PRJNA207719: Tissue specific transcriptome profiling
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
klf12a | dr11_v1_chr1_+_34527213_34527213 | 0.06 | 9.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_58221163 Show fit | 2.19 |
ENSDART00000157939
|
|
|
chr1_+_57371447 Show fit | 1.54 |
ENSDART00000152229
ENSDART00000181077 |
si:dkey-27j5.3 |
|
chr10_+_1668106 Show fit | 1.38 |
ENSDART00000142278
|
small G protein signaling modulator 1b |
|
chr1_-_59176949 Show fit | 1.17 |
ENSDART00000128742
|
|
|
chr9_+_42095220 Show fit | 1.11 |
ENSDART00000148317
ENSDART00000134431 |
poly(rC) binding protein 3 |
|
chr2_+_413370 Show fit | 1.03 |
ENSDART00000122138
|
myosin light chain kinase family, member 4a |
|
chr17_-_4318393 Show fit | 0.95 |
ENSDART00000167995
ENSDART00000153824 |
N-ethylmaleimide-sensitive factor attachment protein, beta a |
|
chr10_+_19554604 Show fit | 0.84 |
ENSDART00000063806
|
ATPase H+ transporting V1 subunit B2 |
|
chr5_+_37056818 Show fit | 0.83 |
ENSDART00000036760
|
tubulin polymerization-promoting protein family member 2 |
|
chr5_-_46273938 Show fit | 0.82 |
ENSDART00000080033
|
si:ch211-130m23.3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.8 | GO:0090630 | activation of GTPase activity(GO:0090630) |
0.0 | 1.2 | GO:1902600 | hydrogen ion transmembrane transport(GO:1902600) |
0.2 | 1.0 | GO:0010807 | regulation of synaptic vesicle priming(GO:0010807) |
0.0 | 1.0 | GO:0048791 | calcium ion-regulated exocytosis of neurotransmitter(GO:0048791) |
0.0 | 0.8 | GO:0071230 | cellular response to amino acid stimulus(GO:0071230) |
0.0 | 0.8 | GO:0046785 | microtubule polymerization(GO:0046785) |
0.2 | 0.7 | GO:1990535 | neuron projection maintenance(GO:1990535) |
0.0 | 0.7 | GO:1901385 | regulation of voltage-gated calcium channel activity(GO:1901385) |
0.0 | 0.7 | GO:0014046 | dopamine secretion(GO:0014046) regulation of dopamine secretion(GO:0014059) |
0.0 | 0.7 | GO:0016126 | sterol biosynthetic process(GO:0016126) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.1 | GO:0044309 | dendritic spine(GO:0043197) neuron spine(GO:0044309) |
0.0 | 1.8 | GO:0005871 | kinesin complex(GO:0005871) |
0.1 | 1.2 | GO:0033180 | proton-transporting V-type ATPase, V1 domain(GO:0033180) |
0.1 | 1.2 | GO:0043209 | myelin sheath(GO:0043209) |
0.2 | 1.0 | GO:0070044 | synaptobrevin 2-SNAP-25-syntaxin-1a complex(GO:0070044) |
0.0 | 1.0 | GO:0048788 | cytoskeleton of presynaptic active zone(GO:0048788) |
0.0 | 0.8 | GO:0001725 | stress fiber(GO:0001725) contractile actin filament bundle(GO:0097517) |
0.1 | 0.7 | GO:0031931 | TORC1 complex(GO:0031931) |
0.0 | 0.7 | GO:0005891 | voltage-gated calcium channel complex(GO:0005891) |
0.1 | 0.6 | GO:0032584 | growth cone membrane(GO:0032584) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.8 | GO:0001540 | beta-amyloid binding(GO:0001540) |
0.2 | 1.0 | GO:0005483 | soluble NSF attachment protein activity(GO:0005483) |
0.1 | 1.0 | GO:0004687 | myosin light chain kinase activity(GO:0004687) |
0.0 | 1.0 | GO:0044325 | ion channel binding(GO:0044325) |
0.0 | 0.8 | GO:0005520 | insulin-like growth factor binding(GO:0005520) |
0.0 | 0.8 | GO:0030674 | protein binding, bridging(GO:0030674) |
0.1 | 0.7 | GO:0000254 | C-4 methylsterol oxidase activity(GO:0000254) |
0.0 | 0.7 | GO:0008331 | high voltage-gated calcium channel activity(GO:0008331) |
0.0 | 0.7 | GO:0008574 | ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574) |
0.0 | 0.7 | GO:0001786 | phosphatidylserine binding(GO:0001786) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.9 | PID REELIN PATHWAY | Reelin signaling pathway |
0.0 | 0.9 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.0 | 0.7 | PID LKB1 PATHWAY | LKB1 signaling events |
0.0 | 0.7 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
0.0 | 0.6 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.0 | 0.5 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.0 | 0.5 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 0.2 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
0.0 | 0.1 | SA FAS SIGNALING | The TNF-type receptor Fas induces apoptosis on ligand binding. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.8 | REACTOME INSULIN RECEPTOR RECYCLING | Genes involved in Insulin receptor recycling |
0.0 | 0.8 | REACTOME MYOGENESIS | Genes involved in Myogenesis |
0.1 | 0.7 | REACTOME MTORC1 MEDIATED SIGNALLING | Genes involved in mTORC1-mediated signalling |
0.0 | 0.7 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.0 | 0.5 | REACTOME PLATELET SENSITIZATION BY LDL | Genes involved in Platelet sensitization by LDL |
0.0 | 0.5 | REACTOME KINESINS | Genes involved in Kinesins |
0.0 | 0.3 | REACTOME RETROGRADE NEUROTROPHIN SIGNALLING | Genes involved in Retrograde neurotrophin signalling |
0.0 | 0.3 | REACTOME SYNTHESIS OF PE | Genes involved in Synthesis of PE |
0.0 | 0.3 | REACTOME ELONGATION ARREST AND RECOVERY | Genes involved in Elongation arrest and recovery |
0.0 | 0.3 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |