Project

PRJNA375882: Comprehensive Mouse Transcriptomic BodyMap

Navigation
Downloads

Results for ACUGCAU

Z-value: 0.30

Motif logo

miRNA associated with seed ACUGCAU

NamemiRBASE accession
MIMAT0000679

Activity profile of ACUGCAU motif

Sorted Z-values of ACUGCAU motif

Network of associatons between targets according to the STRING database.

First level regulatory network of ACUGCAU

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image
Promoter Score Transcript Gene Gene Info
chrX_-_102230225 2.64 ENSMUST00000121720.2
nucleosome assembly protein 1-like 2
chr12_-_11486544 2.38 ENSMUST00000072299.7
visinin-like 1
chr8_+_55407872 1.81 ENSMUST00000033915.9
glycoprotein m6a
chr16_+_6166982 1.58 ENSMUST00000056416.9
RNA binding protein, fox-1 homolog (C. elegans) 1
chr18_+_61058684 1.39 ENSMUST00000102888.10
ENSMUST00000025519.11
calcium/calmodulin-dependent protein kinase II alpha
chr11_-_28534260 1.27 ENSMUST00000093253.10
ENSMUST00000109502.9
ENSMUST00000042534.15
coiled-coil domain containing 85A
chr8_+_114932312 1.23 ENSMUST00000049509.7
ENSMUST00000150963.2
vesicle amine transport protein 1 like
chr6_-_23839419 1.09 ENSMUST00000115358.9
ENSMUST00000163871.9
Ca2+-dependent activator protein for secretion 2
chr6_-_24956296 1.09 ENSMUST00000127247.4
transmembrane protein 229A
chr5_+_146321757 0.92 ENSMUST00000016143.9
WASP family, member 3
chr2_+_102488985 0.90 ENSMUST00000080210.10
solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr9_-_107109108 0.86 ENSMUST00000044532.11
dedicator of cyto-kinesis 3
chr19_-_21449916 0.85 ENSMUST00000087600.10
guanine deaminase
chrX_+_165021897 0.85 ENSMUST00000112235.8
glycoprotein m6b
chr7_+_113365235 0.83 ENSMUST00000046687.16
spondin 1, (f-spondin) extracellular matrix protein
chr10_+_82821304 0.82 ENSMUST00000040110.8
carbohydrate sulfotransferase 11
chr5_+_89034666 0.79 ENSMUST00000148750.8
solute carrier family 4 (anion exchanger), member 4
chr2_+_65451100 0.78 ENSMUST00000144254.6
ENSMUST00000028377.14
sodium channel, voltage-gated, type II, alpha
chr1_+_34840785 0.76 ENSMUST00000047664.16
ENSMUST00000211073.2
Rho guanine nucleotide exchange factor (GEF) 4
novel protein
chr12_+_40495951 0.72 ENSMUST00000037488.8
dedicator of cytokinesis 4
chr17_+_3376827 0.71 ENSMUST00000169838.9
T cell lymphoma invasion and metastasis 2
chr3_-_26187883 0.71 ENSMUST00000108308.10
ENSMUST00000075054.10
neuroligin 1
chr11_-_6425877 0.71 ENSMUST00000179343.3
purine rich element binding protein B
chr14_+_84680993 0.70 ENSMUST00000071370.7
protocadherin 17
chrX_-_161426624 0.64 ENSMUST00000112334.8
RALBP1 associated Eps domain containing protein 2
chr1_+_42734889 0.59 ENSMUST00000054883.4
POU domain, class 3, transcription factor 3
chr4_-_91260265 0.58 ENSMUST00000107110.8
ENSMUST00000008633.15
ENSMUST00000107118.8
ELAV like RNA binding protein 1
chr12_+_49429574 0.56 ENSMUST00000179669.3
forkhead box G1
chr10_-_63926044 0.55 ENSMUST00000105439.2
leucine rich repeat transmembrane neuronal 3
chr1_-_16589511 0.53 ENSMUST00000162751.8
ENSMUST00000027052.13
ENSMUST00000149320.9
staufen double-stranded RNA binding protein 2
chr6_+_103487973 0.52 ENSMUST00000066905.9
cell adhesion molecule L1-like
chrX_-_7242065 0.49 ENSMUST00000191497.2
ENSMUST00000115744.2
ubiquitin specific peptidase 27, X chromosome
chrX_+_55655111 0.48 ENSMUST00000144068.8
ENSMUST00000077741.12
ENSMUST00000114784.4
solute carrier family 9 (sodium/hydrogen exchanger), member 6
chr6_-_35516700 0.47 ENSMUST00000201026.2
ENSMUST00000031866.9
myotrophin
chr13_+_118851214 0.46 ENSMUST00000022246.9
fibroblast growth factor 10
chr9_-_91247809 0.45 ENSMUST00000034927.13
zinc finger protein of the cerebellum 1
chr14_-_80008745 0.44 ENSMUST00000039568.11
ENSMUST00000195355.2
protocadherin 8
chr11_+_62172283 0.43 ENSMUST00000101075.11
ENSMUST00000050646.13
tetratricopeptide repeat domain 19
chr4_+_57637817 0.42 ENSMUST00000150412.4
paralemmin A kinase anchor protein
chr5_+_13449276 0.39 ENSMUST00000030714.9
ENSMUST00000141968.2
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
chr6_-_92191878 0.37 ENSMUST00000014694.11
rabenosyn, RAB effector
chrX_-_135644424 0.37 ENSMUST00000166478.8
ENSMUST00000113097.8
mortality factor 4 like 2
chr4_-_3574844 0.36 ENSMUST00000029891.12
transmembrane protein 68
chr1_-_164285914 0.35 ENSMUST00000027863.13
ATPase, Na+/K+ transporting, beta 1 polypeptide
chr13_+_55840888 0.35 ENSMUST00000057844.10
RIKEN cDNA B230219D22 gene
chr12_-_78908409 0.34 ENSMUST00000021536.9
ATPase, H+ transporting, lysosomal V1 subunit D
chr2_+_12928852 0.33 ENSMUST00000154269.7
ENSMUST00000114796.9
ENSMUST00000134794.8
ENSMUST00000028063.7
phosphotriesterase related
chr14_-_55329734 0.32 ENSMUST00000036328.9
zinc finger homeobox 2
chr4_+_57845240 0.32 ENSMUST00000102903.8
ENSMUST00000107598.9
paralemmin A kinase anchor protein
chr11_-_50732373 0.31 ENSMUST00000109133.2
ENSMUST00000109134.8
ENSMUST00000049625.2
zinc finger protein 879
chr3_-_138780937 0.28 ENSMUST00000098574.9
RAP1, GTP-GDP dissociation stimulator 1
chr16_+_16714333 0.28 ENSMUST00000027373.12
ENSMUST00000232247.2
protein phosphatase 1F (PP2C domain containing)
chr8_-_105169621 0.27 ENSMUST00000041769.8
dynein, cytoplasmic 1 light intermediate chain 2
chr5_+_134128543 0.27 ENSMUST00000016088.9
cytosolic arginine sensor for mTORC1 subunit 2
chr2_+_181162278 0.27 ENSMUST00000072334.12
DnaJ heat shock protein family (Hsp40) member C5
chr10_-_121883196 0.26 ENSMUST00000020322.12
ENSMUST00000081688.13
SLIT-ROBO Rho GTPase activating protein 1
chr14_-_47059694 0.26 ENSMUST00000111817.8
ENSMUST00000079314.12
glia maturation factor, beta
chrX_+_111513971 0.25 ENSMUST00000071814.13
zinc finger protein 711
chr5_-_24235646 0.25 ENSMUST00000197617.5
ENSMUST00000030849.13
family with sequence similarity 126, member A
chr9_-_66702750 0.25 ENSMUST00000034934.15
aph1 homolog B, gamma secretase subunit
chr16_-_31821938 0.23 ENSMUST00000023457.13
ENSMUST00000231360.2
SUMO/sentrin specific peptidase 5
chr3_-_94490023 0.23 ENSMUST00000029783.16
sorting nexin family member 27
chr15_-_36794741 0.22 ENSMUST00000110361.8
ENSMUST00000022894.14
ENSMUST00000110359.2
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
chr1_-_16727067 0.22 ENSMUST00000188641.7
elongin C
chr9_-_71393175 0.21 ENSMUST00000233263.2
ENSMUST00000034720.12
polymerase (RNA) II (DNA directed) polypeptide M
chr17_-_45744637 0.20 ENSMUST00000024727.10
cell division cycle 5-like (S. pombe)
chr4_-_132570421 0.20 ENSMUST00000105919.2
ENSMUST00000030702.14
protein phosphatase 1, regulatory subunit 8
chr11_+_32592707 0.19 ENSMUST00000109366.8
ENSMUST00000093205.13
ENSMUST00000076383.8
F-box and WD-40 domain protein 11
chr12_+_21161722 0.18 ENSMUST00000064595.15
ENSMUST00000101562.11
ENSMUST00000090834.13
ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
chr1_-_119765343 0.16 ENSMUST00000064091.12
protein tyrosine phosphatase, non-receptor type 4
chr9_-_22300409 0.14 ENSMUST00000040912.9
anillin, actin binding protein
chr11_-_85125889 0.14 ENSMUST00000018625.10
amyloid beta precursor protein (cytoplasmic tail) binding protein 2
chr1_+_88998115 0.13 ENSMUST00000066279.11
SH3-domain binding protein 4
chr2_-_23462052 0.13 ENSMUST00000132484.7
speckle-type BTB/POZ protein-like
chr3_+_108444837 0.12 ENSMUST00000029485.6
RIKEN cDNA 1700013F07 gene
chr2_-_120439764 0.11 ENSMUST00000102496.8
leucine rich repeat containing 57
chr12_-_91815855 0.10 ENSMUST00000167466.2
ENSMUST00000021347.12
ENSMUST00000178462.8
sel-1 suppressor of lin-12-like (C. elegans)
chr2_+_119505543 0.10 ENSMUST00000028767.9
RTF1, Paf1/RNA polymerase II complex component
chr15_-_64184485 0.09 ENSMUST00000177083.8
ENSMUST00000177371.8
ArfGAP with SH3 domain, ankyrin repeat and PH domain1
chr14_+_101967343 0.09 ENSMUST00000100337.10
LIM domain only 7
chr16_+_14179421 0.08 ENSMUST00000100167.10
ENSMUST00000154748.8
ENSMUST00000134776.8
ATP-binding cassette, sub-family C (CFTR/MRP), member 1
chr6_-_99643723 0.08 ENSMUST00000032151.3
eukaryotic translation initiation factor 4E member 3
chr11_-_82781369 0.06 ENSMUST00000092844.13
ENSMUST00000021033.16
ENSMUST00000018985.15
RAD51 paralog D
chr1_+_187730018 0.05 ENSMUST00000027906.13
estrogen-related receptor gamma
chr14_+_31881822 0.05 ENSMUST00000163336.8
ENSMUST00000169722.8
ENSMUST00000168385.8
nuclear receptor coactivator 4
chr16_+_55895786 0.05 ENSMUST00000049128.11
ENSMUST00000089362.9
ENSMUST00000202799.4
ENSMUST00000201011.2
ENSMUST00000202000.2
SUMO1/sentrin specific peptidase 7
chr4_-_88357112 0.04 ENSMUST00000132493.8
ENSMUST00000030221.3
ENSMUST00000151280.8
3-hydroxyacyl-CoA dehydratase 4
chr1_-_128345089 0.04 ENSMUST00000027602.15
ENSMUST00000064309.9
aspartyl-tRNA synthetase
chr15_-_50753061 0.03 ENSMUST00000165201.9
ENSMUST00000184458.8
transcriptional repressor GATA binding 1
chrX_-_103024847 0.03 ENSMUST00000121153.8
ENSMUST00000070705.6
ring finger protein, LIM domain interacting
chr11_+_80099843 0.03 ENSMUST00000077451.14
ENSMUST00000055056.16
ras homolog family member T1
chr18_+_44513547 0.02 ENSMUST00000202306.2
ENSMUST00000025350.10
decapping mRNA 2
chr2_+_121786444 0.02 ENSMUST00000036647.13
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
chr1_+_82817170 0.02 ENSMUST00000189220.7
ENSMUST00000113444.8
ArfGAP with FG repeats 1
chr5_-_51711237 0.02 ENSMUST00000132734.8
peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
chr14_-_123220554 0.01 ENSMUST00000126867.8
ENSMUST00000148661.2
ENSMUST00000037726.14
transmembrane and tetratricopeptide repeat containing 4
chr19_+_3817396 0.01 ENSMUST00000052699.13
ENSMUST00000113974.11
ENSMUST00000113972.9
ENSMUST00000113973.8
ENSMUST00000113977.9
ENSMUST00000113968.9
lysine methyltransferase 5B
chr1_-_138547403 0.01 ENSMUST00000027642.5
ENSMUST00000186017.7
NIMA (never in mitosis gene a)-related expressed kinase 7

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.6 GO:0071442 positive regulation of histone H3-K14 acetylation(GO:0071442)
0.2 0.7 GO:0097115 cytoskeletal matrix organization at active zone(GO:0048789) neurexin clustering involved in presynaptic membrane assembly(GO:0097115) retrograde trans-synaptic signaling by trans-synaptic protein complex(GO:0098942)
0.2 0.9 GO:0046098 guanine metabolic process(GO:0046098)
0.2 0.6 GO:0021852 pyramidal neuron migration(GO:0021852)
0.2 0.5 GO:0060435 bronchiole development(GO:0060435) secretion by lung epithelial cell involved in lung growth(GO:0061033)
0.1 0.6 GO:0072023 ascending thin limb development(GO:0072021) thick ascending limb development(GO:0072023) metanephric ascending thin limb development(GO:0072218) metanephric thick ascending limb development(GO:0072233)
0.1 0.7 GO:1904694 negative regulation of vascular smooth muscle contraction(GO:1904694)
0.1 1.1 GO:1990504 dense core granule exocytosis(GO:1990504)
0.1 0.5 GO:0098961 dendritic transport of ribonucleoprotein complex(GO:0098961) dendritic transport of messenger ribonucleoprotein complex(GO:0098963) anterograde dendritic transport of messenger ribonucleoprotein complex(GO:0098964)
0.1 0.4 GO:1903045 neural crest cell migration involved in sympathetic nervous system development(GO:1903045)
0.1 0.9 GO:0070777 D-aspartate transport(GO:0070777) D-aspartate import(GO:0070779)
0.1 0.4 GO:1903281 positive regulation of calcium:sodium antiporter activity(GO:1903281)
0.1 0.8 GO:0051581 negative regulation of neurotransmitter uptake(GO:0051581) negative regulation of serotonin uptake(GO:0051612)
0.1 1.4 GO:0098970 receptor diffusion trapping(GO:0098953) postsynaptic neurotransmitter receptor diffusion trapping(GO:0098970) neurotransmitter receptor diffusion trapping(GO:0099628)
0.1 0.6 GO:0030206 chondroitin sulfate biosynthetic process(GO:0030206)
0.1 0.5 GO:2000812 regulation of barbed-end actin filament capping(GO:2000812)
0.0 0.1 GO:1904172 positive regulation of bleb assembly(GO:1904172)
0.0 0.4 GO:0008627 intrinsic apoptotic signaling pathway in response to osmotic stress(GO:0008627)
0.0 0.7 GO:2000807 regulation of synaptic vesicle clustering(GO:2000807)
0.0 0.5 GO:0098719 sodium ion import across plasma membrane(GO:0098719) sodium ion import into cell(GO:1990118)
0.0 2.4 GO:0035774 positive regulation of insulin secretion involved in cellular response to glucose stimulus(GO:0035774)
0.0 0.2 GO:0051643 endoplasmic reticulum localization(GO:0051643)
0.0 0.4 GO:0090160 Golgi to lysosome transport(GO:0090160)
0.0 0.2 GO:0090168 Golgi reassembly(GO:0090168)
0.0 0.4 GO:0034551 respiratory chain complex III assembly(GO:0017062) mitochondrial respiratory chain complex III assembly(GO:0034551)
0.0 1.6 GO:2001014 regulation of skeletal muscle cell differentiation(GO:2001014)
0.0 0.8 GO:0015701 bicarbonate transport(GO:0015701)
0.0 1.8 GO:0051491 positive regulation of filopodium assembly(GO:0051491)
0.0 0.3 GO:0034316 negative regulation of Arp2/3 complex-mediated actin nucleation(GO:0034316)
0.0 0.9 GO:0031643 positive regulation of myelination(GO:0031643)
0.0 0.1 GO:0042939 glutathione transport(GO:0034635) oligopeptide transmembrane transport(GO:0035672) tripeptide transport(GO:0042939)
0.0 0.3 GO:0051561 positive regulation of mitochondrial calcium ion concentration(GO:0051561)
0.0 0.3 GO:0016576 histone dephosphorylation(GO:0016576)
0.0 0.3 GO:1902004 positive regulation of beta-amyloid formation(GO:1902004)
0.0 0.2 GO:0016926 protein desumoylation(GO:0016926)
0.0 0.1 GO:1903527 positive regulation of membrane tubulation(GO:1903527)
0.0 0.4 GO:0043968 histone H2A acetylation(GO:0043968)
0.0 0.8 GO:0046847 filopodium assembly(GO:0046847)
0.0 0.5 GO:0071108 protein K48-linked deubiquitination(GO:0071108)
0.0 0.2 GO:0007220 Notch receptor processing(GO:0007220)
0.0 0.5 GO:0035640 exploration behavior(GO:0035640)
0.0 0.5 GO:1990090 response to nerve growth factor(GO:1990089) cellular response to nerve growth factor stimulus(GO:1990090)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.4 GO:0099573 glutamatergic postsynaptic density(GO:0099573)
0.1 0.5 GO:0044308 axonal spine(GO:0044308)
0.1 0.9 GO:0005662 DNA replication factor A complex(GO:0005662)
0.0 0.4 GO:0010009 cytoplasmic side of endosome membrane(GO:0010009)
0.0 0.2 GO:0070449 elongin complex(GO:0070449)
0.0 0.4 GO:0005890 sodium:potassium-exchanging ATPase complex(GO:0005890)
0.0 0.8 GO:0001518 voltage-gated sodium channel complex(GO:0001518)
0.0 0.5 GO:0008290 F-actin capping protein complex(GO:0008290)
0.0 0.7 GO:0017146 NMDA selective glutamate receptor complex(GO:0017146)
0.0 1.8 GO:0044295 axonal growth cone(GO:0044295)
0.0 0.5 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.0 0.2 GO:0071203 WASH complex(GO:0071203)
0.0 0.1 GO:0000839 Hrd1p ubiquitin ligase ERAD-L complex(GO:0000839)
0.0 0.2 GO:0070765 gamma-secretase complex(GO:0070765)
0.0 0.1 GO:0005826 actomyosin contractile ring(GO:0005826)
0.0 0.9 GO:0030673 axolemma(GO:0030673)
0.0 0.4 GO:1902562 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:0047756 chondroitin 4-sulfotransferase activity(GO:0047756)
0.2 0.7 GO:0032422 purine-rich negative regulatory element binding(GO:0032422)
0.2 0.9 GO:0015501 glutamate:sodium symporter activity(GO:0015501)
0.1 1.4 GO:0009931 calcium-dependent protein serine/threonine kinase activity(GO:0009931)
0.1 0.5 GO:0005111 type 2 fibroblast growth factor receptor binding(GO:0005111)
0.1 0.5 GO:0061578 Lys63-specific deubiquitinase activity(GO:0061578)
0.1 1.0 GO:0043522 leucine zipper domain binding(GO:0043522)
0.1 0.2 GO:0070139 ubiquitin-like protein-specific endopeptidase activity(GO:0070137) SUMO-specific endopeptidase activity(GO:0070139)
0.0 0.5 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.0 0.3 GO:0033192 calmodulin-dependent protein phosphatase activity(GO:0033192)
0.0 0.8 GO:0008510 sodium:bicarbonate symporter activity(GO:0008510)
0.0 0.7 GO:0042043 neurexin family protein binding(GO:0042043)
0.0 0.4 GO:0005391 sodium:potassium-exchanging ATPase activity(GO:0005391)
0.0 0.3 GO:0045504 dynein heavy chain binding(GO:0045504)
0.0 0.1 GO:0035673 oligopeptide transmembrane transporter activity(GO:0035673)
0.0 0.4 GO:0038191 neuropilin binding(GO:0038191)
0.0 0.8 GO:0030676 Rac guanyl-nucleotide exchange factor activity(GO:0030676)
0.0 0.2 GO:0004726 non-membrane spanning protein tyrosine phosphatase activity(GO:0004726)
0.0 0.3 GO:0071933 Arp2/3 complex binding(GO:0071933)
0.0 0.1 GO:1990269 RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.0 0.9 GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines(GO:0016814)
0.0 0.3 GO:0043008 ATP-dependent protein binding(GO:0043008)
0.0 1.8 GO:0005262 calcium channel activity(GO:0005262)
0.0 0.9 GO:0048365 Rac GTPase binding(GO:0048365)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.4 ST WNT CA2 CYCLIC GMP PATHWAY Wnt/Ca2+/cyclic GMP signaling.
0.0 0.2 PID SYNDECAN 3 PATHWAY Syndecan-3-mediated signaling events
0.0 1.0 PID RAC1 REG PATHWAY Regulation of RAC1 activity

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.9 REACTOME PURINE CATABOLISM Genes involved in Purine catabolism
0.0 1.4 REACTOME CREB PHOSPHORYLATION THROUGH THE ACTIVATION OF CAMKII Genes involved in CREB phosphorylation through the activation of CaMKII
0.0 0.6 REACTOME CHONDROITIN SULFATE BIOSYNTHESIS Genes involved in Chondroitin sulfate biosynthesis
0.0 0.4 REACTOME SEMA3A PLEXIN REPULSION SIGNALING BY INHIBITING INTEGRIN ADHESION Genes involved in SEMA3A-Plexin repulsion signaling by inhibiting Integrin adhesion
0.0 0.5 REACTOME FGFR1 LIGAND BINDING AND ACTIVATION Genes involved in FGFR1 ligand binding and activation
0.0 1.5 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.0 0.8 REACTOME INTERACTION BETWEEN L1 AND ANKYRINS Genes involved in Interaction between L1 and Ankyrins
0.0 0.4 REACTOME BASIGIN INTERACTIONS Genes involved in Basigin interactions
0.0 0.2 REACTOME REGULATED PROTEOLYSIS OF P75NTR Genes involved in Regulated proteolysis of p75NTR
0.0 2.1 REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides
0.0 0.3 REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION Genes involved in GABA synthesis, release, reuptake and degradation
0.0 0.2 REACTOME DESTABILIZATION OF MRNA BY KSRP Genes involved in Destabilization of mRNA by KSRP