PRJNA207719: Tissue specific transcriptome profiling
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
jdp2a | dr11_v1_chr17_-_50220228_50220228 | 0.82 | 8.6e-02 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.3 | GO:1903670 | regulation of sprouting angiogenesis(GO:1903670) |
0.5 | 1.9 | GO:0090386 | phagosome maturation involved in apoptotic cell clearance(GO:0090386) phagolysosome assembly involved in apoptotic cell clearance(GO:0090387) |
0.0 | 1.8 | GO:0007218 | neuropeptide signaling pathway(GO:0007218) |
0.1 | 1.5 | GO:0097324 | melanocyte migration(GO:0097324) |
0.1 | 1.4 | GO:0007631 | feeding behavior(GO:0007631) |
0.1 | 1.4 | GO:0015701 | bicarbonate transport(GO:0015701) |
0.0 | 1.4 | GO:0035118 | embryonic pectoral fin morphogenesis(GO:0035118) |
0.2 | 1.3 | GO:0042983 | amyloid precursor protein biosynthetic process(GO:0042983) regulation of amyloid precursor protein biosynthetic process(GO:0042984) |
0.0 | 1.3 | GO:0006817 | phosphate ion transport(GO:0006817) |
0.0 | 1.3 | GO:0007040 | lysosome organization(GO:0007040) lytic vacuole organization(GO:0080171) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.3 | GO:0030141 | secretory granule(GO:0030141) |
0.1 | 2.4 | GO:0043209 | myelin sheath(GO:0043209) |
0.0 | 2.2 | GO:0070382 | exocytic vesicle(GO:0070382) |
0.0 | 1.3 | GO:0031901 | early endosome membrane(GO:0031901) |
0.1 | 0.9 | GO:0031209 | SCAR complex(GO:0031209) |
0.0 | 0.9 | GO:0032587 | ruffle membrane(GO:0032587) |
0.1 | 0.7 | GO:0043083 | synaptic cleft(GO:0043083) |
0.0 | 0.7 | GO:0005640 | nuclear outer membrane(GO:0005640) |
0.0 | 0.7 | GO:0098978 | glutamatergic synapse(GO:0098978) |
0.0 | 0.5 | GO:0090665 | dystrophin-associated glycoprotein complex(GO:0016010) glycoprotein complex(GO:0090665) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 2.4 | GO:0019911 | structural constituent of myelin sheath(GO:0019911) |
0.0 | 2.1 | GO:0004683 | calmodulin-dependent protein kinase activity(GO:0004683) |
0.1 | 1.8 | GO:0048018 | receptor activator activity(GO:0030546) receptor agonist activity(GO:0048018) |
0.3 | 1.5 | GO:0030331 | estrogen receptor binding(GO:0030331) |
0.0 | 1.5 | GO:0005179 | hormone activity(GO:0005179) |
0.3 | 1.4 | GO:0031843 | neuropeptide Y receptor binding(GO:0031841) type 2 neuropeptide Y receptor binding(GO:0031843) |
0.1 | 1.4 | GO:0008510 | sodium:bicarbonate symporter activity(GO:0008510) |
0.4 | 1.3 | GO:0000822 | inositol hexakisphosphate binding(GO:0000822) |
0.1 | 1.3 | GO:0080025 | phosphatidylinositol-3,5-bisphosphate binding(GO:0080025) |
0.1 | 1.2 | GO:0005154 | epidermal growth factor receptor binding(GO:0005154) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.2 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.0 | 1.1 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 1.0 | SIG CHEMOTAXIS | Genes related to chemotaxis |
0.0 | 0.9 | PID ECADHERIN NASCENT AJ PATHWAY | E-cadherin signaling in the nascent adherens junction |
0.0 | 0.5 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
0.0 | 0.4 | PID LPA4 PATHWAY | LPA4-mediated signaling events |
0.0 | 0.4 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
0.0 | 0.4 | ST GA12 PATHWAY | G alpha 12 Pathway |
0.0 | 0.3 | PID ANTHRAX PATHWAY | Cellular roles of Anthrax toxin |
0.0 | 0.3 | PID TCR JNK PATHWAY | JNK signaling in the CD4+ TCR pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.8 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |
0.0 | 1.4 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.1 | 1.2 | REACTOME SIGNAL ATTENUATION | Genes involved in Signal attenuation |
0.1 | 1.0 | REACTOME REGULATION OF AMPK ACTIVITY VIA LKB1 | Genes involved in Regulation of AMPK activity via LKB1 |
0.1 | 0.7 | REACTOME CLASS C 3 METABOTROPIC GLUTAMATE PHEROMONE RECEPTORS | Genes involved in Class C/3 (Metabotropic glutamate/pheromone receptors) |
0.0 | 0.4 | REACTOME ADENYLATE CYCLASE ACTIVATING PATHWAY | Genes involved in Adenylate cyclase activating pathway |
0.0 | 0.4 | REACTOME IONOTROPIC ACTIVITY OF KAINATE RECEPTORS | Genes involved in Ionotropic activity of Kainate Receptors |
0.0 | 0.4 | REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION | Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression |
0.0 | 0.3 | REACTOME ERKS ARE INACTIVATED | Genes involved in ERKs are inactivated |
0.0 | 0.3 | REACTOME SYNTHESIS OF PC | Genes involved in Synthesis of PC |