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PRJNA207719: Tissue specific transcriptome profiling

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Results for hoxd3a

Z-value: 0.26

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Transcription factors associated with hoxd3a

Gene Symbol Gene ID Gene Info
hoxd3a
ENSDARG00000059280 homeobox D3a

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
hoxd3adr11_v1_chr9_-_1939232_19392320.632.6e-01Click!

Activity profile of hoxd3a motif

Sorted Z-values of hoxd3a motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr25_+_31276842 0.17 ENSDART00000187238
tnni2a.4
troponin I type 2a (skeletal, fast), tandem duplicate 4
chr2_+_50608099 0.14 ENSDART00000185805
ENSDART00000111135
neurod6b
neuronal differentiation 6b
chr17_+_23298928 0.14 ENSDART00000153652
zgc:165461
zgc:165461
chr11_+_13058613 0.11 ENSDART00000161532
zfyve9b
zinc finger, FYVE domain containing 9b
chr6_-_40029423 0.10 ENSDART00000103230
pfkfb4b
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4b
chr19_+_41464870 0.09 ENSDART00000102778
dlx6a
distal-less homeobox 6a
chr8_-_50888806 0.09 ENSDART00000053750
acsl2
acyl-CoA synthetase long chain family member 2
chr14_+_22591624 0.08 ENSDART00000108987
gfra4b
GDNF family receptor alpha 4b
chr5_-_38094130 0.08 ENSDART00000131831
si:ch211-284e13.4
si:ch211-284e13.4
chr2_-_16380283 0.07 ENSDART00000149992
si:dkey-231j24.3
si:dkey-231j24.3
chr21_-_37790727 0.07 ENSDART00000162907
gabrb4
gamma-aminobutyric acid (GABA) A receptor, beta 4
chr12_+_13405445 0.07 ENSDART00000089042
kcnh4b
potassium voltage-gated channel, subfamily H (eag-related), member 4b
chr18_-_42333428 0.07 ENSDART00000034225
cntn5
contactin 5
chr15_+_15856178 0.06 ENSDART00000080338
dusp14
dual specificity phosphatase 14
chr17_-_29311835 0.06 ENSDART00000104224
tecpr2
tectonin beta-propeller repeat containing 2
chr1_-_50859053 0.06 ENSDART00000132779
ENSDART00000137648
si:dkeyp-123h10.2
si:dkeyp-123h10.2
chr14_-_2933185 0.06 ENSDART00000161677
ENSDART00000162446
ENSDART00000109378
si:dkey-201i24.6
si:dkey-201i24.6
chr16_+_14707960 0.05 ENSDART00000137912
col14a1a
collagen, type XIV, alpha 1a
chr8_-_53166975 0.05 ENSDART00000114683
rbsn
rabenosyn, RAB effector
chr17_-_37054959 0.05 ENSDART00000151921
dnmt3ab
DNA (cytosine-5-)-methyltransferase 3 alpha b
chr8_-_30979494 0.05 ENSDART00000138959
si:ch211-251j10.3
si:ch211-251j10.3
chr13_-_39736938 0.04 ENSDART00000141645
zgc:171482
zgc:171482
chr20_-_14925281 0.04 ENSDART00000152641
dnm3a
dynamin 3a
chr16_+_45424907 0.04 ENSDART00000134471
phf1
PHD finger protein 1
chr25_+_29160102 0.04 ENSDART00000162854
pkmb
pyruvate kinase M1/2b
chr10_-_26744131 0.04 ENSDART00000020096
ENSDART00000162710
ENSDART00000179853
fgf13b
fibroblast growth factor 13b
chr10_-_5847655 0.04 ENSDART00000192773
ankrd55
ankyrin repeat domain 55
chr11_-_40728380 0.04 ENSDART00000023745
ccdc114
coiled-coil domain containing 114
chr2_-_33687214 0.03 ENSDART00000147439
atp6v0b
ATPase H+ transporting V0 subunit b
chr8_+_17078692 0.03 ENSDART00000023206
plk2b
polo-like kinase 2b (Drosophila)
chr7_-_48667056 0.03 ENSDART00000006378
cdkn1ca
cyclin-dependent kinase inhibitor 1Ca
chr10_+_39091353 0.03 ENSDART00000125986
si:ch73-1a9.4
si:ch73-1a9.4
chr10_-_41400049 0.03 ENSDART00000009838
gpat4
glycerol-3-phosphate acyltransferase 4
chr5_+_66353589 0.03 ENSDART00000138246
si:ch211-261c8.5
si:ch211-261c8.5
chr13_-_35808904 0.03 ENSDART00000171667
map3k4
mitogen-activated protein kinase kinase kinase 4
chr20_-_46362606 0.03 ENSDART00000153087
bmf2
BCL2 modifying factor 2
chr21_+_8427059 0.03 ENSDART00000143151
dennd1a
DENN/MADD domain containing 1A
chr6_-_57539141 0.03 ENSDART00000156967
itcha
itchy E3 ubiquitin protein ligase a
chr16_+_45425181 0.02 ENSDART00000168591
phf1
PHD finger protein 1
chr17_-_40956035 0.02 ENSDART00000124715
si:dkey-16j16.4
si:dkey-16j16.4
chr3_+_30500968 0.02 ENSDART00000103447
si:dkey-13n23.3
si:dkey-13n23.3
chr20_-_14924858 0.02 ENSDART00000047039
dnm3a
dynamin 3a
chr11_+_33818179 0.02 ENSDART00000109418
spoplb
speckle-type POZ protein-like b
chr11_+_2391649 0.02 ENSDART00000104571
igfbp6a
insulin-like growth factor binding protein 6a
chr8_-_22274222 0.02 ENSDART00000131805
nphp4
nephronophthisis 4
chr15_-_35252522 0.02 ENSDART00000144153
ENSDART00000059195
mff
mitochondrial fission factor
chr7_-_12464412 0.02 ENSDART00000178723
adamtsl3
ADAMTS-like 3
chr6_+_32382743 0.02 ENSDART00000190009
dock7
dedicator of cytokinesis 7
chr7_-_46777876 0.02 ENSDART00000193954
tshz3b
teashirt zinc finger homeobox 3b
chr20_-_7072487 0.02 ENSDART00000145954
si:ch211-121a2.2
si:ch211-121a2.2
chr19_-_6988837 0.02 ENSDART00000145741
ENSDART00000167640
znf384l
zinc finger protein 384 like
chr14_+_30762131 0.01 ENSDART00000145039
si:ch211-145o7.3
si:ch211-145o7.3
chr19_-_27462720 0.01 ENSDART00000135901
si:ch73-25f10.6
si:ch73-25f10.6
chr10_+_11355841 0.01 ENSDART00000193067
ENSDART00000064215
cops4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)
chr1_+_52392511 0.01 ENSDART00000144025
si:ch211-217k17.8
si:ch211-217k17.8
chr18_+_9362455 0.01 ENSDART00000187025
sema3ab
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab
chr14_-_48961056 0.01 ENSDART00000124192
si:dkeyp-121d2.7
si:dkeyp-121d2.7
chr13_-_31435137 0.01 ENSDART00000057441
rtn1a
reticulon 1a
chr10_+_39091716 0.01 ENSDART00000193072
si:ch73-1a9.4
si:ch73-1a9.4
chr5_-_28109416 0.01 ENSDART00000042002
si:ch211-48m9.1
si:ch211-48m9.1
chr15_+_31899312 0.01 ENSDART00000155315
frya
furry homolog a (Drosophila)
chr8_-_22273819 0.01 ENSDART00000121513
nphp4
nephronophthisis 4
chr24_+_36204028 0.01 ENSDART00000063832
ENSDART00000155260
rbbp8
retinoblastoma binding protein 8
chr15_-_38361787 0.01 ENSDART00000155758
trpc2a
transient receptor potential cation channel, subfamily C, member 2a
chr22_-_21897203 0.00 ENSDART00000158501
ENSDART00000105566
ENSDART00000136795
gna11a
guanine nucleotide binding protein (G protein), alpha 11a (Gq class)
chr5_+_28160503 0.00 ENSDART00000051516
tacr1a
tachykinin receptor 1a
chr5_+_66433287 0.00 ENSDART00000170757
kntc1
kinetochore associated 1
chr19_-_10971230 0.00 ENSDART00000166196
LO018584.1

Network of associatons between targets according to the STRING database.

First level regulatory network of hoxd3a

PNG image of the network

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Gene Ontology Analysis