | p53 binding(GO:0002039) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.5 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 0.4 | PID IL6 7 PATHWAY | IL6-mediated signaling events |
0.0 | 0.1 | ST IL 13 PATHWAY | Interleukin 13 (IL-13) Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.4 | REACTOME CREATION OF C4 AND C2 ACTIVATORS | Genes involved in Creation of C4 and C2 activators |
0.0 | 0.3 | REACTOME ZINC TRANSPORTERS | Genes involved in Zinc transporters |
0.0 | 0.2 | REACTOME ENDOGENOUS STEROLS | Genes involved in Endogenous sterols |