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PRJNA375882: Comprehensive Mouse Transcriptomic BodyMap

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Results for UAAGACG

Z-value: 0.35

Motif logo

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miRNA associated with seed UAAGACG

NamemiRBASE accession
mmu-miR-208a-3p
MIMAT0000520
mmu-miR-208b-3p
MIMAT0004939

Activity profile of UAAGACG motif

Sorted Z-values of UAAGACG motif

Network of associatons between targets according to the STRING database.

First level regulatory network of UAAGACG

PNG image of the network

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Top targets:

Promoter Score Transcript Gene Gene Info
chr14_-_31299275 2.15 ENSMUST00000112027.9
Colq
collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
chr17_-_52139693 1.91 ENSMUST00000144331.8
Satb1
special AT-rich sequence binding protein 1
chr10_-_23225781 1.55 ENSMUST00000092665.12
Eya4
EYA transcriptional coactivator and phosphatase 4
chr1_-_69724939 1.23 ENSMUST00000027146.9
Ikzf2
IKAROS family zinc finger 2
chr3_-_119576911 1.17 ENSMUST00000197464.5
ENSMUST00000198403.2
ENSMUST00000029780.12
Ptbp2
polypyrimidine tract binding protein 2
chr9_+_72439496 0.99 ENSMUST00000163401.9
ENSMUST00000093820.10
Rfx7
regulatory factor X, 7
chr12_-_107969853 0.93 ENSMUST00000066060.11
Bcl11b
B cell leukemia/lymphoma 11B
chr10_-_45346297 0.82 ENSMUST00000079390.7
Lin28b
lin-28 homolog B (C. elegans)
chr16_+_17051423 0.77 ENSMUST00000090190.14
ENSMUST00000232082.2
ENSMUST00000232426.2
Hic2
Gm49573
hypermethylated in cancer 2
predicted gene, 49573
chr17_+_6869070 0.76 ENSMUST00000092966.5
Dynlt1c
dynein light chain Tctex-type 1C
chr6_-_39183712 0.70 ENSMUST00000002305.9
Kdm7a
lysine (K)-specific demethylase 7A
chr12_-_73093953 0.69 ENSMUST00000050029.8
Six1
sine oculis-related homeobox 1
chr2_-_6889783 0.66 ENSMUST00000170438.8
ENSMUST00000114924.10
ENSMUST00000114934.11
Celf2
CUGBP, Elav-like family member 2
chr2_-_37537224 0.65 ENSMUST00000028279.10
Strbp
spermatid perinuclear RNA binding protein
chr17_-_6367692 0.64 ENSMUST00000232499.2
ENSMUST00000169415.3
Dynlt1a
dynein light chain Tctex-type 1A
chr11_+_44508137 0.63 ENSMUST00000109268.2
ENSMUST00000101326.10
ENSMUST00000081265.12
Ebf1
early B cell factor 1
chr19_-_14575395 0.61 ENSMUST00000052011.15
ENSMUST00000167776.3
Tle4
transducin-like enhancer of split 4
chr7_-_115637970 0.60 ENSMUST00000166877.8
Sox6
SRY (sex determining region Y)-box 6
chr10_+_39245746 0.57 ENSMUST00000063091.13
ENSMUST00000099967.10
ENSMUST00000126486.8
Fyn
Fyn proto-oncogene
chr11_+_98798627 0.55 ENSMUST00000092706.13
Cdc6
cell division cycle 6
chr13_-_111626562 0.55 ENSMUST00000091236.11
ENSMUST00000047627.14
Gpbp1
GC-rich promoter binding protein 1
chr1_-_97589675 0.50 ENSMUST00000053033.14
ENSMUST00000149927.2
Macir
macrophage immunometabolism regulator
chr17_-_6923299 0.48 ENSMUST00000179554.3
Dynlt1f
dynein light chain Tctex-type 1F
chr15_+_96185399 0.48 ENSMUST00000134985.9
ENSMUST00000096250.5
Arid2
AT rich interactive domain 2 (ARID, RFX-like)
chr1_+_74545203 0.48 ENSMUST00000087215.7
Cnot9
CCR4-NOT transcription complex, subunit 9
chr1_+_99700490 0.47 ENSMUST00000086738.10
Cntnap5b
contactin associated protein-like 5B
chr6_-_145811028 0.44 ENSMUST00000111703.2
Bhlhe41
basic helix-loop-helix family, member e41
chr9_-_75316625 0.43 ENSMUST00000168937.8
Mapk6
mitogen-activated protein kinase 6
chr3_+_137570334 0.39 ENSMUST00000174561.8
ENSMUST00000173790.8
H2az1
H2A.Z variant histone 1
chr3_-_116217579 0.39 ENSMUST00000106491.7
ENSMUST00000090464.7
Cdc14a
CDC14 cell division cycle 14A
chr13_-_43634695 0.39 ENSMUST00000144326.4
Ranbp9
RAN binding protein 9
chr19_+_41471067 0.38 ENSMUST00000067795.13
Lcor
ligand dependent nuclear receptor corepressor
chr10_-_58511476 0.35 ENSMUST00000003312.5
Edar
ectodysplasin-A receptor
chr13_-_56283331 0.33 ENSMUST00000045788.9
ENSMUST00000016081.13
Macroh2a1
macroH2A.1 histone
chr10_-_115151451 0.33 ENSMUST00000020343.9
ENSMUST00000218831.2
Rab21
RAB21, member RAS oncogene family
chr14_-_61677258 0.32 ENSMUST00000022496.9
Kpna3
karyopherin (importin) alpha 3
chr11_-_66416790 0.32 ENSMUST00000066679.7
Shisa6
shisa family member 6
chr6_-_99643723 0.25 ENSMUST00000032151.3
Eif4e3
eukaryotic translation initiation factor 4E member 3
chr1_-_22031718 0.25 ENSMUST00000029667.13
ENSMUST00000173058.8
ENSMUST00000173404.2
Kcnq5
potassium voltage-gated channel, subfamily Q, member 5
chr12_+_112978051 0.25 ENSMUST00000223502.2
ENSMUST00000084891.5
ENSMUST00000220541.2
Pacs2
phosphofurin acidic cluster sorting protein 2
chr6_-_100264439 0.24 ENSMUST00000101118.4
Rybp
RING1 and YY1 binding protein
chr9_-_72019109 0.24 ENSMUST00000183404.8
ENSMUST00000184783.8
Tcf12
transcription factor 12
chr10_-_118705029 0.24 ENSMUST00000004281.10
Dyrk2
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
chr17_-_13211075 0.23 ENSMUST00000159986.8
ENSMUST00000007007.14
Wtap
Wilms tumour 1-associating protein
chr1_-_119765343 0.23 ENSMUST00000064091.12
Ptpn4
protein tyrosine phosphatase, non-receptor type 4
chr4_-_41314877 0.23 ENSMUST00000030145.9
Dcaf12
DDB1 and CUL4 associated factor 12
chr12_+_32428691 0.22 ENSMUST00000172332.4
Ccdc71l
coiled-coil domain containing 71 like
chr14_-_20596580 0.22 ENSMUST00000022355.11
ENSMUST00000161445.8
ENSMUST00000159027.8
Ppp3cb
protein phosphatase 3, catalytic subunit, beta isoform
chr4_+_140875222 0.20 ENSMUST00000030757.10
Fbxo42
F-box protein 42
chr11_+_44409775 0.20 ENSMUST00000019333.10
Rnf145
ring finger protein 145
chr14_-_105414294 0.20 ENSMUST00000163545.8
Rbm26
RNA binding motif protein 26
chr8_-_8740471 0.20 ENSMUST00000048545.10
Arglu1
arginine and glutamate rich 1
chr2_+_121859025 0.19 ENSMUST00000028668.8
Eif3j1
eukaryotic translation initiation factor 3, subunit J1
chr11_+_54329014 0.19 ENSMUST00000046835.14
Fnip1
folliculin interacting protein 1
chr6_+_38410848 0.19 ENSMUST00000160583.8
Ubn2
ubinuclein 2
chr4_+_106173384 0.18 ENSMUST00000165709.8
ENSMUST00000094933.5
Usp24
ubiquitin specific peptidase 24
chr3_+_94744844 0.18 ENSMUST00000107270.9
Pogz
pogo transposable element with ZNF domain
chr1_+_43973167 0.17 ENSMUST00000087933.10
ENSMUST00000188313.7
Tpp2
tripeptidyl peptidase II
chr4_-_119151717 0.17 ENSMUST00000079644.13
Ybx1
Y box protein 1
chr5_+_67765216 0.17 ENSMUST00000087241.7
Shisa3
shisa family member 3
chr4_-_126323291 0.16 ENSMUST00000069097.13
Ago3
argonaute RISC catalytic subunit 3
chr3_+_109247938 0.16 ENSMUST00000046864.14
Vav3
vav 3 oncogene
chr9_+_86349207 0.15 ENSMUST00000190957.7
Dop1a
DOP1 leucine zipper like protein A
chr16_-_22475915 0.15 ENSMUST00000089925.10
Dgkg
diacylglycerol kinase, gamma
chr12_-_91556761 0.15 ENSMUST00000021345.14
Gtf2a1
general transcription factor II A, 1
chr7_-_66339319 0.14 ENSMUST00000124899.8
Asb7
ankyrin repeat and SOCS box-containing 7
chr17_+_83658354 0.14 ENSMUST00000096766.12
ENSMUST00000049503.10
ENSMUST00000112363.10
ENSMUST00000234460.2
Eml4
echinoderm microtubule associated protein like 4
chr9_+_45029080 0.13 ENSMUST00000170998.9
ENSMUST00000093855.4
Scn2b
sodium channel, voltage-gated, type II, beta
chr1_-_9818601 0.13 ENSMUST00000057438.7
Vcpip1
valosin containing protein (p97)/p47 complex interacting protein 1
chr12_+_49429574 0.12 ENSMUST00000179669.3
Foxg1
forkhead box G1
chr6_-_51446752 0.12 ENSMUST00000204188.3
ENSMUST00000203220.3
ENSMUST00000114459.8
ENSMUST00000090002.10
Hnrnpa2b1
heterogeneous nuclear ribonucleoprotein A2/B1
chr2_-_73722874 0.11 ENSMUST00000136958.8
ENSMUST00000112010.9
ENSMUST00000128531.8
ENSMUST00000112017.8
Atf2
activating transcription factor 2
chr8_-_94739469 0.11 ENSMUST00000053766.14
Amfr
autocrine motility factor receptor
chr4_-_91260265 0.10 ENSMUST00000107110.8
ENSMUST00000008633.15
ENSMUST00000107118.8
Elavl2
ELAV like RNA binding protein 1
chr12_-_13299197 0.09 ENSMUST00000071103.10
Ddx1
DEAD box helicase 1
chr13_-_48779072 0.09 ENSMUST00000035824.11
Ptpdc1
protein tyrosine phosphatase domain containing 1
chr1_+_172525613 0.08 ENSMUST00000038495.5
Crp
C-reactive protein, pentraxin-related
chr4_+_137943603 0.08 ENSMUST00000105827.8
Hp1bp3
heterochromatin protein 1, binding protein 3
chr16_+_43993599 0.07 ENSMUST00000119746.8
ENSMUST00000088356.10
ENSMUST00000169582.3
Usf3
upstream transcription factor family member 3
chr7_-_78228116 0.07 ENSMUST00000206268.2
ENSMUST00000039431.14
Ntrk3
neurotrophic tyrosine kinase, receptor, type 3
chr2_+_160487801 0.06 ENSMUST00000109468.3
Top1
topoisomerase (DNA) I
chr11_+_94218810 0.06 ENSMUST00000107818.9
ENSMUST00000051221.13
Ankrd40
ankyrin repeat domain 40
chr3_+_136375839 0.06 ENSMUST00000070198.14
Ppp3ca
protein phosphatase 3, catalytic subunit, alpha isoform
chr11_+_97306353 0.06 ENSMUST00000121799.8
Arhgap23
Rho GTPase activating protein 23
chr13_+_95012107 0.06 ENSMUST00000022195.13
Otp
orthopedia homeobox
chr4_+_123798625 0.06 ENSMUST00000030400.14
Mycbp
MYC binding protein
chr14_-_63482668 0.05 ENSMUST00000118022.8
Gata4
GATA binding protein 4
chr1_-_54596754 0.05 ENSMUST00000097739.5
Pgap1
post-GPI attachment to proteins 1
chr4_+_5644090 0.05 ENSMUST00000054857.13
Fam110b
family with sequence similarity 110, member B
chr4_+_116578117 0.05 ENSMUST00000045542.13
ENSMUST00000106459.8
Tesk2
testis-specific kinase 2
chr7_+_48896560 0.04 ENSMUST00000184945.8
Nav2
neuron navigator 2
chr15_-_84739292 0.04 ENSMUST00000016768.12
Phf21b
PHD finger protein 21B
chr3_+_41510160 0.03 ENSMUST00000026865.15
ENSMUST00000194181.6
ENSMUST00000195846.6
Jade1
jade family PHD finger 1
chr1_+_131755715 0.03 ENSMUST00000086559.7
Slc41a1
solute carrier family 41, member 1
chr17_+_29768757 0.03 ENSMUST00000048677.9
ENSMUST00000150388.3
Tbc1d22b
Gm28052
TBC1 domain family, member 22B
predicted gene, 28052
chr1_-_64160557 0.03 ENSMUST00000055001.10
ENSMUST00000114086.8
Klf7
Kruppel-like factor 7 (ubiquitous)
chrX_-_87159237 0.02 ENSMUST00000113966.8
ENSMUST00000113964.2
Il1rapl1
interleukin 1 receptor accessory protein-like 1

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 2.8 GO:0008582 regulation of synaptic growth at neuromuscular junction(GO:0008582)
0.3 0.9 GO:0097535 lymphoid lineage cell migration(GO:0097534) lymphoid lineage cell migration into thymus(GO:0097535)
0.2 0.7 GO:0035574 histone H4-K20 demethylation(GO:0035574)
0.1 0.8 GO:0010587 miRNA catabolic process(GO:0010587)
0.1 1.6 GO:0016576 histone dephosphorylation(GO:0016576)
0.1 1.9 GO:0043374 CD8-positive, alpha-beta T cell differentiation(GO:0043374)
0.1 0.5 GO:2000325 regulation of ligand-dependent nuclear receptor transcription coactivator activity(GO:2000325) positive regulation of ligand-dependent nuclear receptor transcription coactivator activity(GO:2000327)
0.1 0.6 GO:1902951 negative regulation of dendritic spine maintenance(GO:1902951)
0.1 0.6 GO:2000741 positive regulation of mesenchymal stem cell differentiation(GO:2000741)
0.0 0.1 GO:0021852 pyramidal neuron migration(GO:0021852)
0.0 0.3 GO:0060662 tube lumen cavitation(GO:0060605) salivary gland cavitation(GO:0060662)
0.0 0.1 GO:1990428 miRNA transport(GO:1990428)
0.0 0.2 GO:0001915 negative regulation of T cell mediated cytotoxicity(GO:0001915)
0.0 1.8 GO:0006376 mRNA splice site selection(GO:0006376)
0.0 0.4 GO:0051256 mitotic spindle midzone assembly(GO:0051256)
0.0 0.2 GO:0070934 CRD-mediated mRNA stabilization(GO:0070934)
0.0 0.5 GO:0060982 coronary artery morphogenesis(GO:0060982)
0.0 0.1 GO:0032915 positive regulation of transforming growth factor beta2 production(GO:0032915)
0.0 0.1 GO:0046684 response to pyrethroid(GO:0046684)
0.0 0.2 GO:0051534 negative regulation of NFAT protein import into nucleus(GO:0051534)
0.0 0.4 GO:0010944 negative regulation of transcription by competitive promoter binding(GO:0010944)
0.0 0.1 GO:0090168 Golgi reassembly(GO:0090168)
0.0 0.1 GO:0097298 regulation of nucleus size(GO:0097298)
0.0 0.3 GO:2000643 positive regulation of early endosome to late endosome transport(GO:2000643)
0.0 0.1 GO:0010615 positive regulation of cardiac muscle adaptation(GO:0010615) positive regulation of cardiac muscle hypertrophy in response to stress(GO:1903244)
0.0 0.1 GO:0060464 lung lobe formation(GO:0060464) diaphragm morphogenesis(GO:0060540)
0.0 0.2 GO:0002904 positive regulation of B cell apoptotic process(GO:0002904)
0.0 0.2 GO:0080009 mRNA methylation(GO:0080009)
0.0 0.2 GO:0035280 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280)
0.0 0.6 GO:0051984 positive regulation of chromosome segregation(GO:0051984)
0.0 0.1 GO:0048691 positive regulation of sprouting of injured axon(GO:0048687) positive regulation of axon extension involved in regeneration(GO:0048691)
0.0 0.2 GO:0034497 protein localization to pre-autophagosomal structure(GO:0034497)
0.0 0.3 GO:0048172 regulation of short-term neuronal synaptic plasticity(GO:0048172)
0.0 0.3 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.1 GO:0032929 negative regulation of superoxide anion generation(GO:0032929)
0.0 0.1 GO:1903608 protein localization to cytoplasmic stress granule(GO:1903608)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0032156 septin cytoskeleton(GO:0032156)
0.1 0.3 GO:0098559 cytoplasmic side of early endosome membrane(GO:0098559)
0.1 1.9 GO:0005868 cytoplasmic dynein complex(GO:0005868)
0.0 0.5 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.0 0.3 GO:0005955 calcineurin complex(GO:0005955)
0.0 0.2 GO:0036396 MIS complex(GO:0036396)
0.0 0.2 GO:0070937 CRD-mediated mRNA stability complex(GO:0070937)
0.0 0.1 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.0 0.1 GO:0071920 cleavage body(GO:0071920)
0.0 1.9 GO:0005720 nuclear heterochromatin(GO:0005720)
0.0 0.2 GO:0035068 micro-ribonucleoprotein complex(GO:0035068)
0.0 1.9 GO:0031594 neuromuscular junction(GO:0031594)
0.0 0.6 GO:0051233 spindle midzone(GO:0051233)
0.0 0.5 GO:0090544 BAF-type complex(GO:0090544)
0.0 0.2 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:0035575 histone demethylase activity (H4-K20 specific)(GO:0035575)
0.1 0.4 GO:0071820 N-box binding(GO:0071820)
0.1 0.6 GO:0042610 CD8 receptor binding(GO:0042610)
0.0 0.3 GO:0033192 calmodulin-dependent protein phosphatase activity(GO:0033192)
0.0 0.2 GO:0008240 tripeptidyl-peptidase activity(GO:0008240)
0.0 1.9 GO:0036002 pre-mRNA binding(GO:0036002)
0.0 0.2 GO:0004726 non-membrane spanning protein tyrosine phosphatase activity(GO:0004726)
0.0 0.6 GO:0070742 C2H2 zinc finger domain binding(GO:0070742)
0.0 0.2 GO:0042030 ATPase inhibitor activity(GO:0042030)
0.0 0.1 GO:1904288 BAT3 complex binding(GO:1904288)
0.0 0.1 GO:0097100 supercoiled DNA binding(GO:0097100)
0.0 0.4 GO:0035497 cAMP response element binding(GO:0035497)
0.0 0.1 GO:0033677 DNA/RNA helicase activity(GO:0033677)
0.0 0.7 GO:0001223 transcription coactivator binding(GO:0001223)
0.0 0.4 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.1 GO:0086006 voltage-gated sodium channel activity involved in cardiac muscle cell action potential(GO:0086006)
0.0 2.0 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 0.6 GO:0005154 epidermal growth factor receptor binding(GO:0005154)
0.0 0.1 GO:0001849 complement component C1q binding(GO:0001849)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.7 NABA BASEMENT MEMBRANES Genes encoding structural components of basement membranes
0.0 0.6 PID SYNDECAN 3 PATHWAY Syndecan-3-mediated signaling events
0.0 1.7 PID CASPASE PATHWAY Caspase cascade in apoptosis
0.0 0.3 PID TCR CALCIUM PATHWAY Calcium signaling in the CD4+ TCR pathway
0.0 0.6 PID ATR PATHWAY ATR signaling pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.6 REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN Genes involved in Platelet Adhesion to exposed collagen
0.0 0.6 REACTOME CDC6 ASSOCIATION WITH THE ORC ORIGIN COMPLEX Genes involved in CDC6 association with the ORC:origin complex
0.0 1.8 REACTOME APOPTOTIC CLEAVAGE OF CELLULAR PROTEINS Genes involved in Apoptotic cleavage of cellular proteins
0.0 0.4 REACTOME CONVERSION FROM APC C CDC20 TO APC C CDH1 IN LATE ANAPHASE Genes involved in Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase
0.0 0.1 REACTOME CREATION OF C4 AND C2 ACTIVATORS Genes involved in Creation of C4 and C2 activators