PRJNA375882: Comprehensive Mouse Transcriptomic BodyMap
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Zfp281 | mm39_v1_chr1_+_136552639_136552688 | 0.60 | 2.9e-08 | Click! |
Maz | mm39_v1_chr7_-_126625739_126625780 | 0.58 | 8.9e-08 | Click! |
Promoter | Score | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr10_+_126914755 Show fit | 14.23 |
ENSMUST00000039259.7
ENSMUST00000217941.2 |
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 |
|
chr11_+_69909245 Show fit | 13.74 |
ENSMUST00000231415.2
ENSMUST00000108588.9 |
discs large MAGUK scaffold protein 4 |
|
chr15_-_89033761 Show fit | 13.53 |
ENSMUST00000088823.5
|
mitogen-activated protein kinase 11 |
|
chrX_-_134111421 Show fit | 13.12 |
ENSMUST00000033783.2
|
transcription elongation factor A (SII)-like 6 |
|
chr9_+_43954681 Show fit | 11.91 |
ENSMUST00000114840.2
|
thymus cell antigen 1, theta |
|
chr7_-_105230395 Show fit | 11.61 |
ENSMUST00000188726.2
ENSMUST00000188440.7 |
amyloid beta (A4) precursor protein-binding, family B, member 1 |
|
chr2_-_180798785 Show fit | 11.34 |
ENSMUST00000055990.8
|
eukaryotic translation elongation factor 1 alpha 2 |
|
chr7_-_105230479 Show fit | 10.85 |
ENSMUST00000191601.7
|
amyloid beta (A4) precursor protein-binding, family B, member 1 |
|
chrX_+_135567124 Show fit | 10.21 |
ENSMUST00000060904.11
ENSMUST00000113100.2 ENSMUST00000128040.2 |
transcription elongation factor A (SII)-like 3 |
|
chr8_+_96404713 Show fit | 9.88 |
ENSMUST00000041318.14
|
N-myc downstream regulated gene 4 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 87.3 | GO:0051965 | positive regulation of synapse assembly(GO:0051965) |
0.9 | 43.8 | GO:0050771 | negative regulation of axonogenesis(GO:0050771) |
2.8 | 39.7 | GO:0098953 | receptor diffusion trapping(GO:0098953) postsynaptic neurotransmitter receptor diffusion trapping(GO:0098970) neurotransmitter receptor diffusion trapping(GO:0099628) |
6.4 | 38.2 | GO:0050757 | thymidylate synthase biosynthetic process(GO:0050757) regulation of thymidylate synthase biosynthetic process(GO:0050758) negative regulation of thymidylate synthase biosynthetic process(GO:0050760) |
1.1 | 36.0 | GO:0021952 | central nervous system projection neuron axonogenesis(GO:0021952) |
1.6 | 34.3 | GO:0048172 | regulation of short-term neuronal synaptic plasticity(GO:0048172) |
0.6 | 34.0 | GO:0007019 | microtubule depolymerization(GO:0007019) |
0.6 | 32.5 | GO:0045761 | regulation of adenylate cyclase activity(GO:0045761) |
0.9 | 31.2 | GO:0035640 | exploration behavior(GO:0035640) |
0.8 | 30.5 | GO:1901385 | regulation of voltage-gated calcium channel activity(GO:1901385) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 142.7 | GO:0014069 | postsynaptic density(GO:0014069) |
0.3 | 134.4 | GO:0005578 | proteinaceous extracellular matrix(GO:0005578) |
0.8 | 85.8 | GO:0008076 | voltage-gated potassium channel complex(GO:0008076) |
1.8 | 83.8 | GO:0032590 | dendrite membrane(GO:0032590) |
0.7 | 67.4 | GO:0016528 | sarcoplasm(GO:0016528) |
0.8 | 65.8 | GO:0043198 | dendritic shaft(GO:0043198) |
3.0 | 62.6 | GO:0044300 | cerebellar mossy fiber(GO:0044300) |
0.5 | 60.1 | GO:0008021 | synaptic vesicle(GO:0008021) |
1.5 | 51.1 | GO:0032281 | AMPA glutamate receptor complex(GO:0032281) |
4.2 | 46.7 | GO:1990761 | growth cone lamellipodium(GO:1990761) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 135.5 | GO:0015631 | tubulin binding(GO:0015631) |
0.4 | 54.0 | GO:0044325 | ion channel binding(GO:0044325) |
0.5 | 53.0 | GO:0005518 | collagen binding(GO:0005518) |
0.4 | 46.0 | GO:0005089 | Rho guanyl-nucleotide exchange factor activity(GO:0005089) |
1.3 | 43.4 | GO:0048156 | tau protein binding(GO:0048156) |
0.5 | 41.0 | GO:0015459 | potassium channel regulator activity(GO:0015459) |
0.2 | 40.4 | GO:0017124 | SH3 domain binding(GO:0017124) |
0.8 | 39.2 | GO:0004683 | calmodulin-dependent protein kinase activity(GO:0004683) |
0.7 | 38.9 | GO:0050699 | WW domain binding(GO:0050699) |
0.1 | 38.6 | GO:0005096 | GTPase activator activity(GO:0005096) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 94.1 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.7 | 48.5 | PID REELIN PATHWAY | Reelin signaling pathway |
0.6 | 39.7 | PID INTEGRIN1 PATHWAY | Beta1 integrin cell surface interactions |
0.9 | 36.9 | ST GA12 PATHWAY | G alpha 12 Pathway |
0.7 | 36.9 | PID RAS PATHWAY | Regulation of Ras family activation |
0.5 | 36.3 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.7 | 29.9 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.6 | 28.0 | PID PI3K PLC TRK PATHWAY | Trk receptor signaling mediated by PI3K and PLC-gamma |
0.6 | 26.2 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.2 | 23.7 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.1 | 68.7 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
1.1 | 58.0 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.9 | 56.8 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.9 | 51.2 | REACTOME VOLTAGE GATED POTASSIUM CHANNELS | Genes involved in Voltage gated Potassium channels |
0.9 | 45.6 | REACTOME SIGNALING BY ROBO RECEPTOR | Genes involved in Signaling by Robo receptor |
0.8 | 43.9 | REACTOME PLC BETA MEDIATED EVENTS | Genes involved in PLC beta mediated events |
1.8 | 43.6 | REACTOME GABA A RECEPTOR ACTIVATION | Genes involved in GABA A receptor activation |
1.7 | 41.7 | REACTOME TRAFFICKING OF GLUR2 CONTAINING AMPA RECEPTORS | Genes involved in Trafficking of GluR2-containing AMPA receptors |
0.5 | 40.4 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |
0.8 | 37.6 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |