PRJNA207719: Tissue specific transcriptome profiling
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
prdm14 | dr11_v1_chr24_+_14451404_14451404 | 0.89 | 4.1e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_-_30642819 Show fit | 1.29 |
ENSDART00000078154
|
neuronal PAS domain protein 4a |
|
chr21_-_43949208 Show fit | 1.28 |
ENSDART00000150983
|
calcium/calmodulin-dependent protein kinase II alpha |
|
chr20_+_27020201 Show fit | 1.24 |
ENSDART00000126919
ENSDART00000016014 |
chromogranin A |
|
chr4_-_22207873 Show fit | 1.12 |
ENSDART00000142140
|
protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 |
|
chr5_+_49744713 Show fit | 0.97 |
ENSDART00000133384
|
nuclear receptor subfamily 2, group F, member 1a |
|
chr11_-_23080970 Show fit | 0.92 |
ENSDART00000127791
|
ATPase plasma membrane Ca2+ transporting 2 |
|
chr25_-_8030113 Show fit | 0.83 |
ENSDART00000104674
|
calcium/calmodulin-dependent protein kinase 1Db |
|
chr21_-_21089781 Show fit | 0.78 |
ENSDART00000144361
|
ankyrin 1, erythrocytic b |
|
chr21_+_44300689 Show fit | 0.74 |
ENSDART00000186298
ENSDART00000142810 |
gamma-aminobutyric acid (GABA) A receptor, alpha 3 |
|
chr25_-_8030425 Show fit | 0.73 |
ENSDART00000014964
|
calcium/calmodulin-dependent protein kinase 1Db |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 1.3 | GO:0060080 | inhibitory postsynaptic potential(GO:0060080) |
0.0 | 1.3 | GO:0003146 | heart jogging(GO:0003146) |
0.4 | 1.2 | GO:0002792 | negative regulation of peptide secretion(GO:0002792) negative regulation of peptide hormone secretion(GO:0090278) |
0.1 | 1.2 | GO:0031998 | regulation of fatty acid beta-oxidation(GO:0031998) |
0.0 | 1.2 | GO:0035622 | intrahepatic bile duct development(GO:0035622) |
0.1 | 1.0 | GO:0055011 | atrial cardiac muscle cell differentiation(GO:0055011) |
0.2 | 0.7 | GO:0098921 | endocannabinoid signaling pathway(GO:0071926) retrograde trans-synaptic signaling by lipid(GO:0098920) retrograde trans-synaptic signaling by endocannabinoid(GO:0098921) |
0.0 | 0.7 | GO:0051932 | synaptic transmission, GABAergic(GO:0051932) |
0.0 | 0.6 | GO:0050962 | detection of light stimulus involved in visual perception(GO:0050908) detection of light stimulus involved in sensory perception(GO:0050962) |
0.0 | 0.6 | GO:0015701 | bicarbonate transport(GO:0015701) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.2 | GO:0042583 | chromaffin granule(GO:0042583) |
0.1 | 1.2 | GO:0032591 | dendritic spine membrane(GO:0032591) |
0.0 | 1.2 | GO:0005741 | mitochondrial outer membrane(GO:0005741) |
0.0 | 0.9 | GO:0098839 | postsynaptic density membrane(GO:0098839) postsynaptic specialization membrane(GO:0099634) |
0.0 | 0.7 | GO:0032589 | neuron projection membrane(GO:0032589) dendrite membrane(GO:0032590) |
0.0 | 0.6 | GO:0032420 | stereocilium(GO:0032420) |
0.0 | 0.3 | GO:0097431 | mitotic spindle pole(GO:0097431) |
0.0 | 0.2 | GO:0044233 | ER-mitochondrion membrane contact site(GO:0044233) |
0.0 | 0.2 | GO:0072546 | ER membrane protein complex(GO:0072546) |
0.0 | 0.2 | GO:1990246 | uniplex complex(GO:1990246) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.3 | GO:0004683 | calmodulin-dependent protein kinase activity(GO:0004683) |
0.2 | 1.2 | GO:0004095 | carnitine O-palmitoyltransferase activity(GO:0004095) O-palmitoyltransferase activity(GO:0016416) |
0.0 | 0.9 | GO:0005388 | calcium-transporting ATPase activity(GO:0005388) |
0.1 | 0.8 | GO:0030507 | spectrin binding(GO:0030507) |
0.1 | 0.7 | GO:0004465 | lipoprotein lipase activity(GO:0004465) |
0.1 | 0.7 | GO:0008503 | benzodiazepine receptor activity(GO:0008503) GABA-gated chloride ion channel activity(GO:0022851) |
0.1 | 0.6 | GO:0046592 | polyamine oxidase activity(GO:0046592) |
0.0 | 0.6 | GO:0008510 | sodium:bicarbonate symporter activity(GO:0008510) |
0.0 | 0.6 | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity(GO:0004198) |
0.0 | 0.4 | GO:0003873 | 6-phosphofructo-2-kinase activity(GO:0003873) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.3 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
0.1 | 1.2 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.0 | 0.7 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.0 | 0.3 | PID RAS PATHWAY | Regulation of Ras family activation |
0.0 | 0.3 | SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES | Genes related to the insulin receptor pathway |
0.0 | 0.2 | PID VEGF VEGFR PATHWAY | VEGF and VEGFR signaling network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 1.3 | REACTOME UNBLOCKING OF NMDA RECEPTOR GLUTAMATE BINDING AND ACTIVATION | Genes involved in Unblocking of NMDA receptor, glutamate binding and activation |
0.0 | 0.9 | REACTOME PLATELET CALCIUM HOMEOSTASIS | Genes involved in Platelet calcium homeostasis |
0.0 | 0.7 | REACTOME GABA A RECEPTOR ACTIVATION | Genes involved in GABA A receptor activation |
0.0 | 0.7 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |
0.0 | 0.6 | REACTOME METABOLISM OF POLYAMINES | Genes involved in Metabolism of polyamines |
0.0 | 0.5 | REACTOME RECYCLING PATHWAY OF L1 | Genes involved in Recycling pathway of L1 |
0.0 | 0.2 | REACTOME ACYL CHAIN REMODELLING OF PI | Genes involved in Acyl chain remodelling of PI |
0.0 | 0.2 | REACTOME VEGF LIGAND RECEPTOR INTERACTIONS | Genes involved in VEGF ligand-receptor interactions |