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PRJNA375882: Comprehensive Mouse Transcriptomic BodyMap

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Results for UGACCUA

Z-value: 0.16

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miRNA associated with seed UGACCUA

NamemiRBASE accession
mmu-miR-192-5p
MIMAT0000517
mmu-miR-215-5p
MIMAT0000904

Activity profile of UGACCUA motif

Sorted Z-values of UGACCUA motif

Network of associatons between targets according to the STRING database.

First level regulatory network of UGACCUA

PNG image of the network

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Top targets:

Promoter Score Transcript Gene Gene Info
chr13_-_37234213 0.33 ENSMUST00000164727.8
F13a1
coagulation factor XIII, A1 subunit
chr12_-_26506422 0.29 ENSMUST00000020970.10
Rsad2
radical S-adenosyl methionine domain containing 2
chrX_+_95139639 0.27 ENSMUST00000117399.2
Msn
moesin
chr4_+_123176570 0.25 ENSMUST00000106243.8
ENSMUST00000106241.8
ENSMUST00000080178.13
Pabpc4
poly(A) binding protein, cytoplasmic 4
chr10_+_87695117 0.24 ENSMUST00000105300.9
Igf1
insulin-like growth factor 1
chr13_+_111822712 0.21 ENSMUST00000109272.9
Mier3
MIER family member 3
chr5_-_136596299 0.19 ENSMUST00000004097.16
Cux1
cut-like homeobox 1
chr5_+_73808718 0.19 ENSMUST00000071077.14
Spata18
spermatogenesis associated 18
chrX_-_163041185 0.18 ENSMUST00000112265.9
Bmx
BMX non-receptor tyrosine kinase
chrX_+_105964224 0.17 ENSMUST00000060576.8
Lpar4
lysophosphatidic acid receptor 4
chr2_+_27776428 0.16 ENSMUST00000028280.14
Col5a1
collagen, type V, alpha 1
chr4_-_96673423 0.16 ENSMUST00000107071.2
Gm12695
predicted gene 12695
chr1_-_54965470 0.15 ENSMUST00000179030.8
ENSMUST00000044359.16
Ankrd44
ankyrin repeat domain 44
chr19_+_27194757 0.15 ENSMUST00000047645.13
ENSMUST00000167487.8
Vldlr
very low density lipoprotein receptor
chr3_-_27764571 0.15 ENSMUST00000046157.10
Fndc3b
fibronectin type III domain containing 3B
chr4_+_8691303 0.14 ENSMUST00000051558.10
Chd7
chromodomain helicase DNA binding protein 7
chr2_-_45003270 0.13 ENSMUST00000202935.4
ENSMUST00000068415.11
ENSMUST00000127520.8
Zeb2
zinc finger E-box binding homeobox 2
chr9_-_56835633 0.13 ENSMUST00000050916.7
Snx33
sorting nexin 33
chr19_-_41790458 0.13 ENSMUST00000026150.15
ENSMUST00000163265.9
ENSMUST00000177495.2
Arhgap19
Rho GTPase activating protein 19
chr11_+_98798627 0.13 ENSMUST00000092706.13
Cdc6
cell division cycle 6
chr6_+_100681670 0.13 ENSMUST00000032157.9
Gxylt2
glucoside xylosyltransferase 2
chr7_+_49559859 0.13 ENSMUST00000056442.12
Slc6a5
solute carrier family 6 (neurotransmitter transporter, glycine), member 5
chr1_-_135032972 0.13 ENSMUST00000044828.14
Lgr6
leucine-rich repeat-containing G protein-coupled receptor 6
chr10_-_31485180 0.12 ENSMUST00000081989.8
Rnf217
ring finger protein 217
chr2_-_33321306 0.12 ENSMUST00000113158.8
Zbtb34
zinc finger and BTB domain containing 34
chr12_+_24881582 0.12 ENSMUST00000221952.2
ENSMUST00000078902.8
ENSMUST00000110942.11
Mboat2
membrane bound O-acyltransferase domain containing 2
chr10_-_53252210 0.11 ENSMUST00000095691.7
Cep85l
centrosomal protein 85-like
chr15_-_8473918 0.11 ENSMUST00000052965.8
Nipbl
NIPBL cohesin loading factor
chr1_-_151965876 0.10 ENSMUST00000044581.14
1700025G04Rik
RIKEN cDNA 1700025G04 gene
chr2_-_178056251 0.10 ENSMUST00000058678.5
Ppp1r3d
protein phosphatase 1, regulatory subunit 3D
chr6_+_145156860 0.10 ENSMUST00000111725.8
ENSMUST00000111726.10
ENSMUST00000039729.5
ENSMUST00000111723.8
ENSMUST00000111724.8
ENSMUST00000111721.2
ENSMUST00000111719.2
Etfrf1
electron transfer flavoprotein regulatory factor 1
chrX_+_23559282 0.09 ENSMUST00000035766.13
ENSMUST00000101670.3
Wdr44
WD repeat domain 44
chr9_+_35332837 0.09 ENSMUST00000119129.10
Cdon
cell adhesion molecule-related/down-regulated by oncogenes
chr2_+_162773440 0.09 ENSMUST00000130411.7
ENSMUST00000126163.3
Srsf6
serine and arginine-rich splicing factor 6
chr6_-_120015608 0.09 ENSMUST00000177761.8
ENSMUST00000088644.13
ENSMUST00000060043.13
Wnk1
WNK lysine deficient protein kinase 1
chr6_-_97594498 0.09 ENSMUST00000113355.9
Frmd4b
FERM domain containing 4B
chr9_-_44145280 0.08 ENSMUST00000205968.2
ENSMUST00000206147.2
ENSMUST00000037644.8
Cbl
Casitas B-lineage lymphoma
chr1_+_60219724 0.08 ENSMUST00000160834.8
Nbeal1
neurobeachin like 1
chr10_-_10348058 0.08 ENSMUST00000179956.8
ENSMUST00000208717.2
ENSMUST00000172530.8
ENSMUST00000132573.2
Adgb
androglobin
chr5_+_91222470 0.08 ENSMUST00000031324.6
Ereg
epiregulin
chr18_-_38068456 0.07 ENSMUST00000080033.7
ENSMUST00000115631.8
ENSMUST00000115634.8
Diaph1
diaphanous related formin 1
chr10_+_19232281 0.06 ENSMUST00000053225.7
Olig3
oligodendrocyte transcription factor 3
chr5_+_32616187 0.06 ENSMUST00000015100.15
Ppp1cb
protein phosphatase 1 catalytic subunit beta
chr15_+_6737853 0.06 ENSMUST00000061656.8
Rictor
RPTOR independent companion of MTOR, complex 2
chrX_-_94488394 0.06 ENSMUST00000084535.6
Amer1
APC membrane recruitment 1
chr16_+_35803674 0.06 ENSMUST00000004054.13
Kpna1
karyopherin (importin) alpha 1
chr10_-_39009844 0.05 ENSMUST00000134279.8
ENSMUST00000139743.8
ENSMUST00000149949.8
ENSMUST00000124941.8
ENSMUST00000125042.8
ENSMUST00000063204.9
Fam229b
family with sequence similarity 229, member B
chr6_+_65019574 0.05 ENSMUST00000031984.9
ENSMUST00000205118.3
Smarcad1
SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr3_-_69034425 0.04 ENSMUST00000194558.6
ENSMUST00000029353.9
Kpna4
karyopherin (importin) alpha 4
chr5_+_72805122 0.04 ENSMUST00000087212.8
Nipal1
NIPA-like domain containing 1
chr16_+_91855158 0.04 ENSMUST00000047429.9
ENSMUST00000232677.2
ENSMUST00000113975.3
Mrps6
Gm49711
Slc5a3
mitochondrial ribosomal protein S6
predicted gene, 49711
solute carrier family 5 (inositol transporters), member 3
chr5_+_107745562 0.04 ENSMUST00000112651.8
ENSMUST00000112654.8
ENSMUST00000065422.12
Rpap2
RNA polymerase II associated protein 2
chr1_-_131066004 0.04 ENSMUST00000016670.9
Dyrk3
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3
chr15_-_35155896 0.04 ENSMUST00000067033.8
ENSMUST00000018476.14
Stk3
serine/threonine kinase 3
chr4_+_83443777 0.03 ENSMUST00000053414.13
ENSMUST00000231339.2
ENSMUST00000126429.8
Ccdc171
coiled-coil domain containing 171
chr9_-_50657800 0.02 ENSMUST00000239417.2
ENSMUST00000034564.4
2310030G06Rik
RIKEN cDNA 2310030G06 gene
chr3_+_116306719 0.02 ENSMUST00000000349.11
ENSMUST00000197201.5
Dbt
dihydrolipoamide branched chain transacylase E2
chr2_+_69652714 0.02 ENSMUST00000053087.4
Klhl23
kelch-like 23
chr3_-_41037427 0.02 ENSMUST00000058578.8
Pgrmc2
progesterone receptor membrane component 2
chr5_+_88702307 0.01 ENSMUST00000090413.6
Utp3
UTP3 small subunit processome component
chrX_-_47123719 0.01 ENSMUST00000039026.8
Apln
apelin
chr1_-_10302895 0.01 ENSMUST00000088615.11
ENSMUST00000131556.2
Arfgef1
ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)
chr14_-_73563212 0.01 ENSMUST00000022701.7
Rb1
RB transcriptional corepressor 1

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0034165 positive regulation of toll-like receptor 9 signaling pathway(GO:0034165)
0.0 0.2 GO:1903225 negative regulation of endodermal cell differentiation(GO:1903225)
0.0 0.2 GO:1904073 regulation of trophectodermal cell proliferation(GO:1904073) positive regulation of trophectodermal cell proliferation(GO:1904075)
0.0 0.1 GO:0003221 right ventricular cardiac muscle tissue morphogenesis(GO:0003221)
0.0 0.3 GO:1902965 regulation of protein localization to early endosome(GO:1902965) positive regulation of protein localization to early endosome(GO:1902966)
0.0 0.1 GO:0036233 glycine import(GO:0036233)
0.0 0.2 GO:0035694 mitochondrial protein catabolic process(GO:0035694)
0.0 0.2 GO:0034436 glycoprotein transport(GO:0034436)
0.0 0.3 GO:0072378 blood coagulation, fibrin clot formation(GO:0072378)
0.0 0.1 GO:1902748 positive regulation of lens fiber cell differentiation(GO:1902748)
0.0 0.1 GO:0016266 O-glycan processing(GO:0016266)
0.0 0.1 GO:0023016 signal transduction by trans-phosphorylation(GO:0023016)
0.0 0.1 GO:0036089 cleavage furrow formation(GO:0036089)
0.0 0.1 GO:0061010 gall bladder development(GO:0061010)
0.0 0.1 GO:0001550 ovarian cumulus expansion(GO:0001550) fused antrum stage(GO:0048165)
0.0 0.2 GO:0005981 regulation of glycogen catabolic process(GO:0005981)
0.0 0.1 GO:0097476 spinal cord motor neuron migration(GO:0097476)
0.0 0.1 GO:0060510 Type II pneumocyte differentiation(GO:0060510)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0005588 collagen type V trimer(GO:0005588)
0.0 0.2 GO:0042567 insulin-like growth factor ternary complex(GO:0042567)
0.0 0.3 GO:0001931 uropod(GO:0001931) cell trailing edge(GO:0031254)
0.0 0.2 GO:0042587 glycogen granule(GO:0042587)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0034189 very-low-density lipoprotein particle binding(GO:0034189)
0.0 0.3 GO:0003810 protein-glutamine gamma-glutamyltransferase activity(GO:0003810)
0.0 0.1 GO:0036033 mediator complex binding(GO:0036033)
0.0 0.2 GO:0070915 lysophosphatidic acid receptor activity(GO:0070915)
0.0 0.1 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.0 0.1 GO:0047184 1-acylglycerophosphocholine O-acyltransferase activity(GO:0047184)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 REACTOME COMMON PATHWAY Genes involved in Common Pathway