mm39_v1_chrX_-_141749704_141749730	1.29544	AACGGAA	ENSMUST00000041317.3|Ammecr1|ENSMUSG00000042225.4|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
mm39_v1_chr2_+_167530835_167530894	1.21719	AACGGAA	ENSMUST00000070642.4|Cebpb|ENSMUSG00000056501.4|CCAAT/enhancer binding protein (C/EBP), beta
mm39_v1_chr5_+_3393893_3393945	1.19939	AACGGAA	ENSMUST00000165117.8|Cdk6|ENSMUSG00000040274.12|cyclin-dependent kinase 6	ENSMUST00000197385.2|Cdk6|ENSMUSG00000040274.12|cyclin-dependent kinase 6
mm39_v1_chr15_-_73056713_73056822	1.06837	AACGGAA	ENSMUST00000044113.12|Ago2|ENSMUSG00000036698.12|argonaute RISC catalytic subunit 2
mm39_v1_chr4_+_106418224_106418235	0.992835	AACGGAA	ENSMUST00000047973.4|Dhcr24|ENSMUSG00000034926.4|24-dehydrocholesterol reductase
mm39_v1_chr1_-_64776890_64776915	0.928448	AACGGAA	ENSMUST00000116133.4|Fzd5|ENSMUSG00000045005.10|frizzled class receptor 5	ENSMUST00000063982.7|Fzd5|ENSMUSG00000045005.10|frizzled class receptor 5
mm39_v1_chr15_+_58761057_58761080	0.731702	AACGGAA	ENSMUST00000036904.7|Rnf139|ENSMUSG00000037075.8|ring finger protein 139
mm39_v1_chr4_-_19708910_19709004	0.597227	AACGGAA	ENSMUST00000108246.9|Wwp1|ENSMUSG00000041058.16|WW domain containing E3 ubiquitin protein ligase 1
mm39_v1_chr4_+_139302009_139302036	0.539159	AACGGAA	ENSMUST00000174078.2|Iffo2|ENSMUSG00000041025.16|intermediate filament family orphan 2
mm39_v1_chr6_-_99243455_99243501	0.452223	AACGGAA	ENSMUST00000113326.9|Foxp1|ENSMUSG00000030067.18|forkhead box P1
mm39_v1_chr17_+_73225292_73225311	0.446612	AACGGAA	ENSMUST00000024857.14|Lbh|ENSMUSG00000024063.14|limb-bud and heart
mm39_v1_chr14_-_25769457_25769513	0.424705	AACGGAA	ENSMUST00000069180.8|Zcchc24|ENSMUSG00000055538.8|zinc finger, CCHC domain containing 24
mm39_v1_chr18_+_31892933_31893026	0.417832	AACGGAA	ENSMUST00000115808.4|Ammecr1l|ENSMUSG00000041915.10|AMME chromosomal region gene 1-like
mm39_v1_chr4_+_128548479_128548531	0.405373	AACGGAA	ENSMUST00000030588.13|Phc2|ENSMUSG00000028796.18|polyhomeotic 2	ENSMUST00000136377.8|Phc2|ENSMUSG00000028796.18|polyhomeotic 2
mm39_v1_chr11_-_33153587_33153612	0.371445	AACGGAA	ENSMUST00000037746.8|Tlx3|ENSMUSG00000040610.8|T cell leukemia, homeobox 3
mm39_v1_chr5_+_123280250_123280350	0.30924	AACGGAA	ENSMUST00000174836.8|Setd1b|ENSMUSG00000038384.17|SET domain containing 1B	ENSMUST00000163030.9|Setd1b|ENSMUSG00000038384.17|SET domain containing 1B
mm39_v1_chrX_-_13712746_13712826	0.301397	AACGGAA	ENSMUST00000115436.9|Cask|ENSMUSG00000031012.18|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	ENSMUST00000033321.11|Cask|ENSMUSG00000031012.18|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	ENSMUST00000115438.10|Cask|ENSMUSG00000031012.18|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm39_v1_chr10_-_115087309_115087384	0.213639	AACGGAA	ENSMUST00000020339.10|Tbc1d15|ENSMUSG00000020130.10|TBC1 domain family, member 15
mm39_v1_chr8_-_89770790_89770823	0.190089	AACGGAA	ENSMUST00000034090.8|Sall1|ENSMUSG00000031665.8|spalt like transcription factor 1
mm39_v1_chr17_-_32607859_32608090	0.173491	AACGGAA	ENSMUST00000087703.12|Wiz|ENSMUSG00000024050.19|widely-interspaced zinc finger motifs	ENSMUST00000170603.3|Wiz|ENSMUSG00000024050.19|widely-interspaced zinc finger motifs
mm39_v1_chr4_+_97665843_97665870	0.121885	AACGGAA	ENSMUST00000075448.13|Nfia|ENSMUSG00000028565.19|nuclear factor I/A	ENSMUST00000092532.13|Nfia|ENSMUSG00000028565.19|nuclear factor I/A
mm39_v1_chr11_+_87959067_87959115	0.053104	AACGGAA	ENSMUST00000018521.11|Vezf1|ENSMUSG00000018377.11|vascular endothelial zinc finger 1
mm39_v1_chr19_+_3817396_3817523	0.035102	AACGGAA	ENSMUST00000052699.13|Kmt5b|ENSMUSG00000045098.20|lysine methyltransferase 5B	ENSMUST00000113974.11|Kmt5b|ENSMUSG00000045098.20|lysine methyltransferase 5B	ENSMUST00000113972.9|Kmt5b|ENSMUSG00000045098.20|lysine methyltransferase 5B	ENSMUST00000113973.8|Kmt5b|ENSMUSG00000045098.20|lysine methyltransferase 5B	ENSMUST00000113977.9|Kmt5b|ENSMUSG00000045098.20|lysine methyltransferase 5B	ENSMUST00000113968.9|Kmt5b|ENSMUSG00000045098.20|lysine methyltransferase 5B
mm39_v1_chr12_+_35097179_35097230	0.0220286	AACGGAA	ENSMUST00000163677.3|Snx13|ENSMUSG00000020590.17|sorting nexin 13	ENSMUST00000048519.17|Snx13|ENSMUSG00000020590.17|sorting nexin 13
mm39_v1_chr5_+_30971915_30971985	0.0185952	AACGGAA	ENSMUST00000031058.15|Mapre3|ENSMUSG00000029166.15|microtubule-associated protein, RP/EB family, member 3
