PRJNA207719: Tissue specific transcriptome profiling
Gene Symbol | Gene ID | Gene Info |
---|---|---|
sox8b
|
ENSDARG00000037782 | SRY-box transcription factor 8b |
sox8a
|
ENSDARG00000105301 | SRY-box transcription factor 8a |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
sox8a | dr11_v1_chr12_-_1085227_1085227 | 0.59 | 2.9e-01 | Click! |
sox8b | dr11_v1_chr3_-_62403550_62403550 | -0.45 | 4.5e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr23_+_4890693 | 0.30 |
ENSDART00000023537
|
tnnc1a
|
troponin C type 1a (slow) |
chr23_-_35694171 | 0.25 |
ENSDART00000077539
|
tuba1c
|
tubulin, alpha 1c |
chr10_+_5268054 | 0.16 |
ENSDART00000114491
|
ror2
|
receptor tyrosine kinase-like orphan receptor 2 |
chr19_+_33553586 | 0.16 |
ENSDART00000183477
|
runx1t1
|
runt-related transcription factor 1; translocated to, 1 (cyclin D-related) |
chr20_-_39273987 | 0.15 |
ENSDART00000127173
|
clu
|
clusterin |
chr7_+_73780936 | 0.14 |
ENSDART00000092691
|
pea15
|
proliferation and apoptosis adaptor protein 15 |
chr2_+_9946121 | 0.13 |
ENSDART00000100696
|
tsen15
|
TSEN15 tRNA splicing endonuclease subunit |
chr12_-_33359654 | 0.13 |
ENSDART00000001907
|
slc16a3
|
solute carrier family 16 (monocarboxylate transporter), member 3 |
chr20_-_39273505 | 0.13 |
ENSDART00000153114
|
clu
|
clusterin |
chr19_+_27448625 | 0.13 |
ENSDART00000052352
|
ppp1r11
|
protein phosphatase 1, regulatory (inhibitor) subunit 11 |
chr12_-_33359052 | 0.12 |
ENSDART00000135943
|
slc16a3
|
solute carrier family 16 (monocarboxylate transporter), member 3 |
chr10_-_43334914 | 0.12 |
ENSDART00000146660
ENSDART00000190288 |
hapln1b
|
hyaluronan and proteoglycan link protein 1b |
chr23_-_27235403 | 0.12 |
ENSDART00000134418
|
si:dkey-157g16.6
|
si:dkey-157g16.6 |
chr2_+_23222939 | 0.12 |
ENSDART00000026800
|
kifap3b
|
kinesin-associated protein 3b |
chr14_+_6546516 | 0.11 |
ENSDART00000097214
|
adam19b
|
ADAM metallopeptidase domain 19b |
chr1_+_25801648 | 0.11 |
ENSDART00000129471
|
gucy1b1
|
guanylate cyclase 1 soluble subunit beta 1 |
chr7_-_52849913 | 0.10 |
ENSDART00000174133
ENSDART00000172951 |
map1aa
|
microtubule-associated protein 1Aa |
chr9_-_43538328 | 0.10 |
ENSDART00000140526
|
znf385b
|
zinc finger protein 385B |
chr19_-_27448606 | 0.09 |
ENSDART00000079251
|
vars2
|
valyl-tRNA synthetase 2, mitochondrial (putative) |
chr11_-_43226255 | 0.09 |
ENSDART00000172929
|
sptbn1
|
spectrin, beta, non-erythrocytic 1 |
chr13_-_44423 | 0.09 |
ENSDART00000093247
|
gtf2a1l
|
general transcription factor IIA, 1-like |
chr12_+_30705769 | 0.09 |
ENSDART00000186448
ENSDART00000066259 |
kcnk1a
|
potassium channel, subfamily K, member 1a |
chr22_-_38621438 | 0.09 |
ENSDART00000098330
|
nppc
|
natriuretic peptide C |
chr19_+_11432330 | 0.09 |
ENSDART00000188065
|
PQLC1
|
PQ loop repeat containing 1 |
chr12_-_11593436 | 0.09 |
ENSDART00000138954
|
plekha1b
|
pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1b |
chr20_-_29505863 | 0.08 |
ENSDART00000148278
|
klf11a
|
Kruppel-like factor 11a |
chr7_+_25003851 | 0.08 |
ENSDART00000144526
|
naa40
|
N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) |
chr12_+_30706158 | 0.08 |
ENSDART00000133869
|
kcnk1a
|
potassium channel, subfamily K, member 1a |
chr16_+_25095483 | 0.08 |
ENSDART00000155032
|
si:ch211-261d7.3
|
si:ch211-261d7.3 |
chr19_+_12801940 | 0.08 |
ENSDART00000040073
|
mc5ra
|
melanocortin 5a receptor |
chr24_-_21923930 | 0.08 |
ENSDART00000131944
|
tagln3b
|
transgelin 3b |
chr21_+_43669943 | 0.08 |
ENSDART00000136025
|
tmlhe
|
trimethyllysine hydroxylase, epsilon |
chr9_-_3034064 | 0.08 |
ENSDART00000115138
ENSDART00000144046 |
rapgef4
|
Rap guanine nucleotide exchange factor (GEF) 4 |
chr23_+_17878969 | 0.08 |
ENSDART00000154934
ENSDART00000154140 ENSDART00000156331 |
si:ch73-390p7.2
|
si:ch73-390p7.2 |
chr20_-_37522569 | 0.08 |
ENSDART00000177011
ENSDART00000058502 |
hivep2a
|
human immunodeficiency virus type I enhancer binding protein 2a |
chr17_+_24687338 | 0.08 |
ENSDART00000135794
|
selenon
|
selenoprotein N |
chr1_+_38362412 | 0.07 |
ENSDART00000075086
|
cep44
|
centrosomal protein 44 |
chr16_-_21047872 | 0.07 |
ENSDART00000131582
|
cbx3b
|
chromobox homolog 3b |
chr18_-_20869175 | 0.07 |
ENSDART00000090079
|
synm
|
synemin, intermediate filament protein |
chr21_+_39705483 | 0.07 |
ENSDART00000147718
ENSDART00000168996 |
plrdgb
|
PITP-less RdgB-like protein |
chr5_+_41146786 | 0.07 |
ENSDART00000175766
|
sub1b
|
SUB1 homolog, transcriptional regulator b |
chr11_-_30138299 | 0.07 |
ENSDART00000172106
|
scml2
|
Scm polycomb group protein like 2 |
chr3_-_5067585 | 0.07 |
ENSDART00000169609
|
tefb
|
thyrotrophic embryonic factor b |
chr21_+_32820175 | 0.07 |
ENSDART00000076903
|
adra2db
|
adrenergic, alpha-2D-, receptor b |
chr7_+_17096281 | 0.07 |
ENSDART00000035558
|
htatip2
|
HIV-1 Tat interactive protein 2 |
chr10_-_22249444 | 0.06 |
ENSDART00000148831
|
fgf11b
|
fibroblast growth factor 11b |
chr20_+_30578967 | 0.06 |
ENSDART00000010494
|
fgfr1op
|
FGFR1 oncogene partner |
chr10_+_15967643 | 0.06 |
ENSDART00000136709
|
apbb1
|
amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65) |
chr5_-_54300725 | 0.06 |
ENSDART00000163048
|
slc25a35
|
solute carrier family 25, member 35 |
chr9_+_17423941 | 0.06 |
ENSDART00000112884
ENSDART00000155233 |
kbtbd7
|
kelch repeat and BTB (POZ) domain containing 7 |
chr17_+_24604373 | 0.06 |
ENSDART00000082193
|
zmpste24
|
zinc metallopeptidase, STE24 homolog |
chr17_+_14784275 | 0.06 |
ENSDART00000005355
|
rtraf
|
RNA transcription, translation and transport factor |
chr21_+_34088377 | 0.06 |
ENSDART00000170070
|
mtmr1b
|
myotubularin related protein 1b |
chr12_+_18544159 | 0.06 |
ENSDART00000162900
|
mlst8
|
MTOR associated protein, LST8 homolog (S. cerevisiae) |
chr14_+_597532 | 0.05 |
ENSDART00000159805
|
LO018568.2
|
|
chr3_+_32663865 | 0.05 |
ENSDART00000190240
|
si:dkey-16l2.16
|
si:dkey-16l2.16 |
chr11_-_18015534 | 0.05 |
ENSDART00000181953
|
qrich1
|
glutamine-rich 1 |
chr10_-_14545658 | 0.05 |
ENSDART00000057865
|
ier3ip1
|
immediate early response 3 interacting protein 1 |
chr9_+_41156818 | 0.05 |
ENSDART00000105764
ENSDART00000147052 |
stat4
|
signal transducer and activator of transcription 4 |
chr11_+_30254556 | 0.05 |
ENSDART00000182316
|
ppef1
|
protein phosphatase, EF-hand calcium binding domain 1 |
chr23_-_36418708 | 0.04 |
ENSDART00000132273
|
znf740b
|
zinc finger protein 740b |
chr17_+_38476300 | 0.04 |
ENSDART00000123298
|
stard9
|
StAR-related lipid transfer (START) domain containing 9 |
chr18_+_5917625 | 0.04 |
ENSDART00000169100
|
glg1b
|
golgi glycoprotein 1b |
chr9_+_23714406 | 0.04 |
ENSDART00000189445
|
gypc
|
glycophorin C (Gerbich blood group) |
chr19_-_11950434 | 0.04 |
ENSDART00000024861
|
cpsf1
|
cleavage and polyadenylation specific factor 1 |
chr21_-_13535601 | 0.04 |
ENSDART00000139568
|
nsmfa
|
NMDA receptor synaptonuclear signaling and neuronal migration factor a |
chr3_-_59981476 | 0.04 |
ENSDART00000035878
ENSDART00000124038 |
cdr2l
|
cerebellar degeneration-related protein 2-like |
chr19_-_11949996 | 0.04 |
ENSDART00000163478
ENSDART00000167299 |
cpsf1
|
cleavage and polyadenylation specific factor 1 |
chr24_-_41220538 | 0.03 |
ENSDART00000150207
|
acvr2ba
|
activin A receptor type 2Ba |
chr16_-_21047483 | 0.03 |
ENSDART00000136235
|
cbx3b
|
chromobox homolog 3b |
chr24_-_3304664 | 0.03 |
ENSDART00000183168
|
sugct
|
succinyl-CoA:glutarate-CoA transferase |
chr15_-_9419472 | 0.03 |
ENSDART00000122117
|
sacs
|
sacsin molecular chaperone |
chr25_-_37248795 | 0.03 |
ENSDART00000087247
ENSDART00000154045 |
glg1a
|
golgi glycoprotein 1a |
chr3_-_59981162 | 0.03 |
ENSDART00000128790
|
cdr2l
|
cerebellar degeneration-related protein 2-like |
chr7_-_50410524 | 0.03 |
ENSDART00000083346
|
hypk
|
huntingtin interacting protein K |
chr5_+_45138934 | 0.03 |
ENSDART00000041412
ENSDART00000136002 |
smarca2
|
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 |
chr13_-_8892514 | 0.03 |
ENSDART00000144553
|
plekhh2
|
pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 |
chr2_+_51645164 | 0.03 |
ENSDART00000169600
|
abhd4
|
abhydrolase domain containing 4 |
chr3_+_41726360 | 0.03 |
ENSDART00000154401
|
chst12a
|
carbohydrate (chondroitin 4) sulfotransferase 12a |
chr8_+_41238064 | 0.03 |
ENSDART00000111321
|
zgc:152830
|
zgc:152830 |
chr1_-_16688965 | 0.03 |
ENSDART00000079001
ENSDART00000178599 |
frg1
|
FSHD region gene 1 |
chr22_-_817479 | 0.03 |
ENSDART00000123487
|
zgc:153675
|
zgc:153675 |
chr8_-_14052349 | 0.02 |
ENSDART00000135811
|
atp2b3a
|
ATPase plasma membrane Ca2+ transporting 3a |
chr7_-_18547420 | 0.02 |
ENSDART00000173969
|
rgs12a
|
regulator of G protein signaling 12a |
chr10_+_7709724 | 0.02 |
ENSDART00000097670
|
ggcx
|
gamma-glutamyl carboxylase |
chr20_+_54383838 | 0.02 |
ENSDART00000157737
|
lrfn5b
|
leucine rich repeat and fibronectin type III domain containing 5b |
chr8_+_10862353 | 0.02 |
ENSDART00000140717
|
brpf3b
|
bromodomain and PHD finger containing, 3b |
chr10_+_11398111 | 0.02 |
ENSDART00000064210
|
cwc27
|
CWC27 spliceosome-associated protein homolog (S. cerevisiae) |
chr19_+_3653976 | 0.02 |
ENSDART00000125673
|
nedd9
|
neural precursor cell expressed, developmentally down-regulated 9 |
chr10_+_9595575 | 0.02 |
ENSDART00000091780
ENSDART00000184287 |
rc3h2
|
ring finger and CCCH-type domains 2 |
chr1_+_6646529 | 0.02 |
ENSDART00000144641
ENSDART00000103701 ENSDART00000138919 |
ube2f
|
ubiquitin-conjugating enzyme E2F (putative) |
chr15_+_3125136 | 0.02 |
ENSDART00000130968
|
rcbtb2
|
regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 |
chr16_+_46111849 | 0.02 |
ENSDART00000172232
|
sv2a
|
synaptic vesicle glycoprotein 2A |
chr3_+_62327332 | 0.01 |
ENSDART00000158414
|
BX470259.1
|
|
chr7_+_52753067 | 0.01 |
ENSDART00000053814
|
mtfmt
|
mitochondrial methionyl-tRNA formyltransferase |
chr24_-_33873451 | 0.01 |
ENSDART00000159840
|
asic1c
|
acid-sensing (proton-gated) ion channel 1c |
chr11_+_13176568 | 0.01 |
ENSDART00000125371
ENSDART00000123257 |
mknk1
|
MAP kinase interacting serine/threonine kinase 1 |
chr3_+_39579393 | 0.01 |
ENSDART00000055170
|
cln3
|
ceroid-lipofuscinosis, neuronal 3 |
chr9_-_23147026 | 0.01 |
ENSDART00000167266
|
lypd6b
|
LY6/PLAUR domain containing 6B |
chr15_-_43327911 | 0.01 |
ENSDART00000077386
|
prss16
|
protease, serine, 16 (thymus) |
chr4_+_6833583 | 0.01 |
ENSDART00000165179
ENSDART00000186134 ENSDART00000174507 |
dock4b
|
dedicator of cytokinesis 4b |
chr20_-_3276339 | 0.00 |
ENSDART00000166831
|
rps6kc1
|
ribosomal protein S6 kinase polypeptide 1 |
chr21_+_34088110 | 0.00 |
ENSDART00000145123
ENSDART00000029599 ENSDART00000147519 |
mtmr1b
|
myotubularin related protein 1b |
chr22_+_9522971 | 0.00 |
ENSDART00000110048
|
strip1
|
striatin interacting protein 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.1 | GO:0099548 | trans-synaptic signaling by soluble gas(GO:0099543) trans-synaptic signaling by nitric oxide(GO:0099548) |
0.0 | 0.2 | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation(GO:0006388) |
0.0 | 0.1 | GO:0032515 | negative regulation of phosphoprotein phosphatase activity(GO:0032515) |
0.0 | 0.3 | GO:0014823 | response to activity(GO:0014823) |
0.0 | 0.1 | GO:0071881 | adenylate cyclase-inhibiting adrenergic receptor signaling pathway(GO:0071881) |
0.0 | 0.1 | GO:0045329 | carnitine biosynthetic process(GO:0045329) |
0.0 | 0.1 | GO:0050848 | regulation of calcium-mediated signaling(GO:0050848) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | GO:0042583 | chromaffin granule(GO:0042583) |
0.0 | 0.1 | GO:0005672 | transcription factor TFIIA complex(GO:0005672) |
0.0 | 0.1 | GO:0008091 | spectrin(GO:0008091) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | GO:0015129 | lactate transmembrane transporter activity(GO:0015129) |
0.0 | 0.1 | GO:0043998 | H2A histone acetyltransferase activity(GO:0043998) |
0.0 | 0.1 | GO:0004865 | protein serine/threonine phosphatase inhibitor activity(GO:0004865) |
0.0 | 0.2 | GO:0015271 | outward rectifier potassium channel activity(GO:0015271) |
0.0 | 0.1 | GO:0004938 | alpha2-adrenergic receptor activity(GO:0004938) |
0.0 | 0.3 | GO:0048306 | calcium-dependent protein binding(GO:0048306) |
0.0 | 0.3 | GO:0051787 | misfolded protein binding(GO:0051787) |
0.0 | 0.1 | GO:0004977 | melanocortin receptor activity(GO:0004977) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS | Genes involved in Bile salt and organic anion SLC transporters |
0.0 | 0.2 | REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY | Genes involved in Post-chaperonin tubulin folding pathway |