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PRJNA375882: Comprehensive Mouse Transcriptomic BodyMap

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Results for GAUAUGU

Z-value: 0.18

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miRNA associated with seed GAUAUGU

NamemiRBASE accession
mmu-miR-190a-5p
MIMAT0000220
mmu-miR-190b-5p
MIMAT0004852

Activity profile of GAUAUGU motif

Sorted Z-values of GAUAUGU motif

Network of associatons between targets according to the STRING database.

First level regulatory network of GAUAUGU

PNG image of the network

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Top targets:

Promoter Score Transcript Gene Gene Info
chr14_-_124914516 0.57 ENSMUST00000095529.10
Fgf14
fibroblast growth factor 14
chr13_+_117738972 0.47 ENSMUST00000006991.9
Hcn1
hyperpolarization activated cyclic nucleotide gated potassium channel 1
chr18_-_25886750 0.46 ENSMUST00000224553.2
ENSMUST00000025117.14
Celf4
CUGBP, Elav-like family member 4
chr7_+_51271742 0.42 ENSMUST00000032710.7
Slc17a6
solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
chr1_-_22031718 0.41 ENSMUST00000029667.13
ENSMUST00000173058.8
ENSMUST00000173404.2
Kcnq5
potassium voltage-gated channel, subfamily Q, member 5
chr3_-_26187883 0.38 ENSMUST00000108308.10
ENSMUST00000075054.10
Nlgn1
neuroligin 1
chr6_-_149003171 0.35 ENSMUST00000111557.8
Dennd5b
DENN/MADD domain containing 5B
chr1_-_25267894 0.33 ENSMUST00000126626.8
Adgrb3
adhesion G protein-coupled receptor B3
chr2_-_167032068 0.33 ENSMUST00000059826.10
Kcnb1
potassium voltage gated channel, Shab-related subfamily, member 1
chr1_+_106099482 0.31 ENSMUST00000061047.7
Phlpp1
PH domain and leucine rich repeat protein phosphatase 1
chr2_+_105499233 0.27 ENSMUST00000111086.11
ENSMUST00000111087.10
Pax6
paired box 6
chr2_-_79287095 0.20 ENSMUST00000041099.5
Neurod1
neurogenic differentiation 1
chrX_+_81992467 0.19 ENSMUST00000114000.8
Dmd
dystrophin, muscular dystrophy
chr12_+_78273356 0.19 ENSMUST00000110388.10
Gphn
gephyrin
chr11_+_117545618 0.17 ENSMUST00000106344.8
Tnrc6c
trinucleotide repeat containing 6C
chr6_+_14901343 0.13 ENSMUST00000115477.8
Foxp2
forkhead box P2
chr17_-_56769193 0.11 ENSMUST00000086828.10
Ptprs
protein tyrosine phosphatase, receptor type, S
chr2_+_115412148 0.10 ENSMUST00000166472.8
ENSMUST00000110918.3
Cdin1
CDAN1 interacting nuclease 1
chr6_+_114620054 0.09 ENSMUST00000032457.17
Atg7
autophagy related 7
chr6_-_119394634 0.06 ENSMUST00000032272.13
Adipor2
adiponectin receptor 2
chr4_+_129083553 0.06 ENSMUST00000106054.4
Yars
tyrosyl-tRNA synthetase
chr18_-_46331877 0.04 ENSMUST00000167364.9
Trim36
tripartite motif-containing 36
chr5_-_76452365 0.04 ENSMUST00000075159.5
Clock
circadian locomotor output cycles kaput
chr5_+_122422428 0.03 ENSMUST00000053426.15
Pptc7
PTC7 protein phosphatase homolog
chr2_+_129642371 0.03 ENSMUST00000165413.9
ENSMUST00000166282.3
Stk35
serine/threonine kinase 35
chrX_-_140508177 0.03 ENSMUST00000067841.8
Irs4
insulin receptor substrate 4
chr4_+_8691303 0.03 ENSMUST00000051558.10
Chd7
chromodomain helicase DNA binding protein 7
chr3_+_60910207 0.02 ENSMUST00000029331.7
ENSMUST00000193201.2
ENSMUST00000193943.2
P2ry1
purinergic receptor P2Y, G-protein coupled 1
chr9_+_74978429 0.02 ENSMUST00000123128.8
Myo5a
myosin VA
chr10_-_115087309 0.02 ENSMUST00000020339.10
Tbc1d15
TBC1 domain family, member 15
chr14_+_47120311 0.01 ENSMUST00000022386.15
ENSMUST00000228404.2
ENSMUST00000100672.11
Samd4
sterile alpha motif domain containing 4
chr19_+_29499671 0.01 ENSMUST00000043610.13
Ric1
RAB6A GEF complex partner 1

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 GO:1902630 regulation of membrane hyperpolarization(GO:1902630)
0.1 0.4 GO:0097115 cytoskeletal matrix organization at active zone(GO:0048789) neurexin clustering involved in presynaptic membrane assembly(GO:0097115) retrograde trans-synaptic signaling by trans-synaptic protein complex(GO:0098942)
0.1 0.6 GO:1901843 positive regulation of high voltage-gated calcium channel activity(GO:1901843)
0.1 0.3 GO:0021905 pancreatic A cell development(GO:0003322) forebrain-midbrain boundary formation(GO:0021905) somatic motor neuron fate commitment(GO:0021917) regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment(GO:0021918) sensory neuron migration(GO:1904937)
0.1 0.3 GO:0099558 maintenance of synapse structure(GO:0099558)
0.1 0.2 GO:0021627 olfactory nerve morphogenesis(GO:0021627) olfactory nerve structural organization(GO:0021629)
0.0 0.2 GO:0007529 establishment of synaptic specificity at neuromuscular junction(GO:0007529)
0.0 0.4 GO:0098700 neurotransmitter loading into synaptic vesicle(GO:0098700)
0.0 0.3 GO:0010701 positive regulation of norepinephrine secretion(GO:0010701)
0.0 0.2 GO:0060729 intestinal epithelial structure maintenance(GO:0060729)
0.0 0.3 GO:0090038 negative regulation of protein kinase C signaling(GO:0090038)
0.0 0.5 GO:1902866 regulation of retina development in camera-type eye(GO:1902866)
0.0 0.1 GO:0039521 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) suppression by virus of host autophagy(GO:0039521) amino acid homeostasis(GO:0080144) negative regulation of sphingolipid biosynthesis involved in cellular sphingolipid homeostasis(GO:0090157)
0.0 0.1 GO:0034164 negative regulation of toll-like receptor 9 signaling pathway(GO:0034164)
0.0 0.0 GO:0021553 olfactory nerve development(GO:0021553)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 GO:0098855 HCN channel complex(GO:0098855)
0.0 0.4 GO:0017146 NMDA selective glutamate receptor complex(GO:0017146)
0.0 0.5 GO:0098563 integral component of synaptic vesicle membrane(GO:0030285) intrinsic component of synaptic vesicle membrane(GO:0098563)
0.0 0.3 GO:0043083 synaptic cleft(GO:0043083)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0005222 intracellular cAMP activated cation channel activity(GO:0005222)
0.0 0.2 GO:0043546 molybdopterin cofactor binding(GO:0043546)
0.0 0.1 GO:0019778 Atg12 activating enzyme activity(GO:0019778) Atg8 activating enzyme activity(GO:0019779)
0.0 0.4 GO:0005313 L-glutamate transmembrane transporter activity(GO:0005313)
0.0 0.4 GO:0042043 neurexin family protein binding(GO:0042043)
0.0 0.3 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.0 0.6 GO:0005104 fibroblast growth factor receptor binding(GO:0005104)
0.0 0.1 GO:0097003 adipokinetic hormone receptor activity(GO:0097003)
0.0 0.1 GO:0035374 chondroitin sulfate binding(GO:0035374)
0.0 0.3 GO:0003680 AT DNA binding(GO:0003680) co-SMAD binding(GO:0070410)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 REACTOME NEGATIVE REGULATION OF THE PI3K AKT NETWORK Genes involved in Negative regulation of the PI3K/AKT network
0.0 0.5 REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS Genes involved in Regulation of gene expression in beta cells
0.0 0.7 REACTOME VOLTAGE GATED POTASSIUM CHANNELS Genes involved in Voltage gated Potassium channels