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PRJNA207719: Tissue specific transcriptome profiling

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Results for vox

Z-value: 0.64

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Transcription factors associated with vox

Gene Symbol Gene ID Gene Info
vox
ENSDARG00000099761 ventral homeobox

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
voxdr11_v1_chr13_-_50624173_50624173-0.543.5e-01Click!

Activity profile of vox motif

Sorted Z-values of vox motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr6_-_54815886 0.76 ENSDART00000180793
ENSDART00000007498
tnni1b
troponin I type 1b (skeletal, slow)
chr18_+_8346920 0.38 ENSDART00000083421
cpt1b
carnitine palmitoyltransferase 1B (muscle)
chr21_-_32097908 0.35 ENSDART00000147387
si:ch211-160j14.3
si:ch211-160j14.3
chr16_-_17197546 0.31 ENSDART00000139939
ENSDART00000135146
ENSDART00000063800
ENSDART00000163606
gapdh
glyceraldehyde-3-phosphate dehydrogenase
chr25_+_5035343 0.29 ENSDART00000011751
parvb
parvin, beta
chr10_+_32104305 0.28 ENSDART00000099880
wnt11r
wingless-type MMTV integration site family, member 11, related
chr23_+_20110086 0.26 ENSDART00000054664
tnnc1b
troponin C type 1b (slow)
chr6_-_7720332 0.26 ENSDART00000135945
rpsa
ribosomal protein SA
chr7_-_45999333 0.23 ENSDART00000158603
si:ch211-260e23.8
si:ch211-260e23.8
chr13_+_33688474 0.21 ENSDART00000161465
CABZ01087953.1

chr5_+_19343880 0.21 ENSDART00000148130
acacb
acetyl-CoA carboxylase beta
chr7_-_23768234 0.21 ENSDART00000173981
si:ch211-200p22.4
si:ch211-200p22.4
chr22_+_16308450 0.20 ENSDART00000105678
lrrc39
leucine rich repeat containing 39
chr10_+_21867307 0.20 ENSDART00000126629
cbln17
cerebellin 17
chr18_+_48423973 0.19 ENSDART00000184233
ENSDART00000147074
fli1a
Fli-1 proto-oncogene, ETS transcription factor a
chr17_+_50701748 0.18 ENSDART00000191938
ENSDART00000183220
ENSDART00000049464
fermt2
fermitin family member 2
chr11_+_11303458 0.17 ENSDART00000162486
ENSDART00000160703
si:dkey-23f9.4
si:dkey-23f9.4
chr9_+_21402863 0.17 ENSDART00000125357
cx30.3
connexin 30.3
chr20_-_37813863 0.17 ENSDART00000147529
batf3
basic leucine zipper transcription factor, ATF-like 3
chr15_+_41027466 0.16 ENSDART00000075940
mtnr1ba
melatonin receptor type 1Ba
chr6_-_39649504 0.16 ENSDART00000179960
ENSDART00000190951
larp4ab
La ribonucleoprotein domain family, member 4Ab
chr23_-_7674902 0.16 ENSDART00000185612
ENSDART00000180524
plagl2
pleiomorphic adenoma gene-like 2
chr6_-_35401282 0.15 ENSDART00000127612
rgs5a
regulator of G protein signaling 5a
chr17_+_44697604 0.14 ENSDART00000156625
pgfb
placental growth factor b
chr2_-_48171112 0.14 ENSDART00000156258
pfkpb
phosphofructokinase, platelet b
chr5_-_29671586 0.14 ENSDART00000098336
spaca9
sperm acrosome associated 9
chr21_-_17296789 0.13 ENSDART00000192180
gfi1b
growth factor independent 1B transcription repressor
chr20_-_49704915 0.13 ENSDART00000189232
COX7A2 (1 of many)
cytochrome c oxidase subunit 7A2
chr7_+_25033924 0.13 ENSDART00000170873
sb:cb1058
sb:cb1058
chr2_-_48171441 0.12 ENSDART00000123040
pfkpb
phosphofructokinase, platelet b
chr5_-_42878178 0.12 ENSDART00000162981
CXCL11 (1 of many)
C-X-C motif chemokine ligand 11
chr13_-_7233811 0.12 ENSDART00000162026
ninl
ninein-like
chr12_+_23812530 0.12 ENSDART00000066331
svila
supervillin a
chr15_+_5360407 0.11 ENSDART00000110420
or112-1
odorant receptor, family A, subfamily 112, member 1
chr23_-_9991060 0.11 ENSDART00000111518
plxnb1a
plexin b1a
chr1_-_17715493 0.11 ENSDART00000133027
si:dkey-256e7.8
si:dkey-256e7.8
chr2_-_23411368 0.11 ENSDART00000159495
si:ch73-129a22.11
si:ch73-129a22.11
chr5_-_25733745 0.11 ENSDART00000051566
zgc:101016
zgc:101016
chr22_-_7457247 0.11 ENSDART00000106081
BX511034.2

chr20_+_37295006 0.10 ENSDART00000153137
cx23
connexin 23
chr1_-_22691182 0.10 ENSDART00000076766
fgfbp2b
fibroblast growth factor binding protein 2b
chr15_+_29662401 0.10 ENSDART00000135540
nrip1a
nuclear receptor interacting protein 1a
chr18_+_35173683 0.10 ENSDART00000192545
cfap45
cilia and flagella associated protein 45
chr9_+_21358941 0.10 ENSDART00000147619
ENSDART00000059402
eef1akmt1
EEF1A lysine methyltransferase 1
chr11_-_33868881 0.10 ENSDART00000163295
ENSDART00000172633
ENSDART00000171439
si:ch211-227n13.3
si:ch211-227n13.3
chr6_-_52348562 0.09 ENSDART00000142565
ENSDART00000145369
ENSDART00000016890
eif6
eukaryotic translation initiation factor 6
chr17_+_17764979 0.09 ENSDART00000105013
alkbh1
alkB homolog 1, histone H2A dioxygenase
chr21_+_39948300 0.09 ENSDART00000137740
slc47a1
solute carrier family 47 (multidrug and toxin extrusion), member 1
chr18_+_1837668 0.09 ENSDART00000164210
CABZ01079192.1

chr7_+_48667081 0.09 ENSDART00000083473
trpm5
transient receptor potential cation channel, subfamily M, member 5
chr8_-_39822917 0.09 ENSDART00000067843
zgc:162025
zgc:162025
chr22_+_2198915 0.08 ENSDART00000162347
znf1166
zinc finger protein 1166
chr16_+_42471455 0.08 ENSDART00000166640
si:ch211-215k15.5
si:ch211-215k15.5
chr12_-_7157527 0.08 ENSDART00000152274
si:dkey-187i8.2
si:dkey-187i8.2
chr7_+_6652967 0.08 ENSDART00000102681
pnp5a
purine nucleoside phosphorylase 5a
chr1_-_55263736 0.08 ENSDART00000152504
ENSDART00000152687
si:ch211-286b5.4
si:ch211-286b5.4
chr19_+_46158078 0.08 ENSDART00000183933
ENSDART00000164055
cap2
CAP, adenylate cyclase-associated protein, 2 (yeast)
chr2_-_10896745 0.08 ENSDART00000114609
cdcp2
CUB domain containing protein 2
chr15_+_3790556 0.08 ENSDART00000181467
RNF14 (1 of many)
ring finger protein 14
chr3_-_32337653 0.08 ENSDART00000156918
ENSDART00000156551
si:dkey-16p21.8
si:dkey-16p21.8
chr20_+_26966725 0.08 ENSDART00000029781
ahsa1a
AHA1, activator of heat shock protein ATPase homolog 1a
chr20_-_43771871 0.07 ENSDART00000153304
matn3a
matrilin 3a
chr10_-_35149513 0.07 ENSDART00000063434
ENSDART00000131291
ripk4
receptor-interacting serine-threonine kinase 4
chr24_+_19415124 0.07 ENSDART00000186931
sulf1
sulfatase 1
chr21_+_15713097 0.07 ENSDART00000015841
gstt1b
glutathione S-transferase theta 1b
chr22_-_17474583 0.07 ENSDART00000148027
si:ch211-197g15.8
si:ch211-197g15.8
chr22_+_6905210 0.07 ENSDART00000167530
CABZ01065328.2

chr5_-_64883082 0.07 ENSDART00000064983
ENSDART00000139066
krt1-c5
keratin, type 1, gene c5
chr10_-_8046764 0.07 ENSDART00000099031
zgc:136254
zgc:136254
chr2_-_39558643 0.06 ENSDART00000139860
ENSDART00000145231
ENSDART00000141721
cbln7
cerebellin 7
chr20_+_35484070 0.06 ENSDART00000026234
ENSDART00000141675
mep1a.2
meprin A, alpha (PABA peptide hydrolase), tandem duplicate 2
chr7_-_44957503 0.06 ENSDART00000165077
cdh16
cadherin 16, KSP-cadherin
chr5_+_38752287 0.06 ENSDART00000133571
cxcl11.8
chemokine (C-X-C motif) ligand 11, duplicate 8
chr19_+_31541607 0.06 ENSDART00000181604
gmnn
geminin, DNA replication inhibitor
chr13_-_33227411 0.06 ENSDART00000057386
golga5
golgin A5
chr11_-_6877973 0.06 ENSDART00000160271
ddx49
DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
chr10_+_28160265 0.06 ENSDART00000022484
rnft1
ring finger protein, transmembrane 1
chr11_+_24703108 0.06 ENSDART00000159173
gpr25
G protein-coupled receptor 25
chr12_-_13729263 0.06 ENSDART00000078021
foxh1
forkhead box H1
chr21_+_21812311 0.06 ENSDART00000151253
neu3.4
sialidase 3 (membrane sialidase), tandem duplicate 4
chr22_-_22337382 0.06 ENSDART00000144684
si:ch211-129c21.1
si:ch211-129c21.1
chr16_-_21799407 0.06 ENSDART00000123717
FP015862.4

chr15_+_20344670 0.06 ENSDART00000158986
plekhg2
pleckstrin homology domain containing, family G (with RhoGef domain) member 2
chr15_-_38154616 0.06 ENSDART00000099392
irgq2
immunity-related GTPase family, q2
chr8_-_5220125 0.05 ENSDART00000035676
bnip3la
BCL2 interacting protein 3 like a
chr3_-_34084387 0.05 ENSDART00000155365
ighv4-3
immunoglobulin heavy variable 4-3
chr4_+_32384950 0.05 ENSDART00000151910
zgc:174698
zgc:174698
chr10_-_40968095 0.05 ENSDART00000184104
npffr1l1
neuropeptide FF receptor 1 like 1
chr17_+_33311784 0.05 ENSDART00000156229
si:ch211-132f19.7
si:ch211-132f19.7
chr4_-_67800414 0.05 ENSDART00000160213
si:ch211-66c13.1
si:ch211-66c13.1
chr21_+_20396858 0.05 ENSDART00000003299
ENSDART00000146615
zgc:103482
zgc:103482
chr2_+_49799470 0.05 ENSDART00000146325
si:ch211-190k17.19
si:ch211-190k17.19
chr2_+_33747509 0.05 ENSDART00000134187
si:dkey-31m5.5
si:dkey-31m5.5
chr4_+_35594200 0.05 ENSDART00000193902
si:dkeyp-4c4.2
si:dkeyp-4c4.2
chr25_+_31868268 0.05 ENSDART00000022325
parp16
poly (ADP-ribose) polymerase family, member 16
chr5_+_56268436 0.05 ENSDART00000021159
lhx1b
LIM homeobox 1b
chr19_+_7735157 0.05 ENSDART00000186717
tuft1b
tuftelin 1b
chr12_-_19119176 0.05 ENSDART00000149180
aco2
aconitase 2, mitochondrial
chr2_-_2451181 0.05 ENSDART00000101033
pth1ra
parathyroid hormone 1 receptor a
chr4_+_32385395 0.04 ENSDART00000109176
zgc:174698
zgc:174698
chr8_+_11471350 0.04 ENSDART00000092355
ENSDART00000136184
tjp2b
tight junction protein 2b (zona occludens 2)
chr1_+_57311901 0.04 ENSDART00000149397
mycbpap
mycbp associated protein
chr2_-_28671139 0.04 ENSDART00000165272
ENSDART00000164657
dhcr7
7-dehydrocholesterol reductase
chr21_-_40317035 0.04 ENSDART00000143648
ENSDART00000013359
or101-1
odorant receptor, family B, subfamily 101, member 1
chr12_-_18414536 0.04 ENSDART00000132956
ENSDART00000078724
atpaf2
ATP synthase mitochondrial F1 complex assembly factor 2
chr22_+_7738966 0.04 ENSDART00000147073
si:ch73-44m9.5
si:ch73-44m9.5
chr4_-_50930346 0.04 ENSDART00000184245
si:ch211-208f21.3
si:ch211-208f21.3
chr22_+_2198246 0.04 ENSDART00000165168
ENSDART00000157485
ENSDART00000168713
znf1157
znf1166
zinc finger protein 1157
zinc finger protein 1166
chr1_-_11596829 0.04 ENSDART00000140725
si:dkey-26i13.7
si:dkey-26i13.7
chr11_+_2391649 0.03 ENSDART00000104571
igfbp6a
insulin-like growth factor binding protein 6a
chr13_+_8677166 0.03 ENSDART00000181016
ENSDART00000135028
prop1
PROP paired-like homeobox 1
chr6_-_39275793 0.03 ENSDART00000180477
ENSDART00000148531
arhgef25b
Rho guanine nucleotide exchange factor (GEF) 25b
chr17_-_33289304 0.03 ENSDART00000135118
ENSDART00000040346
efr3ba
EFR3 homolog Ba (S. cerevisiae)
chr8_+_11325310 0.03 ENSDART00000142577
fxn
frataxin
chr7_-_34262080 0.03 ENSDART00000183246
si:ch211-98n17.5
si:ch211-98n17.5
chr4_-_49119557 0.03 ENSDART00000150263
znf1036
zinc finger protein 1036
chr25_-_18953322 0.03 ENSDART00000155927
si:ch211-68a17.7
si:ch211-68a17.7
chr22_-_36530902 0.03 ENSDART00000056188
polr2h
info polymerase (RNA) II (DNA directed) polypeptide H
chr14_-_33105434 0.03 ENSDART00000163795
dlg3
discs, large homolog 3 (Drosophila)
chr10_+_11265387 0.03 ENSDART00000038888
hsdl2
hydroxysteroid dehydrogenase like 2
chr11_+_2391469 0.03 ENSDART00000182121
igfbp6a
insulin-like growth factor binding protein 6a
chr21_+_6751760 0.03 ENSDART00000135914
olfm1b
olfactomedin 1b
chr25_-_21507676 0.03 ENSDART00000010706
immp2l
inner mitochondrial membrane peptidase subunit 2
chr3_-_36690348 0.03 ENSDART00000192513
myh11b
myosin, heavy chain 11b, smooth muscle
chr23_+_41679586 0.03 ENSDART00000067662
CU914487.1

chr9_-_52962521 0.03 ENSDART00000170419
CU855885.1

chr3_+_16724614 0.03 ENSDART00000182135
gys1
glycogen synthase 1 (muscle)
chr2_+_54798689 0.02 ENSDART00000183426
twsg1a
twisted gastrulation BMP signaling modulator 1a
chr7_+_66048102 0.02 ENSDART00000104523
arntl1b
aryl hydrocarbon receptor nuclear translocator-like 1b
chr5_+_7989210 0.02 ENSDART00000168071
gdnfb
glial cell derived neurotrophic factor b
chr15_-_18200358 0.02 ENSDART00000158569
si:ch211-247l8.8
si:ch211-247l8.8
chr3_-_34586403 0.02 ENSDART00000151515
sept9a
septin 9a
chr16_-_7443388 0.02 ENSDART00000017445
prdm1a
PR domain containing 1a, with ZNF domain
chr3_-_33971297 0.02 ENSDART00000151682
ighj2-1
immunoglobulin heavy joining 2-1
chr4_+_54645654 0.02 ENSDART00000192864
si:ch211-227e10.1
si:ch211-227e10.1
chr3_-_38783951 0.02 ENSDART00000155518
znf281a
zinc finger protein 281a
chr22_-_17474781 0.02 ENSDART00000186817
si:ch211-197g15.8
si:ch211-197g15.8
chr4_+_49322310 0.01 ENSDART00000184154
ENSDART00000167162
BX942819.1

chr20_-_34663209 0.01 ENSDART00000132545
slc25a24
solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
chr19_-_7690975 0.01 ENSDART00000151384
si:dkey-204a24.10
si:dkey-204a24.10
chr4_-_41712014 0.01 ENSDART00000138165
znf976
zinc finger protein 976
chr16_-_39477509 0.01 ENSDART00000191330
stt3b
STT3B, subunit of the oligosaccharyltransferase complex (catalytic)
chr5_+_28160503 0.01 ENSDART00000051516
tacr1a
tachykinin receptor 1a
chr7_-_59210882 0.01 ENSDART00000170330
ENSDART00000158996
nagk
N-acetylglucosamine kinase
chr10_-_35257458 0.01 ENSDART00000143890
ENSDART00000139107
ENSDART00000082445
prr11
proline rich 11
chr1_+_27023687 0.01 ENSDART00000189093
bnc2
basonuclin 2
chr24_+_6107901 0.01 ENSDART00000156419
si:ch211-37e10.2
si:ch211-37e10.2
chr6_+_28051978 0.01 ENSDART00000143218
si:ch73-194h10.2
si:ch73-194h10.2
chr16_-_29397395 0.01 ENSDART00000130757
tlr18
toll-like receptor 18
chr25_+_19149241 0.00 ENSDART00000184982
ENSDART00000067324
mfge8b
milk fat globule-EGF factor 8 protein b
chr14_+_30568961 0.00 ENSDART00000184303
mrpl11
mitochondrial ribosomal protein L11
chr19_-_10323845 0.00 ENSDART00000151259
ENSDART00000151821
u2af2b
U2 small nuclear RNA auxiliary factor 2b
chr16_+_20056030 0.00 ENSDART00000027020
ankrd28b
ankyrin repeat domain 28b
chr19_-_10971230 0.00 ENSDART00000166196
LO018584.1

Network of associatons between targets according to the STRING database.

First level regulatory network of vox

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.0 0.1 GO:1902626 mature ribosome assembly(GO:0042256) assembly of large subunit precursor of preribosome(GO:1902626)
0.0 0.1 GO:0034454 microtubule anchoring at centrosome(GO:0034454)
0.0 0.3 GO:0061718 glucose catabolic process(GO:0006007) NADH regeneration(GO:0006735) glycolytic process through fructose-6-phosphate(GO:0061615) glycolytic process through glucose-6-phosphate(GO:0061620) canonical glycolysis(GO:0061621) glucose catabolic process to pyruvate(GO:0061718)
0.0 0.4 GO:0009437 carnitine metabolic process(GO:0009437)
0.0 0.1 GO:0060063 Spemann organizer formation at the embryonic shield(GO:0060063)
0.0 1.0 GO:0003009 skeletal muscle contraction(GO:0003009)
0.0 0.1 GO:0035513 oxidative RNA demethylation(GO:0035513)
0.0 0.1 GO:0097065 anterior head development(GO:0097065)
0.0 0.1 GO:0097531 mast cell chemotaxis(GO:0002551) regulation of mast cell chemotaxis(GO:0060753) positive regulation of mast cell chemotaxis(GO:0060754) mast cell migration(GO:0097531)
0.0 0.4 GO:0055008 cardiac muscle tissue morphogenesis(GO:0055008)
0.0 0.1 GO:1904292 regulation of ERAD pathway(GO:1904292)
0.0 0.3 GO:0030032 lamellipodium assembly(GO:0030032)
0.0 0.0 GO:0060688 regulation of morphogenesis of a branching structure(GO:0060688) positive regulation of mesonephros development(GO:0061213) regulation of mesonephros development(GO:0061217) regulation of kidney development(GO:0090183) positive regulation of kidney development(GO:0090184) regulation of branching involved in ureteric bud morphogenesis(GO:0090189) positive regulation of branching involved in ureteric bud morphogenesis(GO:0090190)
0.0 0.1 GO:0010692 regulation of alkaline phosphatase activity(GO:0010692) negative regulation of alkaline phosphatase activity(GO:0010693)
0.0 0.3 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 0.0 GO:0043461 proton-transporting ATP synthase complex assembly(GO:0043461) proton-transporting ATP synthase complex biogenesis(GO:0070272)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0031258 lamellipodium membrane(GO:0031258)
0.0 0.3 GO:0005945 6-phosphofructokinase complex(GO:0005945)
0.0 1.0 GO:0005861 troponin complex(GO:0005861)
0.0 0.2 GO:0098835 presynaptic endocytic zone(GO:0098833) presynaptic endocytic zone membrane(GO:0098835) extrinsic component of presynaptic membrane(GO:0098888) extrinsic component of presynaptic endocytic zone(GO:0098894)
0.0 0.1 GO:0001669 acrosomal vesicle(GO:0001669)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0043891 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.1 0.4 GO:0016416 carnitine O-palmitoyltransferase activity(GO:0004095) O-palmitoyltransferase activity(GO:0016416)
0.1 0.2 GO:0003989 acetyl-CoA carboxylase activity(GO:0003989)
0.0 0.2 GO:0008502 melatonin receptor activity(GO:0008502)
0.0 0.1 GO:0008179 adenylate cyclase binding(GO:0008179)
0.0 0.3 GO:0003872 6-phosphofructokinase activity(GO:0003872) fructose-6-phosphate binding(GO:0070095)
0.0 0.1 GO:0035516 oxidative DNA demethylase activity(GO:0035516)
0.0 0.2 GO:0005545 1-phosphatidylinositol binding(GO:0005545)
0.0 0.1 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.0 0.1 GO:0016531 copper chaperone activity(GO:0016531)
0.0 0.0 GO:0003994 aconitate hydratase activity(GO:0003994)
0.0 0.1 GO:0005172 vascular endothelial growth factor receptor binding(GO:0005172)
0.0 0.1 GO:0060182 apelin receptor activity(GO:0060182)
0.0 0.3 GO:0043236 laminin binding(GO:0043236)
0.0 0.0 GO:0016530 metallochaperone activity(GO:0016530)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 PID TCR CALCIUM PATHWAY Calcium signaling in the CD4+ TCR pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.6 REACTOME ACTIVATED AMPK STIMULATES FATTY ACID OXIDATION IN MUSCLE Genes involved in Activated AMPK stimulates fatty-acid oxidation in muscle
0.0 0.5 REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS Genes involved in Cell-extracellular matrix interactions
0.0 0.3 REACTOME GLYCOLYSIS Genes involved in Glycolysis