Project

PRJNA375882: Comprehensive Mouse Transcriptomic BodyMap

Navigation
Downloads

Results for Sox13

Z-value: 0.49

Motif logo

logo of

Transcription factors associated with Sox13

Gene Symbol Gene ID Gene Info
Sox13
ENSMUSG00000070643.12 Sox13

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Sox13mm39_v1_chr1_-_133352115_1333521380.209.0e-02Click!

Activity profile of Sox13 motif

Sorted Z-values of Sox13 motif

Network of associatons between targets according to the STRING database.

First level regulatory network of Sox13

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Top targets:

Promoter Score Transcript Gene Gene Info
chr11_-_99328969 6.52 ENSMUST00000017743.3
Krt20
keratin 20
chr7_+_121818692 4.75 ENSMUST00000033152.5
Chp2
calcineurin-like EF hand protein 2
chrX_+_156485570 2.30 ENSMUST00000112520.2
Smpx
small muscle protein, X-linked
chr8_-_62576140 2.05 ENSMUST00000034052.14
ENSMUST00000034054.9
Anxa10
annexin A10
chr6_-_87312743 1.53 ENSMUST00000042025.12
ENSMUST00000205033.2
Antxr1
anthrax toxin receptor 1
chr12_+_8062331 1.53 ENSMUST00000171239.2
Apob
apolipoprotein B
chr6_-_70435020 1.50 ENSMUST00000198184.2
Igkv6-13
immunoglobulin kappa variable 6-13
chr6_-_87312681 1.30 ENSMUST00000204805.3
Antxr1
anthrax toxin receptor 1
chr10_-_117074501 1.25 ENSMUST00000159193.8
ENSMUST00000020392.5
9530003J23Rik
RIKEN cDNA 9530003J23 gene
chr4_-_58499398 1.17 ENSMUST00000107570.2
Lpar1
lysophosphatidic acid receptor 1
chrX_+_132751729 1.16 ENSMUST00000033602.9
Tnmd
tenomodulin
chr1_+_172327812 1.10 ENSMUST00000192460.2
Tagln2
transgelin 2
chr6_-_68994064 1.07 ENSMUST00000103341.4
Igkv4-80
immunoglobulin kappa variable 4-80
chr6_-_69377328 0.88 ENSMUST00000198345.2
Igkv4-62
immunoglobulin kappa variable 4-62
chr19_+_41471067 0.83 ENSMUST00000067795.13
Lcor
ligand dependent nuclear receptor corepressor
chr3_-_141687987 0.67 ENSMUST00000029948.15
Bmpr1b
bone morphogenetic protein receptor, type 1B
chr2_-_104324035 0.67 ENSMUST00000111124.8
Hipk3
homeodomain interacting protein kinase 3
chr6_+_48951872 0.60 ENSMUST00000184917.6
Doxl2
diamine oxidase-like protein 2
chr8_+_3543131 0.57 ENSMUST00000061508.8
ENSMUST00000207318.2
Zfp358
zinc finger protein 358
chr6_+_67701864 0.55 ENSMUST00000103304.3
Igkv1-133
immunoglobulin kappa variable 1-133
chr12_-_104439589 0.51 ENSMUST00000021513.6
Gsc
goosecoid homeobox
chr3_-_75177378 0.44 ENSMUST00000039047.5
Serpini2
serine (or cysteine) peptidase inhibitor, clade I, member 2
chr5_-_86666408 0.36 ENSMUST00000140095.2
ENSMUST00000134179.8
Tmprss11g
transmembrane protease, serine 11g
chr6_+_43150886 0.35 ENSMUST00000059512.5
Olfr13
olfactory receptor 13
chr19_+_41471395 0.31 ENSMUST00000237208.2
ENSMUST00000238398.2
Lcor
ligand dependent nuclear receptor corepressor
chr9_+_40098375 0.30 ENSMUST00000062229.6
Olfr986
olfactory receptor 986
chr6_+_131463363 0.25 ENSMUST00000159229.3
ENSMUST00000075020.10
Gm6619
5430401F13Rik
predicted gene 6619
RIKEN cDNA 5430401F13 gene
chr19_-_18978463 0.23 ENSMUST00000040153.15
ENSMUST00000112828.8
Rorb
RAR-related orphan receptor beta
chr9_+_38432876 0.20 ENSMUST00000216496.2
Olfr911-ps1
olfactory receptor 911, pseudogene 1
chr6_-_93769426 0.18 ENSMUST00000204788.2
Magi1
membrane associated guanylate kinase, WW and PDZ domain containing 1
chr17_-_24054717 0.13 ENSMUST00000059906.8
Prss33
protease, serine 33
chr11_+_29668563 0.12 ENSMUST00000060992.6
Rtn4
reticulon 4
chr10_+_57362512 0.11 ENSMUST00000220042.2
Hsf2
heat shock factor 2
chr4_-_115638209 0.11 ENSMUST00000106521.2
Tex38
testis expressed 38
chr10_+_57362457 0.09 ENSMUST00000079833.6
Hsf2
heat shock factor 2
chr5_-_24782465 0.03 ENSMUST00000030795.10
Abcf2
ATP-binding cassette, sub-family F (GCN20), member 2
chr2_-_35994072 0.01 ENSMUST00000112961.10
ENSMUST00000112966.10
Lhx6
LIM homeobox protein 6
chr2_-_89448589 0.01 ENSMUST00000216129.2
Olfr1248
olfactory receptor 1248
chr1_+_19173246 0.01 ENSMUST00000037294.8
Tfap2d
transcription factor AP-2, delta

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.8 GO:1903054 negative regulation of extracellular matrix organization(GO:1903054)
0.3 1.2 GO:1904565 response to 1-oleoyl-sn-glycerol 3-phosphate(GO:1904565) cellular response to 1-oleoyl-sn-glycerol 3-phosphate(GO:1904566)
0.2 6.5 GO:0045109 intermediate filament organization(GO:0045109)
0.2 4.7 GO:0070886 positive regulation of calcineurin-NFAT signaling cascade(GO:0070886)
0.1 0.7 GO:0048165 ovarian cumulus expansion(GO:0001550) fused antrum stage(GO:0048165)
0.1 1.5 GO:0006642 triglyceride mobilization(GO:0006642)
0.1 1.3 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.0 0.5 GO:0014029 neural crest formation(GO:0014029)
0.0 1.2 GO:0001886 endothelial cell morphogenesis(GO:0001886)
0.0 0.7 GO:0043508 negative regulation of JUN kinase activity(GO:0043508)
0.0 0.2 GO:0046549 retinal cone cell development(GO:0046549)
0.0 4.0 GO:0002377 immunoglobulin production(GO:0002377)
0.0 0.1 GO:0071787 endoplasmic reticulum tubular network assembly(GO:0071787)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.5 GO:0034359 mature chylomicron(GO:0034359)
0.3 2.3 GO:0005927 muscle tendon junction(GO:0005927)
0.2 2.8 GO:0031258 lamellipodium membrane(GO:0031258)
0.0 6.5 GO:0005882 intermediate filament(GO:0005882)
0.0 0.3 GO:0090543 Flemming body(GO:0090543)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.2 GO:0070915 lysophosphatidic acid receptor activity(GO:0070915)
0.1 1.5 GO:0035473 lipase binding(GO:0035473)
0.1 1.3 GO:0003796 lysozyme activity(GO:0003796)
0.1 0.7 GO:0005025 transforming growth factor beta receptor activity, type I(GO:0005025)
0.0 0.2 GO:0008502 melatonin receptor activity(GO:0008502)
0.0 2.8 GO:0005518 collagen binding(GO:0005518)
0.0 2.1 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.0 0.2 GO:0001162 RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding(GO:0001162)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 2.8 PID ANTHRAX PATHWAY Cellular roles of Anthrax toxin
0.0 1.5 PID HNF3A PATHWAY FOXA1 transcription factor network
0.0 1.3 PID ERA GENOMIC PATHWAY Validated nuclear estrogen receptor alpha network
0.0 0.7 PID BMP PATHWAY BMP receptor signaling
0.0 1.2 PID LYSOPHOSPHOLIPID PATHWAY LPA receptor mediated events
0.0 2.1 NABA ECM AFFILIATED Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.5 REACTOME CHYLOMICRON MEDIATED LIPID TRANSPORT Genes involved in Chylomicron-mediated lipid transport
0.0 0.7 REACTOME SIGNALING BY BMP Genes involved in Signaling by BMP