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PRJNA375882: Comprehensive Mouse Transcriptomic BodyMap

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Results for UGCAGUC

Z-value: 0.35

Motif logo

miRNA associated with seed UGCAGUC

NamemiRBASE accession
MIMAT0003459

Activity profile of UGCAGUC motif

Sorted Z-values of UGCAGUC motif

Network of associatons between targets according to the STRING database.

First level regulatory network of UGCAGUC

PNG image of the network

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Promoter Score Transcript Gene Gene Info
chr5_-_108697857 3.49 ENSMUST00000129040.2
ENSMUST00000046892.10
complexin 1
chr2_+_49509288 2.77 ENSMUST00000028102.14
kinesin family member 5C
chr12_-_11486544 2.32 ENSMUST00000072299.7
visinin-like 1
chr17_-_24908874 2.13 ENSMUST00000007236.5
synaptogyrin 3
chr4_+_102617495 1.78 ENSMUST00000072481.12
ENSMUST00000156596.8
ENSMUST00000080728.13
ENSMUST00000106882.9
SH3-domain GRB2-like (endophilin) interacting protein 1
chr11_-_6015736 1.66 ENSMUST00000002817.12
ENSMUST00000109813.9
ENSMUST00000090443.10
calcium/calmodulin-dependent protein kinase II, beta
chr6_+_21215472 1.60 ENSMUST00000081542.6
potassium voltage-gated channel, Shal-related family, member 2
chr12_+_108300599 1.56 ENSMUST00000021684.6
cytochrome P450, family 46, subfamily a, polypeptide 1
chr10_+_112107026 1.53 ENSMUST00000219301.2
ENSMUST00000092175.4
potassium voltage gated channel, Shaw-related subfamily, member 2
chr6_+_86826470 1.40 ENSMUST00000089519.13
ENSMUST00000204414.3
AP2 associated kinase 1
chr13_-_14697770 1.38 ENSMUST00000110516.3
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
chr18_-_32082624 1.37 ENSMUST00000064016.6
G protein-coupled receptor 17
chr12_+_29578354 1.12 ENSMUST00000218583.2
ENSMUST00000049784.17
myelin transcription factor 1-like
chr11_+_109376432 1.10 ENSMUST00000106697.8
arylsulfatase G
chr12_-_75224099 1.07 ENSMUST00000042299.4
potassium voltage-gated channel, subfamily H (eag-related), member 5
chr4_+_107659474 0.99 ENSMUST00000106733.10
ENSMUST00000238651.2
ENSMUST00000030356.10
ENSMUST00000238421.2
ENSMUST00000126573.8
ENSMUST00000238569.2
ENSMUST00000106732.10
low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chrX_-_74621828 0.96 ENSMUST00000033545.6
RAB39B, member RAS oncogene family
chr11_-_118800314 0.94 ENSMUST00000117731.8
ENSMUST00000106278.9
ENSMUST00000120061.8
ENSMUST00000017576.11
RNA binding protein, fox-1 homolog (C. elegans) 3
chr11_-_119438569 0.93 ENSMUST00000026670.5
neuronal pentraxin 1
chr13_-_99653045 0.86 ENSMUST00000064762.6
microtubule-associated protein 1B
chr15_-_48655329 0.84 ENSMUST00000160658.8
ENSMUST00000100670.10
ENSMUST00000162830.8
CUB and Sushi multiple domains 3
chr3_+_33853941 0.79 ENSMUST00000099153.10
tetratricopeptide repeat domain 14
chr17_-_27784640 0.78 ENSMUST00000232276.2
ENSMUST00000145183.3
ENSMUST00000232203.2
ENSMUST00000231753.2
ENSMUST00000154473.9
expressed sequence AI413582
chr17_+_44114894 0.77 ENSMUST00000044895.13
regulator of calcineurin 2
chr2_-_5719302 0.75 ENSMUST00000044009.14
calcium/calmodulin-dependent protein kinase ID
chr19_-_18978463 0.75 ENSMUST00000040153.15
ENSMUST00000112828.8
RAR-related orphan receptor beta
chr11_-_97886997 0.70 ENSMUST00000042971.16
ADP-ribosylation factor-like 5C
chr4_-_22488296 0.68 ENSMUST00000178174.3
POU domain, class 3, transcription factor 2
chr13_+_54519161 0.68 ENSMUST00000026985.9
complexin 2
chr1_+_42734889 0.64 ENSMUST00000054883.4
POU domain, class 3, transcription factor 3
chr10_+_52566616 0.64 ENSMUST00000105473.3
solute carrier family 35, member F1
chr7_-_81104423 0.63 ENSMUST00000178892.3
ENSMUST00000098331.10
cytoplasmic polyadenylation element binding protein 1
chr16_+_80997580 0.62 ENSMUST00000037785.14
ENSMUST00000067602.5
neural cell adhesion molecule 2
chr14_-_20596580 0.62 ENSMUST00000022355.11
ENSMUST00000161445.8
ENSMUST00000159027.8
protein phosphatase 3, catalytic subunit, beta isoform
chr11_+_68582731 0.58 ENSMUST00000102611.10
myosin, heavy polypeptide 10, non-muscle
chr11_+_62172283 0.58 ENSMUST00000101075.11
ENSMUST00000050646.13
tetratricopeptide repeat domain 19
chr10_-_84276454 0.57 ENSMUST00000020220.15
NUAK family, SNF1-like kinase, 1
chr11_+_62465304 0.55 ENSMUST00000018651.14
transient receptor potential cation channel, subfamily V, member 2
chr6_-_56774622 0.52 ENSMUST00000114323.8
kelch repeat and BTB (POZ) domain containing 2
chr5_-_23821523 0.46 ENSMUST00000088392.9
serine/arginine-rich protein specific kinase 2
chr14_+_34542053 0.44 ENSMUST00000043349.7
glutamate receptor, ionotropic, delta 1
chr8_+_85763534 0.43 ENSMUST00000093360.12
transportin 2 (importin 3, karyopherin beta 2b)
chr11_-_106050927 0.42 ENSMUST00000045923.10
LIM domain containing 2
chr3_+_138231935 0.42 ENSMUST00000029803.12
eukaryotic translation initiation factor 4E
chr3_+_102377234 0.42 ENSMUST00000035952.5
ENSMUST00000198168.5
ENSMUST00000106925.9
nerve growth factor
chr6_+_116241146 0.39 ENSMUST00000112900.9
ENSMUST00000036503.14
ENSMUST00000223495.2
zinc finger, AN1-type domain 4
chr2_+_181405106 0.38 ENSMUST00000081125.11
myelin transcription factor 1
chr8_-_61436249 0.38 ENSMUST00000004430.14
ENSMUST00000110301.2
ENSMUST00000093490.9
chloride channel, voltage-sensitive 3
chr19_-_37184692 0.37 ENSMUST00000132580.8
ENSMUST00000079754.11
ENSMUST00000136286.8
ENSMUST00000126188.8
ENSMUST00000126781.2
cytoplasmic polyadenylation element binding protein 3
chr2_+_130748380 0.37 ENSMUST00000028781.9
attractin
chr5_+_73164226 0.36 ENSMUST00000031127.11
ENSMUST00000201304.2
solute carrier family 10 (sodium/bile acid cotransporter family), member 4
chr12_+_111132779 0.36 ENSMUST00000117269.8
TNF receptor-associated factor 3
chr2_-_68302612 0.35 ENSMUST00000102715.4
serine/threonine kinase 39
chr11_+_58221538 0.34 ENSMUST00000116376.9
SH3 binding domain protein 5 like
chr12_+_81678143 0.33 ENSMUST00000036116.6
tetratricopeptide repeat domain 9
chr3_-_143910926 0.33 ENSMUST00000120539.8
ENSMUST00000196264.5
LIM domain only 4
chr10_+_82821304 0.29 ENSMUST00000040110.8
carbohydrate sulfotransferase 11
chr11_-_102446947 0.23 ENSMUST00000143842.2
G patch domain containing 8
chr11_+_75623695 0.21 ENSMUST00000067664.10
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
chr2_-_48839276 0.21 ENSMUST00000028098.11
origin recognition complex, subunit 4
chr7_+_100256617 0.17 ENSMUST00000107048.8
ENSMUST00000032946.10
RAB6A, member RAS oncogene family
chr16_-_32065972 0.17 ENSMUST00000042732.6
F-box protein 45
chr16_-_4867703 0.16 ENSMUST00000115844.3
ENSMUST00000023189.15
glyoxylate reductase 1 homolog (Arabidopsis)
chr2_+_120807498 0.15 ENSMUST00000067582.14
transmembrane protein 62
chr19_+_58931847 0.12 ENSMUST00000054280.10
ENSMUST00000200910.4
enolase 4
chr2_-_120801186 0.12 ENSMUST00000028728.6
ubiquitin protein ligase E3 component n-recognin 1
chr3_-_108352499 0.12 ENSMUST00000090553.12
ENSMUST00000153499.2
seryl-aminoacyl-tRNA synthetase
chr4_+_137720326 0.11 ENSMUST00000139759.8
ENSMUST00000058133.10
ENSMUST00000105830.9
ENSMUST00000084215.12
eukaryotic translation initiation factor 4 gamma, 3
chr5_-_115439016 0.10 ENSMUST00000009157.4
dynein light chain LC8-type 1
chr2_-_34645241 0.10 ENSMUST00000102800.9
GTPase activating protein and VPS9 domains 1
chr5_-_121974913 0.09 ENSMUST00000040308.14
ENSMUST00000086310.8
SH2B adaptor protein 3
chr17_+_8384333 0.09 ENSMUST00000097419.10
ENSMUST00000024636.15
centrosomal protein 43
chr13_+_35059285 0.09 ENSMUST00000077853.5
pre-mRNA processing factor 4B
chr5_-_3852857 0.08 ENSMUST00000043551.11
ankyrin repeat and IBR domain containing 1
chr5_-_92231314 0.08 ENSMUST00000169094.8
ENSMUST00000167918.8
GTPase activating protein (SH3 domain) binding protein 2
chr19_+_59446804 0.08 ENSMUST00000062216.4
empty spiracles homeobox 2
chr16_+_35803674 0.06 ENSMUST00000004054.13
karyopherin (importin) alpha 1
chr14_-_61677258 0.06 ENSMUST00000022496.9
karyopherin (importin) alpha 3
chr14_-_47805861 0.05 ENSMUST00000228784.2
ENSMUST00000042988.7
autophagy related 14
chr19_-_46384158 0.02 ENSMUST00000237742.2
ENSMUST00000040270.6
ARP1 actin-related protein 1A, centractin alpha
chr3_+_137770813 0.02 ENSMUST00000163080.3
RIKEN cDNA 1110002E22 gene
chr11_-_115918784 0.01 ENSMUST00000106454.8
H3.3 histone B
chr15_-_97902576 0.00 ENSMUST00000023123.15
collagen, type II, alpha 1
chr10_+_12966532 0.00 ENSMUST00000121646.8
ENSMUST00000121325.8
ENSMUST00000121766.8
pleiomorphic adenoma gene-like 1

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.8 GO:0098963 dendritic transport of ribonucleoprotein complex(GO:0098961) dendritic transport of messenger ribonucleoprotein complex(GO:0098963) anterograde dendritic transport of messenger ribonucleoprotein complex(GO:0098964)
0.6 1.7 GO:0060466 activation of meiosis involved in egg activation(GO:0060466)
0.5 1.5 GO:0038060 nitric oxide-cGMP-mediated signaling pathway(GO:0038060)
0.2 1.1 GO:0000160 phosphorelay signal transduction system(GO:0000160)
0.2 0.6 GO:0072023 ascending thin limb development(GO:0072021) thick ascending limb development(GO:0072023) metanephric ascending thin limb development(GO:0072218) metanephric thick ascending limb development(GO:0072233)
0.1 0.6 GO:0070650 actin filament bundle distribution(GO:0070650)
0.1 0.9 GO:0035865 response to potassium ion(GO:0035864) cellular response to potassium ion(GO:0035865)
0.1 0.4 GO:0097401 synaptic vesicle lumen acidification(GO:0097401)
0.1 0.4 GO:1900247 cytoplasmic translational elongation(GO:0002182) regulation of cytoplasmic translational elongation(GO:1900247) negative regulation of cytoplasmic translational elongation(GO:1900248)
0.1 0.3 GO:2000686 regulation of rubidium ion transmembrane transporter activity(GO:2000686)
0.1 1.8 GO:2000507 positive regulation of energy homeostasis(GO:2000507)
0.1 1.0 GO:0038026 reelin-mediated signaling pathway(GO:0038026)
0.1 0.6 GO:0001915 negative regulation of T cell mediated cytotoxicity(GO:0001915)
0.1 1.6 GO:0016127 cholesterol catabolic process(GO:0006707) sterol catabolic process(GO:0016127)
0.1 0.6 GO:2000766 negative regulation of cytoplasmic translation(GO:2000766)
0.1 0.5 GO:0035063 nuclear speck organization(GO:0035063)
0.1 0.8 GO:0060267 positive regulation of respiratory burst(GO:0060267)
0.1 0.4 GO:0014042 positive regulation of neuron maturation(GO:0014042)
0.1 1.4 GO:0002862 negative regulation of inflammatory response to antigenic stimulus(GO:0002862)
0.1 0.7 GO:0021869 forebrain ventricular zone progenitor cell division(GO:0021869)
0.1 0.2 GO:1902309 negative regulation of peptidyl-serine dephosphorylation(GO:1902309)
0.0 0.7 GO:0046549 retinal cone cell development(GO:0046549)
0.0 0.6 GO:0017062 respiratory chain complex III assembly(GO:0017062) mitochondrial respiratory chain complex III assembly(GO:0034551)
0.0 2.4 GO:0035774 positive regulation of insulin secretion involved in cellular response to glucose stimulus(GO:0035774)
0.0 0.3 GO:0021514 ventral spinal cord interneuron differentiation(GO:0021514)
0.0 0.7 GO:0031915 positive regulation of synaptic plasticity(GO:0031915)
0.0 0.5 GO:0035507 regulation of myosin-light-chain-phosphatase activity(GO:0035507)
0.0 0.8 GO:0061162 establishment of monopolar cell polarity(GO:0061162)
0.0 0.1 GO:0006434 seryl-tRNA aminoacylation(GO:0006434)
0.0 0.4 GO:0006610 ribosomal protein import into nucleus(GO:0006610)
0.0 0.2 GO:0018125 peptidyl-cysteine methylation(GO:0018125)
0.0 1.4 GO:2000369 regulation of clathrin-mediated endocytosis(GO:2000369)
0.0 1.2 GO:0045475 locomotor rhythm(GO:0045475)
0.0 0.4 GO:0008063 Toll signaling pathway(GO:0008063)
0.0 0.1 GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
0.0 0.8 GO:0031987 locomotion involved in locomotory behavior(GO:0031987)
0.0 2.9 GO:0016079 synaptic vesicle exocytosis(GO:0016079)
0.0 0.3 GO:0030206 chondroitin sulfate biosynthetic process(GO:0030206)
0.0 1.1 GO:0048665 neuron fate specification(GO:0048665)
0.0 0.1 GO:0016240 autophagosome docking(GO:0016240)
0.0 0.2 GO:0021960 anterior commissure morphogenesis(GO:0021960)
0.0 0.4 GO:0060539 diaphragm development(GO:0060539)
0.0 0.4 GO:0071549 cellular response to dexamethasone stimulus(GO:0071549)
0.0 2.1 GO:0032411 positive regulation of transporter activity(GO:0032411)
0.0 0.4 GO:0015721 bile acid and bile salt transport(GO:0015721)
0.0 0.1 GO:0060903 positive regulation of meiosis I(GO:0060903)
0.0 0.1 GO:0099527 postsynapse to nucleus signaling pathway(GO:0099527)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 3.5 GO:0070032 synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex(GO:0070032)
0.7 0.7 GO:0070033 synaptobrevin 2-SNAP-25-syntaxin-1a-complexin II complex(GO:0070033)
0.1 2.8 GO:0035253 ciliary rootlet(GO:0035253)
0.1 1.3 GO:0071439 clathrin complex(GO:0071439)
0.1 0.6 GO:0005955 calcineurin complex(GO:0005955)
0.1 0.2 GO:0070381 endosome to plasma membrane transport vesicle(GO:0070381)
0.1 1.8 GO:0030122 AP-2 adaptor complex(GO:0030122)
0.1 0.6 GO:0097513 myosin II filament(GO:0097513)
0.1 3.1 GO:0032809 neuronal cell body membrane(GO:0032809)
0.1 0.6 GO:0072687 meiotic spindle(GO:0072687)
0.0 0.5 GO:0032584 growth cone membrane(GO:0032584)
0.0 1.7 GO:0051233 spindle midzone(GO:0051233)
0.0 0.4 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.0 0.9 GO:0043196 varicosity(GO:0043196)
0.0 2.1 GO:0030672 synaptic vesicle membrane(GO:0030672) exocytic vesicle membrane(GO:0099501)
0.0 0.4 GO:0035631 CD40 receptor complex(GO:0035631)
0.0 0.2 GO:0000808 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.0 0.1 GO:0097632 extrinsic component of pre-autophagosomal structure membrane(GO:0097632)
0.0 0.4 GO:0042581 specific granule(GO:0042581)
0.0 0.4 GO:0030014 CCR4-NOT complex(GO:0030014)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.8 GO:0034190 apolipoprotein receptor binding(GO:0034190)
0.3 1.6 GO:0005250 A-type (transient outward) potassium channel activity(GO:0005250)
0.2 1.0 GO:0038025 reelin receptor activity(GO:0038025)
0.2 1.1 GO:0000155 phosphorelay sensor kinase activity(GO:0000155)
0.1 0.7 GO:0008502 melatonin receptor activity(GO:0008502)
0.1 0.4 GO:0031370 eukaryotic initiation factor 4G binding(GO:0031370)
0.1 4.2 GO:0017075 syntaxin-1 binding(GO:0017075)
0.1 0.4 GO:0030297 transmembrane receptor protein tyrosine kinase activator activity(GO:0030297)
0.1 0.6 GO:0033192 calmodulin-dependent protein phosphatase activity(GO:0033192)
0.1 0.3 GO:0047756 chondroitin 4-sulfotransferase activity(GO:0047756)
0.1 0.9 GO:0005519 cytoskeletal regulatory protein binding(GO:0005519)
0.1 0.4 GO:0072320 volume-sensitive chloride channel activity(GO:0072320)
0.1 0.8 GO:0008597 calcium-dependent protein serine/threonine phosphatase regulator activity(GO:0008597)
0.1 1.4 GO:0035612 AP-2 adaptor complex binding(GO:0035612)
0.1 1.1 GO:0044323 retinoic acid-responsive element binding(GO:0044323) cobalt ion binding(GO:0050897)
0.1 1.0 GO:0000900 translation repressor activity, nucleic acid binding(GO:0000900)
0.1 1.1 GO:0008484 sulfuric ester hydrolase activity(GO:0008484)
0.1 1.7 GO:0043274 phospholipase binding(GO:0043274)
0.1 1.5 GO:0005251 delayed rectifier potassium channel activity(GO:0005251)
0.1 0.2 GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity(GO:0004616)
0.0 0.4 GO:0008508 bile acid:sodium symporter activity(GO:0008508)
0.0 0.1 GO:0004828 serine-tRNA ligase activity(GO:0004828)
0.0 1.1 GO:0031489 myosin V binding(GO:0031489)
0.0 2.1 GO:0042169 SH2 domain binding(GO:0042169)
0.0 1.6 GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709)
0.0 1.3 GO:0071837 HMG box domain binding(GO:0071837)
0.0 0.4 GO:0031996 thioesterase binding(GO:0031996)
0.0 0.6 GO:0030898 actin-dependent ATPase activity(GO:0030898)
0.0 0.1 GO:0070728 leucine binding(GO:0070728)
0.0 0.2 GO:0050815 phosphoserine binding(GO:0050815)
0.0 0.8 GO:0004683 calmodulin-dependent protein kinase activity(GO:0004683)
0.0 0.4 GO:0005234 ionotropic glutamate receptor activity(GO:0004970) extracellular-glutamate-gated ion channel activity(GO:0005234)
0.0 0.6 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.0 0.2 GO:0003688 DNA replication origin binding(GO:0003688)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.7 ST WNT CA2 CYCLIC GMP PATHWAY Wnt/Ca2+/cyclic GMP signaling.
0.0 2.1 PID LIS1 PATHWAY Lissencephaly gene (LIS1) in neuronal migration and development
0.0 1.4 PID TCR CALCIUM PATHWAY Calcium signaling in the CD4+ TCR pathway
0.0 0.6 PID AURORA A PATHWAY Aurora A signaling
0.0 0.4 SA TRKA RECEPTOR The TrkA receptor binds nerve growth factor to activate MAP kinase pathways and promote cell growth.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.1 REACTOME THE ACTIVATION OF ARYLSULFATASES Genes involved in The activation of arylsulfatases
0.1 1.6 REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 24 HYDROXYCHOLESTEROL Genes involved in Synthesis of bile acids and bile salts via 24-hydroxycholesterol
0.1 1.4 REACTOME EICOSANOID LIGAND BINDING RECEPTORS Genes involved in Eicosanoid ligand-binding receptors
0.1 4.2 REACTOME VOLTAGE GATED POTASSIUM CHANNELS Genes involved in Voltage gated Potassium channels
0.1 1.7 REACTOME CREB PHOSPHORYLATION THROUGH THE ACTIVATION OF CAMKII Genes involved in CREB phosphorylation through the activation of CaMKII
0.0 0.4 REACTOME NFKB IS ACTIVATED AND SIGNALS SURVIVAL Genes involved in NF-kB is activated and signals survival
0.0 0.8 REACTOME PLATELET SENSITIZATION BY LDL Genes involved in Platelet sensitization by LDL
0.0 0.4 REACTOME MTORC1 MEDIATED SIGNALLING Genes involved in mTORC1-mediated signalling
0.0 0.4 REACTOME ACTIVATION OF IRF3 IRF7 MEDIATED BY TBK1 IKK EPSILON Genes involved in Activation of IRF3/IRF7 mediated by TBK1/IKK epsilon
0.0 0.2 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.0 0.6 REACTOME DARPP 32 EVENTS Genes involved in DARPP-32 events
0.0 0.5 REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE Genes involved in Sema4D induced cell migration and growth-cone collapse
0.0 0.3 REACTOME CHONDROITIN SULFATE BIOSYNTHESIS Genes involved in Chondroitin sulfate biosynthesis