PRJNA375882: Comprehensive Mouse Transcriptomic BodyMap
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Zfx | mm39_v1_chrX_-_93166964_93166989 | 0.50 | 8.8e-06 | Click! |
Zfp711 | mm39_v1_chrX_+_111524998_111524998 | 0.21 | 8.1e-02 | Click! |
Promoter | Score | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_+_87192067 Show fit | 11.06 |
ENSMUST00000027472.7
|
EF hand domain containing 1 |
|
chr15_+_89218601 Show fit | 9.69 |
ENSMUST00000023282.9
|
myo-inositol oxygenase |
|
chr3_-_90373165 Show fit | 7.98 |
ENSMUST00000029540.13
|
natriuretic peptide receptor 1 |
|
chr11_+_78079243 Show fit | 7.74 |
ENSMUST00000002128.14
ENSMUST00000150941.8 |
RAB34, member RAS oncogene family |
|
chr9_-_52079872 Show fit | 7.61 |
ENSMUST00000213645.2
|
zinc finger CCCH type containing 12C |
|
chr11_+_78079631 Show fit | 7.23 |
ENSMUST00000056241.12
ENSMUST00000207728.2 |
RAB34, member RAS oncogene family |
|
chr11_+_78079562 Show fit | 7.22 |
ENSMUST00000108322.9
|
RAB34, member RAS oncogene family |
|
chr6_-_85351524 Show fit | 7.05 |
ENSMUST00000060837.10
|
RAB11 family interacting protein 5 (class I) |
|
chr8_-_105350898 Show fit | 6.65 |
ENSMUST00000212882.2
ENSMUST00000163783.4 |
cadherin 16 |
|
chr2_-_38604503 Show fit | 6.63 |
ENSMUST00000028084.5
|
nuclear receptor subfamily 5, group A, member 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 27.6 | GO:0060271 | cilium morphogenesis(GO:0060271) |
4.3 | 21.6 | GO:1905161 | protein localization to phagocytic vesicle(GO:1905161) regulation of protein localization to phagocytic vesicle(GO:1905169) positive regulation of protein localization to phagocytic vesicle(GO:1905171) |
0.6 | 21.2 | GO:0016339 | calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0016339) |
0.9 | 18.2 | GO:0060732 | positive regulation of inositol phosphate biosynthetic process(GO:0060732) |
1.1 | 18.1 | GO:0030948 | negative regulation of vascular endothelial growth factor receptor signaling pathway(GO:0030948) |
0.5 | 15.3 | GO:0019363 | pyridine nucleotide biosynthetic process(GO:0019363) |
2.2 | 13.0 | GO:0070164 | negative regulation of adiponectin secretion(GO:0070164) |
0.5 | 12.8 | GO:0043968 | histone H2A acetylation(GO:0043968) |
0.9 | 12.4 | GO:0046449 | creatinine metabolic process(GO:0046449) |
0.3 | 11.7 | GO:0046854 | phosphatidylinositol phosphorylation(GO:0046854) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 124.1 | GO:0005634 | nucleus(GO:0005634) |
0.1 | 120.7 | GO:0005739 | mitochondrion(GO:0005739) |
0.1 | 89.4 | GO:0005654 | nucleoplasm(GO:0005654) |
0.2 | 85.5 | GO:0016607 | nuclear speck(GO:0016607) |
0.1 | 45.6 | GO:0005730 | nucleolus(GO:0005730) |
0.1 | 29.7 | GO:0005764 | lytic vacuole(GO:0000323) lysosome(GO:0005764) |
0.2 | 23.4 | GO:0005604 | basement membrane(GO:0005604) |
0.1 | 22.1 | GO:0001650 | fibrillar center(GO:0001650) |
0.1 | 21.7 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
0.2 | 21.4 | GO:0005814 | centriole(GO:0005814) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 70.1 | GO:0003723 | RNA binding(GO:0003723) |
0.0 | 35.3 | GO:0003677 | DNA binding(GO:0003677) |
0.1 | 29.9 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
1.0 | 27.2 | GO:0017160 | Ral GTPase binding(GO:0017160) |
0.1 | 26.0 | GO:0008168 | methyltransferase activity(GO:0008168) |
0.4 | 25.6 | GO:0043015 | gamma-tubulin binding(GO:0043015) |
0.1 | 20.5 | GO:0003714 | transcription corepressor activity(GO:0003714) |
2.9 | 20.4 | GO:0004991 | parathyroid hormone receptor activity(GO:0004991) |
0.3 | 19.2 | GO:0035064 | methylated histone binding(GO:0035064) |
0.4 | 16.8 | GO:0005487 | nucleocytoplasmic transporter activity(GO:0005487) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 32.2 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.5 | 30.5 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.2 | 19.5 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.5 | 18.9 | PID MYC PATHWAY | C-MYC pathway |
0.2 | 18.2 | PID TELOMERASE PATHWAY | Regulation of Telomerase |
0.3 | 18.0 | PID PTP1B PATHWAY | Signaling events mediated by PTP1B |
0.4 | 17.0 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.3 | 15.7 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.3 | 14.8 | PID FANCONI PATHWAY | Fanconi anemia pathway |
0.1 | 14.0 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 25.5 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.3 | 21.7 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.1 | 17.6 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |
0.4 | 16.9 | REACTOME TRANSPORT OF MATURE MRNA DERIVED FROM AN INTRONLESS TRANSCRIPT | Genes involved in Transport of Mature mRNA Derived from an Intronless Transcript |
0.5 | 16.0 | REACTOME DEADENYLATION OF MRNA | Genes involved in Deadenylation of mRNA |
0.4 | 15.6 | REACTOME STEROID HORMONES | Genes involved in Steroid hormones |
0.9 | 14.5 | REACTOME ORGANIC CATION ANION ZWITTERION TRANSPORT | Genes involved in Organic cation/anion/zwitterion transport |
0.3 | 13.3 | REACTOME SYNTHESIS OF PA | Genes involved in Synthesis of PA |
0.4 | 12.4 | REACTOME SIGNALING BY HIPPO | Genes involved in Signaling by Hippo |
0.2 | 12.3 | REACTOME MITOCHONDRIAL PROTEIN IMPORT | Genes involved in Mitochondrial Protein Import |