PRJNA207719: Tissue specific transcriptome profiling
Gene Symbol | Gene ID | Gene Info |
---|---|---|
nr2f1b
|
ENSDARG00000017168 | nuclear receptor subfamily 2, group F, member 1b |
nr2f5
|
ENSDARG00000033172 | nuclear receptor subfamily 2, group F, member 5 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
nr2f1b | dr11_v1_chr10_+_43797130_43797130 | -0.96 | 1.0e-02 | Click! |
nr2f5 | dr11_v1_chr16_+_46294337_46294337 | -0.05 | 9.4e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_+_6010177 | 0.58 |
ENSDART00000170047
ENSDART00000022526 ENSDART00000161001 ENSDART00000188999 |
gtpbp3
|
GTP binding protein 3, mitochondrial |
chr18_+_8340886 | 0.51 |
ENSDART00000081132
|
cpt1b
|
carnitine palmitoyltransferase 1B (muscle) |
chr7_+_4474880 | 0.49 |
ENSDART00000143528
|
si:dkey-83f18.14
|
si:dkey-83f18.14 |
chr3_-_19517462 | 0.49 |
ENSDART00000162027
|
CU571315.2
|
|
chr20_+_53577502 | 0.42 |
ENSDART00000126983
|
myh6
|
myosin, heavy chain 6, cardiac muscle, alpha |
chr22_+_344763 | 0.39 |
ENSDART00000181934
|
CU914780.1
|
|
chr21_+_28445052 | 0.37 |
ENSDART00000077871
|
pygma
|
phosphorylase, glycogen, muscle A |
chr19_+_8606883 | 0.37 |
ENSDART00000054469
ENSDART00000185264 |
s100a10a
|
S100 calcium binding protein A10a |
chr13_-_13754091 | 0.36 |
ENSDART00000131255
|
ky
|
kyphoscoliosis peptidase |
chr18_-_49283058 | 0.34 |
ENSDART00000076554
|
si:zfos-464b6.2
|
si:zfos-464b6.2 |
chr17_+_5351922 | 0.32 |
ENSDART00000105394
|
runx2a
|
runt-related transcription factor 2a |
chr18_-_11729 | 0.31 |
ENSDART00000159781
|
WHAMM
|
WAS protein homolog associated with actin, golgi membranes and microtubules |
chr19_+_7938121 | 0.30 |
ENSDART00000140053
ENSDART00000146649 |
si:dkey-266f7.5
|
si:dkey-266f7.5 |
chr5_+_64856666 | 0.30 |
ENSDART00000050863
|
zgc:101858
|
zgc:101858 |
chr14_+_34558480 | 0.30 |
ENSDART00000075170
|
pttg1
|
pituitary tumor-transforming 1 |
chr13_+_22249636 | 0.29 |
ENSDART00000108472
ENSDART00000173123 |
synpo2la
|
synaptopodin 2-like a |
chr2_+_52847049 | 0.29 |
ENSDART00000121980
|
creb3l3b
|
cAMP responsive element binding protein 3-like 3b |
chr24_+_42149453 | 0.26 |
ENSDART00000128766
|
serpinb1l3
|
serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 3 |
chr20_+_25581627 | 0.25 |
ENSDART00000030229
|
cyp2p9
|
cytochrome P450, family 2, subfamily P, polypeptide 9 |
chr25_+_1549838 | 0.25 |
ENSDART00000115001
|
avpr1aa
|
arginine vasopressin receptor 1Aa |
chr19_+_26828502 | 0.24 |
ENSDART00000183654
ENSDART00000126006 ENSDART00000185341 |
FP085398.1
|
|
chr10_-_76352 | 0.24 |
ENSDART00000186560
ENSDART00000144722 |
dyrk1aa
|
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, a |
chr22_+_37888249 | 0.24 |
ENSDART00000076082
|
fetub
|
fetuin B |
chr1_+_56229674 | 0.23 |
ENSDART00000127714
|
c3a.2
|
complement component c3a, duplicate 2 |
chr1_+_144284 | 0.22 |
ENSDART00000064061
|
prozb
|
protein Z, vitamin K-dependent plasma glycoprotein b |
chr15_-_41756454 | 0.21 |
ENSDART00000139498
ENSDART00000099302 |
ftr72
|
finTRIM family, member 72 |
chr15_+_22394074 | 0.21 |
ENSDART00000109931
|
oafa
|
OAF homolog a (Drosophila) |
chr4_-_13613148 | 0.21 |
ENSDART00000067164
ENSDART00000111247 |
irf5
|
interferon regulatory factor 5 |
chr24_+_42149296 | 0.21 |
ENSDART00000154231
|
serpinb1l3
|
serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 3 |
chr15_+_34933552 | 0.19 |
ENSDART00000155368
|
zgc:66024
|
zgc:66024 |
chr4_-_77120928 | 0.19 |
ENSDART00000174154
|
CU467646.1
|
|
chr20_-_16906623 | 0.19 |
ENSDART00000012859
ENSDART00000171628 |
psma6b
|
proteasome subunit alpha 6b |
chr5_-_8910703 | 0.19 |
ENSDART00000097221
|
adamts12
|
ADAM metallopeptidase with thrombospondin type 1 motif, 12 |
chr2_+_58841181 | 0.19 |
ENSDART00000164102
|
cirbpa
|
cold inducible RNA binding protein a |
chr24_+_37700259 | 0.18 |
ENSDART00000066556
|
zmp:0000000624
|
zmp:0000000624 |
chr8_+_23711842 | 0.18 |
ENSDART00000128783
|
ppardb
|
peroxisome proliferator-activated receptor delta b |
chr13_+_50778187 | 0.18 |
ENSDART00000159597
|
dntt
|
deoxynucleotidyltransferase, terminal |
chr8_-_13419049 | 0.17 |
ENSDART00000133656
|
pimr101
|
Pim proto-oncogene, serine/threonine kinase, related 101 |
chr8_-_13471916 | 0.17 |
ENSDART00000146558
|
pimr105
|
Pim proto-oncogene, serine/threonine kinase, related 105 |
chr1_-_20824411 | 0.17 |
ENSDART00000182810
|
tll1
|
tolloid-like 1 |
chr24_-_22003031 | 0.17 |
ENSDART00000133627
|
si:rp71-1f1.5
|
si:rp71-1f1.5 |
chr24_-_22015751 | 0.16 |
ENSDART00000147055
|
si:rp71-1f1.6
|
si:rp71-1f1.6 |
chr1_-_18772241 | 0.16 |
ENSDART00000147645
ENSDART00000133194 ENSDART00000147525 ENSDART00000191493 |
tbc1d1
|
TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 |
chr8_-_13454281 | 0.15 |
ENSDART00000141959
|
CR354547.2
|
|
chr4_+_73215536 | 0.15 |
ENSDART00000174290
|
LO018260.2
|
Danio rerio protein NLRC3-like (LOC101883187), mRNA. |
chr24_+_42127983 | 0.15 |
ENSDART00000190157
ENSDART00000176032 ENSDART00000175790 |
wwp1
|
WW domain containing E3 ubiquitin protein ligase 1 |
chr24_+_42132962 | 0.14 |
ENSDART00000187739
|
wwp1
|
WW domain containing E3 ubiquitin protein ligase 1 |
chr5_-_25084318 | 0.14 |
ENSDART00000089339
|
dph7
|
diphthamide biosynthesis 7 |
chr9_-_9980704 | 0.14 |
ENSDART00000130243
ENSDART00000193475 |
ugt1ab
|
UDP glucuronosyltransferase 1 family a, b |
chr2_-_5502256 | 0.14 |
ENSDART00000193037
|
saga
|
S-antigen; retina and pineal gland (arrestin) a |
chr16_+_20895904 | 0.14 |
ENSDART00000052662
|
hoxa13b
|
homeobox A13b |
chr13_-_50546634 | 0.14 |
ENSDART00000192127
|
CU570781.2
|
|
chr8_-_13442871 | 0.13 |
ENSDART00000144887
|
pimr106
|
Pim proto-oncogene, serine/threonine kinase, related 106 |
chr8_-_13486258 | 0.13 |
ENSDART00000137459
|
pimr104
|
Pim proto-oncogene, serine/threonine kinase, related 104 |
chr4_+_9011448 | 0.13 |
ENSDART00000192357
|
samm50l
|
sorting and assembly machinery component 50 homolog, like |
chr22_-_26834043 | 0.13 |
ENSDART00000087202
|
si:dkey-44g23.5
|
si:dkey-44g23.5 |
chr19_+_7506380 | 0.12 |
ENSDART00000182837
|
prcc
|
papillary renal cell carcinoma (translocation-associated) |
chr17_+_389218 | 0.12 |
ENSDART00000162898
|
si:rp71-62i8.1
|
si:rp71-62i8.1 |
chr7_+_27251376 | 0.12 |
ENSDART00000173521
ENSDART00000173962 |
sox6
|
SRY (sex determining region Y)-box 6 |
chr5_+_54400971 | 0.11 |
ENSDART00000169695
|
bspry
|
B-box and SPRY domain containing |
chr1_-_55785722 | 0.10 |
ENSDART00000142069
ENSDART00000043933 |
ndufb7
|
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7 |
chr14_+_46118834 | 0.10 |
ENSDART00000124417
ENSDART00000017785 |
naa15a
|
N(alpha)-acetyltransferase 15, NatA auxiliary subunit a |
chr4_+_1530287 | 0.10 |
ENSDART00000067446
|
slc38a4
|
solute carrier family 38, member 4 |
chr22_+_18316144 | 0.10 |
ENSDART00000137985
|
gatad2ab
|
GATA zinc finger domain containing 2Ab |
chr21_+_5882300 | 0.09 |
ENSDART00000165065
|
uqcr10
|
ubiquinol-cytochrome c reductase, complex III subunit X |
chr18_-_6975175 | 0.09 |
ENSDART00000134194
|
si:dkey-266m15.6
|
si:dkey-266m15.6 |
chr2_-_16449504 | 0.09 |
ENSDART00000144801
|
atr
|
ATR serine/threonine kinase |
chr17_+_14711765 | 0.09 |
ENSDART00000012889
|
cx28.6
|
connexin 28.6 |
chr7_-_2039060 | 0.08 |
ENSDART00000173879
|
si:cabz01007794.1
|
si:cabz01007794.1 |
chr14_+_2487672 | 0.07 |
ENSDART00000170629
ENSDART00000123063 |
fgf18a
|
fibroblast growth factor 18a |
chr2_+_21605547 | 0.06 |
ENSDART00000112014
|
mplkip
|
M-phase specific PLK1 interacting protein |
chr4_+_9011825 | 0.06 |
ENSDART00000058007
|
samm50l
|
sorting and assembly machinery component 50 homolog, like |
chr15_-_34933560 | 0.05 |
ENSDART00000006288
|
dhx16
|
DEAH (Asp-Glu-Ala-His) box polypeptide 16 |
chr23_+_25822742 | 0.05 |
ENSDART00000184436
|
r3hdml
|
R3H domain containing-like |
chr17_-_53282539 | 0.05 |
ENSDART00000164953
|
FO704905.1
|
|
chr24_+_42117231 | 0.05 |
ENSDART00000067734
|
snx16
|
sorting nexin 16 |
chr4_+_76441823 | 0.04 |
ENSDART00000163932
|
si:dkey-16p6.1
|
si:dkey-16p6.1 |
chr9_+_500052 | 0.04 |
ENSDART00000166707
|
CU984600.1
|
|
chr8_-_13428740 | 0.04 |
ENSDART00000131826
|
CR354547.3
|
|
chr10_-_29831944 | 0.04 |
ENSDART00000063923
ENSDART00000136264 |
zpr1
|
ZPR1 zinc finger |
chr5_-_40292299 | 0.04 |
ENSDART00000097525
|
snx18a
|
sorting nexin 18a |
chr4_+_1722899 | 0.03 |
ENSDART00000021139
|
fgfr1op2
|
FGFR1 oncogene partner 2 |
chr2_+_33382648 | 0.03 |
ENSDART00000137207
ENSDART00000098831 |
slc6a9
|
solute carrier family 6 (neurotransmitter transporter, glycine), member 9 |
chr3_+_41917499 | 0.03 |
ENSDART00000028673
|
lfng
|
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase |
chr18_+_7073130 | 0.03 |
ENSDART00000101216
ENSDART00000148947 |
si:dkey-88e18.2
|
si:dkey-88e18.2 |
chr15_+_27364394 | 0.02 |
ENSDART00000122101
|
tbx2b
|
T-box 2b |
chr2_+_2904080 | 0.02 |
ENSDART00000110416
|
eif2b5
|
eukaryotic translation initiation factor 2B, subunit 5 epsilon |
chr1_-_40132831 | 0.01 |
ENSDART00000135647
|
si:ch211-113e8.10
|
si:ch211-113e8.10 |
chr24_-_21991770 | 0.01 |
ENSDART00000147296
|
si:rp71-1f1.4
|
si:rp71-1f1.4 |
chr1_-_26544268 | 0.01 |
ENSDART00000152117
|
si:ch211-202n12.2
|
si:ch211-202n12.2 |
chr7_-_26446726 | 0.00 |
ENSDART00000173607
|
zgc:172079
|
zgc:172079 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.4 | GO:0052576 | carbohydrate localization(GO:0052575) carbohydrate storage(GO:0052576) |
0.1 | 0.4 | GO:0055014 | atrial cardiac muscle cell development(GO:0055014) |
0.1 | 0.2 | GO:0045040 | outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040) |
0.0 | 0.2 | GO:0035124 | embryonic caudal fin morphogenesis(GO:0035124) |
0.0 | 0.5 | GO:0009437 | carnitine metabolic process(GO:0009437) |
0.0 | 0.6 | GO:0002098 | tRNA wobble uridine modification(GO:0002098) |
0.0 | 0.2 | GO:0001992 | regulation of systemic arterial blood pressure by vasopressin(GO:0001992) |
0.0 | 0.2 | GO:0010887 | negative regulation of cholesterol storage(GO:0010887) |
0.0 | 0.1 | GO:1901207 | regulation of heart looping(GO:1901207) |
0.0 | 0.1 | GO:0017196 | N-terminal peptidyl-methionine acetylation(GO:0017196) |
0.0 | 0.1 | GO:0060612 | adipose tissue development(GO:0060612) |
0.0 | 0.3 | GO:0033046 | negative regulation of sister chromatid segregation(GO:0033046) negative regulation of mitotic sister chromatid segregation(GO:0033048) negative regulation of mitotic sister chromatid separation(GO:2000816) |
0.0 | 0.1 | GO:0002031 | G-protein coupled receptor internalization(GO:0002031) |
0.0 | 0.2 | GO:0048026 | positive regulation of mRNA splicing, via spliceosome(GO:0048026) |
0.0 | 0.3 | GO:0032233 | positive regulation of actin filament bundle assembly(GO:0032233) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.2 | GO:0001401 | mitochondrial sorting and assembly machinery complex(GO:0001401) |
0.0 | 0.1 | GO:0031415 | NatA complex(GO:0031415) |
0.0 | 0.2 | GO:0019773 | proteasome core complex, alpha-subunit complex(GO:0019773) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.4 | GO:0008184 | phosphorylase activity(GO:0004645) glycogen phosphorylase activity(GO:0008184) |
0.1 | 0.5 | GO:0004095 | carnitine O-palmitoyltransferase activity(GO:0004095) O-palmitoyltransferase activity(GO:0016416) |
0.1 | 0.3 | GO:0004060 | arylamine N-acetyltransferase activity(GO:0004060) |
0.0 | 0.2 | GO:0005000 | vasopressin receptor activity(GO:0005000) |
0.0 | 0.3 | GO:0035497 | cAMP response element binding(GO:0035497) |
0.0 | 0.4 | GO:0048306 | calcium-dependent protein binding(GO:0048306) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.5 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.5 | REACTOME ACTIVATED AMPK STIMULATES FATTY ACID OXIDATION IN MUSCLE | Genes involved in Activated AMPK stimulates fatty-acid oxidation in muscle |
0.0 | 0.4 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.0 | 0.1 | REACTOME REGULATION OF THE FANCONI ANEMIA PATHWAY | Genes involved in Regulation of the Fanconi anemia pathway |