PRJNA207719: Tissue specific transcriptome profiling
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
nrf1 | dr11_v1_chr4_-_15103646_15103696 | 0.88 | 4.7e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr8_+_1082100 Show fit | 1.91 |
ENSDART00000149276
|
leucine zipper, putative tumor suppressor family member 3b |
|
chr15_-_45538773 Show fit | 1.91 |
ENSDART00000113494
|
Mab-21 domain containing 2 |
|
chr3_-_34801041 Show fit | 1.83 |
ENSDART00000103043
|
N-ethylmaleimide-sensitive factor a |
|
chr7_+_73593814 Show fit | 1.79 |
ENSDART00000110544
|
zinc finger protein 219 |
|
chr14_-_33454595 Show fit | 1.72 |
ENSDART00000109615
ENSDART00000173267 ENSDART00000185737 ENSDART00000190989 |
transmembrane protein 255A |
|
chr23_+_44732863 Show fit | 1.71 |
ENSDART00000160044
ENSDART00000172268 |
ATPase Na+/K+ transporting subunit beta 2a |
|
chr18_+_17428258 Show fit | 1.59 |
ENSDART00000010452
|
zgc:91860 |
|
chr6_-_48311 Show fit | 1.58 |
ENSDART00000131010
|
zgc:114175 |
|
chr16_-_25285469 Show fit | 1.57 |
ENSDART00000183943
ENSDART00000191103 ENSDART00000154543 |
PRELI domain containing 3A |
|
chr7_+_23495986 Show fit | 1.57 |
ENSDART00000190739
ENSDART00000115299 ENSDART00000101423 ENSDART00000142401 |
zgc:109889 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.9 | GO:0036376 | cellular potassium ion homeostasis(GO:0030007) sodium ion export from cell(GO:0036376) sodium ion export(GO:0071436) |
0.0 | 3.8 | GO:0043087 | regulation of GTPase activity(GO:0043087) |
0.1 | 2.8 | GO:0006891 | intra-Golgi vesicle-mediated transport(GO:0006891) |
0.1 | 2.5 | GO:0051496 | positive regulation of stress fiber assembly(GO:0051496) |
0.0 | 2.5 | GO:0030705 | cytoskeleton-dependent intracellular transport(GO:0030705) |
0.1 | 2.4 | GO:0051932 | synaptic transmission, GABAergic(GO:0051932) |
0.2 | 2.3 | GO:0007026 | negative regulation of microtubule depolymerization(GO:0007026) negative regulation of microtubule polymerization or depolymerization(GO:0031111) |
0.2 | 2.3 | GO:0042396 | phosphagen metabolic process(GO:0006599) phosphocreatine metabolic process(GO:0006603) phosphagen biosynthetic process(GO:0042396) phosphocreatine biosynthetic process(GO:0046314) |
0.2 | 2.3 | GO:2000601 | positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601) |
0.1 | 2.3 | GO:0006828 | manganese ion transport(GO:0006828) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 3.9 | GO:0005890 | sodium:potassium-exchanging ATPase complex(GO:0005890) cation-transporting ATPase complex(GO:0090533) |
0.0 | 3.3 | GO:0030424 | axon(GO:0030424) |
0.1 | 3.2 | GO:0043679 | axon terminus(GO:0043679) |
0.0 | 3.2 | GO:0014069 | postsynaptic density(GO:0014069) |
0.0 | 3.1 | GO:0005795 | Golgi stack(GO:0005795) |
0.0 | 2.8 | GO:0005871 | kinesin complex(GO:0005871) |
0.1 | 2.6 | GO:1902711 | GABA receptor complex(GO:1902710) GABA-A receptor complex(GO:1902711) |
0.2 | 2.3 | GO:0036449 | microtubule minus-end(GO:0036449) |
0.1 | 2.3 | GO:0031209 | SCAR complex(GO:0031209) |
0.1 | 2.1 | GO:0071564 | npBAF complex(GO:0071564) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.9 | GO:0003924 | GTPase activity(GO:0003924) |
0.0 | 4.3 | GO:0001228 | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228) |
0.2 | 3.9 | GO:0001671 | ATPase activator activity(GO:0001671) |
0.0 | 2.7 | GO:0060090 | binding, bridging(GO:0060090) |
0.0 | 2.6 | GO:0003725 | double-stranded RNA binding(GO:0003725) |
0.0 | 2.6 | GO:0003714 | transcription corepressor activity(GO:0003714) |
0.3 | 2.3 | GO:0071933 | Arp2/3 complex binding(GO:0071933) |
0.2 | 2.3 | GO:0030507 | spectrin binding(GO:0030507) |
0.2 | 2.3 | GO:0016775 | creatine kinase activity(GO:0004111) phosphotransferase activity, nitrogenous group as acceptor(GO:0016775) |
0.1 | 2.3 | GO:0015279 | store-operated calcium channel activity(GO:0015279) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.2 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
0.0 | 1.6 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.0 | 1.4 | PID HEDGEHOG GLI PATHWAY | Hedgehog signaling events mediated by Gli proteins |
0.0 | 1.0 | PID PTP1B PATHWAY | Signaling events mediated by PTP1B |
0.0 | 0.8 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.0 | 0.7 | PID EPHB FWD PATHWAY | EPHB forward signaling |
0.0 | 0.6 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.0 | 0.6 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.0 | 0.5 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
0.0 | 0.5 | PID PI3KCI AKT PATHWAY | Class I PI3K signaling events mediated by Akt |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 4.0 | REACTOME GABA A RECEPTOR ACTIVATION | Genes involved in GABA A receptor activation |
0.0 | 1.9 | REACTOME CLASS A1 RHODOPSIN LIKE RECEPTORS | Genes involved in Class A/1 (Rhodopsin-like receptors) |
0.0 | 1.7 | REACTOME G ALPHA Z SIGNALLING EVENTS | Genes involved in G alpha (z) signalling events |
0.0 | 1.3 | REACTOME MRNA SPLICING MINOR PATHWAY | Genes involved in mRNA Splicing - Minor Pathway |
0.0 | 1.3 | REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS | Genes involved in Glycerophospholipid biosynthesis |
0.2 | 1.0 | REACTOME PD1 SIGNALING | Genes involved in PD-1 signaling |
0.1 | 1.0 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.0 | 1.0 | REACTOME KINESINS | Genes involved in Kinesins |
0.1 | 0.9 | REACTOME PROTEOLYTIC CLEAVAGE OF SNARE COMPLEX PROTEINS | Genes involved in Proteolytic cleavage of SNARE complex proteins |
0.0 | 0.7 | REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY | Genes involved in Post-chaperonin tubulin folding pathway |