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PRJNA375882: Comprehensive Mouse Transcriptomic BodyMap

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Results for UGUGCGU

Z-value: 0.21

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miRNA associated with seed UGUGCGU

NamemiRBASE accession
mmu-miR-210-3p
MIMAT0000658

Activity profile of UGUGCGU motif

Sorted Z-values of UGUGCGU motif

Network of associatons between targets according to the STRING database.

First level regulatory network of UGUGCGU

PNG image of the network

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Top targets:

Promoter Score Transcript Gene Gene Info
chr3_-_72965136 2.02 ENSMUST00000059407.9
Slitrk3
SLIT and NTRK-like family, member 3
chr11_-_98220466 1.69 ENSMUST00000041685.7
Neurod2
neurogenic differentiation 2
chr17_-_45860580 1.09 ENSMUST00000180252.3
Tmem151b
transmembrane protein 151B
chr3_-_89230190 0.98 ENSMUST00000200436.2
ENSMUST00000029673.10
Efna3
ephrin A3
chr15_-_78602971 0.93 ENSMUST00000088592.6
Elfn2
leucine rich repeat and fibronectin type III, extracellular 2
chr7_-_16796309 0.35 ENSMUST00000153833.2
ENSMUST00000108492.9
Hif3a
hypoxia inducible factor 3, alpha subunit
chr9_-_114762986 0.32 ENSMUST00000146623.8
Gpd1l
glycerol-3-phosphate dehydrogenase 1-like
chr15_+_101071948 0.27 ENSMUST00000000544.12
Acvr1b
activin A receptor, type 1B
chr11_+_53410552 0.22 ENSMUST00000108987.8
ENSMUST00000121334.8
ENSMUST00000117061.8
Septin8
septin 8
chr7_-_25418401 0.19 ENSMUST00000125699.3
ENSMUST00000002683.3
Ccdc97
coiled-coil domain containing 97
chr6_+_114620054 0.08 ENSMUST00000032457.17
Atg7
autophagy related 7

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.7 GO:2000297 negative regulation of synapse maturation(GO:2000297)
0.1 1.0 GO:1902961 positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process(GO:1902961) positive regulation of aspartic-type peptidase activity(GO:1905247)
0.1 0.3 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.1 0.3 GO:1901165 positive regulation of trophoblast cell migration(GO:1901165)
0.0 0.1 GO:0016237 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) suppression by virus of host autophagy(GO:0039521) amino acid homeostasis(GO:0080144) negative regulation of sphingolipid biosynthesis involved in cellular sphingolipid homeostasis(GO:0090157)
0.0 2.0 GO:0051965 positive regulation of synapse assembly(GO:0051965)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0048179 activin receptor complex(GO:0048179)
0.1 0.3 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.0 0.3 GO:0016361 activin receptor activity, type I(GO:0016361)
0.0 1.7 GO:0070888 E-box binding(GO:0070888)
0.0 0.1 GO:0019779 Atg12 activating enzyme activity(GO:0019778) Atg8 activating enzyme activity(GO:0019779)
0.0 0.9 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.0 1.0 GO:0046875 ephrin receptor binding(GO:0046875)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.0 PID EPHA FWDPATHWAY EPHA forward signaling
0.0 0.3 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha