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PRJNA375882: Comprehensive Mouse Transcriptomic BodyMap

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Results for Rara

Z-value: 0.64

Motif logo

Transcription factors associated with Rara

Gene Symbol Gene ID Gene Info
ENSMUSG00000037992.17 Rara

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Raramm39_v1_chr11_+_98818640_988186500.291.3e-02Click!

Activity profile of Rara motif

Sorted Z-values of Rara motif

Network of associatons between targets according to the STRING database.

First level regulatory network of Rara

PNG image of the network

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Promoter Score Transcript Gene Gene Info
chr7_+_16716989 5.22 ENSMUST00000206129.3
predicted gene, 42372
chr18_-_39652468 4.07 ENSMUST00000237944.2
nuclear receptor subfamily 3, group C, member 1
chr9_-_83028523 3.50 ENSMUST00000187193.7
ENSMUST00000185315.7
high mobility group nucleosomal binding domain 3
chr9_-_83028654 3.39 ENSMUST00000161796.9
ENSMUST00000162246.9
high mobility group nucleosomal binding domain 3
chr1_-_172034354 2.88 ENSMUST00000013842.12
ENSMUST00000111247.8
phosphoprotein enriched in astrocytes 15A
chr1_-_172034251 2.75 ENSMUST00000155109.2
phosphoprotein enriched in astrocytes 15A
chr6_+_67873135 2.74 ENSMUST00000103310.3
immunoglobulin kappa variable 14-126
chr7_+_4925781 2.70 ENSMUST00000207527.2
ENSMUST00000207687.2
ENSMUST00000208754.2
N-acetyltransferase 14
chr11_+_4936824 2.69 ENSMUST00000109897.8
ENSMUST00000009234.16
adaptor protein complex AP-1, beta 1 subunit
chr16_-_19079594 2.68 ENSMUST00000103752.3
ENSMUST00000197518.2
immunoglobulin lambda variable 2
chr8_+_69661683 2.68 ENSMUST00000212681.2
ENSMUST00000212312.2
zinc finger protein 930
chr17_+_34812361 2.50 ENSMUST00000174532.2
pre B cell leukemia homeobox 2
chr17_-_27816151 2.48 ENSMUST00000231742.2
nudix (nucleotide diphosphate linked moiety X)-type motif 3
chrX_-_104919201 2.48 ENSMUST00000198209.2
ATRX, chromatin remodeler
chr4_-_123458465 2.25 ENSMUST00000238731.2
microtubule-actin crosslinking factor 1
chr7_-_141009264 2.22 ENSMUST00000164387.2
ENSMUST00000137488.2
ENSMUST00000084436.10
cell cycle exit and neuronal differentiation 1
chr17_-_56440817 2.21 ENSMUST00000167545.3
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B
chr6_+_41107047 2.20 ENSMUST00000103271.2
T cell receptor beta, variable 13-3
chr7_-_141009346 2.18 ENSMUST00000124444.2
cell cycle exit and neuronal differentiation 1
chr6_+_68233361 2.16 ENSMUST00000103320.3
immunoglobulin kappa variable 14-111
chr12_-_115157739 2.14 ENSMUST00000103525.3
immunoglobulin heavy variable V1-54
chr12_-_115832846 2.10 ENSMUST00000199373.2
immunoglobulin heavy variable 1-78
chr11_-_69728560 1.97 ENSMUST00000108634.9
neuroligin 2
chr6_+_30723540 1.95 ENSMUST00000141130.2
ENSMUST00000115127.8
mesoderm specific transcript
chr6_+_114108190 1.92 ENSMUST00000032451.9
solute carrier family 6 (neurotransmitter transporter, GABA), member 11
chr12_-_108859123 1.86 ENSMUST00000161154.2
ENSMUST00000161410.8
tryptophanyl-tRNA synthetase
chr9_-_108903117 1.84 ENSMUST00000161521.8
ENSMUST00000045011.9
ATR interacting protein
chr5_+_14075281 1.80 ENSMUST00000073957.8
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
chrX_-_104918911 1.75 ENSMUST00000200471.2
ATRX, chromatin remodeler
chr6_+_68495964 1.75 ENSMUST00000199510.5
ENSMUST00000103325.3
immunoglobulin kappa chain variable 14-100
chr1_+_133965228 1.68 ENSMUST00000162779.2
fibromodulin
chr8_+_106877025 1.66 ENSMUST00000212963.2
ENSMUST00000034377.8
phospholipase A2, group XV
chr2_+_181007177 1.66 ENSMUST00000108807.9
zinc finger, CCCH-type with G patch domain
chr9_-_45896663 1.65 ENSMUST00000214179.2
platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr5_+_135835713 1.59 ENSMUST00000126232.8
serine/arginine repetitive matrix 3
chr4_+_32238712 1.58 ENSMUST00000108180.9
BTB and CNC homology, basic leucine zipper transcription factor 2
chr10_-_8638215 1.51 ENSMUST00000212553.2
SAM and SH3 domain containing 1
chr14_-_70043079 1.40 ENSMUST00000022665.4
Rho-related BTB domain containing 2
chr12_-_114687825 1.36 ENSMUST00000194968.6
ENSMUST00000103506.3
immunoglobulin heavy variable V1-20
chr2_+_26209755 1.33 ENSMUST00000066889.13
G-protein signalling modulator 1 (AGS3-like, C. elegans)
chr12_-_114355789 1.32 ENSMUST00000103486.2
immunoglobulin heavy variable 6-3
chr6_+_68026941 1.32 ENSMUST00000103316.2
immunoglobulin kappa chain variable 9-120
chr3_-_36529753 1.29 ENSMUST00000199478.2
annexin A5
chr6_-_13677928 1.25 ENSMUST00000203078.2
ENSMUST00000045235.8
base methyltransferase of 25S rRNA 2
chr14_-_70864666 1.24 ENSMUST00000022694.17
dematin actin binding protein
chrX_+_73298342 1.23 ENSMUST00000096424.11
emerin
chr14_+_76725876 1.21 ENSMUST00000101618.9
TSC22 domain family, member 1
chr3_+_151916106 1.13 ENSMUST00000199202.5
ENSMUST00000200524.5
ENSMUST00000198227.5
ENSMUST00000196739.5
ENSMUST00000196695.5
ENSMUST00000106121.6
far upstream element (FUSE) binding protein 1
chr13_+_83720457 1.07 ENSMUST00000196730.5
myocyte enhancer factor 2C
chrX_-_74918122 1.07 ENSMUST00000033547.14
plastin 3 (T-isoform)
chr13_+_83720484 1.05 ENSMUST00000196207.5
myocyte enhancer factor 2C
chr1_-_14374794 1.03 ENSMUST00000190337.7
EYA transcriptional coactivator and phosphatase 1
chr4_+_48045143 1.02 ENSMUST00000030025.10
nuclear receptor subfamily 4, group A, member 3
chr4_-_128503774 0.99 ENSMUST00000141040.2
ENSMUST00000147876.2
ENSMUST00000097877.9
zinc finger and SCAN domains 20
chr6_-_54949587 0.99 ENSMUST00000060655.15
nucleotide-binding oligomerization domain containing 1
chr4_-_46991842 0.92 ENSMUST00000107749.4
gamma-aminobutyric acid (GABA) B receptor, 2
chr8_+_91681550 0.92 ENSMUST00000210947.2
chromodomain helicase DNA binding protein 9
chr14_-_75185281 0.87 ENSMUST00000088970.7
ENSMUST00000228252.2
leucine-rich repeats and calponin homology (CH) domain containing 1
chr9_-_45896110 0.86 ENSMUST00000215060.2
ENSMUST00000213853.2
ENSMUST00000216334.2
platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr7_-_16790594 0.85 ENSMUST00000037762.11
hypoxia inducible factor 3, alpha subunit
chr9_-_44624496 0.83 ENSMUST00000144251.8
ENSMUST00000156918.8
pleckstrin homology like domain, family B, member 1
chr11_-_97591150 0.80 ENSMUST00000018681.14
polycomb group ring finger 2
chr2_+_169475436 0.79 ENSMUST00000109157.2
teashirt zinc finger family member 2
chr1_-_14374842 0.79 ENSMUST00000188857.7
ENSMUST00000185453.7
EYA transcriptional coactivator and phosphatase 1
chr4_-_152402915 0.77 ENSMUST00000170820.3
ENSMUST00000076183.12
ring finger protein 207
chr2_+_120807498 0.73 ENSMUST00000067582.14
transmembrane protein 62
chr9_-_56325344 0.62 ENSMUST00000061552.15
pseudopodium-enriched atypical kinase 1
chr6_+_18848600 0.61 ENSMUST00000201141.3
LSM8 homolog, U6 small nuclear RNA associated
chr7_-_30156826 0.60 ENSMUST00000045817.14
kirre like nephrin family adhesion molecule 2
chr3_+_79791798 0.58 ENSMUST00000118853.8
ENSMUST00000145992.2
golgi associated kinase 1B
chr4_+_150938376 0.57 ENSMUST00000073600.9
ERBB receptor feedback inhibitor 1
chr15_-_103231921 0.56 ENSMUST00000229551.2
zinc finger protein 385A
chr9_-_45896075 0.56 ENSMUST00000217636.2
platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr5_-_105387395 0.51 ENSMUST00000065588.7
guanylate-binding protein 10
chr6_+_18848570 0.51 ENSMUST00000056398.11
LSM8 homolog, U6 small nuclear RNA associated
chr14_+_58308004 0.49 ENSMUST00000165526.9
fibroblast growth factor 9
chr1_-_163231196 0.48 ENSMUST00000045138.6
golgin, RAB6-interacting
chr15_-_101694895 0.43 ENSMUST00000071104.6
keratin 72
chr14_+_20724378 0.38 ENSMUST00000224492.2
ENSMUST00000223751.2
ENSMUST00000225108.2
ENSMUST00000224754.2
Sec24 related gene family, member C (S. cerevisiae)
chr3_-_103716593 0.38 ENSMUST00000063502.13
ENSMUST00000106832.2
ENSMUST00000106834.8
ENSMUST00000029435.15
DNA cross-link repair 1B
chr14_+_20724366 0.36 ENSMUST00000048657.10
Sec24 related gene family, member C (S. cerevisiae)
chr2_+_5850053 0.36 ENSMUST00000127116.7
ENSMUST00000194933.2
nudix (nucleoside diphosphate linked moiety X)-type motif 5
chr6_+_115578863 0.35 ENSMUST00000000449.9
makorin, ring finger protein, 2
chr3_+_79792238 0.27 ENSMUST00000135021.2
golgi associated kinase 1B
chr2_-_181007099 0.27 ENSMUST00000108808.8
ENSMUST00000170190.8
ENSMUST00000127988.8
ADP-ribosylation factor related protein 1
chr8_-_120505104 0.27 ENSMUST00000212534.2
ENSMUST00000049156.7
MTOR associated protein , eak-7 homolog
chr6_-_39787813 0.26 ENSMUST00000114797.2
ENSMUST00000031978.9
mitochondrial ribosomal protein S33
chr9_-_96513529 0.25 ENSMUST00000034984.8
RAS p21 protein activator 2
chr17_+_34131696 0.25 ENSMUST00000174146.3
Fas death domain-associated protein
chr1_+_157286124 0.25 ENSMUST00000193791.6
ENSMUST00000046743.11
ENSMUST00000119891.7
crystallin zeta like 2
chr2_+_131104389 0.22 ENSMUST00000150843.9
pantothenate kinase 2
chr7_+_15484302 0.20 ENSMUST00000098802.10
ENSMUST00000173053.2
oocyte specific homeobox 5
chr7_-_18390645 0.20 ENSMUST00000094793.12
ENSMUST00000182128.2
pregnancy-specific glycoprotein 21
chr7_+_17447163 0.18 ENSMUST00000081907.8
carcinoembryonic antigen-related cell adhesion molecule 5
chr4_+_32238950 0.14 ENSMUST00000037416.13
BTB and CNC homology, basic leucine zipper transcription factor 2
chr3_-_87965757 0.12 ENSMUST00000029708.8
NAD(P)HX epimerase
chr8_+_11606056 0.11 ENSMUST00000210740.2
ENSMUST00000210670.2
ENSMUST00000054399.6
ENSMUST00000209646.2
inhibitor of growth family, member 1
chr1_+_93096316 0.08 ENSMUST00000138595.3
ciliary rootlet coiled-coil, rootletin family member 2
chr7_+_15484056 0.05 ENSMUST00000173455.8
oocyte specific homeobox 5
chr5_+_53424471 0.05 ENSMUST00000147148.5
small integral membrane protein 20
chr14_-_30075424 0.04 ENSMUST00000224198.3
ENSMUST00000238675.2
ENSMUST00000112249.10
ENSMUST00000224785.3
calcium channel, voltage-dependent, L type, alpha 1D subunit
chr7_+_15122873 0.04 ENSMUST00000181001.8
ENSMUST00000174076.8
ENSMUST00000174305.8
oocyte specific homeobox 1
oocyte specific homeobox 2
chr11_-_5211558 0.04 ENSMUST00000020662.15
kringle containing transmembrane protein 1
chr11_+_3438274 0.03 ENSMUST00000064265.13
phospholipase A2, group III
chr5_+_53747556 0.02 ENSMUST00000037618.13
ENSMUST00000201912.4
recombination signal binding protein for immunoglobulin kappa J region

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 4.4 GO:0021941 radial glia guided migration of cerebellar granule cell(GO:0021933) negative regulation of cerebellar granule cell precursor proliferation(GO:0021941)
0.7 4.2 GO:0035128 post-embryonic appendage morphogenesis(GO:0035120) post-embryonic limb morphogenesis(GO:0035127) post-embryonic forelimb morphogenesis(GO:0035128) telomeric repeat-containing RNA transcription(GO:0097393) telomeric repeat-containing RNA transcription from RNA pol II promoter(GO:0097394) regulation of telomeric RNA transcription from RNA pol II promoter(GO:1901580) negative regulation of telomeric RNA transcription from RNA pol II promoter(GO:1901581) positive regulation of telomeric RNA transcription from RNA pol II promoter(GO:1901582)
0.7 2.0 GO:0001966 thigmotaxis(GO:0001966)
0.6 2.5 GO:0071544 diphosphoinositol polyphosphate catabolic process(GO:0071544)
0.6 4.1 GO:1900170 negative regulation of glucocorticoid mediated signaling pathway(GO:1900170)
0.6 1.7 GO:0046338 phosphatidylethanolamine catabolic process(GO:0046338)
0.5 1.9 GO:0006436 tryptophanyl-tRNA aminoacylation(GO:0006436)
0.3 1.5 GO:1902498 regulation of protein autoubiquitination(GO:1902498)
0.3 0.8 GO:1903116 positive regulation of actin filament-based movement(GO:1903116)
0.3 1.0 GO:1900623 positive regulation of mast cell cytokine production(GO:0032765) regulation of monocyte aggregation(GO:1900623) positive regulation of monocyte aggregation(GO:1900625)
0.2 1.3 GO:0070459 prolactin secretion(GO:0070459)
0.2 1.2 GO:0035585 calcium-mediated signaling using extracellular calcium source(GO:0035585)
0.2 2.1 GO:0003138 primary heart field specification(GO:0003138) sinoatrial valve development(GO:0003172) sinoatrial valve morphogenesis(GO:0003185)
0.2 5.6 GO:1902043 positive regulation of extrinsic apoptotic signaling pathway via death domain receptors(GO:1902043)
0.2 1.8 GO:0072513 positive regulation of secondary heart field cardioblast proliferation(GO:0072513)
0.1 0.6 GO:0010609 mRNA localization resulting in posttranscriptional regulation of gene expression(GO:0010609) positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator(GO:1902164)
0.1 1.0 GO:0002604 regulation of dendritic cell antigen processing and presentation(GO:0002604) positive regulation of dendritic cell antigen processing and presentation(GO:0002606)
0.1 2.2 GO:0006620 posttranslational protein targeting to membrane(GO:0006620)
0.1 0.6 GO:1903243 negative regulation of cardiac muscle adaptation(GO:0010616) negative regulation of cardiac muscle hypertrophy in response to stress(GO:1903243)
0.1 0.4 GO:0031860 telomeric 3' overhang formation(GO:0031860)
0.1 2.7 GO:0048268 clathrin coat assembly(GO:0048268)
0.1 1.7 GO:0007175 negative regulation of epidermal growth factor-activated receptor activity(GO:0007175)
0.1 6.9 GO:0061178 regulation of insulin secretion involved in cellular response to glucose stimulus(GO:0061178)
0.1 1.2 GO:0035414 negative regulation of catenin import into nucleus(GO:0035414)
0.1 0.8 GO:2001197 regulation of basement membrane assembly involved in embryonic body morphogenesis(GO:1904259) positive regulation of basement membrane assembly involved in embryonic body morphogenesis(GO:1904261) basement membrane assembly involved in embryonic body morphogenesis(GO:2001197)
0.0 0.2 GO:0072737 response to diamide(GO:0072737) cellular response to diamide(GO:0072738)
0.0 6.9 GO:0006910 phagocytosis, recognition(GO:0006910)
0.0 2.5 GO:0009954 proximal/distal pattern formation(GO:0009954)
0.0 1.8 GO:0001953 negative regulation of cell-matrix adhesion(GO:0001953)
0.0 3.1 GO:0016239 positive regulation of macroautophagy(GO:0016239)
0.0 0.7 GO:0090110 cargo loading into COPII-coated vesicle(GO:0090110)
0.0 1.1 GO:0051639 actin filament network formation(GO:0051639)
0.0 0.5 GO:1901620 regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning(GO:1901620)
0.0 1.9 GO:0010883 regulation of lipid storage(GO:0010883)
0.0 0.5 GO:0032927 positive regulation of activin receptor signaling pathway(GO:0032927)
0.0 1.1 GO:0071425 hematopoietic stem cell proliferation(GO:0071425)
0.0 0.1 GO:0006014 D-ribose metabolic process(GO:0006014) pentose catabolic process(GO:0019323)
0.0 0.2 GO:1904251 regulation of bile acid metabolic process(GO:1904251)
0.0 0.9 GO:0007214 gamma-aminobutyric acid signaling pathway(GO:0007214)
0.0 3.1 GO:0002377 immunoglobulin production(GO:0002377)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 4.2 GO:1990707 subtelomeric heterochromatin(GO:1990421) nuclear subtelomeric heterochromatin(GO:1990707)
0.2 0.9 GO:0038039 G-protein coupled receptor heterodimeric complex(GO:0038039)
0.2 1.2 GO:0031095 platelet dense tubular network membrane(GO:0031095)
0.1 1.2 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.1 2.0 GO:0097470 ribbon synapse(GO:0097470)
0.1 1.1 GO:0005688 U6 snRNP(GO:0005688)
0.1 0.8 GO:0001739 sex chromatin(GO:0001739)
0.1 6.9 GO:0042571 immunoglobulin complex, circulating(GO:0042571)
0.1 2.7 GO:0030131 clathrin adaptor complex(GO:0030131)
0.0 0.7 GO:0030127 COPII vesicle coat(GO:0030127)
0.0 0.6 GO:0036057 filtration diaphragm(GO:0036056) slit diaphragm(GO:0036057)
0.0 5.6 GO:0005875 microtubule associated complex(GO:0005875)
0.0 1.7 GO:0031463 Cul3-RING ubiquitin ligase complex(GO:0031463)
0.0 0.3 GO:0031235 intrinsic component of the cytoplasmic side of the plasma membrane(GO:0031235)
0.0 3.1 GO:0001650 fibrillar center(GO:0001650)
0.0 6.3 GO:0014069 postsynaptic density(GO:0014069)
0.0 1.1 GO:0032420 stereocilium(GO:0032420)
0.0 0.4 GO:0045095 keratin filament(GO:0045095)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 4.1 GO:0038049 glucocorticoid receptor activity(GO:0004883) transcription factor activity, ligand-activated RNA polymerase II transcription factor binding(GO:0038049) glucocorticoid-activated RNA polymerase II transcription factor binding transcription factor activity(GO:0038051)
0.6 4.2 GO:0015616 DNA translocase activity(GO:0015616)
0.5 1.9 GO:0004830 tryptophan-tRNA ligase activity(GO:0004830)
0.4 3.1 GO:0047179 platelet-activating factor acetyltransferase activity(GO:0047179)
0.4 2.5 GO:0000298 endopolyphosphatase activity(GO:0000298) diphosphoinositol-polyphosphate diphosphatase activity(GO:0008486) bis(5'-adenosyl)-hexaphosphatase activity(GO:0034431) bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.3 1.9 GO:0005332 gamma-aminobutyric acid:sodium symporter activity(GO:0005332)
0.2 1.3 GO:0016433 rRNA (adenine) methyltransferase activity(GO:0016433)
0.2 4.0 GO:0030215 semaphorin receptor binding(GO:0030215)
0.2 1.7 GO:0047499 calcium-independent phospholipase A2 activity(GO:0047499)
0.2 6.9 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.2 0.9 GO:0004965 G-protein coupled GABA receptor activity(GO:0004965)
0.1 2.0 GO:0042043 neurexin family protein binding(GO:0042043)
0.1 1.4 GO:0001206 transcriptional repressor activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001206)
0.1 1.0 GO:0050700 CARD domain binding(GO:0050700)
0.1 2.1 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.8 GO:0097027 ubiquitin-protein transferase activator activity(GO:0097027)
0.1 5.6 GO:0005080 protein kinase C binding(GO:0005080)
0.1 6.9 GO:0034987 immunoglobulin receptor binding(GO:0034987)
0.1 1.3 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.0 1.3 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.0 0.4 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.0 0.2 GO:0004594 pantothenate kinase activity(GO:0004594)
0.0 0.1 GO:0044715 8-oxo-dGDP phosphatase activity(GO:0044715)
0.0 1.5 GO:0031435 mitogen-activated protein kinase kinase kinase binding(GO:0031435)
0.0 0.7 GO:0070530 K63-linked polyubiquitin binding(GO:0070530)
0.0 1.0 GO:0035259 glucocorticoid receptor binding(GO:0035259)
0.0 2.7 GO:0003823 antigen binding(GO:0003823)
0.0 1.1 GO:0001205 transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001205)
0.0 2.7 GO:0008565 protein transporter activity(GO:0008565)
0.0 1.8 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.0 1.2 GO:0030507 spectrin binding(GO:0030507)
0.0 0.0 GO:0086059 voltage-gated calcium channel activity involved SA node cell action potential(GO:0086059)
0.0 0.5 GO:0005104 fibroblast growth factor receptor binding(GO:0005104)
0.0 0.8 GO:0030544 Hsp70 protein binding(GO:0030544)
0.0 1.8 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 6.1 PID HDAC CLASSII PATHWAY Signaling events mediated by HDAC Class II
0.1 3.1 PID LIS1 PATHWAY Lissencephaly gene (LIS1) in neuronal migration and development
0.0 0.8 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.0 2.7 PID HNF3A PATHWAY FOXA1 transcription factor network
0.0 1.7 NABA PROTEOGLYCANS Genes encoding proteoglycans
0.0 1.8 PID FANCONI PATHWAY Fanconi anemia pathway
0.0 1.0 ST GA12 PATHWAY G alpha 12 Pathway
0.0 2.2 NABA ECM AFFILIATED Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 2.7 REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression
0.1 1.8 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.1 1.7 REACTOME KERATAN SULFATE DEGRADATION Genes involved in Keratan sulfate degradation
0.1 1.9 REACTOME NA CL DEPENDENT NEUROTRANSMITTER TRANSPORTERS Genes involved in Na+/Cl- dependent neurotransmitter transporters
0.1 4.1 REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
0.1 1.8 REACTOME OTHER SEMAPHORIN INTERACTIONS Genes involved in Other semaphorin interactions
0.1 1.9 REACTOME CYTOSOLIC TRNA AMINOACYLATION Genes involved in Cytosolic tRNA aminoacylation
0.0 2.1 REACTOME CIRCADIAN CLOCK Genes involved in Circadian Clock
0.0 0.9 REACTOME CLASS C 3 METABOTROPIC GLUTAMATE PHEROMONE RECEPTORS Genes involved in Class C/3 (Metabotropic glutamate/pheromone receptors)
0.0 0.8 REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha
0.0 0.7 REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC Genes involved in Antigen Presentation: Folding, assembly and peptide loading of class I MHC
0.0 1.0 REACTOME ACTIVATED TAK1 MEDIATES P38 MAPK ACTIVATION Genes involved in activated TAK1 mediates p38 MAPK activation
0.0 0.5 REACTOME FGFR4 LIGAND BINDING AND ACTIVATION Genes involved in FGFR4 ligand binding and activation
0.0 0.6 REACTOME NEPHRIN INTERACTIONS Genes involved in Nephrin interactions
0.0 0.2 REACTOME VITAMIN B5 PANTOTHENATE METABOLISM Genes involved in Vitamin B5 (pantothenate) metabolism