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PRJNA375882: Comprehensive Mouse Transcriptomic BodyMap

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Results for Pax1_Pax9

Z-value: 0.52

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Transcription factors associated with Pax1_Pax9

Gene Symbol Gene ID Gene Info
Pax1
ENSMUSG00000037034.17 Pax1
Pax9
ENSMUSG00000001497.19 Pax9

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Pax1mm39_v1_chr2_+_147206910_1472069310.103.9e-01Click!
Pax9mm39_v1_chr12_+_56742413_56742459-0.075.8e-01Click!

Activity profile of Pax1_Pax9 motif

Sorted Z-values of Pax1_Pax9 motif

Network of associatons between targets according to the STRING database.

First level regulatory network of Pax1_Pax9

PNG image of the network

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Top targets:

Promoter Score Transcript Gene Gene Info
chr2_+_177834868 6.91 ENSMUST00000103065.2
Phactr3
phosphatase and actin regulator 3
chr6_-_144994534 6.54 ENSMUST00000032402.12
Bcat1
branched chain aminotransferase 1, cytosolic
chr5_+_112403678 5.78 ENSMUST00000031286.13
ENSMUST00000131673.8
ENSMUST00000112375.2
Crybb1
crystallin, beta B1
chr6_-_144994327 5.59 ENSMUST00000204138.3
Bcat1
branched chain aminotransferase 1, cytosolic
chr15_-_83989801 5.26 ENSMUST00000229826.2
ENSMUST00000082365.6
Sult4a1
sulfotransferase family 4A, member 1
chr18_+_69477541 2.19 ENSMUST00000114985.10
ENSMUST00000128706.8
ENSMUST00000201781.4
ENSMUST00000202674.4
Tcf4
transcription factor 4
chr9_-_22300409 1.72 ENSMUST00000040912.9
Anln
anillin, actin binding protein
chr2_+_84564394 1.51 ENSMUST00000238573.2
ENSMUST00000090729.9
Ypel4
yippee like 4
chr5_-_129864202 1.51 ENSMUST00000136507.4
Psph
phosphoserine phosphatase
chr9_-_121668527 1.43 ENSMUST00000135986.9
Ccdc13
coiled-coil domain containing 13
chr17_-_24424456 1.40 ENSMUST00000201583.2
ENSMUST00000202925.4
ENSMUST00000167791.9
ENSMUST00000201960.4
ENSMUST00000040474.11
ENSMUST00000201089.4
ENSMUST00000201301.4
ENSMUST00000201805.4
ENSMUST00000168410.9
ENSMUST00000097376.10
Tbc1d24
TBC1 domain family, member 24
chr9_+_65268304 1.38 ENSMUST00000147185.3
Ubap1l
ubiquitin-associated protein 1-like
chr4_-_117232650 1.37 ENSMUST00000094853.9
Rnf220
ring finger protein 220
chr6_+_47021979 1.20 ENSMUST00000150737.2
Cntnap2
contactin associated protein-like 2
chr4_-_143026068 1.09 ENSMUST00000030317.14
Pdpn
podoplanin
chr9_-_96993169 1.01 ENSMUST00000085206.11
Slc25a36
solute carrier family 25, member 36
chr10_+_77814358 1.00 ENSMUST00000105397.10
ENSMUST00000105398.2
Cfap410
cilia and flagella associated protein 410
chr18_-_10706701 0.87 ENSMUST00000002549.9
ENSMUST00000117726.9
ENSMUST00000117828.9
Abhd3
abhydrolase domain containing 3
chr5_-_31448370 0.85 ENSMUST00000041565.11
ENSMUST00000201809.2
Ift172
intraflagellar transport 172
chr5_+_129864044 0.77 ENSMUST00000201414.5
Cct6a
chaperonin containing Tcp1, subunit 6a (zeta)
chr2_-_35995283 0.77 ENSMUST00000112960.8
ENSMUST00000112967.12
ENSMUST00000112963.8
Lhx6
LIM homeobox protein 6
chr7_-_23998735 0.76 ENSMUST00000145131.8
Zfp61
zinc finger protein 61
chr4_-_143026033 0.73 ENSMUST00000119654.2
Pdpn
podoplanin
chr14_+_32938774 0.68 ENSMUST00000111956.9
Arhgap22
Rho GTPase activating protein 22
chr8_+_31640332 0.65 ENSMUST00000209851.2
ENSMUST00000098842.3
ENSMUST00000210129.2
Tti2
TELO2 interacting protein 2
chr17_-_28128180 0.58 ENSMUST00000114848.8
Taf11
TATA-box binding protein associated factor 11
chr13_-_62924903 0.42 ENSMUST00000167516.3
Gm5141
predicted gene 5141
chr16_+_87350202 0.39 ENSMUST00000026700.8
Map3k7cl
Map3k7 C-terminal like
chr8_+_71176713 0.24 ENSMUST00000034307.14
ENSMUST00000239435.2
ENSMUST00000239487.2
ENSMUST00000110095.3
Pde4c
phosphodiesterase 4C, cAMP specific
chr1_+_87683592 0.19 ENSMUST00000144047.8
ENSMUST00000027512.13
ENSMUST00000113186.8
ENSMUST00000113190.3
Atg16l1
autophagy related 16-like 1 (S. cerevisiae)
chr18_-_78640066 0.19 ENSMUST00000235389.2
ENSMUST00000237674.2
Slc14a2
solute carrier family 14 (urea transporter), member 2
chr8_-_95564881 0.16 ENSMUST00000034233.15
ENSMUST00000162538.9
Ciapin1
cytokine induced apoptosis inhibitor 1
chrX_+_85235370 0.12 ENSMUST00000026036.5
Nr0b1
nuclear receptor subfamily 0, group B, member 1
chr11_+_83644514 0.01 ENSMUST00000001002.8
Heatr6
HEAT repeat containing 6
chr13_-_62668265 0.00 ENSMUST00000082203.7
Zfp934
zinc finger protein 934

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.5 12.1 GO:0009098 branched-chain amino acid biosynthetic process(GO:0009082) leucine biosynthetic process(GO:0009098) valine biosynthetic process(GO:0009099)
0.6 1.8 GO:1990764 regulation of myofibroblast contraction(GO:1904328) myofibroblast contraction(GO:1990764)
0.6 1.7 GO:1904172 positive regulation of bleb assembly(GO:1904172)
0.2 1.0 GO:0072531 pyrimidine-containing compound transmembrane transport(GO:0072531)
0.2 1.5 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.2 1.2 GO:0045163 clustering of voltage-gated potassium channels(GO:0045163)
0.1 0.8 GO:0021853 cerebral cortex GABAergic interneuron migration(GO:0021853) interneuron migration(GO:1904936)
0.1 2.2 GO:0042118 endothelial cell activation(GO:0042118)
0.1 1.4 GO:1902083 negative regulation of peptidyl-cysteine S-nitrosylation(GO:1902083)
0.1 1.4 GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043162)
0.1 0.8 GO:1904871 protein localization to nuclear body(GO:1903405) protein localization to Cajal body(GO:1904867) regulation of protein localization to Cajal body(GO:1904869) positive regulation of protein localization to Cajal body(GO:1904871)
0.0 0.2 GO:0061739 protein lipidation involved in autophagosome assembly(GO:0061739)
0.0 0.8 GO:0061525 hindgut development(GO:0061525) left/right axis specification(GO:0070986)
0.0 0.2 GO:0071918 urea transmembrane transport(GO:0071918)
0.0 5.8 GO:0007601 visual perception(GO:0007601)
0.0 0.6 GO:0043923 positive regulation by host of viral transcription(GO:0043923)
0.0 1.4 GO:0031122 cytoplasmic microtubule organization(GO:0031122)
0.0 0.9 GO:0046470 phosphatidylcholine metabolic process(GO:0046470)
0.0 1.4 GO:0051865 protein autoubiquitination(GO:0051865)
0.0 0.1 GO:0035902 response to immobilization stress(GO:0035902)
0.0 5.4 GO:0006790 sulfur compound metabolic process(GO:0006790)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.7 GO:0005826 actomyosin contractile ring(GO:0005826)
0.2 0.8 GO:0097598 sperm cytoplasmic droplet(GO:0097598)
0.2 1.8 GO:0097197 tetraspanin-enriched microdomain(GO:0097197)
0.1 1.4 GO:0000813 ESCRT I complex(GO:0000813)
0.0 0.8 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.0 1.4 GO:0034451 centriolar satellite(GO:0034451)
0.0 1.2 GO:0044224 juxtaparanode region of axon(GO:0044224)
0.0 0.6 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 2.2 GO:0032993 protein-DNA complex(GO:0032993)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.5 12.1 GO:0052656 branched-chain-amino-acid transaminase activity(GO:0004084) L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.3 1.5 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.2 0.8 GO:0071987 WD40-repeat domain binding(GO:0071987)
0.2 5.8 GO:0005212 structural constituent of eye lens(GO:0005212)
0.2 6.9 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.1 0.9 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.1 2.2 GO:0001011 transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087)
0.1 1.8 GO:0015250 water channel activity(GO:0015250)
0.1 5.3 GO:0008146 sulfotransferase activity(GO:0008146)
0.0 0.6 GO:0042809 vitamin D receptor binding(GO:0042809)
0.0 1.0 GO:0015215 nucleotide transmembrane transporter activity(GO:0015215)
0.0 0.2 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.0 0.4 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 12.1 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.0 2.2 PID AR PATHWAY Coregulation of Androgen receptor activity
0.0 0.8 PID HEDGEHOG GLI PATHWAY Hedgehog signaling events mediated by Gli proteins

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 12.1 REACTOME BRANCHED CHAIN AMINO ACID CATABOLISM Genes involved in Branched-chain amino acid catabolism
0.4 5.3 REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES Genes involved in Cytosolic sulfonation of small molecules
0.1 1.5 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.0 2.2 REACTOME MYOGENESIS Genes involved in Myogenesis
0.0 0.8 REACTOME FORMATION OF TUBULIN FOLDING INTERMEDIATES BY CCT TRIC Genes involved in Formation of tubulin folding intermediates by CCT/TriC
0.0 0.6 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening