mm39_v1_chr17_+_64907697_64907761	0.321739	AACCUGG	ENSMUST00000086723.10|Man2a1|ENSMUSG00000024085.14|mannosidase 2, alpha 1
mm39_v1_chr5_+_73071607_73071647	0.272364	AACCUGG	ENSMUST00000144843.8|Slain2|ENSMUSG00000036087.19|SLAIN motif family, member 2
mm39_v1_chrX_+_41238193_41238289	0.271607	AACCUGG	ENSMUST00000115073.9|Stag2|ENSMUSG00000025862.15|stromal antigen 2	ENSMUST00000115072.8|Stag2|ENSMUSG00000025862.15|stromal antigen 2
mm39_v1_chr6_-_39183712_39183769	0.260869	AACCUGG	ENSMUST00000002305.9|Kdm7a|ENSMUSG00000042599.9|lysine (K)-specific demethylase 7A
mm39_v1_chr2_+_75489596_75489662	0.259067	AACCUGG	ENSMUST00000111964.8|Hnrnpa3|ENSMUSG00000059005.14|heterogeneous nuclear ribonucleoprotein A3	ENSMUST00000111962.8|Hnrnpa3|ENSMUSG00000059005.14|heterogeneous nuclear ribonucleoprotein A3	ENSMUST00000111961.8|Hnrnpa3|ENSMUSG00000059005.14|heterogeneous nuclear ribonucleoprotein A3	ENSMUST00000164947.9|Hnrnpa3|ENSMUSG00000059005.14|heterogeneous nuclear ribonucleoprotein A3	ENSMUST00000090792.11|Hnrnpa3|ENSMUSG00000059005.14|heterogeneous nuclear ribonucleoprotein A3
mm39_v1_chr2_+_70305267_70305267	0.231648	AACCUGG	ENSMUST00000100043.3|Sp5|ENSMUSG00000075304.3|trans-acting transcription factor 5
mm39_v1_chr5_-_21156766_21156824	0.179678	AACCUGG	ENSMUST00000036489.10|Rsbn1l|ENSMUSG00000039968.10|round spermatid basic protein 1-like
mm39_v1_chr6_-_52211882_52211940	0.138346	AACCUGG	ENSMUST00000125581.2|Hoxa10|ENSMUSG00000000938.12|homeobox A10
mm39_v1_chr1_-_143578542_143578631	0.133588	AACCUGG	ENSMUST00000018337.9|Cdc73|ENSMUSG00000026361.10|cell division cycle 73, Paf1/RNA polymerase II complex component
mm39_v1_chr15_+_103148824_103148921	0.127985	AACCUGG	ENSMUST00000036004.16|Hnrnpa1|ENSMUSG00000046434.17|heterogeneous nuclear ribonucleoprotein A1	ENSMUST00000087351.9|Hnrnpa1|ENSMUSG00000046434.17|heterogeneous nuclear ribonucleoprotein A1	ENSMUST00000231141.2|Hnrnpa1|ENSMUSG00000046434.17|heterogeneous nuclear ribonucleoprotein A1
mm39_v1_chr9_+_72439496_72439553	0.118707	AACCUGG	ENSMUST00000163401.9|Rfx7|ENSMUSG00000037674.16|regulatory factor X, 7	ENSMUST00000093820.10|Rfx7|ENSMUSG00000037674.16|regulatory factor X, 7
mm39_v1_chr5_-_21260878_21260960	0.10153	AACCUGG	ENSMUST00000030556.8|Ptpn12|ENSMUSG00000028771.14|protein tyrosine phosphatase, non-receptor type 12
mm39_v1_chr19_+_25587896_25587919	0.0970876	AACCUGG	ENSMUST00000048935.6|Dmrt3|ENSMUSG00000042372.6|doublesex and mab-3 related transcription factor 3
mm39_v1_chr4_+_34550918_34550945	0.0932925	AACCUGG	ENSMUST00000084299.6|Akirin2|ENSMUSG00000028291.8|akirin 2
mm39_v1_chr5_+_88868714_88868734	0.0861055	AACCUGG	ENSMUST00000113229.8|Mob1b|ENSMUSG00000006262.16|MOB kinase activator 1B	ENSMUST00000006424.8|Mob1b|ENSMUSG00000006262.16|MOB kinase activator 1B
mm39_v1_chr2_+_79085844_79085998	0.0856068	AACCUGG	ENSMUST00000099972.5|Itga4|ENSMUSG00000027009.19|integrin alpha 4
mm39_v1_chr1_-_84818223_84818261	0.08544	AACCUGG	ENSMUST00000186465.7|Trip12|ENSMUSG00000026219.15|thyroid hormone receptor interactor 12
mm39_v1_chr10_-_118705029_118705091	0.0728081	AACCUGG	ENSMUST00000004281.10|Dyrk2|ENSMUSG00000028630.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
mm39_v1_chr5_+_108416763_108416790	0.0683529	AACCUGG	ENSMUST00000031190.5|Dr1|ENSMUSG00000029265.5|down-regulator of transcription 1
mm39_v1_chr6_-_71417607_71417630	0.0468409	AACCUGG	ENSMUST00000002292.15|Rmnd5a|ENSMUSG00000002222.15|required for meiotic nuclear division 5 homolog A
mm39_v1_chr6_-_38853097_38853167	0.0453355	AACCUGG	ENSMUST00000161779.8|Hipk2|ENSMUSG00000061436.16|homeodomain interacting protein kinase 2
mm39_v1_chr3_-_69034425_69034446	0.0399971	AACCUGG	ENSMUST00000194558.6|Kpna4|ENSMUSG00000027782.11|karyopherin (importin) alpha 4	ENSMUST00000029353.9|Kpna4|ENSMUSG00000027782.11|karyopherin (importin) alpha 4
mm39_v1_chr7_-_97958679_97958745	0.0316253	AACCUGG	ENSMUST00000033020.14|Acer3|ENSMUSG00000030760.15|alkaline ceramidase 3
mm39_v1_chr9_-_36708569_36708589	0.0252965	AACCUGG	ENSMUST00000163192.11|Ei24|ENSMUSG00000062762.18|etoposide induced 2.4 mRNA
mm39_v1_chr2_-_174314741_174314874	0.0252649	AACCUGG	ENSMUST00000016401.15|Prelid3b|ENSMUSG00000016257.16|PRELI domain containing 3B
mm39_v1_chr6_-_51446752_51446834	0.0134802	AACCUGG	ENSMUST00000204188.3|Hnrnpa2b1|ENSMUSG00000004980.17|heterogeneous nuclear ribonucleoprotein A2/B1	ENSMUST00000203220.3|Hnrnpa2b1|ENSMUSG00000004980.17|heterogeneous nuclear ribonucleoprotein A2/B1	ENSMUST00000114459.8|Hnrnpa2b1|ENSMUSG00000004980.17|heterogeneous nuclear ribonucleoprotein A2/B1	ENSMUST00000090002.10|Hnrnpa2b1|ENSMUSG00000004980.17|heterogeneous nuclear ribonucleoprotein A2/B1
mm39_v1_chr8_-_48443525_48443612	0.0123886	AACCUGG	ENSMUST00000057561.9|Wwc2|ENSMUSG00000031563.9|WW, C2 and coiled-coil domain containing 2
mm39_v1_chr9_-_36678868_36678975	0.0117014	AACCUGG	ENSMUST00000217599.2|Stt3a|ENSMUSG00000032116.19|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)	ENSMUST00000120381.9|Stt3a|ENSMUSG00000032116.19|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
mm39_v1_chr1_+_86510614_86510660	0.00832857	AACCUGG	ENSMUST00000121534.8|Cops7b|ENSMUSG00000026240.13|COP9 signalosome subunit 7B	ENSMUST00000149542.2|Cops7b|ENSMUSG00000026240.13|COP9 signalosome subunit 7B
mm39_v1_chr9_-_121106209_121106282	0.00270361	AACCUGG	ENSMUST00000051479.13|Ulk4|ENSMUSG00000040936.16|unc-51-like kinase 4	ENSMUST00000171923.8|Ulk4|ENSMUSG00000040936.16|unc-51-like kinase 4
