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PRJNA375882: Comprehensive Mouse Transcriptomic BodyMap

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Results for UAAGACU

Z-value: 0.28

Motif logo

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miRNA associated with seed UAAGACU

NamemiRBASE accession
mmu-miR-499-5p
MIMAT0003482

Activity profile of UAAGACU motif

Sorted Z-values of UAAGACU motif

Network of associatons between targets according to the STRING database.

First level regulatory network of UAAGACU

PNG image of the network

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Top targets:

Promoter Score Transcript Gene Gene Info
chr14_-_31299275 2.07 ENSMUST00000112027.9
Colq
collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
chr17_-_52139693 1.75 ENSMUST00000144331.8
Satb1
special AT-rich sequence binding protein 1
chr10_-_23225781 1.12 ENSMUST00000092665.12
Eya4
EYA transcriptional coactivator and phosphatase 4
chr5_+_108213608 1.01 ENSMUST00000081567.11
ENSMUST00000170319.8
ENSMUST00000112626.8
Mtf2
metal response element binding transcription factor 2
chr9_+_72439496 0.84 ENSMUST00000163401.9
ENSMUST00000093820.10
Rfx7
regulatory factor X, 7
chr12_-_107969853 0.82 ENSMUST00000066060.11
Bcl11b
B cell leukemia/lymphoma 11B
chr17_+_6869070 0.73 ENSMUST00000092966.5
Dynlt1c
dynein light chain Tctex-type 1C
chr12_-_73093953 0.59 ENSMUST00000050029.8
Six1
sine oculis-related homeobox 1
chr6_-_145811028 0.58 ENSMUST00000111703.2
Bhlhe41
basic helix-loop-helix family, member e41
chr17_-_6367692 0.57 ENSMUST00000232499.2
ENSMUST00000169415.3
Dynlt1a
dynein light chain Tctex-type 1A
chr2_-_37537224 0.56 ENSMUST00000028279.10
Strbp
spermatid perinuclear RNA binding protein
chr9_+_32607301 0.56 ENSMUST00000034534.13
ENSMUST00000050797.14
ENSMUST00000184887.2
Ets1
E26 avian leukemia oncogene 1, 5' domain
chr11_+_44508137 0.54 ENSMUST00000109268.2
ENSMUST00000101326.10
ENSMUST00000081265.12
Ebf1
early B cell factor 1
chr2_-_6889783 0.53 ENSMUST00000170438.8
ENSMUST00000114924.10
ENSMUST00000114934.11
Celf2
CUGBP, Elav-like family member 2
chr19_-_14575395 0.50 ENSMUST00000052011.15
ENSMUST00000167776.3
Tle4
transducin-like enhancer of split 4
chr11_-_86248395 0.46 ENSMUST00000043624.9
Med13
mediator complex subunit 13
chr17_-_6923299 0.43 ENSMUST00000179554.3
Dynlt1f
dynein light chain Tctex-type 1F
chr8_-_96215401 0.38 ENSMUST00000212214.2
ENSMUST00000056919.9
Csnk2a2
casein kinase 2, alpha prime polypeptide
chr1_+_74545203 0.38 ENSMUST00000087215.7
Cnot9
CCR4-NOT transcription complex, subunit 9
chr3_-_116217579 0.34 ENSMUST00000106491.7
ENSMUST00000090464.7
Cdc14a
CDC14 cell division cycle 14A
chr6_-_99643723 0.33 ENSMUST00000032151.3
Eif4e3
eukaryotic translation initiation factor 4E member 3
chr1_-_69724939 0.32 ENSMUST00000027146.9
Ikzf2
IKAROS family zinc finger 2
chr13_-_111626562 0.32 ENSMUST00000091236.11
ENSMUST00000047627.14
Gpbp1
GC-rich promoter binding protein 1
chr9_-_72019109 0.31 ENSMUST00000183404.8
ENSMUST00000184783.8
Tcf12
transcription factor 12
chr7_-_115637970 0.30 ENSMUST00000166877.8
Sox6
SRY (sex determining region Y)-box 6
chr13_-_43634695 0.29 ENSMUST00000144326.4
Ranbp9
RAN binding protein 9
chr13_-_56283331 0.29 ENSMUST00000045788.9
ENSMUST00000016081.13
Macroh2a1
macroH2A.1 histone
chr10_-_45346297 0.28 ENSMUST00000079390.7
Lin28b
lin-28 homolog B (C. elegans)
chr1_-_97589675 0.27 ENSMUST00000053033.14
ENSMUST00000149927.2
Macir
macrophage immunometabolism regulator
chr11_+_44409775 0.27 ENSMUST00000019333.10
Rnf145
ring finger protein 145
chr6_-_39183712 0.25 ENSMUST00000002305.9
Kdm7a
lysine (K)-specific demethylase 7A
chr1_-_22031718 0.25 ENSMUST00000029667.13
ENSMUST00000173058.8
ENSMUST00000173404.2
Kcnq5
potassium voltage-gated channel, subfamily Q, member 5
chr1_+_99700490 0.24 ENSMUST00000086738.10
Cntnap5b
contactin associated protein-like 5B
chr1_-_119765343 0.24 ENSMUST00000064091.12
Ptpn4
protein tyrosine phosphatase, non-receptor type 4
chr10_-_115151451 0.22 ENSMUST00000020343.9
ENSMUST00000218831.2
Rab21
RAB21, member RAS oncogene family
chr12_+_32428691 0.19 ENSMUST00000172332.4
Ccdc71l
coiled-coil domain containing 71 like
chr14_-_105414294 0.19 ENSMUST00000163545.8
Rbm26
RNA binding motif protein 26
chr4_+_137943603 0.19 ENSMUST00000105827.8
Hp1bp3
heterochromatin protein 1, binding protein 3
chr9_+_86349207 0.18 ENSMUST00000190957.7
Dop1a
DOP1 leucine zipper like protein A
chr3_+_94744844 0.18 ENSMUST00000107270.9
Pogz
pogo transposable element with ZNF domain
chr4_-_119151717 0.18 ENSMUST00000079644.13
Ybx1
Y box protein 1
chr6_-_100264439 0.18 ENSMUST00000101118.4
Rybp
RING1 and YY1 binding protein
chr4_-_126323291 0.18 ENSMUST00000069097.13
Ago3
argonaute RISC catalytic subunit 3
chr11_-_78588194 0.18 ENSMUST00000142739.8
Nlk
nemo like kinase
chr6_+_38410848 0.17 ENSMUST00000160583.8
Ubn2
ubinuclein 2
chr1_+_131755715 0.17 ENSMUST00000086559.7
Slc41a1
solute carrier family 41, member 1
chr14_-_20596580 0.16 ENSMUST00000022355.11
ENSMUST00000161445.8
ENSMUST00000159027.8
Ppp3cb
protein phosphatase 3, catalytic subunit, beta isoform
chr11_+_54329014 0.16 ENSMUST00000046835.14
Fnip1
folliculin interacting protein 1
chr19_+_41471067 0.15 ENSMUST00000067795.13
Lcor
ligand dependent nuclear receptor corepressor
chr4_-_41314877 0.14 ENSMUST00000030145.9
Dcaf12
DDB1 and CUL4 associated factor 12
chr4_+_140875222 0.14 ENSMUST00000030757.10
Fbxo42
F-box protein 42
chr16_-_76170714 0.14 ENSMUST00000231585.2
ENSMUST00000121927.8
Nrip1
nuclear receptor interacting protein 1
chr5_+_67765216 0.14 ENSMUST00000087241.7
Shisa3
shisa family member 3
chr3_-_119576911 0.13 ENSMUST00000197464.5
ENSMUST00000198403.2
ENSMUST00000029780.12
Ptbp2
polypyrimidine tract binding protein 2
chr12_-_91556761 0.13 ENSMUST00000021345.14
Gtf2a1
general transcription factor II A, 1
chr9_+_45029080 0.13 ENSMUST00000170998.9
ENSMUST00000093855.4
Scn2b
sodium channel, voltage-gated, type II, beta
chr7_-_66339319 0.12 ENSMUST00000124899.8
Asb7
ankyrin repeat and SOCS box-containing 7
chr16_+_17051423 0.11 ENSMUST00000090190.14
ENSMUST00000232082.2
ENSMUST00000232426.2
Hic2
Gm49573
hypermethylated in cancer 2
predicted gene, 49573
chr1_+_43973167 0.11 ENSMUST00000087933.10
ENSMUST00000188313.7
Tpp2
tripeptidyl peptidase II
chr18_+_36414122 0.10 ENSMUST00000051301.6
Pura
purine rich element binding protein A
chr2_+_121859025 0.10 ENSMUST00000028668.8
Eif3j1
eukaryotic translation initiation factor 3, subunit J1
chr10_-_118705029 0.10 ENSMUST00000004281.10
Dyrk2
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
chr3_+_109247938 0.09 ENSMUST00000046864.14
Vav3
vav 3 oncogene
chr11_-_82719850 0.08 ENSMUST00000021036.13
ENSMUST00000074515.11
ENSMUST00000103218.3
Rffl
ring finger and FYVE like domain containing protein
chr13_-_48779072 0.07 ENSMUST00000035824.11
Ptpdc1
protein tyrosine phosphatase domain containing 1
chr11_+_97306353 0.07 ENSMUST00000121799.8
Arhgap23
Rho GTPase activating protein 23
chr11_-_66416790 0.06 ENSMUST00000066679.7
Shisa6
shisa family member 6
chr17_+_29768757 0.06 ENSMUST00000048677.9
ENSMUST00000150388.3
Tbc1d22b
Gm28052
TBC1 domain family, member 22B
predicted gene, 28052
chr4_+_123798625 0.05 ENSMUST00000030400.14
Mycbp
MYC binding protein
chr8_+_91555449 0.05 ENSMUST00000109614.9
Chd9
chromodomain helicase DNA binding protein 9
chr4_+_5644090 0.03 ENSMUST00000054857.13
Fam110b
family with sequence similarity 110, member B
chr12_+_49429574 0.02 ENSMUST00000179669.3
Foxg1
forkhead box G1
chr8_-_94739469 0.02 ENSMUST00000053766.14
Amfr
autocrine motility factor receptor
chr1_-_9818601 0.01 ENSMUST00000057438.7
Vcpip1
valosin containing protein (p97)/p47 complex interacting protein 1
chr7_+_48896560 0.01 ENSMUST00000184945.8
Nav2
neuron navigator 2
chr18_+_53309388 0.01 ENSMUST00000037850.7
Snx2
sorting nexin 2
chr15_-_93173032 0.01 ENSMUST00000057896.5
ENSMUST00000049484.13
ENSMUST00000230063.2
Gxylt1
glucoside xylosyltransferase 1

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.7 GO:0008582 regulation of synaptic growth at neuromuscular junction(GO:0008582)
0.3 0.8 GO:0097534 lymphoid lineage cell migration(GO:0097534) lymphoid lineage cell migration into thymus(GO:0097535)
0.2 1.0 GO:0061086 negative regulation of histone H3-K27 methylation(GO:0061086)
0.1 1.8 GO:0043374 CD8-positive, alpha-beta T cell differentiation(GO:0043374)
0.1 1.1 GO:0016576 histone dephosphorylation(GO:0016576)
0.1 0.3 GO:0035574 histone H4-K20 demethylation(GO:0035574)
0.1 0.4 GO:2000327 regulation of ligand-dependent nuclear receptor transcription coactivator activity(GO:2000325) positive regulation of ligand-dependent nuclear receptor transcription coactivator activity(GO:2000327)
0.1 0.6 GO:1904996 PML body organization(GO:0030578) positive regulation of leukocyte adhesion to vascular endothelial cell(GO:1904996)
0.0 0.3 GO:0010587 miRNA catabolic process(GO:0010587)
0.0 0.2 GO:0097298 regulation of nucleus size(GO:0097298)
0.0 0.2 GO:0070934 CRD-mediated mRNA stabilization(GO:0070934)
0.0 0.1 GO:0001543 ovarian follicle rupture(GO:0001543)
0.0 0.6 GO:0010944 negative regulation of transcription by competitive promoter binding(GO:0010944)
0.0 0.3 GO:0051256 mitotic spindle midzone assembly(GO:0051256)
0.0 0.3 GO:2000741 positive regulation of mesenchymal stem cell differentiation(GO:2000741)
0.0 0.2 GO:0001915 negative regulation of T cell mediated cytotoxicity(GO:0001915)
0.0 0.1 GO:0046684 response to pyrethroid(GO:0046684)
0.0 0.2 GO:0010961 cellular magnesium ion homeostasis(GO:0010961)
0.0 0.1 GO:2001271 negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis(GO:2001271)
0.0 0.2 GO:0035280 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280)
0.0 0.2 GO:0002904 positive regulation of B cell apoptotic process(GO:0002904)
0.0 0.2 GO:2000643 positive regulation of early endosome to late endosome transport(GO:2000643)
0.0 0.7 GO:0006376 mRNA splice site selection(GO:0006376)
0.0 0.1 GO:0051534 negative regulation of NFAT protein import into nucleus(GO:0051534)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.1 0.2 GO:0098559 cytoplasmic side of early endosome membrane(GO:0098559)
0.1 1.7 GO:0005868 cytoplasmic dynein complex(GO:0005868)
0.0 0.4 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.0 1.0 GO:0035098 ESC/E(Z) complex(GO:0035098)
0.0 0.2 GO:0070937 CRD-mediated mRNA stability complex(GO:0070937)
0.0 0.2 GO:0005955 calcineurin complex(GO:0005955)
0.0 0.1 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.0 1.8 GO:0005720 nuclear heterochromatin(GO:0005720)
0.0 0.2 GO:0035068 micro-ribonucleoprotein complex(GO:0035068)
0.0 1.8 GO:0005581 collagen trimer(GO:0005581)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 GO:0071820 N-box binding(GO:0071820)
0.1 0.3 GO:0035575 histone demethylase activity (H4-K20 specific)(GO:0035575)
0.0 0.2 GO:0004726 non-membrane spanning protein tyrosine phosphatase activity(GO:0004726)
0.0 0.2 GO:0033192 calmodulin-dependent protein phosphatase activity(GO:0033192)
0.0 0.5 GO:0070742 C2H2 zinc finger domain binding(GO:0070742)
0.0 0.1 GO:0008240 tripeptidyl-peptidase activity(GO:0008240)
0.0 0.6 GO:0001223 transcription coactivator binding(GO:0001223)
0.0 0.1 GO:0086006 voltage-gated sodium channel activity involved in cardiac muscle cell action potential(GO:0086006)
0.0 0.3 GO:0035497 cAMP response element binding(GO:0035497)
0.0 1.0 GO:0035064 methylated histone binding(GO:0035064)
0.0 0.7 GO:0036002 pre-mRNA binding(GO:0036002)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.8 NABA BASEMENT MEMBRANES Genes encoding structural components of basement membranes
0.0 1.5 PID CASPASE PATHWAY Caspase cascade in apoptosis
0.0 0.4 PID DNA PK PATHWAY DNA-PK pathway in nonhomologous end joining
0.0 0.6 PID HIF2PATHWAY HIF-2-alpha transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.7 REACTOME APOPTOTIC CLEAVAGE OF CELLULAR PROTEINS Genes involved in Apoptotic cleavage of cellular proteins
0.0 0.3 REACTOME CONVERSION FROM APC C CDC20 TO APC C CDH1 IN LATE ANAPHASE Genes involved in Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase
0.0 0.6 REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression