mm39_v1_chr6_-_52181393_52181567	11.2362	AAGGCAC	ENSMUST00000048794.7|Hoxa5|ENSMUSG00000038253.7|homeobox A5
mm39_v1_chr7_+_112278520_112278532	9.90611	AAGGCAC	ENSMUST00000084705.13|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000239442.2|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000239404.2|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000059768.18|Tead1|ENSMUSG00000055320.19|TEA domain family member 1
mm39_v1_chr18_+_11052458_11052479	9.61248	AAGGCAC	ENSMUST00000047762.10|Gata6|ENSMUSG00000005836.11|GATA binding protein 6
mm39_v1_chr6_+_17307639_17307730	9.09383	AAGGCAC	ENSMUST00000115453.2|Cav1|ENSMUSG00000007655.17|caveolin 1, caveolae protein
mm39_v1_chr2_+_35172392_35172454	8.89244	AAGGCAC	ENSMUST00000028239.8|Gsn|ENSMUSG00000026879.15|gelsolin
mm39_v1_chr16_+_24212284_24212320	8.8618	AAGGCAC	ENSMUST00000038053.14|Lpp|ENSMUSG00000033306.16|LIM domain containing preferred translocation partner in lipoma
mm39_v1_chr7_+_34818709_34818728	8.65469	AAGGCAC	ENSMUST00000205391.2|Cebpa|ENSMUSG00000034957.11|CCAAT/enhancer binding protein (C/EBP), alpha	ENSMUST00000042985.11|Cebpa|ENSMUSG00000034957.11|CCAAT/enhancer binding protein (C/EBP), alpha
mm39_v1_chr8_-_11362731_11362826	8.42385	AAGGCAC	ENSMUST00000033898.10|Col4a1|ENSMUSG00000031502.12|collagen, type IV, alpha 1
mm39_v1_chr16_+_78098344_78098384	8.22971	AAGGCAC	ENSMUST00000232148.2|Cxadr|ENSMUSG00000022865.15|coxsackie virus and adenovirus receptor	ENSMUST00000023572.15|Cxadr|ENSMUSG00000022865.15|coxsackie virus and adenovirus receptor
mm39_v1_chr7_+_89053562_89053609	8.18369	AAGGCAC	ENSMUST00000058755.5|Fzd4|ENSMUSG00000049791.5|frizzled class receptor 4
mm39_v1_chr4_-_55532453_55532485	8.06714	AAGGCAC	ENSMUST00000132746.2|Klf4|ENSMUSG00000003032.9|Kruppel-like factor 4 (gut)	ENSMUST00000107619.3|Klf4|ENSMUSG00000003032.9|Kruppel-like factor 4 (gut)
mm39_v1_chr1_-_153208477_153208566	7.79678	AAGGCAC	ENSMUST00000027752.15|Lamc1|ENSMUSG00000026478.15|laminin, gamma 1
mm39_v1_chr19_+_42135812_42135839	7.66788	AAGGCAC	ENSMUST00000061111.10|Marveld1|ENSMUSG00000044345.10|MARVEL (membrane-associating) domain containing 1
mm39_v1_chr2_-_66615247_66615264	7.66712	AAGGCAC	ENSMUST00000042792.7|Scn7a|ENSMUSG00000034810.8|sodium channel, voltage-gated, type VII, alpha
mm39_v1_chr5_+_65127412_65127432	7.43119	AAGGCAC	ENSMUST00000031080.15|Fam114a1|ENSMUSG00000029185.15|family with sequence similarity 114, member A1
mm39_v1_chr9_-_21223631_21223642	7.39137	AAGGCAC	ENSMUST00000115433.11|Ap1m2|ENSMUSG00000003309.15|adaptor protein complex AP-1, mu 2 subunit
mm39_v1_chr18_+_4921663_4921726	7.3147	AAGGCAC	ENSMUST00000143254.8|Svil|ENSMUSG00000024236.19|supervillin
mm39_v1_chrX_-_7537580_7537635	7.30642	AAGGCAC	ENSMUST00000033486.6|Plp2|ENSMUSG00000031146.7|proteolipid protein 2
mm39_v1_chr2_+_119156265_119156298	7.18875	AAGGCAC	ENSMUST00000102517.4|Dll4|ENSMUSG00000027314.7|delta like canonical Notch ligand 4
mm39_v1_chr13_-_60325170_60325190	7.08688	AAGGCAC	ENSMUST00000065086.6|Gas1|ENSMUSG00000052957.9|growth arrest specific 1
mm39_v1_chr5_+_137348638_137348775	6.92525	AAGGCAC	ENSMUST00000166239.8|Ephb4|ENSMUSG00000029710.16|Eph receptor B4	ENSMUST00000111054.2|Ephb4|ENSMUSG00000029710.16|Eph receptor B4
mm39_v1_chr5_+_30745447_30745514	6.82878	AAGGCAC	ENSMUST00000066295.5|Kcnk3|ENSMUSG00000049265.9|potassium channel, subfamily K, member 3
mm39_v1_chr9_-_71499628_71499654	6.79482	AAGGCAC	ENSMUST00000093823.8|Myzap|ENSMUSG00000041361.14|myocardial zonula adherens protein
mm39_v1_chr2_-_136958544_136958564	6.77354	AAGGCAC	ENSMUST00000028735.8|Jag1|ENSMUSG00000027276.8|jagged 1
mm39_v1_chr14_-_22039543_22039669	6.76953	AAGGCAC	ENSMUST00000043409.9|Zfp503|ENSMUSG00000039081.11|zinc finger protein 503
mm39_v1_chr5_+_32293145_32293201	6.51171	AAGGCAC	ENSMUST00000031017.11|Fosl2|ENSMUSG00000029135.11|fos-like antigen 2
mm39_v1_chr2_+_27567213_27567241	6.46104	AAGGCAC	ENSMUST00000077257.12|Rxra|ENSMUSG00000015846.16|retinoid X receptor alpha
mm39_v1_chr10_-_62067026_62067033	6.32498	AAGGCAC	ENSMUST00000047883.11|Tspan15|ENSMUSG00000037031.11|tetraspanin 15
mm39_v1_chr3_-_131065658_131065750	6.23555	AAGGCAC	ENSMUST00000029610.9|Hadh|ENSMUSG00000027984.9|hydroxyacyl-Coenzyme A dehydrogenase
mm39_v1_chr8_+_129412135_129412263	6.1645	AAGGCAC	ENSMUST00000090006.12|Itgb1|ENSMUSG00000025809.16|integrin beta 1 (fibronectin receptor beta)
mm39_v1_chr1_+_74430575_74430669	5.98259	AAGGCAC	ENSMUST00000027367.14|Ctdsp1|ENSMUSG00000026176.14|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
mm39_v1_chr15_-_102165884_102165952	5.97963	AAGGCAC	ENSMUST00000043172.15|Rarg|ENSMUSG00000001288.16|retinoic acid receptor, gamma
mm39_v1_chr18_+_58011691_58011750	5.96739	AAGGCAC	ENSMUST00000115366.3|Slc12a2|ENSMUSG00000024597.12|solute carrier family 12, member 2
mm39_v1_chr15_-_89064936_89064991	5.89509	AAGGCAC	ENSMUST00000109331.9|Plxnb2|ENSMUSG00000036606.18|plexin B2
mm39_v1_chr19_+_38384428_38384532	5.83428	AAGGCAC	ENSMUST00000054098.4|Slc35g1|ENSMUSG00000044026.4|solute carrier family 35, member G1
mm39_v1_chr10_+_98943999_98944068	5.82605	AAGGCAC	ENSMUST00000161240.4|Galnt4|ENSMUSG00000090035.4|polypeptide N-acetylgalactosaminyltransferase 4
mm39_v1_chr19_+_3373285_3373356	5.77151	AAGGCAC	ENSMUST00000025835.6|Cpt1a|ENSMUSG00000024900.6|carnitine palmitoyltransferase 1a, liver
mm39_v1_chr8_-_27664651_27664680	5.7603	AAGGCAC	ENSMUST00000054212.7|Rab11fip1|ENSMUSG00000031488.15|RAB11 family interacting protein 1 (class I)	ENSMUST00000033878.14|Rab11fip1|ENSMUSG00000031488.15|RAB11 family interacting protein 1 (class I)	ENSMUST00000209377.2|Rab11fip1|ENSMUSG00000031488.15|RAB11 family interacting protein 1 (class I)
mm39_v1_chr16_+_37597235_37597235	5.68619	AAGGCAC	ENSMUST00000114763.3|Fstl1|ENSMUSG00000022816.12|follistatin-like 1
mm39_v1_chr1_-_134006847_134006862	5.60961	AAGGCAC	ENSMUST00000020692.7|Btg2|ENSMUSG00000020423.7|BTG anti-proliferation factor 2
mm39_v1_chr5_-_98178811_98178821	5.54712	AAGGCAC	ENSMUST00000031281.14|Antxr2|ENSMUSG00000029338.14|anthrax toxin receptor 2
mm39_v1_chr6_-_120271520_120271678	5.48413	AAGGCAC	ENSMUST00000057283.8|B4galnt3|ENSMUSG00000041372.11|beta-1,4-N-acetyl-galactosaminyl transferase 3	ENSMUST00000212457.2|B4galnt3|ENSMUSG00000041372.11|beta-1,4-N-acetyl-galactosaminyl transferase 3
mm39_v1_chr19_-_31742427_31742480	5.47392	AAGGCAC	ENSMUST00000065067.14|Prkg1|ENSMUSG00000052920.17|protein kinase, cGMP-dependent, type I
mm39_v1_chr12_-_87435091_87435129	5.46661	AAGGCAC	ENSMUST00000021424.5|Sptlc2|ENSMUSG00000021036.11|serine palmitoyltransferase, long chain base subunit 2
mm39_v1_chr7_-_98010534_98010549	5.44611	AAGGCAC	ENSMUST00000165257.8|Tsku|ENSMUSG00000049580.13|tsukushi, small leucine rich proteoglycan
mm39_v1_chr6_+_97783975_97784028	5.39787	AAGGCAC	ENSMUST00000203884.3|Mitf|ENSMUSG00000035158.16|melanogenesis associated transcription factor	ENSMUST00000043637.14|Mitf|ENSMUSG00000035158.16|melanogenesis associated transcription factor
mm39_v1_chr3_-_85653573_85653573	5.37948	AAGGCAC	ENSMUST00000118408.8|Fam160a1|ENSMUSG00000051000.18|family with sequence similarity 160, member A1
mm39_v1_chrX_-_141749704_141749730	5.3752	AAGGCAC	ENSMUST00000041317.3|Ammecr1|ENSMUSG00000042225.4|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
mm39_v1_chr10_+_108167973_108168020	5.36147	AAGGCAC	ENSMUST00000095313.5|Pawr|ENSMUSG00000035873.9|PRKC, apoptosis, WT1, regulator
mm39_v1_chr7_+_88079465_88079495	5.27501	AAGGCAC	ENSMUST00000107256.4|Rab38|ENSMUSG00000030559.9|RAB38, member RAS oncogene family
mm39_v1_chr13_+_5911481_5911521	5.27159	AAGGCAC	ENSMUST00000000080.8|Klf6|ENSMUSG00000000078.8|Kruppel-like factor 6
mm39_v1_chr10_-_7656635_7656687	5.26504	AAGGCAC	ENSMUST00000124838.2|Ginm1|ENSMUSG00000040006.14|glycoprotein integral membrane 1	ENSMUST00000039763.14|Ginm1|ENSMUSG00000040006.14|glycoprotein integral membrane 1
mm39_v1_chr17_-_66258110_66258221	5.1755	AAGGCAC	ENSMUST00000233580.2|Twsg1|ENSMUSG00000024098.7|twisted gastrulation BMP signaling modulator 1	ENSMUST00000024906.6|Twsg1|ENSMUSG00000024098.7|twisted gastrulation BMP signaling modulator 1
mm39_v1_chr13_+_74269554_74269634	5.17345	AAGGCAC	ENSMUST00000036208.7|Slc9a3|ENSMUSG00000036123.9|solute carrier family 9 (sodium/hydrogen exchanger), member 3	ENSMUST00000225423.2|Slc9a3|ENSMUSG00000036123.9|solute carrier family 9 (sodium/hydrogen exchanger), member 3	ENSMUST00000221703.2|Slc9a3|ENSMUSG00000036123.9|solute carrier family 9 (sodium/hydrogen exchanger), member 3
mm39_v1_chr17_+_64907697_64907761	5.15954	AAGGCAC	ENSMUST00000086723.10|Man2a1|ENSMUSG00000024085.14|mannosidase 2, alpha 1
mm39_v1_chr1_-_64776890_64776915	5.15432	AAGGCAC	ENSMUST00000116133.4|Fzd5|ENSMUSG00000045005.10|frizzled class receptor 5	ENSMUST00000063982.7|Fzd5|ENSMUSG00000045005.10|frizzled class receptor 5
mm39_v1_chr11_+_75541324_75541370	5.11352	AAGGCAC	ENSMUST00000102505.10|Myo1c|ENSMUSG00000017774.20|myosin IC
mm39_v1_chr17_+_87270504_87270537	5.07037	AAGGCAC	ENSMUST00000024956.15|Rhoq|ENSMUSG00000024143.16|ras homolog family member Q
mm39_v1_chr7_+_141047298_141047338	5.05158	AAGGCAC	ENSMUST00000106000.10|Cd151|ENSMUSG00000025510.15|CD151 antigen	ENSMUST00000209892.2|Cd151|ENSMUSG00000025510.15|CD151 antigen	ENSMUST00000177840.9|Cd151|ENSMUSG00000025510.15|CD151 antigen
mm39_v1_chr11_-_47270201_47270349	5.00531	AAGGCAC	ENSMUST00000077221.6|Sgcd|ENSMUSG00000020354.16|sarcoglycan, delta (dystrophin-associated glycoprotein)
mm39_v1_chr2_+_32766126_32766253	4.99076	AAGGCAC	ENSMUST00000028135.15|Niban2|ENSMUSG00000026796.17|niban apoptosis regulator 2
mm39_v1_chr7_+_44667377_44667433	4.98201	AAGGCAC	ENSMUST00000044111.10|Rras|ENSMUSG00000038387.10|related RAS viral (r-ras) oncogene
mm39_v1_chr11_+_53991750_53991853	4.98168	AAGGCAC	ENSMUST00000093107.12|P4ha2|ENSMUSG00000018906.15|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	ENSMUST00000019050.12|P4ha2|ENSMUSG00000018906.15|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	ENSMUST00000174616.8|P4ha2|ENSMUSG00000018906.15|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	ENSMUST00000129499.8|P4ha2|ENSMUSG00000018906.15|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	ENSMUST00000126840.8|P4ha2|ENSMUSG00000018906.15|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
mm39_v1_chr3_-_89294430_89294496	4.97967	AAGGCAC	ENSMUST00000107433.8|Zbtb7b|ENSMUSG00000028042.16|zinc finger and BTB domain containing 7B
mm39_v1_chr7_+_3341597_3341647	4.97254	AAGGCAC	ENSMUST00000164553.8|Myadm|ENSMUSG00000068566.14|myeloid-associated differentiation marker
mm39_v1_chr17_+_5891582_5891686	4.96675	AAGGCAC	ENSMUST00000002436.11|Snx9|ENSMUSG00000002365.11|sorting nexin 9
mm39_v1_chr19_+_27194757_27194825	4.96049	AAGGCAC	ENSMUST00000047645.13|Vldlr|ENSMUSG00000024924.15|very low density lipoprotein receptor	ENSMUST00000167487.8|Vldlr|ENSMUSG00000024924.15|very low density lipoprotein receptor
mm39_v1_chr13_-_113755082_113755101	4.94419	AAGGCAC	ENSMUST00000109241.5|Snx18|ENSMUSG00000042364.12|sorting nexin 18
mm39_v1_chr16_+_14523696_14523722	4.92358	AAGGCAC	ENSMUST00000023356.8|Snai2|ENSMUSG00000022676.8|snail family zinc finger 2
mm39_v1_chr2_+_31840151_31840293	4.85062	AAGGCAC	ENSMUST00000001920.13|Aif1l|ENSMUSG00000001864.14|allograft inflammatory factor 1-like	ENSMUST00000151276.3|Aif1l|ENSMUSG00000001864.14|allograft inflammatory factor 1-like
mm39_v1_chr4_-_104967032_104967110	4.84146	AAGGCAC	ENSMUST00000030243.8|Prkaa2|ENSMUSG00000028518.9|protein kinase, AMP-activated, alpha 2 catalytic subunit
mm39_v1_chr2_+_165497157_165497273	4.83094	AAGGCAC	ENSMUST00000063433.8|Eya2|ENSMUSG00000017897.19|EYA transcriptional coactivator and phosphatase 2
mm39_v1_chr8_+_27575611_27575626	4.80349	AAGGCAC	ENSMUST00000178514.8|Adgra2|ENSMUSG00000031486.16|adhesion G protein-coupled receptor A2	ENSMUST00000033876.14|Adgra2|ENSMUSG00000031486.16|adhesion G protein-coupled receptor A2
mm39_v1_chr3_+_121220146_121220188	4.80211	AAGGCAC	ENSMUST00000029773.13|Cnn3|ENSMUSG00000053931.12|calponin 3, acidic
mm39_v1_chr9_+_118755521_118755636	4.78949	AAGGCAC	ENSMUST00000073109.12|Ctdspl|ENSMUSG00000047409.14|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
mm39_v1_chr7_-_132725075_132725107	4.76104	AAGGCAC	ENSMUST00000163601.8|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2	ENSMUST00000124096.8|Fgfr2|ENSMUSG00000030849.19|fibroblast growth factor receptor 2	ENSMUST00000033269.15|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2
mm39_v1_chr7_-_28661751_28661765	4.70994	AAGGCAC	ENSMUST00000068045.14|Actn4|ENSMUSG00000054808.16|actinin alpha 4	ENSMUST00000217157.2|Actn4|ENSMUSG00000054808.16|actinin alpha 4
mm39_v1_chr2_-_84481058_84481093	4.68891	AAGGCAC	ENSMUST00000111670.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111697.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111696.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111678.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111690.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111695.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111677.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111698.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000099941.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111676.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111694.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111675.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111689.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111687.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111692.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111685.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111686.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111688.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111693.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111684.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1
mm39_v1_chr3_+_89325750_89325879	4.67075	AAGGCAC	ENSMUST00000039110.12|Shc1|ENSMUSG00000042626.14|src homology 2 domain-containing transforming protein C1	ENSMUST00000125036.8|Shc1|ENSMUSG00000042626.14|src homology 2 domain-containing transforming protein C1	ENSMUST00000191485.7|Shc1|ENSMUSG00000042626.14|src homology 2 domain-containing transforming protein C1	ENSMUST00000154791.8|Shc1|ENSMUSG00000042626.14|src homology 2 domain-containing transforming protein C1
mm39_v1_chr3_-_102111892_102112009	4.60123	AAGGCAC	ENSMUST00000029453.13|Vangl1|ENSMUSG00000027860.16|VANGL planar cell polarity 1
mm39_v1_chr11_-_101357046_101357065	4.59713	AAGGCAC	ENSMUST00000040430.8|Vat1|ENSMUSG00000034993.8|vesicle amine transport 1
mm39_v1_chr2_+_13578738_13578840	4.59242	AAGGCAC	ENSMUST00000141365.3|Vim|ENSMUSG00000026728.10|vimentin	ENSMUST00000028062.8|Vim|ENSMUSG00000026728.10|vimentin
mm39_v1_chr5_+_145051025_145051088	4.53592	AAGGCAC	ENSMUST00000085679.13|Arpc1b|ENSMUSG00000029622.17|actin related protein 2/3 complex, subunit 1B
mm39_v1_chr6_-_50359797_50359829	4.519	AAGGCAC	ENSMUST00000114468.9|Osbpl3|ENSMUSG00000029822.16|oxysterol binding protein-like 3
mm39_v1_chr14_-_47426863_47426877	4.51388	AAGGCAC	ENSMUST00000089959.7|Gch1|ENSMUSG00000037580.11|GTP cyclohydrolase 1
mm39_v1_chr18_-_63520195_63520260	4.51011	AAGGCAC	ENSMUST00000047480.13|Piezo2|ENSMUSG00000041482.18|piezo-type mechanosensitive ion channel component 2
mm39_v1_chr6_-_127128007_127128023	4.50142	AAGGCAC	ENSMUST00000000188.12|Ccnd2|ENSMUSG00000000184.13|cyclin D2
mm39_v1_chr16_-_45664664_45664744	4.49643	AAGGCAC	ENSMUST00000036355.13|Phldb2|ENSMUSG00000033149.18|pleckstrin homology like domain, family B, member 2
mm39_v1_chr5_+_88868714_88868734	4.4911	AAGGCAC	ENSMUST00000113229.8|Mob1b|ENSMUSG00000006262.16|MOB kinase activator 1B	ENSMUST00000006424.8|Mob1b|ENSMUSG00000006262.16|MOB kinase activator 1B
mm39_v1_chr12_+_33003882_33003890	4.48746	AAGGCAC	ENSMUST00000076698.13|Sypl|ENSMUSG00000020570.16|synaptophysin-like protein
mm39_v1_chrX_+_98179725_98179744	4.48517	AAGGCAC	ENSMUST00000052839.7|Efnb1|ENSMUSG00000031217.9|ephrin B1
mm39_v1_chr2_-_150510116_150510178	4.48324	AAGGCAC	ENSMUST00000028944.4|Acss1|ENSMUSG00000027452.12|acyl-CoA synthetase short-chain family member 1
mm39_v1_chr13_-_111945499_111945552	4.46976	AAGGCAC	ENSMUST00000109267.9|Map3k1|ENSMUSG00000021754.18|mitogen-activated protein kinase kinase kinase 1
mm39_v1_chr10_-_93146937_93147024	4.45493	AAGGCAC	ENSMUST00000008542.12|Elk3|ENSMUSG00000008398.17|ELK3, member of ETS oncogene family
mm39_v1_chr17_-_84495364_84495381	4.45376	AAGGCAC	ENSMUST00000060366.7|Zfp36l2|ENSMUSG00000045817.9|zinc finger protein 36, C3H type-like 2
mm39_v1_chr15_+_88746380_88746396	4.44487	AAGGCAC	ENSMUST00000042818.11|Pim3|ENSMUSG00000035828.12|proviral integration site 3
mm39_v1_chr6_-_92920466_92920488	4.44234	AAGGCAC	ENSMUST00000113438.8|Adamts9|ENSMUSG00000030022.15|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9
mm39_v1_chr4_-_11007635_11007676	4.44208	AAGGCAC	ENSMUST00000054776.4|Plekhf2|ENSMUSG00000049969.4|pleckstrin homology domain containing, family F (with FYVE domain) member 2
mm39_v1_chr2_-_73360069_73360080	4.43863	AAGGCAC	ENSMUST00000094681.11|Wipf1|ENSMUSG00000075284.11|WAS/WASL interacting protein family, member 1
mm39_v1_chr3_-_84489783_84489841	4.43698	AAGGCAC	ENSMUST00000107687.9|Arfip1|ENSMUSG00000074513.10|ADP-ribosylation factor interacting protein 1	ENSMUST00000098990.10|Arfip1|ENSMUSG00000074513.10|ADP-ribosylation factor interacting protein 1
mm39_v1_chr14_-_118943591_118943648	4.42433	AAGGCAC	ENSMUST00000036554.14|Abcc4|ENSMUSG00000032849.15|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	ENSMUST00000166646.2|Abcc4|ENSMUSG00000032849.15|ATP-binding cassette, sub-family C (CFTR/MRP), member 4
mm39_v1_chr19_-_47452840_47452894	4.39551	AAGGCAC	ENSMUST00000081619.10|Sh3pxd2a|ENSMUSG00000053617.13|SH3 and PX domains 2A
mm39_v1_chr2_-_24825160_24825264	4.38683	AAGGCAC	ENSMUST00000102935.10|Arrdc1|ENSMUSG00000026972.16|arrestin domain containing 1	ENSMUST00000133934.2|Arrdc1|ENSMUSG00000026972.16|arrestin domain containing 1	ENSMUST00000028349.14|Arrdc1|ENSMUSG00000026972.16|arrestin domain containing 1
mm39_v1_chr16_+_4412546_4412599	4.37357	AAGGCAC	ENSMUST00000014447.13|Glis2|ENSMUSG00000014303.14|GLIS family zinc finger 2
mm39_v1_chr12_-_54842488_54842499	4.36431	AAGGCAC	ENSMUST00000005798.9|Snx6|ENSMUSG00000005656.10|sorting nexin 6
mm39_v1_chr15_-_77726333_77726375	4.36092	AAGGCAC	ENSMUST00000016771.13|Myh9|ENSMUSG00000022443.18|myosin, heavy polypeptide 9, non-muscle
mm39_v1_chr2_+_16361081_16361127	4.34708	AAGGCAC	ENSMUST00000028081.13|Plxdc2|ENSMUSG00000026748.14|plexin domain containing 2
mm39_v1_chr19_+_32597379_32597431	4.3328	AAGGCAC	ENSMUST00000236290.2|Papss2|ENSMUSG00000024899.8|3'-phosphoadenosine 5'-phosphosulfate synthase 2	ENSMUST00000025833.7|Papss2|ENSMUSG00000024899.8|3'-phosphoadenosine 5'-phosphosulfate synthase 2
mm39_v1_chr9_+_72952115_72952146	4.32132	AAGGCAC	ENSMUST00000184146.8|Rab27a|ENSMUSG00000032202.12|RAB27A, member RAS oncogene family	ENSMUST00000034722.5|Rab27a|ENSMUSG00000032202.12|RAB27A, member RAS oncogene family
mm39_v1_chr7_-_80052491_80052510	4.28024	AAGGCAC	ENSMUST00000122232.8|Furin|ENSMUSG00000030530.16|furin (paired basic amino acid cleaving enzyme)
mm39_v1_chr6_-_38853097_38853167	4.26233	AAGGCAC	ENSMUST00000161779.8|Hipk2|ENSMUSG00000061436.16|homeodomain interacting protein kinase 2
mm39_v1_chr10_-_121312212_121312252	4.25298	AAGGCAC	ENSMUST00000026902.9|Rassf3|ENSMUSG00000025795.9|Ras association (RalGDS/AF-6) domain family member 3
mm39_v1_chr19_+_16413126_16413126	4.24783	AAGGCAC	ENSMUST00000025602.4|Gna14|ENSMUSG00000024697.5|guanine nucleotide binding protein, alpha 14
mm39_v1_chr8_+_93687561_93687672	4.23729	AAGGCAC	ENSMUST00000072939.8|Slc6a2|ENSMUSG00000055368.15|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2
mm39_v1_chr4_-_59549314_59549364	4.22106	AAGGCAC	ENSMUST00000148331.9|Ptbp3|ENSMUSG00000028382.16|polypyrimidine tract binding protein 3	ENSMUST00000030076.12|Ptbp3|ENSMUSG00000028382.16|polypyrimidine tract binding protein 3
mm39_v1_chr8_+_129085719_129085787	4.21011	AAGGCAC	ENSMUST00000026917.10|Nrp1|ENSMUSG00000025810.10|neuropilin 1
mm39_v1_chr7_-_80453033_80453164	4.20742	AAGGCAC	ENSMUST00000167377.3|Iqgap1|ENSMUSG00000030536.11|IQ motif containing GTPase activating protein 1
mm39_v1_chr5_-_114829032_114829058	4.20392	AAGGCAC	ENSMUST00000012028.14|Gltp|ENSMUSG00000011884.14|glycolipid transfer protein
mm39_v1_chrX_+_138511360_138511408	4.18561	AAGGCAC	ENSMUST00000113026.2|Rnf128|ENSMUSG00000031438.12|ring finger protein 128
mm39_v1_chr3_+_101993731_101993763	4.14903	AAGGCAC	ENSMUST00000029454.12|Casq2|ENSMUSG00000027861.14|calsequestrin 2
mm39_v1_chr5_-_30360113_30360160	4.1186	AAGGCAC	ENSMUST00000156859.3|Hadha|ENSMUSG00000025745.13|hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha
mm39_v1_chrX_+_105070907_105070929	4.10654	AAGGCAC	ENSMUST00000055941.7|Atp7a|ENSMUSG00000033792.13|ATPase, Cu++ transporting, alpha polypeptide
mm39_v1_chr3_-_19365431_19365486	4.10088	AAGGCAC	ENSMUST00000099195.10|Pde7a|ENSMUSG00000069094.13|phosphodiesterase 7A
mm39_v1_chr18_-_66135683_66135714	4.03968	AAGGCAC	ENSMUST00000120461.9|Lman1|ENSMUSG00000041891.17|lectin, mannose-binding, 1	ENSMUST00000048260.15|Lman1|ENSMUSG00000041891.17|lectin, mannose-binding, 1	ENSMUST00000236866.2|Lman1|ENSMUSG00000041891.17|lectin, mannose-binding, 1
mm39_v1_chr3_+_37694094_37694229	4.03806	AAGGCAC	ENSMUST00000108109.8|Spry1|ENSMUSG00000037211.13|sprouty RTK signaling antagonist 1	ENSMUST00000038569.8|Spry1|ENSMUSG00000037211.13|sprouty RTK signaling antagonist 1	ENSMUST00000108107.2|Spry1|ENSMUSG00000037211.13|sprouty RTK signaling antagonist 1
mm39_v1_chr6_+_42222841_42222910	4.02989	AAGGCAC	ENSMUST00000031897.8|Gstk1|ENSMUSG00000029864.8|glutathione S-transferase kappa 1
mm39_v1_chr11_-_76737794_76737871	4.01325	AAGGCAC	ENSMUST00000021201.6|Cpd|ENSMUSG00000020841.6|carboxypeptidase D
mm39_v1_chr2_+_162773440_162773581	4.00319	AAGGCAC	ENSMUST00000130411.7|Srsf6|ENSMUSG00000016921.15|serine and arginine-rich splicing factor 6	ENSMUST00000126163.3|Srsf6|ENSMUSG00000016921.15|serine and arginine-rich splicing factor 6
mm39_v1_chr3_+_89427458_89427481	3.99245	AAGGCAC	ENSMUST00000000811.8|Kcnn3|ENSMUSG00000000794.10|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
mm39_v1_chr19_+_25214322_25214349	3.992	AAGGCAC	ENSMUST00000049400.15|Kank1|ENSMUSG00000032702.17|KN motif and ankyrin repeat domains 1
mm39_v1_chr18_+_75953244_75953308	3.9811	AAGGCAC	ENSMUST00000058997.15|Zbtb7c|ENSMUSG00000044646.16|zinc finger and BTB domain containing 7C
mm39_v1_chr8_+_107662352_107662410	3.95547	AAGGCAC	ENSMUST00000212524.2|Sntb2|ENSMUSG00000041308.7|syntrophin, basic 2	ENSMUST00000047425.5|Sntb2|ENSMUSG00000041308.7|syntrophin, basic 2
mm39_v1_chr2_-_142743438_142743530	3.92046	AAGGCAC	ENSMUST00000230763.2|Kif16b|ENSMUSG00000038844.11|kinesin family member 16B	ENSMUST00000043589.8|Kif16b|ENSMUSG00000038844.11|kinesin family member 16B
mm39_v1_chr10_+_58230183_58230202	3.91756	AAGGCAC	ENSMUST00000020077.11|Lims1|ENSMUSG00000019920.19|LIM and senescent cell antigen-like domains 1
mm39_v1_chr5_-_34345014_34345083	3.90761	AAGGCAC	ENSMUST00000042701.13|Mxd4|ENSMUSG00000037235.14|Max dimerization protein 4	ENSMUST00000119171.2|Mxd4|ENSMUSG00000037235.14|Max dimerization protein 4
mm39_v1_chr5_+_137015873_137015873	3.87166	AAGGCAC	ENSMUST00000004968.11|Plod3|ENSMUSG00000004846.11|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
mm39_v1_chr6_-_119394634_119394668	3.8676	AAGGCAC	ENSMUST00000032272.13|Adipor2|ENSMUSG00000030168.14|adiponectin receptor 2
mm39_v1_chr2_-_173118315_173118336	3.86481	AAGGCAC	ENSMUST00000036248.13|Pmepa1|ENSMUSG00000038400.16|prostate transmembrane protein, androgen induced 1
mm39_v1_chr1_-_21149392_21149467	3.83719	AAGGCAC	ENSMUST00000037998.6|Tram2|ENSMUSG00000041779.6|translocating chain-associating membrane protein 2
mm39_v1_chr4_+_137589548_137589559	3.81891	AAGGCAC	ENSMUST00000102518.10|Ece1|ENSMUSG00000057530.15|endothelin converting enzyme 1
mm39_v1_chr3_-_108053396_108053475	3.79954	AAGGCAC	ENSMUST00000000001.5|Gnai3|ENSMUSG00000000001.5|guanine nucleotide binding protein (G protein), alpha inhibiting 3
mm39_v1_chr2_-_104647041_104647138	3.79931	AAGGCAC	ENSMUST00000117237.2|Qser1|ENSMUSG00000074994.7|glutamine and serine rich 1	ENSMUST00000231375.2|Qser1|ENSMUSG00000074994.7|glutamine and serine rich 1
mm39_v1_chr19_-_55087849_55087925	3.7928	AAGGCAC	ENSMUST00000061856.6|Gpam|ENSMUSG00000024978.12|glycerol-3-phosphate acyltransferase, mitochondrial
mm39_v1_chr8_-_62355690_62355762	3.79173	AAGGCAC	ENSMUST00000121785.9|Palld|ENSMUSG00000058056.17|palladin, cytoskeletal associated protein	ENSMUST00000034057.14|Palld|ENSMUSG00000058056.17|palladin, cytoskeletal associated protein
mm39_v1_chr10_+_59159118_59159196	3.79108	AAGGCAC	ENSMUST00000009789.15|P4ha1|ENSMUSG00000019916.15|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide	ENSMUST00000092512.11|P4ha1|ENSMUSG00000019916.15|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide	ENSMUST00000105466.3|P4ha1|ENSMUSG00000019916.15|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide
mm39_v1_chr11_+_49684984_49685014	3.77575	AAGGCAC	ENSMUST00000020629.5|Gfpt2|ENSMUSG00000020363.7|glutamine fructose-6-phosphate transaminase 2
mm39_v1_chr5_-_147013384_147013401	3.75521	AAGGCAC	ENSMUST00000016664.8|Lnx2|ENSMUSG00000016520.8|ligand of numb-protein X 2
mm39_v1_chr13_+_38529062_38529117	3.75419	AAGGCAC	ENSMUST00000171970.3|Bmp6|ENSMUSG00000039004.7|bone morphogenetic protein 6
mm39_v1_chr13_-_103911092_103911139	3.75083	AAGGCAC	ENSMUST00000074616.7|Srek1|ENSMUSG00000032621.9|splicing regulatory glutamine/lysine-rich protein 1
mm39_v1_chr6_+_38410848_38410901	3.74703	AAGGCAC	ENSMUST00000160583.8|Ubn2|ENSMUSG00000038538.18|ubinuclein 2
mm39_v1_chr9_+_77824646_77824668	3.72117	AAGGCAC	ENSMUST00000034904.14|Elovl5|ENSMUSG00000032349.14|ELOVL family member 5, elongation of long chain fatty acids (yeast)
mm39_v1_chr14_+_56091454_56091493	3.70102	AAGGCAC	ENSMUST00000227465.2|Nynrin|ENSMUSG00000075592.11|NYN domain and retroviral integrase containing	ENSMUST00000168479.3|Nynrin|ENSMUSG00000075592.11|NYN domain and retroviral integrase containing	ENSMUST00000100529.10|Nynrin|ENSMUSG00000075592.11|NYN domain and retroviral integrase containing
mm39_v1_chr5_+_64250268_64250327	3.68496	AAGGCAC	ENSMUST00000087324.7|Pgm2|ENSMUSG00000029171.13|phosphoglucomutase 2
mm39_v1_chr18_+_84106188_84106305	3.68207	AAGGCAC	ENSMUST00000060223.4|Zadh2|ENSMUSG00000049090.4|zinc binding alcohol dehydrogenase, domain containing 2
mm39_v1_chr8_-_127201801_127201837	3.66904	AAGGCAC	ENSMUST00000170518.3|Tarbp1|ENSMUSG00000090290.3|TAR RNA binding protein 1
mm39_v1_chr2_-_152185901_152185955	3.65915	AAGGCAC	ENSMUST00000040312.7|Trib3|ENSMUSG00000032715.10|tribbles pseudokinase 3
mm39_v1_chr3_-_87081939_87082054	3.65801	AAGGCAC	ENSMUST00000159976.8|Kirrel|ENSMUSG00000041734.16|kirre like nephrin family adhesion molecule 1	ENSMUST00000107618.9|Kirrel|ENSMUSG00000041734.16|kirre like nephrin family adhesion molecule 1
mm39_v1_chr4_-_40853950_40854022	3.65322	AAGGCAC	ENSMUST00000030121.13|B4galt1|ENSMUSG00000028413.14|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1	ENSMUST00000108096.3|B4galt1|ENSMUSG00000028413.14|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
mm39_v1_chr2_-_118380149_118380168	3.60609	AAGGCAC	ENSMUST00000090219.13|Bmf|ENSMUSG00000040093.17|BCL2 modifying factor
mm39_v1_chr9_-_31824758_31824779	3.59746	AAGGCAC	ENSMUST00000116615.5|Barx2|ENSMUSG00000032033.12|BarH-like homeobox 2
mm39_v1_chrX_-_51254129_51254157	3.58281	AAGGCAC	ENSMUST00000033450.3|Gpc4|ENSMUSG00000031119.5|glypican 4
mm39_v1_chr10_+_21870565_21870591	3.57015	AAGGCAC	ENSMUST00000020145.12|Sgk1|ENSMUSG00000019970.16|serum/glucocorticoid regulated kinase 1
mm39_v1_chr4_+_129181407_129181437	3.54022	AAGGCAC	ENSMUST00000102599.4|Sync|ENSMUSG00000001333.10|syncoilin
mm39_v1_chr4_+_62204678_62204754	3.53625	AAGGCAC	ENSMUST00000084530.9|Slc31a2|ENSMUSG00000066152.12|solute carrier family 31, member 2
mm39_v1_chr11_+_55360502_55360543	3.52982	AAGGCAC	ENSMUST00000018727.4|G3bp1|ENSMUSG00000018583.6|GTPase activating protein (SH3 domain) binding protein 1
mm39_v1_chr7_-_65020955_65021041	3.51754	AAGGCAC	ENSMUST00000102592.10|Tjp1|ENSMUSG00000030516.15|tight junction protein 1
mm39_v1_chr12_+_111005768_111005834	3.47766	AAGGCAC	ENSMUST00000084968.14|Rcor1|ENSMUSG00000037896.18|REST corepressor 1
mm39_v1_chr10_+_79690452_79690476	3.47615	AAGGCAC	ENSMUST00000165704.8|Ptbp1|ENSMUSG00000006498.17|polypyrimidine tract binding protein 1
mm39_v1_chr11_+_44508137_44508169	3.46306	AAGGCAC	ENSMUST00000109268.2|Ebf1|ENSMUSG00000057098.15|early B cell factor 1	ENSMUST00000101326.10|Ebf1|ENSMUSG00000057098.15|early B cell factor 1	ENSMUST00000081265.12|Ebf1|ENSMUSG00000057098.15|early B cell factor 1
mm39_v1_chr19_-_6065872_6065927	3.44279	AAGGCAC	ENSMUST00000164843.10|Capn1|ENSMUSG00000024942.20|calpain 1
mm39_v1_chr15_+_25622611_25622644	3.4404	AAGGCAC	ENSMUST00000110457.8|Myo10|ENSMUSG00000022272.18|myosin X	ENSMUST00000137601.8|Myo10|ENSMUSG00000022272.18|myosin X
mm39_v1_chr1_-_191129223_191129263	3.43564	AAGGCAC	ENSMUST00000067976.9|Ppp2r5a|ENSMUSG00000026626.12|protein phosphatase 2, regulatory subunit B', alpha
mm39_v1_chr6_-_39702381_39702413	3.43398	AAGGCAC	ENSMUST00000002487.15|Braf|ENSMUSG00000002413.16|Braf transforming gene
mm39_v1_chr5_-_66775979_66776056	3.43248	AAGGCAC	ENSMUST00000162382.8|Apbb2|ENSMUSG00000029207.17|amyloid beta (A4) precursor protein-binding, family B, member 2	ENSMUST00000159786.8|Apbb2|ENSMUSG00000029207.17|amyloid beta (A4) precursor protein-binding, family B, member 2	ENSMUST00000162349.8|Apbb2|ENSMUSG00000029207.17|amyloid beta (A4) precursor protein-binding, family B, member 2	ENSMUST00000087256.12|Apbb2|ENSMUSG00000029207.17|amyloid beta (A4) precursor protein-binding, family B, member 2	ENSMUST00000160103.8|Apbb2|ENSMUSG00000029207.17|amyloid beta (A4) precursor protein-binding, family B, member 2	ENSMUST00000160870.8|Apbb2|ENSMUSG00000029207.17|amyloid beta (A4) precursor protein-binding, family B, member 2
mm39_v1_chr10_-_13350106_13350185	3.42566	AAGGCAC	ENSMUST00000105545.12|Phactr2|ENSMUSG00000062866.17|phosphatase and actin regulator 2
mm39_v1_chr5_+_73071607_73071647	3.4248	AAGGCAC	ENSMUST00000144843.8|Slain2|ENSMUSG00000036087.19|SLAIN motif family, member 2
mm39_v1_chr2_-_60793536_60793595	3.42423	AAGGCAC	ENSMUST00000028347.13|Rbms1|ENSMUSG00000026970.17|RNA binding motif, single stranded interacting protein 1
mm39_v1_chr4_-_155306992_155307049	3.41251	AAGGCAC	ENSMUST00000084103.10|Ski|ENSMUSG00000029050.16|ski sarcoma viral oncogene homolog (avian)	ENSMUST00000030917.6|Ski|ENSMUSG00000029050.16|ski sarcoma viral oncogene homolog (avian)
mm39_v1_chr15_-_73056713_73056822	3.40657	AAGGCAC	ENSMUST00000044113.12|Ago2|ENSMUSG00000036698.12|argonaute RISC catalytic subunit 2
mm39_v1_chr11_+_118913788_118913932	3.37525	AAGGCAC	ENSMUST00000026662.8|Cbx2|ENSMUSG00000025577.8|chromobox 2
mm39_v1_chr12_+_116244792_116244855	3.36533	AAGGCAC	ENSMUST00000100986.4|Esyt2|ENSMUSG00000021171.9|extended synaptotagmin-like protein 2	ENSMUST00000220816.2|Esyt2|ENSMUSG00000021171.9|extended synaptotagmin-like protein 2
mm39_v1_chr12_+_80837284_80837348	3.3609	AAGGCAC	ENSMUST00000220238.2|Susd6|ENSMUSG00000021133.10|sushi domain containing 6	ENSMUST00000068519.7|Susd6|ENSMUSG00000021133.10|sushi domain containing 6
mm39_v1_chr3_-_131138541_131138589	3.33476	AAGGCAC	ENSMUST00000090246.5|Sgms2|ENSMUSG00000050931.8|sphingomyelin synthase 2	ENSMUST00000126569.2|Sgms2|ENSMUSG00000050931.8|sphingomyelin synthase 2
mm39_v1_chr12_+_112112621_112112657	3.32347	AAGGCAC	ENSMUST00000128402.3|Kif26a|ENSMUSG00000021294.8|kinesin family member 26A
mm39_v1_chr3_+_122522592_122522652	3.32091	AAGGCAC	ENSMUST00000066728.10|Pde5a|ENSMUSG00000053965.11|phosphodiesterase 5A, cGMP-specific
mm39_v1_chrX_-_105055486_105055512	3.31754	AAGGCAC	ENSMUST00000238718.2|Magt1|ENSMUSG00000031232.18|magnesium transporter 1	ENSMUST00000033583.14|Magt1|ENSMUSG00000031232.18|magnesium transporter 1	ENSMUST00000151689.9|Magt1|ENSMUSG00000031232.18|magnesium transporter 1
mm39_v1_chr1_-_120198804_120198815	3.30356	AAGGCAC	ENSMUST00000112641.8|Steap3|ENSMUSG00000026389.17|STEAP family member 3
mm39_v1_chr10_-_60983438_60983482	3.27948	AAGGCAC	ENSMUST00000092498.12|Sgpl1|ENSMUSG00000020097.15|sphingosine phosphate lyase 1	ENSMUST00000137833.2|Sgpl1|ENSMUSG00000020097.15|sphingosine phosphate lyase 1	ENSMUST00000155919.8|Sgpl1|ENSMUSG00000020097.15|sphingosine phosphate lyase 1
mm39_v1_chr18_+_84869456_84869473	3.2493	AAGGCAC	ENSMUST00000160180.9|Cyb5a|ENSMUSG00000024646.15|cytochrome b5 type A (microsomal)
mm39_v1_chr1_-_98023321_98023373	3.22382	AAGGCAC	ENSMUST00000058762.15|Pam|ENSMUSG00000026335.17|peptidylglycine alpha-amidating monooxygenase	ENSMUST00000097625.10|Pam|ENSMUSG00000026335.17|peptidylglycine alpha-amidating monooxygenase
mm39_v1_chr18_-_73836810_73836877	3.22073	AAGGCAC	ENSMUST00000025393.14|Smad4|ENSMUSG00000024515.14|SMAD family member 4
mm39_v1_chr4_-_56947411_56947448	3.2175	AAGGCAC	ENSMUST00000107609.4|Tmem245|ENSMUSG00000055296.15|transmembrane protein 245	ENSMUST00000068792.13|Tmem245|ENSMUSG00000055296.15|transmembrane protein 245
mm39_v1_chr11_+_87959067_87959115	3.21549	AAGGCAC	ENSMUST00000018521.11|Vezf1|ENSMUSG00000018377.11|vascular endothelial zinc finger 1
mm39_v1_chr7_-_121620366_121620445	3.21282	AAGGCAC	ENSMUST00000033160.15|Gga2|ENSMUSG00000030872.15|golgi associated, gamma adaptin ear containing, ARF binding protein 2
mm39_v1_chr15_+_102314809_102314833	3.21168	AAGGCAC	ENSMUST00000001326.7|Sp1|ENSMUSG00000001280.14|trans-acting transcription factor 1
mm39_v1_chr16_-_10810964_10810985	3.20514	AAGGCAC	ENSMUST00000023143.14|Litaf|ENSMUSG00000022500.16|LPS-induced TN factor
mm39_v1_chr8_+_35842872_35842920	3.1785	AAGGCAC	ENSMUST00000210337.2|Ppp1r3b|ENSMUSG00000046794.10|protein phosphatase 1, regulatory subunit 3B	ENSMUST00000070481.8|Ppp1r3b|ENSMUSG00000046794.10|protein phosphatase 1, regulatory subunit 3B	ENSMUST00000211648.2|Ppp1r3b|ENSMUSG00000046794.10|protein phosphatase 1, regulatory subunit 3B
mm39_v1_chr7_+_45084257_45084295	3.17273	AAGGCAC	ENSMUST00000003964.17|Gys1|ENSMUSG00000003865.17|glycogen synthase 1, muscle
mm39_v1_chr17_-_74601769_74601801	3.1558	AAGGCAC	ENSMUST00000078459.8|Memo1|ENSMUSG00000058704.10|mediator of cell motility 1	ENSMUST00000232989.2|Memo1|ENSMUSG00000058704.10|mediator of cell motility 1
mm39_v1_chr6_-_137626207_137626298	3.15549	AAGGCAC	ENSMUST00000134630.6|Eps8|ENSMUSG00000015766.15|epidermal growth factor receptor pathway substrate 8	ENSMUST00000058210.13|Eps8|ENSMUSG00000015766.15|epidermal growth factor receptor pathway substrate 8	ENSMUST00000111878.8|Eps8|ENSMUSG00000015766.15|epidermal growth factor receptor pathway substrate 8
mm39_v1_chr18_-_79152504_79152606	3.15518	AAGGCAC	ENSMUST00000025430.11|Setbp1|ENSMUSG00000024548.12|SET binding protein 1
mm39_v1_chr9_-_79625800_79625854	3.15506	AAGGCAC	ENSMUST00000071750.13|Col12a1|ENSMUSG00000032332.18|collagen, type XII, alpha 1
mm39_v1_chr13_-_53531391_53531433	3.14564	AAGGCAC	ENSMUST00000021920.8|Sptlc1|ENSMUSG00000021468.9|serine palmitoyltransferase, long chain base subunit 1
mm39_v1_chr15_-_98505508_98505519	3.13134	AAGGCAC	ENSMUST00000096224.6|Adcy6|ENSMUSG00000022994.10|adenylate cyclase 6
mm39_v1_chr7_+_65511777_65511888	3.12871	AAGGCAC	ENSMUST00000055576.12|Pcsk6|ENSMUSG00000030513.15|proprotein convertase subtilisin/kexin type 6	ENSMUST00000098391.11|Pcsk6|ENSMUSG00000030513.15|proprotein convertase subtilisin/kexin type 6
mm39_v1_chr13_-_43713583_43713707	3.12409	AAGGCAC	ENSMUST00000021800.6|Mcur1|ENSMUSG00000021371.6|mitochondrial calcium uniporter regulator 1
mm39_v1_chr4_+_123798625_123798643	3.12346	AAGGCAC	ENSMUST00000030400.14|Mycbp|ENSMUSG00000028647.14|MYC binding protein
mm39_v1_chr3_-_115800989_115801060	3.1115	AAGGCAC	ENSMUST00000067485.4|Slc30a7|ENSMUSG00000054414.5|solute carrier family 30 (zinc transporter), member 7
mm39_v1_chr11_-_106811507_106811599	3.10875	AAGGCAC	ENSMUST00000103067.10|Smurf2|ENSMUSG00000018363.17|SMAD specific E3 ubiquitin protein ligase 2
mm39_v1_chr13_-_74465353_74465440	3.09765	AAGGCAC	ENSMUST00000022060.7|Pdcd6|ENSMUSG00000021576.7|programmed cell death 6
mm39_v1_chr16_+_42727926_42728047	3.08823	AAGGCAC	ENSMUST00000151244.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20	ENSMUST00000114694.9|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chr2_+_71617266_71617322	3.06526	AAGGCAC	ENSMUST00000112101.8|Itga6|ENSMUSG00000027111.17|integrin alpha 6	ENSMUST00000028522.10|Itga6|ENSMUSG00000027111.17|integrin alpha 6
mm39_v1_chr11_+_95603494_95603529	3.057	AAGGCAC	ENSMUST00000107717.8|Zfp652|ENSMUSG00000075595.10|zinc finger protein 652
mm39_v1_chr10_-_18421796_18421839	3.03718	AAGGCAC	ENSMUST00000214548.2|Hebp2|ENSMUSG00000019853.7|heme binding protein 2	ENSMUST00000020000.7|Hebp2|ENSMUSG00000019853.7|heme binding protein 2
mm39_v1_chr12_-_85421467_85421621	3.01928	AAGGCAC	ENSMUST00000040766.9|Tmed10|ENSMUSG00000021248.10|transmembrane p24 trafficking protein 10
mm39_v1_chr9_-_122942196_122942280	3.016	AAGGCAC	ENSMUST00000238520.2|Zdhhc3|ENSMUSG00000025786.18|zinc finger, DHHC domain containing 3	ENSMUST00000147563.9|Zdhhc3|ENSMUSG00000025786.18|zinc finger, DHHC domain containing 3
mm39_v1_chr7_+_65759198_65759263	3.00938	AAGGCAC	ENSMUST00000036372.8|Chsy1|ENSMUSG00000032640.11|chondroitin sulfate synthase 1
mm39_v1_chr12_-_80159768_80159793	2.99796	AAGGCAC	ENSMUST00000219642.2|Zfp36l1|ENSMUSG00000021127.8|zinc finger protein 36, C3H type-like 1	ENSMUST00000165114.2|Zfp36l1|ENSMUSG00000021127.8|zinc finger protein 36, C3H type-like 1	ENSMUST00000218835.2|Zfp36l1|ENSMUSG00000021127.8|zinc finger protein 36, C3H type-like 1	ENSMUST00000021552.3|Zfp36l1|ENSMUSG00000021127.8|zinc finger protein 36, C3H type-like 1
mm39_v1_chr8_+_110944575_110944637	2.99321	AAGGCAC	ENSMUST00000056972.6|Cmtr2|ENSMUSG00000046441.6|cap methyltransferase 2
mm39_v1_chr11_-_50183129_50183191	2.99276	AAGGCAC	ENSMUST00000059458.5|Maml1|ENSMUSG00000050567.17|mastermind like transcriptional coactivator 1
mm39_v1_chr2_-_34803988_34804055	2.97374	AAGGCAC	ENSMUST00000028232.7|Phf19|ENSMUSG00000026873.10|PHD finger protein 19	ENSMUST00000202907.2|Phf19|ENSMUSG00000026873.10|PHD finger protein 19
mm39_v1_chr13_-_89890609_89890634	2.95005	AAGGCAC	ENSMUST00000109546.9|Vcan|ENSMUSG00000021614.17|versican
mm39_v1_chr7_+_49559859_49559894	2.94305	AAGGCAC	ENSMUST00000056442.12|Slc6a5|ENSMUSG00000039728.16|solute carrier family 6 (neurotransmitter transporter, glycine), member 5
mm39_v1_chr10_-_128640232_128640274	2.90298	AAGGCAC	ENSMUST00000051011.14|Tmem198b|ENSMUSG00000047090.14|transmembrane protein 198b
mm39_v1_chr6_-_97594498_97594558	2.88629	AAGGCAC	ENSMUST00000113355.9|Frmd4b|ENSMUSG00000030064.17|FERM domain containing 4B
mm39_v1_chr1_-_72323464_72323473	2.86828	AAGGCAC	ENSMUST00000027381.13|Pecr|ENSMUSG00000026189.14|peroxisomal trans-2-enoyl-CoA reductase
mm39_v1_chr9_-_21829385_21829488	2.8563	AAGGCAC	ENSMUST00000128442.2|Rab3d|ENSMUSG00000019066.14|RAB3D, member RAS oncogene family	ENSMUST00000119055.8|Rab3d|ENSMUSG00000019066.14|RAB3D, member RAS oncogene family	ENSMUST00000122211.8|Rab3d|ENSMUSG00000019066.14|RAB3D, member RAS oncogene family	ENSMUST00000115351.10|Rab3d|ENSMUSG00000019066.14|RAB3D, member RAS oncogene family
mm39_v1_chr9_-_32452885_32452898	2.83748	AAGGCAC	ENSMUST00000016231.14|Fli1|ENSMUSG00000016087.14|Friend leukemia integration 1
mm39_v1_chr15_+_32244947_32244982	2.83174	AAGGCAC	ENSMUST00000067458.7|Sema5a|ENSMUSG00000022231.11|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
mm39_v1_chr12_+_108758871_108758914	2.8266	AAGGCAC	ENSMUST00000021692.9|Yy1|ENSMUSG00000021264.13|YY1 transcription factor
mm39_v1_chr15_-_79287747_79287778	2.80947	AAGGCAC	ENSMUST00000074991.10|Tmem184b|ENSMUSG00000009035.16|transmembrane protein 184b
mm39_v1_chr9_-_119151428_119151517	2.80346	AAGGCAC	ENSMUST00000040853.11|Oxsr1|ENSMUSG00000036737.13|oxidative-stress responsive 1
mm39_v1_chr2_-_140513382_140513399	2.80087	AAGGCAC	ENSMUST00000110057.3|Flrt3|ENSMUSG00000051379.13|fibronectin leucine rich transmembrane protein 3
mm39_v1_chr19_+_5687503_5687514	2.79422	AAGGCAC	ENSMUST00000025867.6|Rela|ENSMUSG00000024927.9|v-rel reticuloendotheliosis viral oncogene homolog A (avian)
mm39_v1_chr7_+_78922947_78922973	2.79352	AAGGCAC	ENSMUST00000037315.13|Abhd2|ENSMUSG00000039202.13|abhydrolase domain containing 2
mm39_v1_chr5_-_21260878_21260960	2.79237	AAGGCAC	ENSMUST00000030556.8|Ptpn12|ENSMUSG00000028771.14|protein tyrosine phosphatase, non-receptor type 12
mm39_v1_chr10_+_94350687_94350784	2.78337	AAGGCAC	ENSMUST00000065060.12|Tmcc3|ENSMUSG00000020023.19|transmembrane and coiled coil domains 3
mm39_v1_chr19_-_3625698_3625756	2.77766	AAGGCAC	ENSMUST00000172362.3|Ppp6r3|ENSMUSG00000024908.16|protein phosphatase 6, regulatory subunit 3	ENSMUST00000025846.16|Ppp6r3|ENSMUSG00000024908.16|protein phosphatase 6, regulatory subunit 3	ENSMUST00000226109.2|Ppp6r3|ENSMUSG00000024908.16|protein phosphatase 6, regulatory subunit 3	ENSMUST00000113997.9|Ppp6r3|ENSMUSG00000024908.16|protein phosphatase 6, regulatory subunit 3
mm39_v1_chr1_-_13062873_13062892	2.76974	AAGGCAC	ENSMUST00000188454.7|Slco5a1|ENSMUSG00000025938.17|solute carrier organic anion transporter family, member 5A1
mm39_v1_chr2_-_168608949_168608965	2.7624	AAGGCAC	ENSMUST00000075044.10|Sall4|ENSMUSG00000027547.18|spalt like transcription factor 4
mm39_v1_chr15_-_50753061_50753118	2.75373	AAGGCAC	ENSMUST00000165201.9|Trps1|ENSMUSG00000038679.17|transcriptional repressor GATA binding 1	ENSMUST00000184458.8|Trps1|ENSMUSG00000038679.17|transcriptional repressor GATA binding 1
mm39_v1_chr11_-_70111796_70111890	2.75216	AAGGCAC	ENSMUST00000060010.3|Slc16a13|ENSMUSG00000044367.8|solute carrier family 16 (monocarboxylic acid transporters), member 13	ENSMUST00000190533.2|Slc16a13|ENSMUSG00000044367.8|solute carrier family 16 (monocarboxylic acid transporters), member 13
mm39_v1_chr1_+_62742444_62742511	2.74819	AAGGCAC	ENSMUST00000102822.9|Nrp2|ENSMUSG00000025969.16|neuropilin 2	ENSMUST00000075144.12|Nrp2|ENSMUSG00000025969.16|neuropilin 2
mm39_v1_chr12_-_4957705_4957754	2.74679	AAGGCAC	ENSMUST00000020962.12|Ubxn2a|ENSMUSG00000020634.13|UBX domain protein 2A
mm39_v1_chr4_-_134495234_134495335	2.74548	AAGGCAC	ENSMUST00000037828.8|Ldlrap1|ENSMUSG00000037295.8|low density lipoprotein receptor adaptor protein 1
mm39_v1_chr14_-_110992533_110992584	2.72939	AAGGCAC	ENSMUST00000078386.4|Slitrk6|ENSMUSG00000045871.6|SLIT and NTRK-like family, member 6
mm39_v1_chr3_-_108819003_108819062	2.7289	AAGGCAC	ENSMUST00000029480.9|Prpf38b|ENSMUSG00000027881.15|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
mm39_v1_chr2_+_155223728_155223804	2.72713	AAGGCAC	ENSMUST00000043237.14|Trp53inp2|ENSMUSG00000038375.16|transformation related protein 53 inducible nuclear protein 2	ENSMUST00000174685.8|Trp53inp2|ENSMUSG00000038375.16|transformation related protein 53 inducible nuclear protein 2
mm39_v1_chr1_+_92838479_92838505	2.72626	AAGGCAC	ENSMUST00000027487.15|Rnpepl1|ENSMUSG00000026269.15|arginyl aminopeptidase (aminopeptidase B)-like 1
mm39_v1_chr18_-_10182007_10182092	2.7184	AAGGCAC	ENSMUST00000067947.7|Rock1|ENSMUSG00000024290.10|Rho-associated coiled-coil containing protein kinase 1
mm39_v1_chr6_+_115751499_115751570	2.70219	AAGGCAC	ENSMUST00000075995.7|Cand2|ENSMUSG00000030319.9|cullin-associated and neddylation-dissociated 2 (putative)
mm39_v1_chr1_+_178014983_178015280	2.67916	AAGGCAC	ENSMUST00000161075.8|Desi2|ENSMUSG00000026502.14|desumoylating isopeptidase 2	ENSMUST00000027783.14|Desi2|ENSMUSG00000026502.14|desumoylating isopeptidase 2
mm39_v1_chrX_+_13147209_13147270	2.6698	AAGGCAC	ENSMUST00000000804.7|Ddx3x|ENSMUSG00000000787.13|DEAD box helicase 3, X-linked
mm39_v1_chr14_+_25694594_25694657	2.65613	AAGGCAC	ENSMUST00000022419.7|Ppif|ENSMUSG00000021868.8|peptidylprolyl isomerase F (cyclophilin F)
mm39_v1_chr4_-_43562397_43562438	2.65524	AAGGCAC	ENSMUST00000030187.14|Tln1|ENSMUSG00000028465.17|talin 1
mm39_v1_chr13_-_96028412_96028503	2.65523	AAGGCAC	ENSMUST00000068603.8|Iqgap2|ENSMUSG00000021676.11|IQ motif containing GTPase activating protein 2
mm39_v1_chr9_-_107512566_107512584	2.63802	AAGGCAC	ENSMUST00000055704.12|Gnai2|ENSMUSG00000032562.14|guanine nucleotide binding protein (G protein), alpha inhibiting 2
mm39_v1_chr18_+_9212154_9212171	2.63303	AAGGCAC	ENSMUST00000041080.7|Fzd8|ENSMUSG00000036904.7|frizzled class receptor 8
mm39_v1_chr7_-_67022520_67022609	2.6311	AAGGCAC	ENSMUST00000156690.8|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A	ENSMUST00000107476.8|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A	ENSMUST00000076325.12|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A	ENSMUST00000032776.15|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A	ENSMUST00000133074.2|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A
mm39_v1_chr9_-_117081518_117081557	2.62877	AAGGCAC	ENSMUST00000111773.10|Rbms3|ENSMUSG00000039607.18|RNA binding motif, single stranded interacting protein	ENSMUST00000068962.14|Rbms3|ENSMUSG00000039607.18|RNA binding motif, single stranded interacting protein	ENSMUST00000044901.14|Rbms3|ENSMUSG00000039607.18|RNA binding motif, single stranded interacting protein
mm39_v1_chr8_+_79235946_79236030	2.62638	AAGGCAC	ENSMUST00000209490.2|Slc10a7|ENSMUSG00000031684.12|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	ENSMUST00000034111.10|Slc10a7|ENSMUSG00000031684.12|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
mm39_v1_chr15_+_85619958_85620010	2.62579	AAGGCAC	ENSMUST00000109422.8|Ppara|ENSMUSG00000022383.14|peroxisome proliferator activated receptor alpha
mm39_v1_chr4_-_151142351_151142444	2.62171	AAGGCAC	ENSMUST00000030797.4|Vamp3|ENSMUSG00000028955.4|vesicle-associated membrane protein 3
mm39_v1_chr19_+_4264292_4264417	2.61271	AAGGCAC	ENSMUST00000046506.7|Clcf1|ENSMUSG00000040663.10|cardiotrophin-like cytokine factor 1
mm39_v1_chr1_-_69724939_69724987	2.60636	AAGGCAC	ENSMUST00000027146.9|Ikzf2|ENSMUSG00000025997.14|IKAROS family zinc finger 2
mm39_v1_chr8_+_127790772_127791097	2.60016	AAGGCAC	ENSMUST00000079777.12|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000160272.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162907.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162536.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000026921.13|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162665.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162602.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000160581.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000161355.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162531.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000160766.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000159537.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator
mm39_v1_chr6_+_7844759_7844859	2.59962	AAGGCAC	ENSMUST00000040159.6|C1galt1|ENSMUSG00000042460.6|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
mm39_v1_chr11_-_53782462_53782486	2.59305	AAGGCAC	ENSMUST00000019044.8|Slc22a5|ENSMUSG00000018900.8|solute carrier family 22 (organic cation transporter), member 5
mm39_v1_chr1_+_118555668_118555686	2.56842	AAGGCAC	ENSMUST00000027629.10|Tfcp2l1|ENSMUSG00000026380.11|transcription factor CP2-like 1
mm39_v1_chr5_+_53206688_53206705	2.56383	AAGGCAC	ENSMUST00000094787.8|Slc34a2|ENSMUSG00000029188.15|solute carrier family 34 (sodium phosphate), member 2
mm39_v1_chr4_-_130169006_130169021	2.56361	AAGGCAC	ENSMUST00000122374.8|Serinc2|ENSMUSG00000023232.18|serine incorporator 2
mm39_v1_chr9_+_108539296_108539418	2.55822	AAGGCAC	ENSMUST00000035222.6|Slc25a20|ENSMUSG00000032602.7|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20
mm39_v1_chrX_+_97981352_97981402	2.55748	AAGGCAC	ENSMUST00000054697.7|Yipf6|ENSMUSG00000047694.13|Yip1 domain family, member 6
mm39_v1_chr6_-_37419030_37419117	2.55125	AAGGCAC	ENSMUST00000041093.6|Creb3l2|ENSMUSG00000038648.6|cAMP responsive element binding protein 3-like 2
mm39_v1_chr1_-_156501860_156501926	2.54703	AAGGCAC	ENSMUST00000188964.7|Tor3a|ENSMUSG00000060519.12|torsin family 3, member A	ENSMUST00000190607.2|Tor3a|ENSMUSG00000060519.12|torsin family 3, member A	ENSMUST00000079625.11|Tor3a|ENSMUSG00000060519.12|torsin family 3, member A
mm39_v1_chr9_+_65121944_65121984	2.53599	AAGGCAC	ENSMUST00000069000.9|Parp16|ENSMUSG00000032392.12|poly (ADP-ribose) polymerase family, member 16
mm39_v1_chr3_-_58433313_58433318	2.53019	AAGGCAC	ENSMUST00000029385.9|Serp1|ENSMUSG00000027808.9|stress-associated endoplasmic reticulum protein 1
mm39_v1_chr9_+_96078340_96078406	2.51902	AAGGCAC	ENSMUST00000034982.16|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000188008.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000188750.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000185644.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2
mm39_v1_chr10_+_126814542_126814618	2.5025	AAGGCAC	ENSMUST00000105256.10|Ctdsp2|ENSMUSG00000078429.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
mm39_v1_chr13_+_45543208_45543226	2.50126	AAGGCAC	ENSMUST00000038275.11|Mylip|ENSMUSG00000038175.11|myosin regulatory light chain interacting protein
mm39_v1_chr4_+_139350152_139350213	2.4999	AAGGCAC	ENSMUST00000039818.10|Aldh4a1|ENSMUSG00000028737.16|aldehyde dehydrogenase 4 family, member A1
mm39_v1_chr1_-_165021879_165022007	2.49682	AAGGCAC	ENSMUST00000043338.10|Sft2d2|ENSMUSG00000040848.12|SFT2 domain containing 2
mm39_v1_chr19_-_29625755_29625825	2.49491	AAGGCAC	ENSMUST00000159692.8|Ermp1|ENSMUSG00000046324.13|endoplasmic reticulum metallopeptidase 1
mm39_v1_chr7_-_116042674_116042698	2.49306	AAGGCAC	ENSMUST00000170430.3|Pik3c2a|ENSMUSG00000030660.10|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha	ENSMUST00000206219.2|Pik3c2a|ENSMUSG00000030660.10|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha
mm39_v1_chr17_+_27276262_27276308	2.48244	AAGGCAC	ENSMUST00000049308.9|Itpr3|ENSMUSG00000042644.10|inositol 1,4,5-triphosphate receptor 3
mm39_v1_chr10_+_41395410_41395443	2.47863	AAGGCAC	ENSMUST00000019962.15|Cd164|ENSMUSG00000019818.16|CD164 antigen
mm39_v1_chr11_+_69737437_69737476	2.46998	AAGGCAC	ENSMUST00000152566.8|Plscr3|ENSMUSG00000019461.13|phospholipid scramblase 3	ENSMUST00000108633.9|Plscr3|ENSMUSG00000019461.13|phospholipid scramblase 3
mm39_v1_chr1_-_54965470_54965561	2.46004	AAGGCAC	ENSMUST00000179030.8|Ankrd44|ENSMUSG00000052331.15|ankyrin repeat domain 44	ENSMUST00000044359.16|Ankrd44|ENSMUSG00000052331.15|ankyrin repeat domain 44
mm39_v1_chr6_-_134543876_134543959	2.44678	AAGGCAC	ENSMUST00000032322.15|Lrp6|ENSMUSG00000030201.16|low density lipoprotein receptor-related protein 6	ENSMUST00000126836.4|Lrp6|ENSMUSG00000030201.16|low density lipoprotein receptor-related protein 6
mm39_v1_chr2_+_153583194_153583214	2.43803	AAGGCAC	ENSMUST00000028981.9|Mapre1|ENSMUSG00000027479.15|microtubule-associated protein, RP/EB family, member 1
mm39_v1_chr1_-_182345011_182345090	2.43455	AAGGCAC	ENSMUST00000068505.10|Capn2|ENSMUSG00000026509.16|calpain 2
mm39_v1_chr8_-_8711211_8711250	2.43347	AAGGCAC	ENSMUST00000001319.15|Efnb2|ENSMUSG00000001300.17|ephrin B2
mm39_v1_chr2_-_144112700_144112826	2.42396	AAGGCAC	ENSMUST00000110030.10|Snx5|ENSMUSG00000027423.16|sorting nexin 5
mm39_v1_chr3_+_104545974_104545991	2.42095	AAGGCAC	ENSMUST00000046212.2|Slc16a1|ENSMUSG00000032902.2|solute carrier family 16 (monocarboxylic acid transporters), member 1
mm39_v1_chr16_-_23807602_23807602	2.41307	AAGGCAC	ENSMUST00000023151.6|Bcl6|ENSMUSG00000022508.6|B cell leukemia/lymphoma 6
mm39_v1_chr17_+_8502594_8502661	2.40237	AAGGCAC	ENSMUST00000155364.8|Mpc1|ENSMUSG00000023861.18|mitochondrial pyruvate carrier 1	ENSMUST00000046754.15|Mpc1|ENSMUSG00000023861.18|mitochondrial pyruvate carrier 1
mm39_v1_chr7_+_113113037_113113053	2.39484	AAGGCAC	ENSMUST00000033018.15|Far1|ENSMUSG00000030759.17|fatty acyl CoA reductase 1
mm39_v1_chr5_+_115479284_115479337	2.38865	AAGGCAC	ENSMUST00000031508.5|Triap1|ENSMUSG00000029535.5|TP53 regulated inhibitor of apoptosis 1
mm39_v1_chr14_-_4808744_4808823	2.38046	AAGGCAC	ENSMUST00000022303.17|Thrb|ENSMUSG00000021779.20|thyroid hormone receptor beta	ENSMUST00000091471.12|Thrb|ENSMUSG00000021779.20|thyroid hormone receptor beta
mm39_v1_chr9_+_44410417_44410569	2.37637	AAGGCAC	ENSMUST00000074989.7|Bcl9l|ENSMUSG00000063382.7|B cell CLL/lymphoma 9-like	ENSMUST00000218913.2|Bcl9l|ENSMUSG00000063382.7|B cell CLL/lymphoma 9-like
mm39_v1_chr15_+_94527117_94527151	2.35834	AAGGCAC	ENSMUST00000080141.6|Tmem117|ENSMUSG00000063296.6|transmembrane protein 117
mm39_v1_chr4_+_11156411_11156453	2.35718	AAGGCAC	ENSMUST00000029865.4|Trp53inp1|ENSMUSG00000028211.12|transformation related protein 53 inducible nuclear protein 1
mm39_v1_chr7_-_80338600_80338690	2.34744	AAGGCAC	ENSMUST00000122255.8|Crtc3|ENSMUSG00000030527.16|CREB regulated transcription coactivator 3
mm39_v1_chr5_+_141227245_141227298	2.34201	AAGGCAC	ENSMUST00000085774.11|Sdk1|ENSMUSG00000039683.17|sidekick cell adhesion molecule 1
mm39_v1_chr4_+_97665843_97665870	2.34083	AAGGCAC	ENSMUST00000075448.13|Nfia|ENSMUSG00000028565.19|nuclear factor I/A	ENSMUST00000092532.13|Nfia|ENSMUSG00000028565.19|nuclear factor I/A
mm39_v1_chr3_-_103698853_103698879	2.33877	AAGGCAC	ENSMUST00000118317.8|Hipk1|ENSMUSG00000008730.18|homeodomain interacting protein kinase 1
mm39_v1_chr2_-_156921135_156921196	2.32838	AAGGCAC	ENSMUST00000069098.7|Soga1|ENSMUSG00000055485.7|suppressor of glucose, autophagy associated 1
mm39_v1_chr13_+_54769592_54769606	2.31786	AAGGCAC	ENSMUST00000126071.9|Faf2|ENSMUSG00000025873.17|Fas associated factor family member 2
mm39_v1_chr3_-_116506294_116506302	2.3168	AAGGCAC	ENSMUST00000029569.9|Slc35a3|ENSMUSG00000027957.14|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
mm39_v1_chr8_+_13338174_13338221	2.31641	AAGGCAC	ENSMUST00000045229.7|Tmco3|ENSMUSG00000038497.8|transmembrane and coiled-coil domains 3
mm39_v1_chr17_-_26314461_26314576	2.31329	AAGGCAC	ENSMUST00000236128.2|Nme4|ENSMUSG00000024177.10|NME/NM23 nucleoside diphosphate kinase 4	ENSMUST00000025007.7|Nme4|ENSMUSG00000024177.10|NME/NM23 nucleoside diphosphate kinase 4
mm39_v1_chr6_-_86374080_86374136	2.29995	AAGGCAC	ENSMUST00000204116.2|Pcyox1|ENSMUSG00000029998.15|prenylcysteine oxidase 1	ENSMUST00000153723.3|Pcyox1|ENSMUSG00000029998.15|prenylcysteine oxidase 1	ENSMUST00000032065.15|Pcyox1|ENSMUSG00000029998.15|prenylcysteine oxidase 1
mm39_v1_chr12_-_85386120_85386169	2.28582	AAGGCAC	ENSMUST00000040992.8|Nek9|ENSMUSG00000034290.10|NIMA (never in mitosis gene a)-related expressed kinase 9
mm39_v1_chr17_+_28128307_28128532	2.28443	AAGGCAC	ENSMUST00000233525.2|Anks1|ENSMUSG00000024219.17|ankyrin repeat and SAM domain containing 1	ENSMUST00000025058.15|Anks1|ENSMUSG00000024219.17|ankyrin repeat and SAM domain containing 1	ENSMUST00000233866.2|Anks1|ENSMUSG00000024219.17|ankyrin repeat and SAM domain containing 1
mm39_v1_chrX_-_13712746_13712826	2.28332	AAGGCAC	ENSMUST00000115436.9|Cask|ENSMUSG00000031012.18|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	ENSMUST00000033321.11|Cask|ENSMUSG00000031012.18|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	ENSMUST00000115438.10|Cask|ENSMUSG00000031012.18|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm39_v1_chr14_+_54491637_54491704	2.28281	AAGGCAC	ENSMUST00000180359.8|Abhd4|ENSMUSG00000040997.15|abhydrolase domain containing 4	ENSMUST00000199338.2|Abhd4|ENSMUSG00000040997.15|abhydrolase domain containing 4
mm39_v1_chr9_-_82857528_82857569	2.27772	AAGGCAC	ENSMUST00000034787.12|Phip|ENSMUSG00000032253.14|pleckstrin homology domain interacting protein
mm39_v1_chr6_+_108805594_108805682	2.26875	AAGGCAC	ENSMUST00000089162.5|Edem1|ENSMUSG00000030104.10|ER degradation enhancer, mannosidase alpha-like 1
mm39_v1_chr15_-_97806142_97806197	2.26689	AAGGCAC	ENSMUST00000023119.15|Vdr|ENSMUSG00000022479.16|vitamin D (1,25-dihydroxyvitamin D3) receptor
mm39_v1_chr8_-_85526653_85526912	2.26293	AAGGCAC	ENSMUST00000126806.2|Nfix|ENSMUSG00000001911.17|nuclear factor I/X	ENSMUST00000076715.13|Nfix|ENSMUSG00000001911.17|nuclear factor I/X
mm39_v1_chr12_-_84265609_84265663	2.25201	AAGGCAC	ENSMUST00000046266.13|Mideas|ENSMUSG00000042507.16|mitotic deacetylase associated SANT domain protein	ENSMUST00000220974.2|Mideas|ENSMUSG00000042507.16|mitotic deacetylase associated SANT domain protein
mm39_v1_chr13_+_56850795_56850925	2.24943	AAGGCAC	ENSMUST00000069557.14|Smad5|ENSMUSG00000021540.17|SMAD family member 5	ENSMUST00000109876.8|Smad5|ENSMUSG00000021540.17|SMAD family member 5
mm39_v1_chr1_-_106724417_106724458	2.24456	AAGGCAC	ENSMUST00000094646.6|Vps4b|ENSMUSG00000009907.18|vacuolar protein sorting 4B
mm39_v1_chr15_+_25843225_25843275	2.24327	AAGGCAC	ENSMUST00000022881.15|Retreg1|ENSMUSG00000022270.17|reticulophagy regulator 1
mm39_v1_chr4_-_141412910_141412910	2.23071	AAGGCAC	ENSMUST00000105782.2|Rsc1a1|ENSMUSG00000040715.13|regulatory solute carrier protein, family 1, member 1
mm39_v1_chr10_-_66932685_66932738	2.22914	AAGGCAC	ENSMUST00000020023.9|Reep3|ENSMUSG00000019873.9|receptor accessory protein 3
mm39_v1_chr3_-_89177796_89177877	2.22797	AAGGCAC	ENSMUST00000107460.8|Slc50a1|ENSMUSG00000027953.14|solute carrier family 50 (sugar transporter), member 1	ENSMUST00000029565.11|Slc50a1|ENSMUSG00000027953.14|solute carrier family 50 (sugar transporter), member 1	ENSMUST00000130230.2|Slc50a1|ENSMUSG00000027953.14|solute carrier family 50 (sugar transporter), member 1
mm39_v1_chr11_+_45946800_45946895	2.22687	AAGGCAC	ENSMUST00000011400.8|Adam19|ENSMUSG00000011256.17|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm39_v1_chr19_+_18648088_18648213	2.22412	AAGGCAC	ENSMUST00000025632.11|Carnmt1|ENSMUSG00000024726.11|carnosine N-methyltransferase 1
mm39_v1_chr12_-_102844537_102844709	2.22262	AAGGCAC	ENSMUST00000045652.8|Btbd7|ENSMUSG00000041702.8|BTB (POZ) domain containing 7	ENSMUST00000223554.2|Btbd7|ENSMUSG00000041702.8|BTB (POZ) domain containing 7
mm39_v1_chr4_-_87951565_87951610	2.22203	AAGGCAC	ENSMUST00000078090.12|Mllt3|ENSMUSG00000028496.18|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
mm39_v1_chr12_-_75782502_75782511	2.22169	AAGGCAC	ENSMUST00000021450.6|Sgpp1|ENSMUSG00000021054.7|sphingosine-1-phosphate phosphatase 1
mm39_v1_chr6_-_113717689_113717704	2.18877	AAGGCAC	ENSMUST00000032440.6|Sec13|ENSMUSG00000030298.11|SEC13 homolog, nuclear pore and COPII coat complex component
mm39_v1_chrX_+_23559282_23559357	2.18488	AAGGCAC	ENSMUST00000035766.13|Wdr44|ENSMUSG00000036769.15|WD repeat domain 44	ENSMUST00000101670.3|Wdr44|ENSMUSG00000036769.15|WD repeat domain 44
mm39_v1_chr11_-_121095462_121095543	2.18162	AAGGCAC	ENSMUST00000026169.7|Ogfod3|ENSMUSG00000025169.7|2-oxoglutarate and iron-dependent oxygenase domain containing 3
mm39_v1_chr10_+_127575407_127575457	2.17641	AAGGCAC	ENSMUST00000054287.9|Zbtb39|ENSMUSG00000044617.9|zinc finger and BTB domain containing 39
mm39_v1_chrX_+_74425990_74426005	2.1679	AAGGCAC	ENSMUST00000033541.5|Fundc2|ENSMUSG00000031198.5|FUN14 domain containing 2
mm39_v1_chr4_-_126362372_126362446	2.15501	AAGGCAC	ENSMUST00000097888.10|Ago1|ENSMUSG00000041530.18|argonaute RISC catalytic subunit 1	ENSMUST00000239399.2|Ago1|ENSMUSG00000041530.18|argonaute RISC catalytic subunit 1
mm39_v1_chr13_+_42205491_42205548	2.15187	AAGGCAC	ENSMUST00000060148.6|Hivep1|ENSMUSG00000021366.9|human immunodeficiency virus type I enhancer binding protein 1
mm39_v1_chr14_+_75373766_75373784	2.15177	AAGGCAC	ENSMUST00000145303.8|Lcp1|ENSMUSG00000021998.17|lymphocyte cytosolic protein 1
mm39_v1_chr5_-_136596299_136596390	2.15064	AAGGCAC	ENSMUST00000004097.16|Cux1|ENSMUSG00000029705.18|cut-like homeobox 1
mm39_v1_chr19_-_29025233_29025377	2.14989	AAGGCAC	ENSMUST00000025696.5|Ak3|ENSMUSG00000024782.8|adenylate kinase 3
mm39_v1_chr9_+_122180673_122180803	2.14934	AAGGCAC	ENSMUST00000156520.8|Abhd5|ENSMUSG00000032540.17|abhydrolase domain containing 5	ENSMUST00000111497.5|Abhd5|ENSMUSG00000032540.17|abhydrolase domain containing 5
mm39_v1_chr3_+_41510160_41510195	2.14809	AAGGCAC	ENSMUST00000026865.15|Jade1|ENSMUSG00000025764.15|jade family PHD finger 1	ENSMUST00000194181.6|Jade1|ENSMUSG00000025764.15|jade family PHD finger 1	ENSMUST00000195846.6|Jade1|ENSMUSG00000025764.15|jade family PHD finger 1
mm39_v1_chr9_+_32607301_32607417	2.14195	AAGGCAC	ENSMUST00000034534.13|Ets1|ENSMUSG00000032035.17|E26 avian leukemia oncogene 1, 5' domain	ENSMUST00000050797.14|Ets1|ENSMUSG00000032035.17|E26 avian leukemia oncogene 1, 5' domain	ENSMUST00000184887.2|Ets1|ENSMUSG00000032035.17|E26 avian leukemia oncogene 1, 5' domain
mm39_v1_chr10_-_59057570_59057669	2.13973	AAGGCAC	ENSMUST00000220156.2|Septin10|ENSMUSG00000019917.11|septin 10	ENSMUST00000165971.3|Septin10|ENSMUSG00000019917.11|septin 10
mm39_v1_chr14_+_25842565_25842594	2.13932	AAGGCAC	ENSMUST00000022416.15|Anxa11|ENSMUSG00000021866.16|annexin A11
mm39_v1_chr12_-_69728572_69728632	2.13748	AAGGCAC	ENSMUST00000183277.8|Sos2|ENSMUSG00000034801.14|SOS Ras/Rho guanine nucleotide exchange factor 2	ENSMUST00000035773.14|Sos2|ENSMUSG00000034801.14|SOS Ras/Rho guanine nucleotide exchange factor 2
mm39_v1_chr1_+_125488747_125488832	2.13191	AAGGCAC	ENSMUST00000027580.11|Slc35f5|ENSMUSG00000026342.11|solute carrier family 35, member F5
mm39_v1_chr16_+_91855158_91855216	2.12158	AAGGCAC	ENSMUST00000047429.9|Mrps6|ENSMUSG00000039680.11|mitochondrial ribosomal protein S6	ENSMUST00000232677.2|Gm49711|ENSMUSG00000116930.2|predicted gene, 49711	ENSMUST00000113975.3|Slc5a3|ENSMUSG00000089774.3|solute carrier family 5 (inositol transporters), member 3
mm39_v1_chr4_-_120955387_120955447	2.11953	AAGGCAC	ENSMUST00000058754.9|Zmpste24|ENSMUSG00000043207.11|zinc metallopeptidase, STE24
mm39_v1_chr8_-_106553822_106553982	2.11514	AAGGCAC	ENSMUST00000239468.2|Ranbp10|ENSMUSG00000037415.8|RAN binding protein 10	ENSMUST00000041400.6|Ranbp10|ENSMUSG00000037415.8|RAN binding protein 10
mm39_v1_chr5_+_143389573_143389642	2.11275	AAGGCAC	ENSMUST00000110731.4|Kdelr2|ENSMUSG00000079111.4|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2
mm39_v1_chr14_+_26300693_26300767	2.11008	AAGGCAC	ENSMUST00000203874.3|Dennd6a|ENSMUSG00000040818.11|DENN/MADD domain containing 6A	ENSMUST00000037585.9|Dennd6a|ENSMUSG00000040818.11|DENN/MADD domain containing 6A
mm39_v1_chr2_+_128659997_128660061	2.10605	AAGGCAC	ENSMUST00000110325.8|Tmem87b|ENSMUSG00000014353.16|transmembrane protein 87B
mm39_v1_chr2_+_181138958_181139009	2.09791	AAGGCAC	ENSMUST00000149163.8|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2	ENSMUST00000000844.15|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2	ENSMUST00000184849.8|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2	ENSMUST00000108800.8|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2	ENSMUST00000069712.9|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2
mm39_v1_chr7_+_107194446_107194492	2.07193	AAGGCAC	ENSMUST00000040056.15|Ppfibp2|ENSMUSG00000036528.17|PTPRF interacting protein, binding protein 2 (liprin beta 2)	ENSMUST00000208956.2|Ppfibp2|ENSMUSG00000036528.17|PTPRF interacting protein, binding protein 2 (liprin beta 2)
mm39_v1_chr6_-_13607963_13608099	2.06631	AAGGCAC	ENSMUST00000031554.9|Tmem168|ENSMUSG00000029569.10|transmembrane protein 168	ENSMUST00000149123.3|Tmem168|ENSMUSG00000029569.10|transmembrane protein 168
mm39_v1_chr9_-_94420128_94420142	2.06367	AAGGCAC	ENSMUST00000113028.2|Dipk2a|ENSMUSG00000045414.8|divergent protein kinase domain 2A
mm39_v1_chr15_-_81742686_81742741	2.06073	AAGGCAC	ENSMUST00000050467.9|Tob2|ENSMUSG00000048546.9|transducer of ERBB2, 2	ENSMUST00000231000.2|Tob2|ENSMUSG00000048546.9|transducer of ERBB2, 2
mm39_v1_chr12_-_112893382_112893398	2.06009	AAGGCAC	ENSMUST00000075827.5|Jag2|ENSMUSG00000002799.7|jagged 2
mm39_v1_chr18_+_64473091_64473114	2.0574	AAGGCAC	ENSMUST00000175965.10|Onecut2|ENSMUSG00000045991.20|one cut domain, family member 2
mm39_v1_chr10_+_77417554_77417575	2.05455	AAGGCAC	ENSMUST00000009435.12|Pttg1ip|ENSMUSG00000009291.14|pituitary tumor-transforming 1 interacting protein
mm39_v1_chr14_-_24295988_24295988	2.04397	AAGGCAC	ENSMUST00000073687.13|Dlg5|ENSMUSG00000021782.15|discs large MAGUK scaffold protein 5	ENSMUST00000090398.11|Dlg5|ENSMUSG00000021782.15|discs large MAGUK scaffold protein 5
mm39_v1_chr10_+_128769642_128769697	2.04125	AAGGCAC	ENSMUST00000099112.4|Itga7|ENSMUSG00000025348.10|integrin alpha 7	ENSMUST00000218290.2|Itga7|ENSMUSG00000025348.10|integrin alpha 7
mm39_v1_chr6_-_47571901_47571981	2.01993	AAGGCAC	ENSMUST00000081721.13|Ezh2|ENSMUSG00000029687.17|enhancer of zeste 2 polycomb repressive complex 2 subunit	ENSMUST00000114618.8|Ezh2|ENSMUSG00000029687.17|enhancer of zeste 2 polycomb repressive complex 2 subunit	ENSMUST00000114616.8|Ezh2|ENSMUSG00000029687.17|enhancer of zeste 2 polycomb repressive complex 2 subunit
mm39_v1_chr6_+_65019574_65019651	2.01526	AAGGCAC	ENSMUST00000031984.9|Smarcad1|ENSMUSG00000029920.10|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	ENSMUST00000205118.3|Smarcad1|ENSMUSG00000029920.10|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm39_v1_chr18_+_24338358_24338406	2.00683	AAGGCAC	ENSMUST00000000430.14|Galnt1|ENSMUSG00000000420.16|polypeptide N-acetylgalactosaminyltransferase 1
mm39_v1_chr11_+_35660288_35660311	1.99833	AAGGCAC	ENSMUST00000018990.8|Pank3|ENSMUSG00000018846.9|pantothenate kinase 3
mm39_v1_chrX_+_6489313_6489349	1.99465	AAGGCAC	ENSMUST00000089520.3|Shroom4|ENSMUSG00000068270.16|shroom family member 4
mm39_v1_chr1_+_131935342_131935373	1.99068	AAGGCAC	ENSMUST00000086556.12|Elk4|ENSMUSG00000026436.16|ELK4, member of ETS oncogene family
mm39_v1_chr11_-_90578397_90578433	1.9752	AAGGCAC	ENSMUST00000107869.9|Tom1l1|ENSMUSG00000020541.13|target of myb1-like 1 (chicken)	ENSMUST00000154599.2|Tom1l1|ENSMUSG00000020541.13|target of myb1-like 1 (chicken)	ENSMUST00000107868.8|Tom1l1|ENSMUSG00000020541.13|target of myb1-like 1 (chicken)	ENSMUST00000020849.9|Tom1l1|ENSMUSG00000020541.13|target of myb1-like 1 (chicken)
mm39_v1_chr18_+_32296126_32296249	1.96615	AAGGCAC	ENSMUST00000096575.5|Map3k2|ENSMUSG00000024383.10|mitogen-activated protein kinase kinase kinase 2
mm39_v1_chr2_+_76236870_76236936	1.96348	AAGGCAC	ENSMUST00000077972.11|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6	ENSMUST00000111929.8|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6	ENSMUST00000111930.9|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6
mm39_v1_chr16_+_35758836_35758860	1.96036	AAGGCAC	ENSMUST00000114878.8|Parp9|ENSMUSG00000022906.16|poly (ADP-ribose) polymerase family, member 9
mm39_v1_chr5_+_16139760_16139827	1.95532	AAGGCAC	ENSMUST00000101581.10|Cacna2d1|ENSMUSG00000040118.16|calcium channel, voltage-dependent, alpha2/delta subunit 1	ENSMUST00000039370.14|Cacna2d1|ENSMUSG00000040118.16|calcium channel, voltage-dependent, alpha2/delta subunit 1	ENSMUST00000199704.5|Cacna2d1|ENSMUSG00000040118.16|calcium channel, voltage-dependent, alpha2/delta subunit 1	ENSMUST00000180204.8|Cacna2d1|ENSMUSG00000040118.16|calcium channel, voltage-dependent, alpha2/delta subunit 1	ENSMUST00000078272.13|Cacna2d1|ENSMUSG00000040118.16|calcium channel, voltage-dependent, alpha2/delta subunit 1	ENSMUST00000115281.7|Cacna2d1|ENSMUSG00000040118.16|calcium channel, voltage-dependent, alpha2/delta subunit 1
mm39_v1_chr2_-_164285097_164285114	1.95164	AAGGCAC	ENSMUST00000017153.4|Sdc4|ENSMUSG00000017009.4|syndecan 4
mm39_v1_chr11_+_78079243_78079311	1.94955	AAGGCAC	ENSMUST00000002128.14|Rab34|ENSMUSG00000002059.19|RAB34, member RAS oncogene family	ENSMUST00000150941.8|Rab34|ENSMUSG00000002059.19|RAB34, member RAS oncogene family
mm39_v1_chr14_+_32578713_32578765	1.93712	AAGGCAC	ENSMUST00000053175.13|Vstm4|ENSMUSG00000050666.15|V-set and transmembrane domain containing 4
mm39_v1_chr16_+_27207599_27207619	1.93149	AAGGCAC	ENSMUST00000239351.2|Ccdc50|ENSMUSG00000038127.16|coiled-coil domain containing 50	ENSMUST00000100026.10|Ccdc50|ENSMUSG00000038127.16|coiled-coil domain containing 50
mm39_v1_chr19_+_7471398_7471460	1.92992	AAGGCAC	ENSMUST00000170373.9|Atl3|ENSMUSG00000024759.15|atlastin GTPase 3	ENSMUST00000236308.2|Atl3|ENSMUSG00000024759.15|atlastin GTPase 3	ENSMUST00000235557.2|Atl3|ENSMUSG00000024759.15|atlastin GTPase 3
mm39_v1_chr18_-_39623698_39623771	1.92814	AAGGCAC	ENSMUST00000115567.8|Nr3c1|ENSMUSG00000024431.16|nuclear receptor subfamily 3, group C, member 1
mm39_v1_chr3_-_122413361_122413372	1.92599	AAGGCAC	ENSMUST00000239148.2|Fnbp1l|ENSMUSG00000039735.17|formin binding protein 1-like	ENSMUST00000162409.8|Fnbp1l|ENSMUSG00000039735.17|formin binding protein 1-like	ENSMUST00000162947.3|Fnbp1l|ENSMUSG00000039735.17|formin binding protein 1-like
mm39_v1_chr3_-_46402355_46402415	1.92564	AAGGCAC	ENSMUST00000195537.2|Pabpc4l|ENSMUSG00000090919.7|poly(A) binding protein, cytoplasmic 4-like	ENSMUST00000166505.7|Pabpc4l|ENSMUSG00000090919.7|poly(A) binding protein, cytoplasmic 4-like	ENSMUST00000195436.2|Pabpc4l|ENSMUSG00000090919.7|poly(A) binding protein, cytoplasmic 4-like
mm39_v1_chr18_+_36414122_36414204	1.92179	AAGGCAC	ENSMUST00000051301.6|Pura|ENSMUSG00000043991.6|purine rich element binding protein A
mm39_v1_chr2_+_75662511_75662538	1.89373	AAGGCAC	ENSMUST00000047232.14|Agps|ENSMUSG00000042410.17|alkylglycerone phosphate synthase	ENSMUST00000111952.9|Agps|ENSMUSG00000042410.17|alkylglycerone phosphate synthase
mm39_v1_chr11_+_53660834_53660886	1.8922	AAGGCAC	ENSMUST00000108920.10|Irf1|ENSMUSG00000018899.18|interferon regulatory factor 1	ENSMUST00000140866.9|Irf1|ENSMUSG00000018899.18|interferon regulatory factor 1	ENSMUST00000108922.9|Irf1|ENSMUSG00000018899.18|interferon regulatory factor 1
mm39_v1_chr11_+_115705550_115705604	1.8885	AAGGCAC	ENSMUST00000021134.10|Tsen54|ENSMUSG00000020781.15|tRNA splicing endonuclease subunit 54	ENSMUST00000106481.9|Tsen54|ENSMUSG00000020781.15|tRNA splicing endonuclease subunit 54
mm39_v1_chr8_-_122379631_122379652	1.88602	AAGGCAC	ENSMUST00000046386.5|Zcchc14|ENSMUSG00000061410.7|zinc finger, CCHC domain containing 14
mm39_v1_chr2_-_93292734_93292757	1.8825	AAGGCAC	ENSMUST00000099696.8|Cd82|ENSMUSG00000027215.14|CD82 antigen
mm39_v1_chr17_-_45903188_45903337	1.88099	AAGGCAC	ENSMUST00000164769.8|Slc29a1|ENSMUSG00000023942.16|solute carrier family 29 (nucleoside transporters), member 1
mm39_v1_chr10_+_95776543_95776647	1.86973	AAGGCAC	ENSMUST00000053484.8|Eea1|ENSMUSG00000036499.10|early endosome antigen 1
mm39_v1_chr3_-_95125002_95125038	1.86972	AAGGCAC	ENSMUST00000107209.8|Gabpb2|ENSMUSG00000038766.17|GA repeat binding protein, beta 2
mm39_v1_chr4_-_4793274_4793382	1.8619	AAGGCAC	ENSMUST00000084949.3|Bpnt2|ENSMUSG00000066324.3|3'(2'), 5'-bisphosphate nucleotidase 2
mm39_v1_chr12_+_32428691_32428709	1.86132	AAGGCAC	ENSMUST00000172332.4|Ccdc71l|ENSMUSG00000090946.4|coiled-coil domain containing 71 like
mm39_v1_chr14_-_106134253_106134253	1.85821	AAGGCAC	ENSMUST00000022709.6|Spry2|ENSMUSG00000022114.6|sprouty RTK signaling antagonist 2
mm39_v1_chr9_-_21710029_21710051	1.84917	AAGGCAC	ENSMUST00000034717.7|Kank2|ENSMUSG00000032194.10|KN motif and ankyrin repeat domains 2
mm39_v1_chr4_-_11322106_11322147	1.84876	AAGGCAC	ENSMUST00000084892.12|Dpy19l4|ENSMUSG00000045205.17|dpy-19-like 4 (C. elegans)	ENSMUST00000128024.8|Dpy19l4|ENSMUSG00000045205.17|dpy-19-like 4 (C. elegans)
mm39_v1_chr7_-_136916123_136916174	1.83917	AAGGCAC	ENSMUST00000106118.10|Ebf3|ENSMUSG00000010476.15|early B cell factor 3	ENSMUST00000168203.2|Ebf3|ENSMUSG00000010476.15|early B cell factor 3	ENSMUST00000169486.9|Ebf3|ENSMUSG00000010476.15|early B cell factor 3	ENSMUST00000033378.13|Ebf3|ENSMUSG00000010476.15|early B cell factor 3
mm39_v1_chr4_+_99786611_99786729	1.83461	AAGGCAC	ENSMUST00000058351.16|Pgm1|ENSMUSG00000025791.19|phosphoglucomutase 1
mm39_v1_chr2_+_3119442_3119513	1.82956	AAGGCAC	ENSMUST00000091505.11|Fam171a1|ENSMUSG00000050530.15|family with sequence similarity 171, member A1
mm39_v1_chr1_-_95595280_95595323	1.82922	AAGGCAC	ENSMUST00000043336.11|St8sia4|ENSMUSG00000040710.11|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm39_v1_chr19_+_56536685_56536716	1.81825	AAGGCAC	ENSMUST00000071423.7|Nhlrc2|ENSMUSG00000025078.10|NHL repeat containing 2
mm39_v1_chr6_-_94677118_94677157	1.81647	AAGGCAC	ENSMUST00000101126.3|Lrig1|ENSMUSG00000030029.15|leucine-rich repeats and immunoglobulin-like domains 1	ENSMUST00000032105.11|Lrig1|ENSMUSG00000030029.15|leucine-rich repeats and immunoglobulin-like domains 1
mm39_v1_chr17_+_29709723_29709742	1.80584	AAGGCAC	ENSMUST00000024811.9|Pim1|ENSMUSG00000024014.9|proviral integration site 1
mm39_v1_chr17_+_48047955_48048033	1.80095	AAGGCAC	ENSMUST00000086932.10|Tfeb|ENSMUSG00000023990.19|transcription factor EB
mm39_v1_chr11_-_69906171_69906261	1.7999	AAGGCAC	ENSMUST00000018718.8|Acadvl|ENSMUSG00000018574.15|acyl-Coenzyme A dehydrogenase, very long chain	ENSMUST00000102574.10|Acadvl|ENSMUSG00000018574.15|acyl-Coenzyme A dehydrogenase, very long chain
mm39_v1_chr13_-_35178086_35178264	1.79839	AAGGCAC	ENSMUST00000171258.8|Eci2|ENSMUSG00000021417.16|enoyl-Coenzyme A delta isomerase 2	ENSMUST00000170989.8|Eci2|ENSMUSG00000021417.16|enoyl-Coenzyme A delta isomerase 2	ENSMUST00000110251.9|Eci2|ENSMUSG00000021417.16|enoyl-Coenzyme A delta isomerase 2	ENSMUST00000167036.8|Eci2|ENSMUSG00000021417.16|enoyl-Coenzyme A delta isomerase 2	ENSMUST00000171229.8|Eci2|ENSMUSG00000021417.16|enoyl-Coenzyme A delta isomerase 2	ENSMUST00000178421.8|Eci2|ENSMUSG00000021417.16|enoyl-Coenzyme A delta isomerase 2	ENSMUST00000021854.14|Eci2|ENSMUSG00000021417.16|enoyl-Coenzyme A delta isomerase 2
mm39_v1_chr9_+_69305180_69305210	1.79736	AAGGCAC	ENSMUST00000034761.15|Ice2|ENSMUSG00000032235.16|interactor of little elongation complex ELL subunit 2	ENSMUST00000125938.2|Ice2|ENSMUSG00000032235.16|interactor of little elongation complex ELL subunit 2
mm39_v1_chr5_-_124170305_124170353	1.79396	AAGGCAC	ENSMUST00000040967.9|Vps37b|ENSMUSG00000066278.7|vacuolar protein sorting 37B
mm39_v1_chr9_-_21421458_21421548	1.79155	AAGGCAC	ENSMUST00000213167.2|Tmed1|ENSMUSG00000032180.12|transmembrane p24 trafficking protein 1	ENSMUST00000034698.9|Tmed1|ENSMUSG00000032180.12|transmembrane p24 trafficking protein 1
mm39_v1_chr14_-_21102487_21102592	1.78701	AAGGCAC	ENSMUST00000154460.8|Ap3m1|ENSMUSG00000021824.14|adaptor-related protein complex 3, mu 1 subunit	ENSMUST00000130291.8|Ap3m1|ENSMUSG00000021824.14|adaptor-related protein complex 3, mu 1 subunit
mm39_v1_chr6_-_72416531_72416548	1.77823	AAGGCAC	ENSMUST00000205335.2|Mat2a|ENSMUSG00000053907.11|methionine adenosyltransferase II, alpha	ENSMUST00000206692.2|Mat2a|ENSMUSG00000053907.11|methionine adenosyltransferase II, alpha	ENSMUST00000059472.10|Mat2a|ENSMUSG00000053907.11|methionine adenosyltransferase II, alpha
mm39_v1_chr14_+_48683797_48683886	1.77491	AAGGCAC	ENSMUST00000111735.10|Tmem260|ENSMUSG00000036339.19|transmembrane protein 260
mm39_v1_chr17_+_26633794_26633939	1.77084	AAGGCAC	ENSMUST00000182897.8|Neurl1b|ENSMUSG00000034413.15|neuralized E3 ubiquitin protein ligase 1B	ENSMUST00000183077.8|Neurl1b|ENSMUSG00000034413.15|neuralized E3 ubiquitin protein ligase 1B	ENSMUST00000053020.8|Neurl1b|ENSMUSG00000034413.15|neuralized E3 ubiquitin protein ligase 1B
mm39_v1_chr3_-_142587678_142587787	1.7693	AAGGCAC	ENSMUST00000043812.15|Pkn2|ENSMUSG00000004591.17|protein kinase N2
mm39_v1_chr10_-_59452489_59452514	1.7674	AAGGCAC	ENSMUST00000020312.13|Mcu|ENSMUSG00000009647.14|mitochondrial calcium uniporter
mm39_v1_chr18_+_36812246_36812306	1.76425	AAGGCAC	ENSMUST00000186538.7|Slc35a4|ENSMUSG00000033272.13|solute carrier family 35, member A4
mm39_v1_chr18_-_84104507_84104529	1.76103	AAGGCAC	ENSMUST00000060303.10|Tshz1|ENSMUSG00000046982.12|teashirt zinc finger family member 1
mm39_v1_chr1_-_143652711_143652806	1.75594	AAGGCAC	ENSMUST00000159879.2|Ro60|ENSMUSG00000018199.10|Ro60, Y RNA binding protein
mm39_v1_chr5_-_115296222_115296241	1.75129	AAGGCAC	ENSMUST00000112121.6|Mlec|ENSMUSG00000048578.12|malectin
mm39_v1_chr11_+_95227836_95227852	1.74957	AAGGCAC	ENSMUST00000037502.7|Fam117a|ENSMUSG00000038893.13|family with sequence similarity 117, member A
mm39_v1_chr18_+_69478790_69478882	1.73454	AAGGCAC	ENSMUST00000202116.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000114982.8|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000078486.13|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000202772.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000201288.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4
mm39_v1_chr2_-_17735847_17735898	1.73014	AAGGCAC	ENSMUST00000028080.12|Nebl|ENSMUSG00000053702.17|nebulette
mm39_v1_chr19_+_11943265_11943305	1.71996	AAGGCAC	ENSMUST00000025590.11|Osbp|ENSMUSG00000024687.12|oxysterol binding protein
mm39_v1_chr1_+_16175998_16176095	1.71808	AAGGCAC	ENSMUST00000027053.8|Rdh10|ENSMUSG00000025921.8|retinol dehydrogenase 10 (all-trans)
mm39_v1_chr10_-_118705029_118705091	1.71396	AAGGCAC	ENSMUST00000004281.10|Dyrk2|ENSMUSG00000028630.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
mm39_v1_chr13_-_64422693_64422761	1.71388	AAGGCAC	ENSMUST00000109770.2|Cdc14b|ENSMUSG00000033102.16|CDC14 cell division cycle 14B
mm39_v1_chr4_+_148025316_148025390	1.70456	AAGGCAC	ENSMUST00000103232.2|2510039O18Rik|ENSMUSG00000044496.7|RIKEN cDNA 2510039O18 gene
mm39_v1_chr9_-_36678868_36678975	1.70201	AAGGCAC	ENSMUST00000217599.2|Stt3a|ENSMUSG00000032116.19|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)	ENSMUST00000120381.9|Stt3a|ENSMUSG00000032116.19|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
mm39_v1_chr5_-_114911548_114911577	1.70121	AAGGCAC	ENSMUST00000178440.8|Git2|ENSMUSG00000041890.18|GIT ArfGAP 2	ENSMUST00000043283.14|Git2|ENSMUSG00000041890.18|GIT ArfGAP 2	ENSMUST00000112185.9|Git2|ENSMUSG00000041890.18|GIT ArfGAP 2	ENSMUST00000155908.8|Git2|ENSMUSG00000041890.18|GIT ArfGAP 2
mm39_v1_chr4_-_3938352_3938401	1.69401	AAGGCAC	ENSMUST00000003369.10|Plag1|ENSMUSG00000003282.10|pleiomorphic adenoma gene 1
mm39_v1_chr6_-_6217021_6217125	1.68644	AAGGCAC	ENSMUST00000015256.15|Slc25a13|ENSMUSG00000015112.16|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm39_v1_chr6_-_70769135_70769216	1.67729	AAGGCAC	ENSMUST00000066134.6|Rpia|ENSMUSG00000053604.6|ribose 5-phosphate isomerase A
mm39_v1_chr17_-_24292453_24292464	1.67636	AAGGCAC	ENSMUST00000017090.6|Kctd5|ENSMUSG00000016946.7|potassium channel tetramerisation domain containing 5
mm39_v1_chr2_+_4405769_4405786	1.65809	AAGGCAC	ENSMUST00000075767.14|Frmd4a|ENSMUSG00000026657.18|FERM domain containing 4A
mm39_v1_chr2_+_79465696_79465729	1.65594	AAGGCAC	ENSMUST00000111785.9|Itprid2|ENSMUSG00000027007.17|ITPR interacting domain containing 2
mm39_v1_chr5_+_122422428_122422461	1.64961	AAGGCAC	ENSMUST00000053426.15|Pptc7|ENSMUSG00000038582.16|PTC7 protein phosphatase homolog
mm39_v1_chr15_-_53765869_53765926	1.64575	AAGGCAC	ENSMUST00000078673.14|Samd12|ENSMUSG00000058656.14|sterile alpha motif domain containing 12
mm39_v1_chrX_+_158410229_158410294	1.64251	AAGGCAC	ENSMUST00000112456.9|Sh3kbp1|ENSMUSG00000040990.18|SH3-domain kinase binding protein 1
mm39_v1_chr10_-_83369994_83370005	1.6425	AAGGCAC	ENSMUST00000020497.14|Aldh1l2|ENSMUSG00000020256.15|aldehyde dehydrogenase 1 family, member L2
mm39_v1_chr2_-_126775136_126775161	1.64124	AAGGCAC	ENSMUST00000028844.11|Sppl2a|ENSMUSG00000027366.13|signal peptide peptidase like 2A
mm39_v1_chr12_-_50695881_50696064	1.63681	AAGGCAC	ENSMUST00000002765.9|Prkd1|ENSMUSG00000002688.9|protein kinase D1
mm39_v1_chr2_-_63928339_63928367	1.63518	AAGGCAC	ENSMUST00000131615.9|Fign|ENSMUSG00000075324.14|fidgetin
mm39_v1_chr5_-_115272964_115273034	1.63493	AAGGCAC	ENSMUST00000060798.6|Unc119b|ENSMUSG00000046562.6|unc-119 lipid binding chaperone B
mm39_v1_chr3_+_14643669_14643756	1.63375	AAGGCAC	ENSMUST00000029069.13|E2f5|ENSMUSG00000027552.15|E2F transcription factor 5	ENSMUST00000165922.3|E2f5|ENSMUSG00000027552.15|E2F transcription factor 5
mm39_v1_chr19_-_5610628_5610674	1.63292	AAGGCAC	ENSMUST00000025861.3|Ovol1|ENSMUSG00000024922.3|ovo like zinc finger 1
mm39_v1_chr5_-_113311185_113311217	1.61946	AAGGCAC	ENSMUST00000050125.9|2900026A02Rik|ENSMUSG00000051339.11|RIKEN cDNA 2900026A02 gene
mm39_v1_chr17_-_26463177_26463216	1.61802	AAGGCAC	ENSMUST00000234687.2|Fam234a|ENSMUSG00000024187.16|family with sequence similarity 234, member A	ENSMUST00000234554.2|Fam234a|ENSMUSG00000024187.16|family with sequence similarity 234, member A	ENSMUST00000114988.8|Fam234a|ENSMUSG00000024187.16|family with sequence similarity 234, member A	ENSMUST00000141240.3|Fam234a|ENSMUSG00000024187.16|family with sequence similarity 234, member A	ENSMUST00000234175.2|Fam234a|ENSMUSG00000024187.16|family with sequence similarity 234, member A
mm39_v1_chrX_+_71006577_71006619	1.618	AAGGCAC	ENSMUST00000048790.7|Prrg3|ENSMUSG00000033361.14|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)
mm39_v1_chr8_+_88845375_88845405	1.61312	AAGGCAC	ENSMUST00000095214.10|Cnep1r1|ENSMUSG00000036810.17|CTD nuclear envelope phosphatase 1 regulatory subunit 1
mm39_v1_chr9_+_21249118_21249155	1.60942	AAGGCAC	ENSMUST00000034697.8|Slc44a2|ENSMUSG00000057193.9|solute carrier family 44, member 2
mm39_v1_chr10_-_7162196_7162248	1.60374	AAGGCAC	ENSMUST00000015346.12|Cnksr3|ENSMUSG00000015202.14|Cnksr family member 3
mm39_v1_chr12_-_3359924_3359975	1.59938	AAGGCAC	ENSMUST00000021001.10|Rab10|ENSMUSG00000020671.10|RAB10, member RAS oncogene family
mm39_v1_chrX_+_41238193_41238289	1.58588	AAGGCAC	ENSMUST00000115073.9|Stag2|ENSMUSG00000025862.15|stromal antigen 2	ENSMUST00000115072.8|Stag2|ENSMUSG00000025862.15|stromal antigen 2
mm39_v1_chr16_+_92295009_92295063	1.58276	AAGGCAC	ENSMUST00000023670.4|Clic6|ENSMUSG00000022949.10|chloride intracellular channel 6
mm39_v1_chr4_-_34882917_34882964	1.56786	AAGGCAC	ENSMUST00000098163.9|Zfp292|ENSMUSG00000039967.15|zinc finger protein 292	ENSMUST00000047950.6|Zfp292|ENSMUSG00000039967.15|zinc finger protein 292
mm39_v1_chr16_+_78727829_78727847	1.56377	AAGGCAC	ENSMUST00000114216.2|Chodl|ENSMUSG00000022860.16|chondrolectin	ENSMUST00000069148.13|Chodl|ENSMUSG00000022860.16|chondrolectin	ENSMUST00000023568.14|Chodl|ENSMUSG00000022860.16|chondrolectin
mm39_v1_chr17_+_26357648_26357924	1.56173	AAGGCAC	ENSMUST00000074370.10|Axin1|ENSMUSG00000024182.17|axin 1	ENSMUST00000118904.9|Axin1|ENSMUSG00000024182.17|axin 1	ENSMUST00000163421.8|Axin1|ENSMUSG00000024182.17|axin 1
mm39_v1_chrX_+_135950334_135950415	1.5606	AAGGCAC	ENSMUST00000047852.8|Fam199x|ENSMUSG00000042595.8|family with sequence similarity 199, X-linked
mm39_v1_chr4_-_114844417_114844453	1.55401	AAGGCAC	ENSMUST00000030491.9|Cmpk1|ENSMUSG00000028719.9|cytidine monophosphate (UMP-CMP) kinase 1
mm39_v1_chr10_-_31485180_31485180	1.53602	AAGGCAC	ENSMUST00000081989.8|Rnf217|ENSMUSG00000063760.10|ring finger protein 217
mm39_v1_chr6_+_116314975_116315044	1.52572	AAGGCAC	ENSMUST00000079012.13|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000101032.10|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000123405.8|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000204657.3|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000203116.2|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000203193.3|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000126376.8|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8
mm39_v1_chr7_-_28297565_28297610	1.52495	AAGGCAC	ENSMUST00000040531.9|Samd4b|ENSMUSG00000109336.2|sterile alpha motif domain containing 4B	ENSMUST00000108283.8|Pak4|ENSMUSG00000030602.14|p21 (RAC1) activated kinase 4
mm39_v1_chr7_-_122969064_122969144	1.52134	AAGGCAC	ENSMUST00000207010.2|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000167309.8|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000205262.2|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000106442.9|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000098060.5|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17
mm39_v1_chr7_-_144837719_144837748	1.51778	AAGGCAC	ENSMUST00000058022.6|Tpcn2|ENSMUSG00000048677.10|two pore segment channel 2
mm39_v1_chr2_+_180351910_180351994	1.51553	AAGGCAC	ENSMUST00000029090.9|Gid8|ENSMUSG00000027573.12|GID complex subunit 8
mm39_v1_chr9_+_44516140_44516218	1.5128	AAGGCAC	ENSMUST00000170489.2|Ddx6|ENSMUSG00000032097.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	ENSMUST00000217034.2|Ddx6|ENSMUSG00000032097.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm39_v1_chr1_-_192538031_192538064	1.51093	AAGGCAC	ENSMUST00000155579.8|Sertad4|ENSMUSG00000016262.15|SERTA domain containing 4
mm39_v1_chrX_+_97192356_97192388	1.5039	AAGGCAC	ENSMUST00000052837.9|Ar|ENSMUSG00000046532.9|androgen receptor
mm39_v1_chr10_+_7601760_7601778	1.50308	AAGGCAC	ENSMUST00000019929.13|Katna1|ENSMUSG00000019794.14|katanin p60 (ATPase-containing) subunit A1	ENSMUST00000165806.8|Katna1|ENSMUSG00000019794.14|katanin p60 (ATPase-containing) subunit A1
mm39_v1_chr18_-_61669641_61669665	1.50247	AAGGCAC	ENSMUST00000237557.2|Arhgef37|ENSMUSG00000045094.9|Rho guanine nucleotide exchange factor (GEF) 37	ENSMUST00000171629.3|Arhgef37|ENSMUSG00000045094.9|Rho guanine nucleotide exchange factor (GEF) 37
mm39_v1_chr7_+_27290969_27290981	1.49181	AAGGCAC	ENSMUST00000108344.9|Akt2|ENSMUSG00000004056.16|thymoma viral proto-oncogene 2
mm39_v1_chr11_+_115078299_115078393	1.48995	AAGGCAC	ENSMUST00000100235.9|Tmem104|ENSMUSG00000045980.14|transmembrane protein 104	ENSMUST00000061450.7|Tmem104|ENSMUSG00000045980.14|transmembrane protein 104
mm39_v1_chr6_-_83752749_83752808	1.48697	AAGGCAC	ENSMUST00000014892.8|Tex261|ENSMUSG00000014748.14|testis expressed gene 261
mm39_v1_chr11_-_32172233_32172314	1.48662	AAGGCAC	ENSMUST00000150381.2|Rhbdf1|ENSMUSG00000020282.19|rhomboid 5 homolog 1	ENSMUST00000144902.2|Rhbdf1|ENSMUSG00000020282.19|rhomboid 5 homolog 1	ENSMUST00000020524.15|Rhbdf1|ENSMUSG00000020282.19|rhomboid 5 homolog 1
mm39_v1_chr9_+_70114623_70114650	1.48536	AAGGCAC	ENSMUST00000034745.9|Myo1e|ENSMUSG00000032220.11|myosin IE
mm39_v1_chr14_-_103220066_103220081	1.48395	AAGGCAC	ENSMUST00000184744.2|Kctd12|ENSMUSG00000098557.2|potassium channel tetramerisation domain containing 12
mm39_v1_chr13_+_81805941_81805965	1.47974	AAGGCAC	ENSMUST00000049055.8|Lysmd3|ENSMUSG00000035840.8|LysM, putative peptidoglycan-binding, domain containing 3
mm39_v1_chrX_+_81992467_81992521	1.47315	AAGGCAC	ENSMUST00000114000.8|Dmd|ENSMUSG00000045103.20|dystrophin, muscular dystrophy
mm39_v1_chr9_+_96001415_96001491	1.46768	AAGGCAC	ENSMUST00000085217.12|Gk5|ENSMUSG00000041440.19|glycerol kinase 5 (putative)	ENSMUST00000122383.3|Gk5|ENSMUSG00000041440.19|glycerol kinase 5 (putative)
mm39_v1_chr1_-_135513443_135513555	1.45674	AAGGCAC	ENSMUST00000067414.13|Nav1|ENSMUSG00000009418.17|neuron navigator 1
mm39_v1_chr10_+_82465633_82465693	1.45553	AAGGCAC	ENSMUST00000092266.11|Tdg|ENSMUSG00000034674.19|thymine DNA glycosylase	ENSMUST00000151390.8|Tdg|ENSMUSG00000034674.19|thymine DNA glycosylase
mm39_v1_chr19_+_16110176_16110285	1.45442	AAGGCAC	ENSMUST00000025541.6|Gnaq|ENSMUSG00000024639.6|guanine nucleotide binding protein, alpha q polypeptide
mm39_v1_chr9_-_44876817_44876898	1.44434	AAGGCAC	ENSMUST00000214761.2|Ube4a|ENSMUSG00000059890.17|ubiquitination factor E4A	ENSMUST00000213666.2|Ube4a|ENSMUSG00000059890.17|ubiquitination factor E4A	ENSMUST00000213890.2|Ube4a|ENSMUSG00000059890.17|ubiquitination factor E4A	ENSMUST00000125642.8|Ube4a|ENSMUSG00000059890.17|ubiquitination factor E4A	ENSMUST00000213193.2|Ube4a|ENSMUSG00000059890.17|ubiquitination factor E4A	ENSMUST00000117506.9|Ube4a|ENSMUSG00000059890.17|ubiquitination factor E4A	ENSMUST00000138559.9|Ube4a|ENSMUSG00000059890.17|ubiquitination factor E4A	ENSMUST00000117549.8|Ube4a|ENSMUSG00000059890.17|ubiquitination factor E4A
mm39_v1_chr17_+_45874800_45874899	1.44049	AAGGCAC	ENSMUST00000224905.2|Slc35b2|ENSMUSG00000037089.12|solute carrier family 35, member B2	ENSMUST00000226086.2|Slc35b2|ENSMUSG00000037089.12|solute carrier family 35, member B2	ENSMUST00000041353.7|Slc35b2|ENSMUSG00000037089.12|solute carrier family 35, member B2
mm39_v1_chr15_+_80595486_80595541	1.43501	AAGGCAC	ENSMUST00000067689.9|Tnrc6b|ENSMUSG00000047888.11|trinucleotide repeat containing 6b
mm39_v1_chr4_+_132857816_132857901	1.43405	AAGGCAC	ENSMUST00000084241.12|Wasf2|ENSMUSG00000028868.14|WASP family, member 2	ENSMUST00000138831.2|Wasf2|ENSMUSG00000028868.14|WASP family, member 2
mm39_v1_chr1_+_180978491_180978549	1.43316	AAGGCAC	ENSMUST00000134115.8|Cnih4|ENSMUSG00000062169.14|cornichon family AMPA receptor auxiliary protein 4	ENSMUST00000111059.2|Cnih4|ENSMUSG00000062169.14|cornichon family AMPA receptor auxiliary protein 4
mm39_v1_chr2_-_26823793_26823940	1.43296	AAGGCAC	ENSMUST00000154651.2|Surf4|ENSMUSG00000014867.10|surfeit gene 4	ENSMUST00000015011.10|Surf4|ENSMUSG00000014867.10|surfeit gene 4
mm39_v1_chr18_+_74575567_74575608	1.43144	AAGGCAC	ENSMUST00000074157.13|Myo5b|ENSMUSG00000025885.19|myosin VB
mm39_v1_chr6_-_100264439_100264461	1.42442	AAGGCAC	ENSMUST00000101118.4|Rybp|ENSMUSG00000072872.4|RING1 and YY1 binding protein
mm39_v1_chr6_-_86742847_86742902	1.42292	AAGGCAC	ENSMUST00000113675.8|Anxa4|ENSMUSG00000029994.18|annexin A4
mm39_v1_chr16_+_33071784_33071826	1.41854	AAGGCAC	ENSMUST00000023502.6|Snx4|ENSMUSG00000022808.6|sorting nexin 4
mm39_v1_chr1_-_131172903_131172995	1.41744	AAGGCAC	ENSMUST00000027688.15|Rassf5|ENSMUSG00000026430.17|Ras association (RalGDS/AF-6) domain family member 5	ENSMUST00000112442.2|Rassf5|ENSMUSG00000026430.17|Ras association (RalGDS/AF-6) domain family member 5
mm39_v1_chr19_-_32365862_32365912	1.41449	AAGGCAC	ENSMUST00000099514.10|Sgms1|ENSMUSG00000040451.19|sphingomyelin synthase 1
mm39_v1_chr15_-_102630589_102630613	1.41383	AAGGCAC	ENSMUST00000023818.11|Calcoco1|ENSMUSG00000023055.11|calcium binding and coiled coil domain 1
mm39_v1_chr7_+_114317877_114317910	1.40716	AAGGCAC	ENSMUST00000032902.11|Calcb|ENSMUSG00000030666.12|calcitonin-related polypeptide, beta	ENSMUST00000182816.2|Calcb|ENSMUSG00000030666.12|calcitonin-related polypeptide, beta
mm39_v1_chr8_+_106627053_106627099	1.40626	AAGGCAC	ENSMUST00000049699.9|Pskh1|ENSMUSG00000048310.9|protein serine kinase H1
mm39_v1_chr11_+_96256565_96256578	1.40446	AAGGCAC	ENSMUST00000019117.3|Hoxb1|ENSMUSG00000018973.3|homeobox B1
mm39_v1_chr1_+_92759324_92759367	1.40291	AAGGCAC	ENSMUST00000045970.8|Gpc1|ENSMUSG00000034220.8|glypican 1
mm39_v1_chr2_-_72810782_72810811	1.38831	AAGGCAC	ENSMUST00000102689.10|Sp3|ENSMUSG00000027109.17|trans-acting transcription factor 3
mm39_v1_chr9_+_13739003_13739075	1.37493	AAGGCAC	ENSMUST00000059579.12|Fam76b|ENSMUSG00000037808.14|family with sequence similarity 76, member B
mm39_v1_chr18_-_47501897_47501945	1.3704	AAGGCAC	ENSMUST00000019791.14|Sema6a|ENSMUSG00000019647.17|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	ENSMUST00000115449.9|Sema6a|ENSMUSG00000019647.17|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm39_v1_chr9_+_57468217_57468274	1.36907	AAGGCAC	ENSMUST00000045791.11|Scamp2|ENSMUSG00000040188.11|secretory carrier membrane protein 2	ENSMUST00000216986.2|Scamp2|ENSMUSG00000040188.11|secretory carrier membrane protein 2
mm39_v1_chr11_-_120472379_120472452	1.36801	AAGGCAC	ENSMUST00000106197.10|Arhgdia|ENSMUSG00000025132.14|Rho GDP dissociation inhibitor (GDI) alpha
mm39_v1_chr10_-_8761777_8761821	1.3506	AAGGCAC	ENSMUST00000015449.6|Sash1|ENSMUSG00000015305.7|SAM and SH3 domain containing 1
mm39_v1_chr10_+_69932930_69933066	1.34444	AAGGCAC	ENSMUST00000147545.8|Ccdc6|ENSMUSG00000048701.14|coiled-coil domain containing 6
mm39_v1_chrX_+_55391749_55391775	1.34417	AAGGCAC	ENSMUST00000101560.4|Zfp449|ENSMUSG00000073176.5|zinc finger protein 449
mm39_v1_chr18_-_38068456_38068529	1.34253	AAGGCAC	ENSMUST00000080033.7|Diaph1|ENSMUSG00000024456.17|diaphanous related formin 1	ENSMUST00000115631.8|Diaph1|ENSMUSG00000024456.17|diaphanous related formin 1	ENSMUST00000115634.8|Diaph1|ENSMUSG00000024456.17|diaphanous related formin 1
mm39_v1_chr7_+_101619019_101619047	1.33245	AAGGCAC	ENSMUST00000084852.13|Numa1|ENSMUSG00000066306.14|nuclear mitotic apparatus protein 1
mm39_v1_chr7_+_19095111_19095189	1.32999	AAGGCAC	ENSMUST00000047621.14|Ppp1r13l|ENSMUSG00000040734.15|protein phosphatase 1, regulatory subunit 13 like
mm39_v1_chr12_-_73160181_73160230	1.32782	AAGGCAC	ENSMUST00000043208.8|Six4|ENSMUSG00000034460.10|sine oculis-related homeobox 4	ENSMUST00000175693.3|Six4|ENSMUSG00000034460.10|sine oculis-related homeobox 4
mm39_v1_chr5_+_52898910_52898965	1.311	AAGGCAC	ENSMUST00000031081.11|Pi4k2b|ENSMUSG00000029186.13|phosphatidylinositol 4-kinase type 2 beta	ENSMUST00000031082.8|Pi4k2b|ENSMUSG00000029186.13|phosphatidylinositol 4-kinase type 2 beta
mm39_v1_chr10_+_11157047_11157103	1.30378	AAGGCAC	ENSMUST00000129456.8|Fbxo30|ENSMUSG00000047648.14|F-box protein 30
mm39_v1_chr17_-_44416665_44416747	1.30375	AAGGCAC	ENSMUST00000024757.14|Enpp4|ENSMUSG00000023961.17|ectonucleotide pyrophosphatase/phosphodiesterase 4
mm39_v1_chr11_+_57692399_57692475	1.30247	AAGGCAC	ENSMUST00000020826.6|Sap30l|ENSMUSG00000020519.6|SAP30-like
mm39_v1_chr8_+_105897300_105897446	1.29728	AAGGCAC	ENSMUST00000052209.9|Cbfb|ENSMUSG00000031885.15|core binding factor beta	ENSMUST00000109392.9|Cbfb|ENSMUSG00000031885.15|core binding factor beta	ENSMUST00000109395.8|Cbfb|ENSMUSG00000031885.15|core binding factor beta
mm39_v1_chr12_+_24881582_24881657	1.29636	AAGGCAC	ENSMUST00000221952.2|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2	ENSMUST00000078902.8|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2	ENSMUST00000110942.11|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2
mm39_v1_chr18_+_52900767_52900809	1.28121	AAGGCAC	ENSMUST00000115410.9|Sncaip|ENSMUSG00000024534.16|synuclein, alpha interacting protein (synphilin)	ENSMUST00000178678.8|Sncaip|ENSMUSG00000024534.16|synuclein, alpha interacting protein (synphilin)
mm39_v1_chr16_-_92262969_92263075	1.27808	AAGGCAC	ENSMUST00000232239.2|Rcan1|ENSMUSG00000022951.17|regulator of calcineurin 1	ENSMUST00000060005.15|Rcan1|ENSMUSG00000022951.17|regulator of calcineurin 1
mm39_v1_chr3_-_105708632_105708694	1.27664	AAGGCAC	ENSMUST00000090678.11|Rap1a|ENSMUSG00000068798.11|RAS-related protein 1a
mm39_v1_chr9_-_48747232_48747262	1.27419	AAGGCAC	ENSMUST00000093852.5|Zbtb16|ENSMUSG00000066687.6|zinc finger and BTB domain containing 16
mm39_v1_chr19_-_24202344_24202438	1.27323	AAGGCAC	ENSMUST00000099558.5|Tjp2|ENSMUSG00000024812.12|tight junction protein 2	ENSMUST00000232956.2|Tjp2|ENSMUSG00000024812.12|tight junction protein 2
mm39_v1_chr11_-_106378622_106378648	1.26967	AAGGCAC	ENSMUST00000001059.9|Ern1|ENSMUSG00000020715.10|endoplasmic reticulum (ER) to nucleus signalling 1	ENSMUST00000106799.2|Ern1|ENSMUSG00000020715.10|endoplasmic reticulum (ER) to nucleus signalling 1	ENSMUST00000106800.2|Ern1|ENSMUSG00000020715.10|endoplasmic reticulum (ER) to nucleus signalling 1
mm39_v1_chr7_-_126613707_126613793	1.26302	AAGGCAC	ENSMUST00000165096.9|Mvp|ENSMUSG00000030681.19|major vault protein
mm39_v1_chr2_+_119378178_119378213	1.26057	AAGGCAC	ENSMUST00000014221.13|Chp1|ENSMUSG00000014077.14|calcineurin-like EF hand protein 1	ENSMUST00000119172.2|Chp1|ENSMUSG00000014077.14|calcineurin-like EF hand protein 1
mm39_v1_chr9_-_62029877_62029900	1.25751	AAGGCAC	ENSMUST00000185675.7|Glce|ENSMUSG00000032252.15|glucuronyl C5-epimerase
mm39_v1_chr8_-_87611849_87611935	1.25652	AAGGCAC	ENSMUST00000034074.8|N4bp1|ENSMUSG00000031652.12|NEDD4 binding protein 1
mm39_v1_chr10_-_75353157_75353215	1.25613	AAGGCAC	ENSMUST00000039796.14|Gucd1|ENSMUSG00000033416.16|guanylyl cyclase domain containing 1
mm39_v1_chr11_-_100830183_100830262	1.2419	AAGGCAC	ENSMUST00000092671.12|Stat3|ENSMUSG00000004040.17|signal transducer and activator of transcription 3	ENSMUST00000103114.8|Stat3|ENSMUSG00000004040.17|signal transducer and activator of transcription 3
mm39_v1_chr1_-_36484328_36484352	1.23128	AAGGCAC	ENSMUST00000125304.8|Lman2l|ENSMUSG00000001143.14|lectin, mannose-binding 2-like	ENSMUST00000115011.8|Lman2l|ENSMUSG00000001143.14|lectin, mannose-binding 2-like
mm39_v1_chr11_-_86435579_86435631	1.23076	AAGGCAC	ENSMUST00000138810.3|Rps6kb1|ENSMUSG00000020516.16|ribosomal protein S6 kinase, polypeptide 1	ENSMUST00000058286.9|Rps6kb1|ENSMUSG00000020516.16|ribosomal protein S6 kinase, polypeptide 1	ENSMUST00000154617.8|Rps6kb1|ENSMUSG00000020516.16|ribosomal protein S6 kinase, polypeptide 1
mm39_v1_chr2_+_101508747_101508815	1.22554	AAGGCAC	ENSMUST00000004949.8|Traf6|ENSMUSG00000027164.9|TNF receptor-associated factor 6
mm39_v1_chr4_+_59189239_59189257	1.22536	AAGGCAC	ENSMUST00000030074.8|Ugcg|ENSMUSG00000028381.9|UDP-glucose ceramide glucosyltransferase
mm39_v1_chr7_+_110371811_110371962	1.21932	AAGGCAC	ENSMUST00000005829.13|Ampd3|ENSMUSG00000005686.18|adenosine monophosphate deaminase 3
mm39_v1_chr2_+_122580415_122580521	1.21762	AAGGCAC	ENSMUST00000005954.9|Bloc1s6|ENSMUSG00000005804.15|biogenesis of lysosomal organelles complex-1, subunit 6, pallidin
mm39_v1_chr12_-_86931529_86931580	1.21443	AAGGCAC	ENSMUST00000038422.8|Irf2bpl|ENSMUSG00000034168.8|interferon regulatory factor 2 binding protein-like
mm39_v1_chr14_+_60872167_60872226	1.19957	AAGGCAC	ENSMUST00000022566.14|Spata13|ENSMUSG00000021990.17|spermatogenesis associated 13	ENSMUST00000159729.2|Spata13|ENSMUSG00000021990.17|spermatogenesis associated 13
mm39_v1_chr10_-_61288437_61288589	1.19366	AAGGCAC	ENSMUST00000167087.2|Eif4ebp2|ENSMUSG00000020091.16|eukaryotic translation initiation factor 4E binding protein 2	ENSMUST00000020288.15|Eif4ebp2|ENSMUSG00000020091.16|eukaryotic translation initiation factor 4E binding protein 2
mm39_v1_chr16_+_84571011_84571033	1.19287	AAGGCAC	ENSMUST00000114195.8|Jam2|ENSMUSG00000053062.17|junction adhesion molecule 2
mm39_v1_chr16_-_4377640_4377718	1.18933	AAGGCAC	ENSMUST00000005862.9|Tfap4|ENSMUSG00000005718.9|transcription factor AP4
mm39_v1_chr2_+_127967951_127967976	1.18388	AAGGCAC	ENSMUST00000089634.12|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)	ENSMUST00000019281.14|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)	ENSMUST00000110341.9|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)	ENSMUST00000103211.8|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)	ENSMUST00000103210.2|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)
mm39_v1_chr2_+_152753231_152753286	1.18305	AAGGCAC	ENSMUST00000028970.8|Mylk2|ENSMUSG00000027470.10|myosin, light polypeptide kinase 2, skeletal muscle
mm39_v1_chr5_-_121329385_121329501	1.18292	AAGGCAC	ENSMUST00000054547.9|Ptpn11|ENSMUSG00000043733.15|protein tyrosine phosphatase, non-receptor type 11	ENSMUST00000100770.9|Ptpn11|ENSMUSG00000043733.15|protein tyrosine phosphatase, non-receptor type 11
mm39_v1_chr3_-_94693780_94693826	1.17384	AAGGCAC	ENSMUST00000107273.9|Cgn|ENSMUSG00000068876.17|cingulin	ENSMUST00000238849.2|Cgn|ENSMUSG00000068876.17|cingulin
mm39_v1_chr17_-_29226965_29226976	1.16961	AAGGCAC	ENSMUST00000009138.13|Stk38|ENSMUSG00000024006.18|serine/threonine kinase 38	ENSMUST00000119274.3|Stk38|ENSMUSG00000024006.18|serine/threonine kinase 38
mm39_v1_chr11_+_105975403_105975449	1.1696	AAGGCAC	ENSMUST00000002044.10|Map3k3|ENSMUSG00000020700.12|mitogen-activated protein kinase kinase kinase 3
mm39_v1_chr13_-_65260716_65260803	1.16323	AAGGCAC	ENSMUST00000054730.10|Mfsd14b|ENSMUSG00000038212.17|major facilitator superfamily domain containing 14B	ENSMUST00000155487.8|Mfsd14b|ENSMUSG00000038212.17|major facilitator superfamily domain containing 14B
mm39_v1_chr10_-_79938487_79938562	1.16228	AAGGCAC	ENSMUST00000042771.8|Sbno2|ENSMUSG00000035673.11|strawberry notch 2
mm39_v1_chr7_+_130179063_130179214	1.15084	AAGGCAC	ENSMUST00000207918.2|Tacc2|ENSMUSG00000030852.19|transforming, acidic coiled-coil containing protein 2	ENSMUST00000215492.2|Tacc2|ENSMUSG00000030852.19|transforming, acidic coiled-coil containing protein 2	ENSMUST00000084513.12|Tacc2|ENSMUSG00000030852.19|transforming, acidic coiled-coil containing protein 2	ENSMUST00000059145.14|Tacc2|ENSMUSG00000030852.19|transforming, acidic coiled-coil containing protein 2
mm39_v1_chr2_-_91762033_91762069	1.14783	AAGGCAC	ENSMUST00000111309.8|Mdk|ENSMUSG00000027239.15|midkine	ENSMUST00000090602.6|Mdk|ENSMUSG00000027239.15|midkine
mm39_v1_chr7_-_25358406_25358406	1.14418	AAGGCAC	ENSMUST00000071329.8|Bckdha|ENSMUSG00000060376.8|branched chain ketoacid dehydrogenase E1, alpha polypeptide
mm39_v1_chr1_-_37580084_37580128	1.14264	AAGGCAC	ENSMUST00000151952.8|Mgat4a|ENSMUSG00000026110.16|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm39_v1_chrX_-_107877909_107877987	1.14148	AAGGCAC	ENSMUST00000101283.4|Brwd3|ENSMUSG00000063663.12|bromodomain and WD repeat domain containing 3	ENSMUST00000150434.8|Brwd3|ENSMUSG00000063663.12|bromodomain and WD repeat domain containing 3
mm39_v1_chr11_-_51891259_51891311	1.14063	AAGGCAC	ENSMUST00000020657.13|Ube2b|ENSMUSG00000020390.13|ubiquitin-conjugating enzyme E2B
mm39_v1_chr2_-_18397547_18397649	1.12996	AAGGCAC	ENSMUST00000091418.12|Dnajc1|ENSMUSG00000026740.13|DnaJ heat shock protein family (Hsp40) member C1	ENSMUST00000166495.8|Dnajc1|ENSMUSG00000026740.13|DnaJ heat shock protein family (Hsp40) member C1
mm39_v1_chr6_-_108162513_108162548	1.12274	AAGGCAC	ENSMUST00000167338.8|Sumf1|ENSMUSG00000030101.16|sulfatase modifying factor 1	ENSMUST00000172188.2|Sumf1|ENSMUSG00000030101.16|sulfatase modifying factor 1	ENSMUST00000032191.16|Sumf1|ENSMUSG00000030101.16|sulfatase modifying factor 1
mm39_v1_chr4_+_152358648_152358819	1.10731	AAGGCAC	ENSMUST00000105650.8|Gpr153|ENSMUSG00000042804.14|G protein-coupled receptor 153	ENSMUST00000105651.8|Gpr153|ENSMUSG00000042804.14|G protein-coupled receptor 153
mm39_v1_chr5_+_114912738_114912738	1.09897	AAGGCAC	ENSMUST00000102578.11|Ankrd13a|ENSMUSG00000041870.18|ankyrin repeat domain 13a
mm39_v1_chr8_+_85635189_85635285	1.09582	AAGGCAC	ENSMUST00000003910.13|Dnase2a|ENSMUSG00000003812.14|deoxyribonuclease II alpha	ENSMUST00000109744.8|Dnase2a|ENSMUSG00000003812.14|deoxyribonuclease II alpha
mm39_v1_chr6_+_29348068_29348123	1.09481	AAGGCAC	ENSMUST00000173216.8|Calu|ENSMUSG00000029767.17|calumenin	ENSMUST00000173694.5|Calu|ENSMUSG00000029767.17|calumenin	ENSMUST00000172974.8|Calu|ENSMUSG00000029767.17|calumenin	ENSMUST00000031779.17|Calu|ENSMUSG00000029767.17|calumenin	ENSMUST00000090481.14|Calu|ENSMUSG00000029767.17|calumenin
mm39_v1_chr17_+_28910302_28910316	1.07796	AAGGCAC	ENSMUST00000004990.14|Mapk14|ENSMUSG00000053436.16|mitogen-activated protein kinase 14	ENSMUST00000114754.8|Mapk14|ENSMUSG00000053436.16|mitogen-activated protein kinase 14	ENSMUST00000062694.16|Mapk14|ENSMUSG00000053436.16|mitogen-activated protein kinase 14
mm39_v1_chr4_+_128887017_128887127	1.07783	AAGGCAC	ENSMUST00000030583.13|Ak2|ENSMUSG00000028792.15|adenylate kinase 2	ENSMUST00000102604.11|Ak2|ENSMUSG00000028792.15|adenylate kinase 2
mm39_v1_chr15_+_10177709_10177741	1.07716	AAGGCAC	ENSMUST00000124470.8|Prlr|ENSMUSG00000005268.21|prolactin receptor
mm39_v1_chr15_+_12205095_12205124	1.07531	AAGGCAC	ENSMUST00000038172.16|Mtmr12|ENSMUSG00000039458.16|myotubularin related protein 12
mm39_v1_chr14_-_104081827_104081839	1.07112	AAGGCAC	ENSMUST00000022718.11|Ednrb|ENSMUSG00000022122.16|endothelin receptor type B
mm39_v1_chr1_+_155911136_155911177	1.06352	AAGGCAC	ENSMUST00000111757.10|Tor1aip2|ENSMUSG00000050565.17|torsin A interacting protein 2
mm39_v1_chr10_-_80269436_80269488	1.06061	AAGGCAC	ENSMUST00000105346.10|Tcf3|ENSMUSG00000020167.15|transcription factor 3	ENSMUST00000020377.13|Tcf3|ENSMUSG00000020167.15|transcription factor 3	ENSMUST00000105340.8|Tcf3|ENSMUSG00000020167.15|transcription factor 3	ENSMUST00000020379.13|Tcf3|ENSMUSG00000020167.15|transcription factor 3	ENSMUST00000105344.8|Tcf3|ENSMUSG00000020167.15|transcription factor 3	ENSMUST00000105342.8|Tcf3|ENSMUSG00000020167.15|transcription factor 3	ENSMUST00000105345.10|Tcf3|ENSMUSG00000020167.15|transcription factor 3	ENSMUST00000105343.8|Tcf3|ENSMUSG00000020167.15|transcription factor 3
mm39_v1_chr19_+_10666085_10666184	1.05369	AAGGCAC	ENSMUST00000237240.2|Vps37c|ENSMUSG00000048832.10|vacuolar protein sorting 37C	ENSMUST00000235927.2|Vps37c|ENSMUSG00000048832.10|vacuolar protein sorting 37C	ENSMUST00000087951.7|Vps37c|ENSMUSG00000048832.10|vacuolar protein sorting 37C	ENSMUST00000237437.2|Vps37c|ENSMUSG00000048832.10|vacuolar protein sorting 37C	ENSMUST00000235921.2|Vps37c|ENSMUSG00000048832.10|vacuolar protein sorting 37C
mm39_v1_chr12_+_80690985_80691023	1.04983	AAGGCAC	ENSMUST00000219405.2|Slc39a9|ENSMUSG00000048833.10|solute carrier family 39 (zinc transporter), member 9	ENSMUST00000085245.7|Slc39a9|ENSMUSG00000048833.10|solute carrier family 39 (zinc transporter), member 9
mm39_v1_chr7_-_27055405_27055444	1.04515	AAGGCAC	ENSMUST00000003857.7|Shkbp1|ENSMUSG00000089832.9|Sh3kbp1 binding protein 1
mm39_v1_chr6_+_72332423_72332444	1.03984	AAGGCAC	ENSMUST00000069695.9|Tmem150a|ENSMUSG00000055912.9|transmembrane protein 150A	ENSMUST00000132243.3|Tmem150a|ENSMUSG00000055912.9|transmembrane protein 150A
mm39_v1_chr14_+_30723340_30723364	1.03431	AAGGCAC	ENSMUST00000168584.9|Glt8d1|ENSMUSG00000021916.17|glycosyltransferase 8 domain containing 1	ENSMUST00000226378.2|Glt8d1|ENSMUSG00000021916.17|glycosyltransferase 8 domain containing 1
mm39_v1_chr7_-_34755985_34756002	1.02794	AAGGCAC	ENSMUST00000130491.3|Cebpg|ENSMUSG00000056216.10|CCAAT/enhancer binding protein (C/EBP), gamma
mm39_v1_chr13_+_31740117_31740117	1.02773	AAGGCAC	ENSMUST00000042118.11|Foxq1|ENSMUSG00000038415.11|forkhead box Q1
mm39_v1_chr12_-_35584968_35585059	1.02456	AAGGCAC	ENSMUST00000116436.9|Ahr|ENSMUSG00000019256.18|aryl-hydrocarbon receptor
mm39_v1_chr4_-_133615075_133615116	1.02279	AAGGCAC	ENSMUST00000003741.16|Rps6ka1|ENSMUSG00000003644.18|ribosomal protein S6 kinase polypeptide 1	ENSMUST00000105894.11|Rps6ka1|ENSMUSG00000003644.18|ribosomal protein S6 kinase polypeptide 1
mm39_v1_chrX_-_138772383_138772426	1.01767	AAGGCAC	ENSMUST00000033811.14|Morc4|ENSMUSG00000031434.16|microrchidia 4	ENSMUST00000087401.12|Morc4|ENSMUSG00000031434.16|microrchidia 4
mm39_v1_chr2_+_60040231_60040288	1.01204	AAGGCAC	ENSMUST00000102748.11|Marchf7|ENSMUSG00000026977.18|membrane associated ring-CH-type finger 7
mm39_v1_chr11_+_57536260_57536315	1.01014	AAGGCAC	ENSMUST00000066987.14|Galnt10|ENSMUSG00000020520.15|polypeptide N-acetylgalactosaminyltransferase 10	ENSMUST00000108846.2|Galnt10|ENSMUSG00000020520.15|polypeptide N-acetylgalactosaminyltransferase 10
mm39_v1_chr12_+_71356632_71356758	1.00627	AAGGCAC	ENSMUST00000061273.12|Dact1|ENSMUSG00000044548.12|dishevelled-binding antagonist of beta-catenin 1	ENSMUST00000150639.2|Dact1|ENSMUSG00000044548.12|dishevelled-binding antagonist of beta-catenin 1
mm39_v1_chr17_-_79662514_79662525	1.00626	AAGGCAC	ENSMUST00000068958.9|Cdc42ep3|ENSMUSG00000036533.10|CDC42 effector protein (Rho GTPase binding) 3
mm39_v1_chr15_-_37007623_37007646	1.00069	AAGGCAC	ENSMUST00000078976.9|Zfp706|ENSMUSG00000062397.9|zinc finger protein 706
mm39_v1_chr1_-_60605867_60605938	1.00052	AAGGCAC	ENSMUST00000027168.12|Raph1|ENSMUSG00000026014.16|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	ENSMUST00000090293.11|Raph1|ENSMUSG00000026014.16|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	ENSMUST00000140485.8|Raph1|ENSMUSG00000026014.16|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
mm39_v1_chr12_-_69771604_69771659	0.99727	AAGGCAC	ENSMUST00000021370.10|L2hgdh|ENSMUSG00000020988.10|L-2-hydroxyglutarate dehydrogenase
mm39_v1_chr10_-_81262948_81263021	0.988432	AAGGCAC	ENSMUST00000078185.14|Nfic|ENSMUSG00000055053.19|nuclear factor I/C	ENSMUST00000020461.15|Nfic|ENSMUSG00000055053.19|nuclear factor I/C	ENSMUST00000105321.10|Nfic|ENSMUSG00000055053.19|nuclear factor I/C
mm39_v1_chr1_+_121358778_121358853	0.980551	AAGGCAC	ENSMUST00000036025.16|Ccdc93|ENSMUSG00000026339.19|coiled-coil domain containing 93	ENSMUST00000112621.2|Ccdc93|ENSMUSG00000026339.19|coiled-coil domain containing 93
mm39_v1_chr5_+_137627376_137627383	0.968568	AAGGCAC	ENSMUST00000031734.16|Lrch4|ENSMUSG00000093445.8|leucine-rich repeats and calponin homology (CH) domain containing 4
mm39_v1_chr2_-_59955995_59956119	0.963539	AAGGCAC	ENSMUST00000112550.8|Baz2b|ENSMUSG00000026987.17|bromodomain adjacent to zinc finger domain, 2B
mm39_v1_chr9_-_78495250_78495330	0.961093	AAGGCAC	ENSMUST00000117645.8|Slc17a5|ENSMUSG00000049624.15|solute carrier family 17 (anion/sugar transporter), member 5	ENSMUST00000052441.12|Slc17a5|ENSMUSG00000049624.15|solute carrier family 17 (anion/sugar transporter), member 5
mm39_v1_chr7_+_73390026_73390081	0.959983	AAGGCAC	ENSMUST00000107456.4|Fam174b|ENSMUSG00000078670.4|family with sequence similarity 174, member B
mm39_v1_chr4_-_109333866_109333924	0.954698	AAGGCAC	ENSMUST00000030284.10|Rnf11|ENSMUSG00000028557.11|ring finger protein 11
mm39_v1_chr3_+_151916059_151916102	0.954614	AAGGCAC	ENSMUST00000166984.8|Fubp1|ENSMUSG00000028034.16|far upstream element (FUSE) binding protein 1
mm39_v1_chr7_+_49408847_49408914	0.947172	AAGGCAC	ENSMUST00000085272.7|Htatip2|ENSMUSG00000039745.9|HIV-1 Tat interactive protein 2	ENSMUST00000207895.2|Htatip2|ENSMUSG00000039745.9|HIV-1 Tat interactive protein 2
mm39_v1_chr6_-_113508536_113508628	0.945381	AAGGCAC	ENSMUST00000032425.7|Emc3|ENSMUSG00000030286.7|ER membrane protein complex subunit 3
mm39_v1_chr5_+_99002293_99002325	0.938121	AAGGCAC	ENSMUST00000031278.6|Bmp3|ENSMUSG00000029335.6|bone morphogenetic protein 3	ENSMUST00000200388.2|Bmp3|ENSMUSG00000029335.6|bone morphogenetic protein 3
mm39_v1_chr4_-_21685781_21685805	0.93204	AAGGCAC	ENSMUST00000076206.11|Prdm13|ENSMUSG00000040478.15|PR domain containing 13
mm39_v1_chr7_-_46658144_46658169	0.925996	AAGGCAC	ENSMUST00000061639.10|Spty2d1|ENSMUSG00000049516.10|SPT2 chromatin protein domain containing 1
mm39_v1_chr16_-_63684477_63684545	0.925715	AAGGCAC	ENSMUST00000232654.2|Epha3|ENSMUSG00000052504.8|Eph receptor A3	ENSMUST00000064405.8|Epha3|ENSMUSG00000052504.8|Eph receptor A3
mm39_v1_chr5_-_114131934_114131964	0.925661	AAGGCAC	ENSMUST00000159592.8|Ssh1|ENSMUSG00000042121.17|slingshot protein phosphatase 1
mm39_v1_chr11_+_53241561_53241660	0.920975	AAGGCAC	ENSMUST00000060945.12|Aff4|ENSMUSG00000049470.14|AF4/FMR2 family, member 4
mm39_v1_chrX_-_52358663_52358735	0.91856	AAGGCAC	ENSMUST00000114841.2|Fam122b|ENSMUSG00000036022.16|family with sequence similarity 122, member B	ENSMUST00000071023.12|Fam122b|ENSMUSG00000036022.16|family with sequence similarity 122, member B
mm39_v1_chr6_-_148732946_148732992	0.916825	AAGGCAC	ENSMUST00000048418.14|Ipo8|ENSMUSG00000040029.16|importin 8
mm39_v1_chr11_-_74787877_74787920	0.916756	AAGGCAC	ENSMUST00000057631.12|Sgsm2|ENSMUSG00000038351.15|small G protein signaling modulator 2	ENSMUST00000081799.6|Sgsm2|ENSMUSG00000038351.15|small G protein signaling modulator 2
mm39_v1_chr8_-_64659004_64659045	0.915259	AAGGCAC	ENSMUST00000066166.6|Tll1|ENSMUSG00000053626.6|tolloid-like
mm39_v1_chr13_-_18118736_18118824	0.900715	AAGGCAC	ENSMUST00000009003.9|Rala|ENSMUSG00000008859.9|v-ral simian leukemia viral oncogene A (ras related)
mm39_v1_chr8_+_11808349_11808375	0.885482	AAGGCAC	ENSMUST00000074856.13|Arhgef7|ENSMUSG00000031511.17|Rho guanine nucleotide exchange factor (GEF7)	ENSMUST00000098938.9|Arhgef7|ENSMUSG00000031511.17|Rho guanine nucleotide exchange factor (GEF7)
mm39_v1_chr11_+_20493306_20493338	0.880623	AAGGCAC	ENSMUST00000093292.11|Sertad2|ENSMUSG00000049800.14|SERTA domain containing 2
mm39_v1_chr11_+_110956980_110957000	0.877546	AAGGCAC	ENSMUST00000042970.3|Kcnj2|ENSMUSG00000041695.3|potassium inwardly-rectifying channel, subfamily J, member 2
mm39_v1_chr1_-_165462020_165462110	0.877403	AAGGCAC	ENSMUST00000194437.6|Mpzl1|ENSMUSG00000026566.16|myelin protein zero-like 1	ENSMUST00000068705.13|Mpzl1|ENSMUSG00000026566.16|myelin protein zero-like 1	ENSMUST00000111435.9|Mpzl1|ENSMUSG00000026566.16|myelin protein zero-like 1	ENSMUST00000193023.2|Mpzl1|ENSMUSG00000026566.16|myelin protein zero-like 1
mm39_v1_chr3_-_116601815_116601849	0.876712	AAGGCAC	ENSMUST00000040603.14|Agl|ENSMUSG00000033400.15|amylo-1,6-glucosidase, 4-alpha-glucanotransferase
mm39_v1_chr8_-_107064615_107064640	0.872609	AAGGCAC	ENSMUST00000067512.8|Smpd3|ENSMUSG00000031906.10|sphingomyelin phosphodiesterase 3, neutral
mm39_v1_chr16_+_58548273_58548426	0.871013	AAGGCAC	ENSMUST00000023426.12|Cldnd1|ENSMUSG00000022744.13|claudin domain containing 1	ENSMUST00000162057.8|Cldnd1|ENSMUSG00000022744.13|claudin domain containing 1	ENSMUST00000162191.2|Cldnd1|ENSMUSG00000022744.13|claudin domain containing 1
mm39_v1_chr8_-_105122397_105122490	0.868547	AAGGCAC	ENSMUST00000179802.2|Cmtm4|ENSMUSG00000096188.2|CKLF-like MARVEL transmembrane domain containing 4
mm39_v1_chr10_+_80330669_80330714	0.864823	AAGGCAC	ENSMUST00000051773.9|Onecut3|ENSMUSG00000045518.9|one cut domain, family member 3
mm39_v1_chr2_-_153083322_153083346	0.864762	AAGGCAC	ENSMUST00000056924.14|Plagl2|ENSMUSG00000051413.18|pleiomorphic adenoma gene-like 2
mm39_v1_chr14_-_14651778_14651816	0.863175	AAGGCAC	ENSMUST00000052678.9|Flnb|ENSMUSG00000025278.10|filamin, beta
mm39_v1_chr7_+_63937413_63937424	0.859025	AAGGCAC	ENSMUST00000032736.11|Mtmr10|ENSMUSG00000030522.15|myotubularin related protein 10
mm39_v1_chr15_+_88635852_88635863	0.848124	AAGGCAC	ENSMUST00000041297.15|Zbed4|ENSMUSG00000034333.16|zinc finger, BED type containing 4
mm39_v1_chr11_-_76289888_76290010	0.844763	AAGGCAC	ENSMUST00000021204.4|Nxn|ENSMUSG00000020844.7|nucleoredoxin
mm39_v1_chr4_-_82423985_82424044	0.839958	AAGGCAC	ENSMUST00000107245.9|Nfib|ENSMUSG00000008575.18|nuclear factor I/B	ENSMUST00000107246.2|Nfib|ENSMUSG00000008575.18|nuclear factor I/B
mm39_v1_chr15_-_66985760_66985841	0.827254	AAGGCAC	ENSMUST00000092640.6|St3gal1|ENSMUSG00000013846.11|ST3 beta-galactoside alpha-2,3-sialyltransferase 1
mm39_v1_chr14_-_68170873_68170899	0.821128	AAGGCAC	ENSMUST00000039135.6|Dock5|ENSMUSG00000044447.6|dedicator of cytokinesis 5
mm39_v1_chr6_+_146992877_146993036	0.8203	AAGGCAC	ENSMUST00000036003.8|Klhl42|ENSMUSG00000040102.11|kelch-like 42
mm39_v1_chr5_+_93241287_93241310	0.815756	AAGGCAC	ENSMUST00000074733.11|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000201700.4|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000202196.4|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000202308.4|Septin11|ENSMUSG00000058013.12|septin 11
mm39_v1_chr1_-_136888118_136888234	0.815506	AAGGCAC	ENSMUST00000192357.6|Nr5a2|ENSMUSG00000026398.15|nuclear receptor subfamily 5, group A, member 2	ENSMUST00000027649.14|Nr5a2|ENSMUSG00000026398.15|nuclear receptor subfamily 5, group A, member 2
mm39_v1_chr10_-_116417333_116417416	0.814619	AAGGCAC	ENSMUST00000218744.2|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000105267.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000105265.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000167706.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000168036.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000169921.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000020374.6|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2
mm39_v1_chr14_+_121272950_121272990	0.805537	AAGGCAC	ENSMUST00000026635.8|Farp1|ENSMUSG00000025555.15|FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
mm39_v1_chr10_-_62628008_62628070	0.801792	AAGGCAC	ENSMUST00000217768.2|Ccar1|ENSMUSG00000020074.8|cell division cycle and apoptosis regulator 1	ENSMUST00000020268.7|Ccar1|ENSMUSG00000020074.8|cell division cycle and apoptosis regulator 1	ENSMUST00000218946.2|Ccar1|ENSMUSG00000020074.8|cell division cycle and apoptosis regulator 1	ENSMUST00000219527.2|Ccar1|ENSMUSG00000020074.8|cell division cycle and apoptosis regulator 1
mm39_v1_chr5_-_124669371_124669457	0.801448	AAGGCAC	ENSMUST00000062153.12|Rilpl1|ENSMUSG00000029392.13|Rab interacting lysosomal protein-like 1
mm39_v1_chr13_+_9143995_9144018	0.801082	AAGGCAC	ENSMUST00000091829.4|Larp4b|ENSMUSG00000033499.15|La ribonucleoprotein domain family, member 4B
mm39_v1_chr17_-_13211075_13211146	0.798885	AAGGCAC	ENSMUST00000159986.8|Wtap|ENSMUSG00000060475.14|Wilms tumour 1-associating protein	ENSMUST00000007007.14|Wtap|ENSMUSG00000060475.14|Wilms tumour 1-associating protein
mm39_v1_chr16_+_4867876_4867992	0.798652	AAGGCAC	ENSMUST00000230703.2|Ubn1|ENSMUSG00000039473.9|ubinuclein 1	ENSMUST00000052449.6|Ubn1|ENSMUSG00000039473.9|ubinuclein 1
mm39_v1_chr18_-_55123153_55123238	0.791288	AAGGCAC	ENSMUST00000064763.7|Zfp608|ENSMUSG00000052713.10|zinc finger protein 608
mm39_v1_chr5_+_124767114_124767162	0.789115	AAGGCAC	ENSMUST00000037865.13|Atp6v0a2|ENSMUSG00000038023.13|ATPase, H+ transporting, lysosomal V0 subunit A2
mm39_v1_chr8_+_111821262_111821273	0.787724	AAGGCAC	ENSMUST00000135302.8|Pdpr|ENSMUSG00000033624.11|pyruvate dehydrogenase phosphatase regulatory subunit	ENSMUST00000039333.10|Pdpr|ENSMUSG00000033624.11|pyruvate dehydrogenase phosphatase regulatory subunit
mm39_v1_chr2_+_30254239_30254316	0.785653	AAGGCAC	ENSMUST00000077977.14|Miga2|ENSMUSG00000026858.19|mitoguardin 2	ENSMUST00000140075.9|Miga2|ENSMUSG00000026858.19|mitoguardin 2	ENSMUST00000142801.8|Miga2|ENSMUSG00000026858.19|mitoguardin 2	ENSMUST00000100214.10|Miga2|ENSMUSG00000026858.19|mitoguardin 2
mm39_v1_chr5_-_18565353_18565395	0.784471	AAGGCAC	ENSMUST00000074694.7|Gnai1|ENSMUSG00000057614.7|guanine nucleotide binding protein (G protein), alpha inhibiting 1
mm39_v1_chrX_+_72760183_72760224	0.783297	AAGGCAC	ENSMUST00000002084.14|Abcd1|ENSMUSG00000031378.15|ATP-binding cassette, sub-family D (ALD), member 1
mm39_v1_chr16_+_19959811_19959890	0.779957	AAGGCAC	ENSMUST00000090052.11|Yeats2|ENSMUSG00000041215.17|YEATS domain containing 2	ENSMUST00000115560.4|Yeats2|ENSMUSG00000041215.17|YEATS domain containing 2
mm39_v1_chr17_+_46513666_46513782	0.775735	AAGGCAC	ENSMUST00000087031.7|Xpo5|ENSMUSG00000067150.7|exportin 5
mm39_v1_chr7_-_101899294_101899331	0.769909	AAGGCAC	ENSMUST00000106923.2|Rhog|ENSMUSG00000073982.12|ras homolog family member G	ENSMUST00000098230.11|Rhog|ENSMUSG00000073982.12|ras homolog family member G
mm39_v1_chr17_+_73414977_73415075	0.768553	AAGGCAC	ENSMUST00000130574.4|Lclat1|ENSMUSG00000054469.15|lysocardiolipin acyltransferase 1	ENSMUST00000149064.9|Lclat1|ENSMUSG00000054469.15|lysocardiolipin acyltransferase 1	ENSMUST00000067545.8|Lclat1|ENSMUSG00000054469.15|lysocardiolipin acyltransferase 1
mm39_v1_chr2_+_119727689_119727786	0.762336	AAGGCAC	ENSMUST00000046717.13|Mga|ENSMUSG00000033943.16|MAX gene associated	ENSMUST00000079934.12|Mga|ENSMUSG00000033943.16|MAX gene associated	ENSMUST00000110774.8|Mga|ENSMUSG00000033943.16|MAX gene associated	ENSMUST00000110773.9|Mga|ENSMUSG00000033943.16|MAX gene associated	ENSMUST00000156510.2|Mga|ENSMUSG00000033943.16|MAX gene associated
mm39_v1_chr4_+_150366028_150366103	0.752492	AAGGCAC	ENSMUST00000105682.9|Rere|ENSMUSG00000039852.18|arginine glutamic acid dipeptide (RE) repeats
mm39_v1_chr8_+_88925821_88925852	0.741864	AAGGCAC	ENSMUST00000066748.10|Tent4b|ENSMUSG00000036779.13|terminal nucleotidyltransferase 4B	ENSMUST00000119033.8|Tent4b|ENSMUSG00000036779.13|terminal nucleotidyltransferase 4B	ENSMUST00000118952.8|Tent4b|ENSMUSG00000036779.13|terminal nucleotidyltransferase 4B
mm39_v1_chr7_-_98831916_98831935	0.740615	AAGGCAC	ENSMUST00000033001.6|Dgat2|ENSMUSG00000030747.6|diacylglycerol O-acyltransferase 2
mm39_v1_chr4_+_47353217_47353226	0.735735	AAGGCAC	ENSMUST00000007757.15|Tgfbr1|ENSMUSG00000007613.16|transforming growth factor, beta receptor I
mm39_v1_chr8_-_85414528_85414539	0.734846	AAGGCAC	ENSMUST00000001975.6|Nacc1|ENSMUSG00000001910.6|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
mm39_v1_chr3_+_32490300_32490300	0.734294	AAGGCAC	ENSMUST00000029201.14|Pik3ca|ENSMUSG00000027665.14|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
mm39_v1_chr4_+_149569717_149569764	0.732799	AAGGCAC	ENSMUST00000030842.8|Lzic|ENSMUSG00000028990.14|leucine zipper and CTNNBIP1 domain containing
mm39_v1_chr3_-_101511971_101512000	0.731507	AAGGCAC	ENSMUST00000036493.8|Atp1a1|ENSMUSG00000033161.11|ATPase, Na+/K+ transporting, alpha 1 polypeptide
mm39_v1_chr13_+_49495025_49495099	0.729949	AAGGCAC	ENSMUST00000048544.14|Bicd2|ENSMUSG00000037933.17|BICD cargo adaptor 2	ENSMUST00000110084.4|Bicd2|ENSMUSG00000037933.17|BICD cargo adaptor 2	ENSMUST00000110085.11|Bicd2|ENSMUSG00000037933.17|BICD cargo adaptor 2
mm39_v1_chr14_-_54855446_54855479	0.728826	AAGGCAC	ENSMUST00000227257.2|Psmb5|ENSMUSG00000022193.8|proteasome (prosome, macropain) subunit, beta type 5	ENSMUST00000022803.6|Psmb5|ENSMUSG00000022193.8|proteasome (prosome, macropain) subunit, beta type 5
mm39_v1_chr1_-_171854818_171854880	0.71996	AAGGCAC	ENSMUST00000138714.2|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2	ENSMUST00000027837.13|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2	ENSMUST00000111264.8|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2
mm39_v1_chr12_-_85224062_85224080	0.703898	AAGGCAC	ENSMUST00000004913.7|Pgf|ENSMUSG00000004791.8|placental growth factor
mm39_v1_chr19_-_42190589_42190691	0.703257	AAGGCAC	ENSMUST00000018966.8|Sfrp5|ENSMUSG00000018822.8|secreted frizzled-related sequence protein 5
mm39_v1_chr6_-_118456198_118456281	0.701013	AAGGCAC	ENSMUST00000161170.2|Zfp9|ENSMUSG00000072623.7|zinc finger protein 9
mm39_v1_chr9_+_65008735_65008817	0.697157	AAGGCAC	ENSMUST00000213533.2|Igdcc4|ENSMUSG00000032816.16|immunoglobulin superfamily, DCC subclass, member 4	ENSMUST00000035499.5|Igdcc4|ENSMUSG00000032816.16|immunoglobulin superfamily, DCC subclass, member 4	ENSMUST00000077696.13|Igdcc4|ENSMUSG00000032816.16|immunoglobulin superfamily, DCC subclass, member 4	ENSMUST00000166273.2|Igdcc4|ENSMUSG00000032816.16|immunoglobulin superfamily, DCC subclass, member 4
mm39_v1_chr18_-_35064906_35065066	0.695263	AAGGCAC	ENSMUST00000025218.8|Etf1|ENSMUSG00000024360.9|eukaryotic translation termination factor 1
mm39_v1_chr8_-_85620537_85620577	0.683045	AAGGCAC	ENSMUST00000003907.14|Gcdh|ENSMUSG00000003809.15|glutaryl-Coenzyme A dehydrogenase	ENSMUST00000109745.8|Gcdh|ENSMUSG00000003809.15|glutaryl-Coenzyme A dehydrogenase	ENSMUST00000142748.2|Gcdh|ENSMUSG00000003809.15|glutaryl-Coenzyme A dehydrogenase
mm39_v1_chr11_-_50321927_50321960	0.675612	AAGGCAC	ENSMUST00000020643.4|Rufy1|ENSMUSG00000020375.10|RUN and FYVE domain containing 1
mm39_v1_chr14_+_73379930_73380005	0.670583	AAGGCAC	ENSMUST00000170370.8|Rcbtb2|ENSMUSG00000022106.15|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2	ENSMUST00000164822.8|Rcbtb2|ENSMUSG00000022106.15|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2	ENSMUST00000165429.8|Rcbtb2|ENSMUSG00000022106.15|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm39_v1_chr16_-_38370535_38370620	0.668582	AAGGCAC	ENSMUST00000036210.7|Poglut1|ENSMUSG00000034064.15|protein O-glucosyltransferase 1
mm39_v1_chr4_-_41741278_41741359	0.668017	AAGGCAC	ENSMUST00000059354.15|Sigmar1|ENSMUSG00000036078.17|sigma non-opioid intracellular receptor 1	ENSMUST00000071561.7|Sigmar1|ENSMUSG00000036078.17|sigma non-opioid intracellular receptor 1
mm39_v1_chr12_-_104718159_104718211	0.663871	AAGGCAC	ENSMUST00000041987.7|Dicer1|ENSMUSG00000041415.11|dicer 1, ribonuclease type III
mm39_v1_chr9_-_43151179_43151208	0.663857	AAGGCAC	ENSMUST00000034512.7|Oaf|ENSMUSG00000032014.7|out at first homolog
mm39_v1_chr11_+_80191692_80191738	0.658408	AAGGCAC	ENSMUST00000017836.8|Rhbdl3|ENSMUSG00000017692.9|rhomboid like 3
mm39_v1_chr2_+_167774247_167774300	0.656934	AAGGCAC	ENSMUST00000029053.8|Ptpn1|ENSMUSG00000027540.14|protein tyrosine phosphatase, non-receptor type 1
mm39_v1_chr1_+_167177545_167177622	0.646477	AAGGCAC	ENSMUST00000028004.11|Aldh9a1|ENSMUSG00000026687.15|aldehyde dehydrogenase 9, subfamily A1
mm39_v1_chr12_+_4967376_4967438	0.645917	AAGGCAC	ENSMUST00000045664.7|Atad2b|ENSMUSG00000052812.6|ATPase family, AAA domain containing 2B
mm39_v1_chr9_-_58156982_58157078	0.63922	AAGGCAC	ENSMUST00000135310.8|Pml|ENSMUSG00000036986.17|promyelocytic leukemia	ENSMUST00000085673.11|Pml|ENSMUSG00000036986.17|promyelocytic leukemia	ENSMUST00000114136.9|Pml|ENSMUSG00000036986.17|promyelocytic leukemia	ENSMUST00000153820.8|Pml|ENSMUSG00000036986.17|promyelocytic leukemia	ENSMUST00000124982.2|Pml|ENSMUSG00000036986.17|promyelocytic leukemia
mm39_v1_chr17_+_30224003_30224074	0.637487	AAGGCAC	ENSMUST00000057897.10|Zfand3|ENSMUSG00000044477.13|zinc finger, AN1-type domain 3
mm39_v1_chr10_+_99099084_99099106	0.63626	AAGGCAC	ENSMUST00000020118.5|Dusp6|ENSMUSG00000019960.9|dual specificity phosphatase 6	ENSMUST00000220291.2|Dusp6|ENSMUSG00000019960.9|dual specificity phosphatase 6
mm39_v1_chr17_+_24851647_24851688	0.63061	AAGGCAC	ENSMUST00000047611.4|Nthl1|ENSMUSG00000041429.4|nth (endonuclease III)-like 1 (E.coli)
mm39_v1_chr11_+_98754434_98754472	0.627286	AAGGCAC	ENSMUST00000142414.8|Wipf2|ENSMUSG00000038013.15|WAS/WASL interacting protein family, member 2	ENSMUST00000037480.9|Wipf2|ENSMUSG00000038013.15|WAS/WASL interacting protein family, member 2
mm39_v1_chr8_+_46924074_46924146	0.617373	AAGGCAC	ENSMUST00000034046.13|Acsl1|ENSMUSG00000018796.14|acyl-CoA synthetase long-chain family member 1	ENSMUST00000211644.2|Acsl1|ENSMUSG00000018796.14|acyl-CoA synthetase long-chain family member 1
mm39_v1_chr3_-_41037427_41037481	0.617091	AAGGCAC	ENSMUST00000058578.8|Pgrmc2|ENSMUSG00000049940.8|progesterone receptor membrane component 2
mm39_v1_chr4_+_108477117_108477195	0.613263	AAGGCAC	ENSMUST00000030320.13|Cc2d1b|ENSMUSG00000028582.15|coiled-coil and C2 domain containing 1B
mm39_v1_chr18_+_57487800_57487869	0.591551	AAGGCAC	ENSMUST00000025490.10|Prrc1|ENSMUSG00000024594.10|proline-rich coiled-coil 1
mm39_v1_chr12_+_3476857_3476925	0.590308	AAGGCAC	ENSMUST00000111215.10|Asxl2|ENSMUSG00000037486.19|ASXL transcriptional regulator 2	ENSMUST00000092003.12|Asxl2|ENSMUSG00000037486.19|ASXL transcriptional regulator 2	ENSMUST00000144247.9|Asxl2|ENSMUSG00000037486.19|ASXL transcriptional regulator 2	ENSMUST00000153102.9|Asxl2|ENSMUSG00000037486.19|ASXL transcriptional regulator 2
mm39_v1_chr13_-_117162041_117162077	0.579239	AAGGCAC	ENSMUST00000022239.8|Parp8|ENSMUSG00000021725.10|poly (ADP-ribose) polymerase family, member 8
mm39_v1_chr8_-_120567236_120567288	0.57911	AAGGCAC	ENSMUST00000211873.2|Cotl1|ENSMUSG00000031827.14|coactosin-like 1 (Dictyostelium)	ENSMUST00000168698.2|Cotl1|ENSMUSG00000031827.14|coactosin-like 1 (Dictyostelium)	ENSMUST00000034285.14|Cotl1|ENSMUSG00000031827.14|coactosin-like 1 (Dictyostelium)
mm39_v1_chr17_-_63188139_63188352	0.576336	AAGGCAC	ENSMUST00000078839.5|Efna5|ENSMUSG00000048915.13|ephrin A5	ENSMUST00000076840.12|Efna5|ENSMUSG00000048915.13|ephrin A5
mm39_v1_chr13_-_21586858_21586925	0.575927	AAGGCAC	ENSMUST00000117721.8|Zkscan3|ENSMUSG00000021327.20|zinc finger with KRAB and SCAN domains 3	ENSMUST00000070785.16|Zkscan3|ENSMUSG00000021327.20|zinc finger with KRAB and SCAN domains 3	ENSMUST00000116433.2|Zkscan3|ENSMUSG00000021327.20|zinc finger with KRAB and SCAN domains 3	ENSMUST00000223831.2|Zkscan3|ENSMUSG00000021327.20|zinc finger with KRAB and SCAN domains 3	ENSMUST00000116434.11|Zkscan3|ENSMUSG00000021327.20|zinc finger with KRAB and SCAN domains 3	ENSMUST00000224820.2|Zkscan3|ENSMUSG00000021327.20|zinc finger with KRAB and SCAN domains 3
mm39_v1_chr17_+_87590308_87590381	0.560324	AAGGCAC	ENSMUST00000041110.12|Ttc7|ENSMUSG00000036918.17|tetratricopeptide repeat domain 7	ENSMUST00000125875.8|Ttc7|ENSMUSG00000036918.17|tetratricopeptide repeat domain 7
mm39_v1_chr8_-_86026385_86026431	0.553349	AAGGCAC	ENSMUST00000034131.10|Vps35|ENSMUSG00000031696.10|VPS35 retromer complex component
mm39_v1_chrX_+_73372664_73372682	0.547514	AAGGCAC	ENSMUST00000004326.4|Plxna3|ENSMUSG00000031398.14|plexin A3
mm39_v1_chr8_+_106331866_106331944	0.53935	AAGGCAC	ENSMUST00000043531.10|Ripor1|ENSMUSG00000038604.10|RHO family interacting cell polarization regulator 1
mm39_v1_chr1_-_151965876_151965918	0.533888	AAGGCAC	ENSMUST00000044581.14|1700025G04Rik|ENSMUSG00000032666.17|RIKEN cDNA 1700025G04 gene
mm39_v1_chr3_+_30656766_30656802	0.532027	AAGGCAC	ENSMUST00000047502.9|Mynn|ENSMUSG00000037730.14|myoneurin
mm39_v1_chr11_-_102298281_102298370	0.529434	AAGGCAC	ENSMUST00000107098.8|Slc25a39|ENSMUSG00000018677.10|solute carrier family 25, member 39	ENSMUST00000018821.9|Slc25a39|ENSMUSG00000018677.10|solute carrier family 25, member 39
mm39_v1_chr2_+_152135748_152135781	0.527015	AAGGCAC	ENSMUST00000028963.14|Tbc1d20|ENSMUSG00000027465.14|TBC1 domain family, member 20	ENSMUST00000144252.8|Tbc1d20|ENSMUSG00000027465.14|TBC1 domain family, member 20
mm39_v1_chr2_-_5900130_5900243	0.523923	AAGGCAC	ENSMUST00000026926.5|Sec61a2|ENSMUSG00000025816.16|Sec61, alpha subunit 2 (S. cerevisiae)	ENSMUST00000193792.6|Sec61a2|ENSMUSG00000025816.16|Sec61, alpha subunit 2 (S. cerevisiae)	ENSMUST00000102981.10|Sec61a2|ENSMUSG00000025816.16|Sec61, alpha subunit 2 (S. cerevisiae)
mm39_v1_chr11_+_72498029_72498133	0.512331	AAGGCAC	ENSMUST00000021148.13|Ube2g1|ENSMUSG00000020794.14|ubiquitin-conjugating enzyme E2G 1	ENSMUST00000138247.8|Ube2g1|ENSMUSG00000020794.14|ubiquitin-conjugating enzyme E2G 1
mm39_v1_chrX_-_101687813_101687865	0.510738	AAGGCAC	ENSMUST00000052012.14|Phka1|ENSMUSG00000034055.17|phosphorylase kinase alpha 1	ENSMUST00000043596.12|Phka1|ENSMUSG00000034055.17|phosphorylase kinase alpha 1	ENSMUST00000119229.8|Phka1|ENSMUSG00000034055.17|phosphorylase kinase alpha 1	ENSMUST00000122022.8|Phka1|ENSMUSG00000034055.17|phosphorylase kinase alpha 1	ENSMUST00000120270.8|Phka1|ENSMUSG00000034055.17|phosphorylase kinase alpha 1	ENSMUST00000113611.3|Phka1|ENSMUSG00000034055.17|phosphorylase kinase alpha 1
mm39_v1_chr2_+_124452493_124452534	0.501935	AAGGCAC	ENSMUST00000103239.10|Sema6d|ENSMUSG00000027200.18|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	ENSMUST00000103240.9|Sema6d|ENSMUSG00000027200.18|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm39_v1_chr19_-_44396092_44396173	0.498984	AAGGCAC	ENSMUST00000041331.4|Scd1|ENSMUSG00000037071.4|stearoyl-Coenzyme A desaturase 1
mm39_v1_chr13_-_12272962_12273020	0.498714	AAGGCAC	ENSMUST00000099856.6|Mtr|ENSMUSG00000021311.10|5-methyltetrahydrofolate-homocysteine methyltransferase
mm39_v1_chr12_-_51738666_51738738	0.497532	AAGGCAC	ENSMUST00000013130.15|Strn3|ENSMUSG00000020954.17|striatin, calmodulin binding protein 3	ENSMUST00000169503.4|Strn3|ENSMUSG00000020954.17|striatin, calmodulin binding protein 3
mm39_v1_chr11_+_72580823_72580841	0.495204	AAGGCAC	ENSMUST00000155998.2|Ankfy1|ENSMUSG00000020790.15|ankyrin repeat and FYVE domain containing 1
mm39_v1_chr8_+_124380639_124380668	0.490101	AAGGCAC	ENSMUST00000045487.4|Rhou|ENSMUSG00000039960.6|ras homolog family member U
mm39_v1_chr2_+_128907854_128907915	0.489998	AAGGCAC	ENSMUST00000035812.14|Ttl|ENSMUSG00000027394.14|tubulin tyrosine ligase
mm39_v1_chr3_-_19217174_19217249	0.48707	AAGGCAC	ENSMUST00000029125.10|Armc1|ENSMUSG00000027599.10|armadillo repeat containing 1
mm39_v1_chr17_-_27423438_27423450	0.483286	AAGGCAC	ENSMUST00000055117.9|Lemd2|ENSMUSG00000044857.9|LEM domain containing 2
mm39_v1_chr4_+_155778767_155778833	0.482564	AAGGCAC	ENSMUST00000099265.3|Fndc10|ENSMUSG00000074738.3|fibronectin type III domain containing 10
mm39_v1_chr6_-_51446752_51446834	0.481584	AAGGCAC	ENSMUST00000204188.3|Hnrnpa2b1|ENSMUSG00000004980.17|heterogeneous nuclear ribonucleoprotein A2/B1	ENSMUST00000203220.3|Hnrnpa2b1|ENSMUSG00000004980.17|heterogeneous nuclear ribonucleoprotein A2/B1	ENSMUST00000114459.8|Hnrnpa2b1|ENSMUSG00000004980.17|heterogeneous nuclear ribonucleoprotein A2/B1	ENSMUST00000090002.10|Hnrnpa2b1|ENSMUSG00000004980.17|heterogeneous nuclear ribonucleoprotein A2/B1
mm39_v1_chr5_-_75205358_75205435	0.478404	AAGGCAC	ENSMUST00000075452.7|Chic2|ENSMUSG00000029229.9|cysteine-rich hydrophobic domain 2
mm39_v1_chr2_+_15060051_15060222	0.47409	AAGGCAC	ENSMUST00000069870.11|Arl5b|ENSMUSG00000017418.15|ADP-ribosylation factor-like 5B	ENSMUST00000239125.2|Arl5b|ENSMUSG00000017418.15|ADP-ribosylation factor-like 5B	ENSMUST00000193836.3|Arl5b|ENSMUSG00000017418.15|ADP-ribosylation factor-like 5B
mm39_v1_chr11_-_86574586_86574673	0.473029	AAGGCAC	ENSMUST00000018315.10|Vmp1|ENSMUSG00000018171.10|vacuole membrane protein 1
mm39_v1_chr10_+_53473032_53473100	0.471547	AAGGCAC	ENSMUST00000020004.8|Asf1a|ENSMUSG00000019857.8|anti-silencing function 1A histone chaperone
mm39_v1_chr14_-_26390986_26391038	0.471394	AAGGCAC	ENSMUST00000052932.10|Pde12|ENSMUSG00000043702.10|phosphodiesterase 12
mm39_v1_chr10_+_98942898_98942995	0.470609	AAGGCAC	ENSMUST00000020113.15|Poc1b|ENSMUSG00000019952.16|POC1 centriolar protein B	ENSMUST00000159228.8|Poc1b|ENSMUSG00000019952.16|POC1 centriolar protein B	ENSMUST00000159990.2|Poc1b|ENSMUSG00000019952.16|POC1 centriolar protein B
mm39_v1_chr13_+_60749735_60749847	0.467556	AAGGCAC	ENSMUST00000226059.2|Dapk1|ENSMUSG00000021559.15|death associated protein kinase 1	ENSMUST00000077453.13|Dapk1|ENSMUSG00000021559.15|death associated protein kinase 1
mm39_v1_chr3_+_96939732_96939749	0.465886	AAGGCAC	ENSMUST00000132256.8|Gja5|ENSMUSG00000057123.15|gap junction protein, alpha 5	ENSMUST00000072600.7|Gja5|ENSMUSG00000057123.15|gap junction protein, alpha 5
mm39_v1_chr2_-_53081199_53081296	0.464721	AAGGCAC	ENSMUST00000239398.2|Prpf40a|ENSMUSG00000061136.17|pre-mRNA processing factor 40A	ENSMUST00000076313.14|Prpf40a|ENSMUSG00000061136.17|pre-mRNA processing factor 40A	ENSMUST00000210789.3|Prpf40a|ENSMUSG00000061136.17|pre-mRNA processing factor 40A
mm39_v1_chr2_+_14609063_14609117	0.46297	AAGGCAC	ENSMUST00000114723.9|Cacnb2|ENSMUSG00000057914.16|calcium channel, voltage-dependent, beta 2 subunit
mm39_v1_chr5_-_123887434_123887483	0.452025	AAGGCAC	ENSMUST00000182955.8|Rsrc2|ENSMUSG00000029422.16|arginine/serine-rich coiled-coil 2	ENSMUST00000182489.8|Rsrc2|ENSMUSG00000029422.16|arginine/serine-rich coiled-coil 2	ENSMUST00000183147.9|Rsrc2|ENSMUSG00000029422.16|arginine/serine-rich coiled-coil 2	ENSMUST00000050827.14|Rsrc2|ENSMUSG00000029422.16|arginine/serine-rich coiled-coil 2	ENSMUST00000057795.12|Rsrc2|ENSMUSG00000029422.16|arginine/serine-rich coiled-coil 2	ENSMUST00000111515.8|Rsrc2|ENSMUSG00000029422.16|arginine/serine-rich coiled-coil 2	ENSMUST00000182309.8|Rsrc2|ENSMUSG00000029422.16|arginine/serine-rich coiled-coil 2
mm39_v1_chr10_+_84938452_84938491	0.440402	AAGGCAC	ENSMUST00000095383.6|Tmem263|ENSMUSG00000060935.7|transmembrane protein 263
mm39_v1_chr7_-_37927399_37927440	0.43669	AAGGCAC	ENSMUST00000098513.6|Plekhf1|ENSMUSG00000074170.6|pleckstrin homology domain containing, family F (with FYVE domain) member 1
mm39_v1_chr4_-_156319232_156319332	0.430009	AAGGCAC	ENSMUST00000105569.5|Klhl17|ENSMUSG00002076083.1|kelch-like 17
mm39_v1_chr5_+_67125759_67125790	0.424273	AAGGCAC	ENSMUST00000238993.2|Limch1|ENSMUSG00000037736.21|LIM and calponin homology domains 1	ENSMUST00000038188.14|Limch1|ENSMUSG00000037736.21|LIM and calponin homology domains 1
mm39_v1_chr5_-_76452365_76452398	0.417021	AAGGCAC	ENSMUST00000075159.5|Clock|ENSMUSG00000029238.12|circadian locomotor output cycles kaput
mm39_v1_chr2_-_157046386_157046461	0.416855	AAGGCAC	ENSMUST00000029170.8|Rbl1|ENSMUSG00000027641.14|RB transcriptional corepressor like 1
mm39_v1_chr13_-_81859056_81859132	0.414433	AAGGCAC	ENSMUST00000161920.2|Polr3g|ENSMUSG00000035834.12|polymerase (RNA) III (DNA directed) polypeptide G	ENSMUST00000048993.12|Polr3g|ENSMUSG00000035834.12|polymerase (RNA) III (DNA directed) polypeptide G
mm39_v1_chr2_-_104324745_104324809	0.413078	AAGGCAC	ENSMUST00000028600.14|Hipk3|ENSMUSG00000027177.15|homeodomain interacting protein kinase 3
mm39_v1_chr2_+_152873772_152873939	0.411872	AAGGCAC	ENSMUST00000037235.7|Xkr7|ENSMUSG00000042631.8|X-linked Kx blood group related 7
mm39_v1_chr15_+_97682210_97682370	0.406556	AAGGCAC	ENSMUST00000117892.2|Slc48a1|ENSMUSG00000081534.4|solute carrier family 48 (heme transporter), member 1	ENSMUST00000229084.2|Slc48a1|ENSMUSG00000081534.4|solute carrier family 48 (heme transporter), member 1
mm39_v1_chr15_+_58805605_58805685	0.401372	AAGGCAC	ENSMUST00000022980.5|Ndufb9|ENSMUSG00000022354.5|NADH:ubiquinone oxidoreductase subunit B9
mm39_v1_chr15_+_34082805_34082882	0.401212	AAGGCAC	ENSMUST00000022865.17|Mtdh|ENSMUSG00000022255.17|metadherin
mm39_v1_chr9_+_56902172_56902207	0.40034	AAGGCAC	ENSMUST00000034832.8|Ptpn9|ENSMUSG00000032290.8|protein tyrosine phosphatase, non-receptor type 9
mm39_v1_chr5_-_88823989_88824045	0.399787	AAGGCAC	ENSMUST00000078945.12|Grsf1|ENSMUSG00000044221.15|G-rich RNA sequence binding factor 1
mm39_v1_chr14_-_58127698_58127777	0.398109	AAGGCAC	ENSMUST00000089473.5|Zdhhc20|ENSMUSG00000021969.9|zinc finger, DHHC domain containing 20
mm39_v1_chr11_+_69523754_69523832	0.397847	AAGGCAC	ENSMUST00000018909.4|Fxr2|ENSMUSG00000018765.6|fragile X mental retardation, autosomal homolog 2
mm39_v1_chr10_+_59715378_59715434	0.394599	AAGGCAC	ENSMUST00000147914.8|Dnajb12|ENSMUSG00000020109.14|DnaJ heat shock protein family (Hsp40) member B12	ENSMUST00000146590.8|Dnajb12|ENSMUSG00000020109.14|DnaJ heat shock protein family (Hsp40) member B12
mm39_v1_chr11_+_23615612_23615697	0.394246	AAGGCAC	ENSMUST00000109525.8|Pus10|ENSMUSG00000020280.13|pseudouridylate synthase 10	ENSMUST00000020520.11|Pus10|ENSMUSG00000020280.13|pseudouridylate synthase 10
mm39_v1_chr9_-_42175522_42175579	0.393496	AAGGCAC	ENSMUST00000217513.2|Sc5d|ENSMUSG00000032018.15|sterol-C5-desaturase	ENSMUST00000052725.15|Sc5d|ENSMUSG00000032018.15|sterol-C5-desaturase
mm39_v1_chr10_-_115220293_115220350	0.390492	AAGGCAC	ENSMUST00000020346.6|Thap2|ENSMUSG00000020137.6|THAP domain containing, apoptosis associated protein 2	ENSMUST00000218842.2|Thap2|ENSMUSG00000020137.6|THAP domain containing, apoptosis associated protein 2	ENSMUST00000218989.2|Thap2|ENSMUSG00000020137.6|THAP domain containing, apoptosis associated protein 2
mm39_v1_chr4_-_141450710_141450747	0.388545	AAGGCAC	ENSMUST00000102484.5|Ddi2|ENSMUSG00000078515.5|DNA-damage inducible protein 2	ENSMUST00000177592.2|Ddi2|ENSMUSG00000078515.5|DNA-damage inducible protein 2
mm39_v1_chrX_+_72818003_72818018	0.381541	AAGGCAC	ENSMUST00000002081.6|Srpk3|ENSMUSG00000002007.6|serine/arginine-rich protein specific kinase 3
mm39_v1_chr9_+_57444801_57444860	0.379518	AAGGCAC	ENSMUST00000093833.6|Fam219b|ENSMUSG00000032305.16|family with sequence similarity 219, member B	ENSMUST00000114200.10|Fam219b|ENSMUSG00000032305.16|family with sequence similarity 219, member B
mm39_v1_chr4_-_41713490_41713534	0.377691	AAGGCAC	ENSMUST00000038434.4|Rpp25l|ENSMUSG00000036114.4|ribonuclease P/MRP 25 subunit-like
mm39_v1_chr19_-_60215097_60215138	0.372442	AAGGCAC	ENSMUST00000238054.2|Fam204a|ENSMUSG00000057858.9|family with sequence similarity 204, member A	ENSMUST00000065286.2|Fam204a|ENSMUSG00000057858.9|family with sequence similarity 204, member A
mm39_v1_chr13_+_15638466_15638565	0.370802	AAGGCAC	ENSMUST00000110510.4|Gli3|ENSMUSG00000021318.16|GLI-Kruppel family member GLI3
mm39_v1_chr10_+_62816005_62816041	0.369285	AAGGCAC	ENSMUST00000131718.8|Rufy2|ENSMUSG00000020070.19|RUN and FYVE domain-containing 2	ENSMUST00000119567.8|Rufy2|ENSMUSG00000020070.19|RUN and FYVE domain-containing 2	ENSMUST00000122231.8|Rufy2|ENSMUSG00000020070.19|RUN and FYVE domain-containing 2
mm39_v1_chr4_-_62278673_62278749	0.367029	AAGGCAC	ENSMUST00000084527.10|Fkbp15|ENSMUSG00000066151.13|FK506 binding protein 15	ENSMUST00000098033.10|Fkbp15|ENSMUSG00000066151.13|FK506 binding protein 15
mm39_v1_chr7_+_35285657_35285715	0.357834	AAGGCAC	ENSMUST00000040844.16|Ankrd27|ENSMUSG00000034867.17|ankyrin repeat domain 27 (VPS9 domain)	ENSMUST00000188906.7|Ankrd27|ENSMUSG00000034867.17|ankyrin repeat domain 27 (VPS9 domain)	ENSMUST00000186245.7|Ankrd27|ENSMUSG00000034867.17|ankyrin repeat domain 27 (VPS9 domain)	ENSMUST00000190503.7|Ankrd27|ENSMUSG00000034867.17|ankyrin repeat domain 27 (VPS9 domain)
mm39_v1_chr5_+_142615292_142615348	0.354255	AAGGCAC	ENSMUST00000036872.16|Wipi2|ENSMUSG00000029578.16|WD repeat domain, phosphoinositide interacting 2	ENSMUST00000110778.2|Wipi2|ENSMUSG00000029578.16|WD repeat domain, phosphoinositide interacting 2
mm39_v1_chr6_-_120015608_120015660	0.352606	AAGGCAC	ENSMUST00000177761.8|Wnk1|ENSMUSG00000045962.17|WNK lysine deficient protein kinase 1	ENSMUST00000088644.13|Wnk1|ENSMUSG00000045962.17|WNK lysine deficient protein kinase 1	ENSMUST00000060043.13|Wnk1|ENSMUSG00000045962.17|WNK lysine deficient protein kinase 1
mm39_v1_chr3_+_129672205_129672355	0.345822	AAGGCAC	ENSMUST00000029629.15|Pla2g12a|ENSMUSG00000027999.16|phospholipase A2, group XIIA
mm39_v1_chr2_-_34645241_34645268	0.344534	AAGGCAC	ENSMUST00000102800.9|Gapvd1|ENSMUSG00000026867.20|GTPase activating protein and VPS9 domains 1
mm39_v1_chr11_+_80074677_80074709	0.343277	AAGGCAC	ENSMUST00000017839.3|Rnf135|ENSMUSG00000020707.7|ring finger protein 135
mm39_v1_chr2_+_112209548_112209598	0.338074	AAGGCAC	ENSMUST00000028552.4|Katnbl1|ENSMUSG00000027132.4|katanin p80 subunit B like 1
mm39_v1_chr16_-_11021116_11021195	0.336841	AAGGCAC	ENSMUST00000230002.2|Rsl1d1|ENSMUSG00000005846.13|ribosomal L1 domain containing 1	ENSMUST00000119953.2|Rsl1d1|ENSMUSG00000005846.13|ribosomal L1 domain containing 1
mm39_v1_chr13_-_97274430_97274450	0.336142	AAGGCAC	ENSMUST00000073456.9|Nsa2|ENSMUSG00000060739.9|NSA2 ribosome biogenesis homolog
mm39_v1_chr7_-_110443557_110443664	0.332171	AAGGCAC	ENSMUST00000177462.8|Rnf141|ENSMUSG00000030788.17|ring finger protein 141	ENSMUST00000176716.3|Rnf141|ENSMUSG00000030788.17|ring finger protein 141	ENSMUST00000176746.8|Rnf141|ENSMUSG00000030788.17|ring finger protein 141	ENSMUST00000177236.8|Rnf141|ENSMUSG00000030788.17|ring finger protein 141
mm39_v1_chr5_-_138153956_138154006	0.331006	AAGGCAC	ENSMUST00000132318.2|Zfp113|ENSMUSG00000037007.18|zinc finger protein 113	ENSMUST00000049393.15|Zfp113|ENSMUSG00000037007.18|zinc finger protein 113
mm39_v1_chr9_+_21336198_21336272	0.321686	AAGGCAC	ENSMUST00000165766.9|Dnm2|ENSMUSG00000033335.18|dynamin 2	ENSMUST00000173397.8|Dnm2|ENSMUSG00000033335.18|dynamin 2	ENSMUST00000072362.14|Dnm2|ENSMUSG00000033335.18|dynamin 2	ENSMUST00000091087.13|Dnm2|ENSMUSG00000033335.18|dynamin 2	ENSMUST00000115404.11|Dnm2|ENSMUSG00000033335.18|dynamin 2
mm39_v1_chr10_+_61531282_61531355	0.315973	AAGGCAC	ENSMUST00000020284.5|Tysnd1|ENSMUSG00000020087.6|trypsin domain containing 1
mm39_v1_chrX_-_73129195_73129296	0.315199	AAGGCAC	ENSMUST00000140399.3|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000123362.8|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000100750.10|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000033770.13|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2
mm39_v1_chr4_+_32982981_32983155	0.31306	AAGGCAC	ENSMUST00000098190.10|Rragd|ENSMUSG00000028278.15|Ras-related GTP binding D	ENSMUST00000029946.14|Rragd|ENSMUSG00000028278.15|Ras-related GTP binding D
mm39_v1_chr2_+_26899935_26900094	0.312982	AAGGCAC	ENSMUST00000114005.9|Cacfd1|ENSMUSG00000015488.15|calcium channel flower domain containing 1	ENSMUST00000114004.8|Cacfd1|ENSMUSG00000015488.15|calcium channel flower domain containing 1	ENSMUST00000114006.8|Cacfd1|ENSMUSG00000015488.15|calcium channel flower domain containing 1	ENSMUST00000114007.8|Cacfd1|ENSMUSG00000015488.15|calcium channel flower domain containing 1	ENSMUST00000133807.2|Cacfd1|ENSMUSG00000015488.15|calcium channel flower domain containing 1
mm39_v1_chr14_+_31216305_31216356	0.312234	AAGGCAC	ENSMUST00000022446.7|Eaf1|ENSMUSG00000021890.7|ELL associated factor 1
mm39_v1_chr5_+_147367237_147367355	0.309587	AAGGCAC	ENSMUST00000176600.8|Pan3|ENSMUSG00000029647.16|PAN3 poly(A) specific ribonuclease subunit
mm39_v1_chr10_+_81104006_81104039	0.306185	AAGGCAC	ENSMUST00000057798.9|Apba3|ENSMUSG00000004931.12|amyloid beta (A4) precursor protein-binding, family A, member 3	ENSMUST00000219304.2|Apba3|ENSMUSG00000004931.12|amyloid beta (A4) precursor protein-binding, family A, member 3
mm39_v1_chr8_-_25691380_25691465	0.304646	AAGGCAC	ENSMUST00000084512.11|Tacc1|ENSMUSG00000065954.12|transforming, acidic coiled-coil containing protein 1
mm39_v1_chr12_-_98225676_98225718	0.304241	AAGGCAC	ENSMUST00000021390.9|Galc|ENSMUSG00000021003.11|galactosylceramidase
mm39_v1_chr14_-_65187287_65187335	0.303402	AAGGCAC	ENSMUST00000067843.10|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1	ENSMUST00000176489.8|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1	ENSMUST00000175905.8|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1	ENSMUST00000022544.14|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1	ENSMUST00000175744.8|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1	ENSMUST00000176128.8|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1
mm39_v1_chr17_+_3165232_3165257	0.303182	AAGGCAC	ENSMUST00000076734.8|Scaf8|ENSMUSG00000046201.10|SR-related CTD-associated factor 8
mm39_v1_chr5_+_140404997_140405127	0.300997	AAGGCAC	ENSMUST00000100507.8|Eif3b|ENSMUSG00000056076.14|eukaryotic translation initiation factor 3, subunit B
mm39_v1_chr2_-_30305779_30305825	0.30026	AAGGCAC	ENSMUST00000102855.8|Crat|ENSMUSG00000026853.16|carnitine acetyltransferase	ENSMUST00000028207.13|Crat|ENSMUSG00000026853.16|carnitine acetyltransferase
mm39_v1_chr6_+_120813199_120813218	0.29911	AAGGCAC	ENSMUST00000009256.4|Bcl2l13|ENSMUSG00000009112.5|BCL2-like 13 (apoptosis facilitator)
mm39_v1_chr9_-_59393893_59393919	0.297329	AAGGCAC	ENSMUST00000171975.8|Arih1|ENSMUSG00000025234.12|ariadne RBR E3 ubiquitin protein ligase 1
mm39_v1_chr9_-_50920236_50920380	0.297079	AAGGCAC	ENSMUST00000176824.8|Sik2|ENSMUSG00000037112.17|salt inducible kinase 2	ENSMUST00000176663.8|Sik2|ENSMUSG00000037112.17|salt inducible kinase 2	ENSMUST00000041375.11|Sik2|ENSMUSG00000037112.17|salt inducible kinase 2
mm39_v1_chr11_-_97078698_97078752	0.295951	AAGGCAC	ENSMUST00000001479.5|Kpnb1|ENSMUSG00000001440.6|karyopherin (importin) beta 1
mm39_v1_chr8_+_18896267_18896344	0.288146	AAGGCAC	ENSMUST00000149565.8|Agpat5|ENSMUSG00000031467.11|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)	ENSMUST00000033847.5|Agpat5|ENSMUSG00000031467.11|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)
mm39_v1_chr11_-_95896721_95896778	0.286367	AAGGCAC	ENSMUST00000013559.3|Igf2bp1|ENSMUSG00000013415.10|insulin-like growth factor 2 mRNA binding protein 1
mm39_v1_chr4_+_101276474_101276547	0.277506	AAGGCAC	ENSMUST00000102780.8|Ak4|ENSMUSG00000028527.19|adenylate kinase 4	ENSMUST00000106946.8|Ak4|ENSMUSG00000028527.19|adenylate kinase 4	ENSMUST00000106945.8|Ak4|ENSMUSG00000028527.19|adenylate kinase 4
mm39_v1_chr13_-_100787481_100787592	0.275208	AAGGCAC	ENSMUST00000177848.3|Rad17|ENSMUSG00000021635.15|RAD17 checkpoint clamp loader component	ENSMUST00000022136.14|Rad17|ENSMUSG00000021635.15|RAD17 checkpoint clamp loader component
mm39_v1_chr7_+_51160754_51160794	0.272108	AAGGCAC	ENSMUST00000043944.6|Ano5|ENSMUSG00000055489.9|anoctamin 5	ENSMUST00000207044.2|Ano5|ENSMUSG00000055489.9|anoctamin 5
mm39_v1_chr13_+_38010203_38010291	0.268766	AAGGCAC	ENSMUST00000128570.9|Rreb1|ENSMUSG00000039087.18|ras responsive element binding protein 1
mm39_v1_chr6_+_136495784_136495808	0.26795	AAGGCAC	ENSMUST00000032335.13|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein	ENSMUST00000185724.7|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein
mm39_v1_chr6_+_38528269_38528428	0.266476	AAGGCAC	ENSMUST00000163047.8|Luc7l2|ENSMUSG00000029823.17|LUC7-like 2 (S. cerevisiae)	ENSMUST00000161538.8|Luc7l2|ENSMUSG00000029823.17|LUC7-like 2 (S. cerevisiae)	ENSMUST00000057692.11|Luc7l2|ENSMUSG00000029823.17|LUC7-like 2 (S. cerevisiae)
mm39_v1_chr3_-_94922525_94922572	0.262508	AAGGCAC	ENSMUST00000128438.2|Zfp687|ENSMUSG00000019338.14|zinc finger protein 687	ENSMUST00000149747.2|Zfp687|ENSMUSG00000019338.14|zinc finger protein 687	ENSMUST00000019482.8|Zfp687|ENSMUSG00000019338.14|zinc finger protein 687
mm39_v1_chr7_+_58878490_58878518	0.256729	AAGGCAC	ENSMUST00000202945.4|Ube3a|ENSMUSG00000025326.13|ubiquitin protein ligase E3A	ENSMUST00000107537.5|Ube3a|ENSMUSG00000025326.13|ubiquitin protein ligase E3A
mm39_v1_chr19_-_60569323_60569468	0.253989	AAGGCAC	ENSMUST00000111460.5|Cacul1|ENSMUSG00000033417.17|CDK2 associated, cullin domain 1	ENSMUST00000166712.9|Cacul1|ENSMUSG00000033417.17|CDK2 associated, cullin domain 1	ENSMUST00000081790.15|Cacul1|ENSMUSG00000033417.17|CDK2 associated, cullin domain 1
mm39_v1_chr8_-_32408864_32408913	0.252269	AAGGCAC	ENSMUST00000073884.7|Nrg1|ENSMUSG00000062991.10|neuregulin 1	ENSMUST00000238812.2|Nrg1|ENSMUSG00000062991.10|neuregulin 1
mm39_v1_chr11_+_117090465_117090518	0.251926	AAGGCAC	ENSMUST00000093907.11|Septin9|ENSMUSG00000059248.14|septin 9
mm39_v1_chr11_+_77576981_77577005	0.239359	AAGGCAC	ENSMUST00000100802.11|Nufip2|ENSMUSG00000037857.17|nuclear fragile X mental retardation protein interacting protein 2	ENSMUST00000181023.2|Nufip2|ENSMUSG00000037857.17|nuclear fragile X mental retardation protein interacting protein 2
mm39_v1_chr2_+_12928852_12928924	0.237366	AAGGCAC	ENSMUST00000154269.7|Pter|ENSMUSG00000026730.13|phosphotriesterase related	ENSMUST00000114796.9|Pter|ENSMUSG00000026730.13|phosphotriesterase related	ENSMUST00000134794.8|Pter|ENSMUSG00000026730.13|phosphotriesterase related	ENSMUST00000028063.7|Pter|ENSMUSG00000026730.13|phosphotriesterase related
mm39_v1_chr11_+_50022167_50022253	0.228948	AAGGCAC	ENSMUST00000093138.13|Tbc1d9b|ENSMUSG00000036644.16|TBC1 domain family, member 9B	ENSMUST00000101270.5|Tbc1d9b|ENSMUSG00000036644.16|TBC1 domain family, member 9B
mm39_v1_chr11_+_109253598_109253695	0.214618	AAGGCAC	ENSMUST00000106702.4|Gna13|ENSMUSG00000020611.15|guanine nucleotide binding protein, alpha 13	ENSMUST00000020930.14|Gna13|ENSMUSG00000020611.15|guanine nucleotide binding protein, alpha 13
mm39_v1_chr2_-_32584132_32584197	0.211371	AAGGCAC	ENSMUST00000028148.11|Fpgs|ENSMUSG00000009566.13|folylpolyglutamyl synthetase
mm39_v1_chr13_+_96679233_96679283	0.205678	AAGGCAC	ENSMUST00000077672.12|Cert1|ENSMUSG00000021669.16|ceramide transporter 1	ENSMUST00000109444.3|Cert1|ENSMUSG00000021669.16|ceramide transporter 1
mm39_v1_chr10_-_116984386_116984452	0.202639	AAGGCAC	ENSMUST00000020381.5|Frs2|ENSMUSG00000020170.5|fibroblast growth factor receptor substrate 2
mm39_v1_chr11_+_115272732_115272759	0.201649	AAGGCAC	ENSMUST00000053288.6|Cdr2l|ENSMUSG00000050910.6|cerebellar degeneration-related protein 2-like
mm39_v1_chr16_+_17269845_17269903	0.201018	AAGGCAC	ENSMUST00000006293.5|Crkl|ENSMUSG00000006134.5|v-crk avian sarcoma virus CT10 oncogene homolog-like	ENSMUST00000231228.2|Crkl|ENSMUSG00000006134.5|v-crk avian sarcoma virus CT10 oncogene homolog-like
mm39_v1_chr4_+_139302009_139302036	0.185293	AAGGCAC	ENSMUST00000174078.2|Iffo2|ENSMUSG00000041025.16|intermediate filament family orphan 2
mm39_v1_chr6_-_83418656_83418666	0.180179	AAGGCAC	ENSMUST00000089622.11|Tet3|ENSMUSG00000034832.16|tet methylcytosine dioxygenase 3
mm39_v1_chr19_+_44551280_44551318	0.178569	AAGGCAC	ENSMUST00000040455.5|Hif1an|ENSMUSG00000036450.5|hypoxia-inducible factor 1, alpha subunit inhibitor
mm39_v1_chr10_-_93725619_93725688	0.178258	AAGGCAC	ENSMUST00000181091.8|Metap2|ENSMUSG00000036112.16|methionine aminopeptidase 2	ENSMUST00000181217.8|Metap2|ENSMUSG00000036112.16|methionine aminopeptidase 2	ENSMUST00000047910.15|Metap2|ENSMUSG00000036112.16|methionine aminopeptidase 2	ENSMUST00000180688.2|Metap2|ENSMUSG00000036112.16|methionine aminopeptidase 2
mm39_v1_chr14_-_76024471_76024482	0.173439	AAGGCAC	ENSMUST00000022580.8|Slc25a30|ENSMUSG00000022003.8|solute carrier family 25, member 30
mm39_v1_chr16_-_17745999_17746083	0.172706	AAGGCAC	ENSMUST00000003622.16|Slc25a1|ENSMUSG00000003528.16|solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1
mm39_v1_chr3_+_51323383_51323465	0.172291	AAGGCAC	ENSMUST00000029303.13|Naa15|ENSMUSG00000063273.12|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm39_v1_chr19_-_44095840_44095941	0.165596	AAGGCAC	ENSMUST00000119591.2|Chuk|ENSMUSG00000025199.17|conserved helix-loop-helix ubiquitous kinase	ENSMUST00000026217.11|Chuk|ENSMUSG00000025199.17|conserved helix-loop-helix ubiquitous kinase
mm39_v1_chr11_+_60913386_60913397	0.164355	AAGGCAC	ENSMUST00000089184.11|Kcnj12|ENSMUSG00000042529.15|potassium inwardly-rectifying channel, subfamily J, member 12
mm39_v1_chr3_-_143910926_143910981	0.164006	AAGGCAC	ENSMUST00000120539.8|Lmo4|ENSMUSG00000028266.18|LIM domain only 4	ENSMUST00000196264.5|Lmo4|ENSMUSG00000028266.18|LIM domain only 4
mm39_v1_chr6_+_86381201_86381222	0.16376	AAGGCAC	ENSMUST00000095754.10|Tia1|ENSMUSG00000071337.12|cytotoxic granule-associated RNA binding protein 1	ENSMUST00000095753.9|Tia1|ENSMUSG00000071337.12|cytotoxic granule-associated RNA binding protein 1
mm39_v1_chr15_+_44291470_44291554	0.163143	AAGGCAC	ENSMUST00000226827.2|Eny2|ENSMUSG00000022338.9|ENY2 transcription and export complex 2 subunit	ENSMUST00000060652.5|Eny2|ENSMUSG00000022338.9|ENY2 transcription and export complex 2 subunit
mm39_v1_chr1_-_155617773_155617790	0.158466	AAGGCAC	ENSMUST00000027740.14|Lhx4|ENSMUSG00000026468.15|LIM homeobox protein 4
mm39_v1_chr14_+_31881822_31881950	0.148344	AAGGCAC	ENSMUST00000163336.8|Ncoa4|ENSMUSG00000056234.16|nuclear receptor coactivator 4	ENSMUST00000169722.8|Ncoa4|ENSMUSG00000056234.16|nuclear receptor coactivator 4	ENSMUST00000168385.8|Ncoa4|ENSMUSG00000056234.16|nuclear receptor coactivator 4
mm39_v1_chr2_-_152239966_152239997	0.146927	AAGGCAC	ENSMUST00000063332.9|Sox12|ENSMUSG00000051817.9|SRY (sex determining region Y)-box 12	ENSMUST00000182625.2|Sox12|ENSMUSG00000051817.9|SRY (sex determining region Y)-box 12
mm39_v1_chr4_+_100926170_100926185	0.143679	AAGGCAC	ENSMUST00000106955.2|Raver2|ENSMUSG00000035275.15|ribonucleoprotein, PTB-binding 2	ENSMUST00000038463.15|Raver2|ENSMUSG00000035275.15|ribonucleoprotein, PTB-binding 2
mm39_v1_chr13_+_69760346_69760379	0.138581	AAGGCAC	ENSMUST00000022087.7|Nsun2|ENSMUSG00000021595.19|NOL1/NOP2/Sun domain family member 2
mm39_v1_chr14_-_65335479_65335555	0.136853	AAGGCAC	ENSMUST00000225633.2|Extl3|ENSMUSG00000021978.10|exostosin-like glycosyltransferase 3	ENSMUST00000022550.8|Extl3|ENSMUSG00000021978.10|exostosin-like glycosyltransferase 3
mm39_v1_chr2_-_126517458_126517512	0.135597	AAGGCAC	ENSMUST00000103227.8|Gabpb1|ENSMUSG00000027361.16|GA repeat binding protein, beta 1	ENSMUST00000110425.9|Gabpb1|ENSMUSG00000027361.16|GA repeat binding protein, beta 1	ENSMUST00000089745.11|Gabpb1|ENSMUSG00000027361.16|GA repeat binding protein, beta 1
mm39_v1_chr10_-_110845860_110845927	0.13047	AAGGCAC	ENSMUST00000041723.15|Zdhhc17|ENSMUSG00000035798.15|zinc finger, DHHC domain containing 17
mm39_v1_chr2_-_154249997_154250034	0.125885	AAGGCAC	ENSMUST00000028991.7|Snta1|ENSMUSG00000027488.13|syntrophin, acidic 1	ENSMUST00000109728.8|Snta1|ENSMUSG00000027488.13|syntrophin, acidic 1
mm39_v1_chr3_-_69034425_69034446	0.123845	AAGGCAC	ENSMUST00000194558.6|Kpna4|ENSMUSG00000027782.11|karyopherin (importin) alpha 4	ENSMUST00000029353.9|Kpna4|ENSMUSG00000027782.11|karyopherin (importin) alpha 4
mm39_v1_chr7_+_44498640_44498720	0.114387	AAGGCAC	ENSMUST00000054343.15|Akt1s1|ENSMUSG00000011096.18|AKT1 substrate 1 (proline-rich)	ENSMUST00000142880.3|Akt1s1|ENSMUSG00000011096.18|AKT1 substrate 1 (proline-rich)
mm39_v1_chr8_-_96534085_96534099	0.113062	AAGGCAC	ENSMUST00000098473.11|Cnot1|ENSMUSG00000036550.17|CCR4-NOT transcription complex, subunit 1	ENSMUST00000211887.2|Cnot1|ENSMUSG00000036550.17|CCR4-NOT transcription complex, subunit 1
mm39_v1_chr2_+_118731860_118731969	0.108059	AAGGCAC	ENSMUST00000036578.7|Bahd1|ENSMUSG00000040007.9|bromo adjacent homology domain containing 1
mm39_v1_chr12_-_91556761_91556783	0.105577	AAGGCAC	ENSMUST00000021345.14|Gtf2a1|ENSMUSG00000020962.15|general transcription factor II A, 1
mm39_v1_chr1_-_165830160_165830182	0.102218	AAGGCAC	ENSMUST00000111429.11|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000176800.2|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000177358.8|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1
mm39_v1_chr16_+_37688744_37688844	0.101452	AAGGCAC	ENSMUST00000078717.7|Lrrc58|ENSMUSG00000034158.10|leucine rich repeat containing 58
mm39_v1_chr4_-_134014525_134014575	0.0984055	AAGGCAC	ENSMUST00000145006.8|Pdik1l|ENSMUSG00000050890.16|PDLIM1 interacting kinase 1 like	ENSMUST00000105877.9|Pdik1l|ENSMUSG00000050890.16|PDLIM1 interacting kinase 1 like	ENSMUST00000127857.2|Pdik1l|ENSMUSG00000050890.16|PDLIM1 interacting kinase 1 like	ENSMUST00000105876.9|Pdik1l|ENSMUSG00000050890.16|PDLIM1 interacting kinase 1 like
mm39_v1_chr1_+_166828982_166828999	0.0968887	AAGGCAC	ENSMUST00000165874.8|Fam78b|ENSMUSG00000060568.15|family with sequence similarity 78, member B	ENSMUST00000190081.7|Fam78b|ENSMUSG00000060568.15|family with sequence similarity 78, member B
mm39_v1_chr9_+_45749869_45749892	0.0958947	AAGGCAC	ENSMUST00000078111.11|Bace1|ENSMUSG00000032086.13|beta-site APP cleaving enzyme 1	ENSMUST00000034591.11|Bace1|ENSMUSG00000032086.13|beta-site APP cleaving enzyme 1
mm39_v1_chrX_+_52001108_52001238	0.0850722	AAGGCAC	ENSMUST00000078944.13|Phf6|ENSMUSG00000025626.17|PHD finger protein 6	ENSMUST00000101587.10|Phf6|ENSMUSG00000025626.17|PHD finger protein 6	ENSMUST00000154864.4|Phf6|ENSMUSG00000025626.17|PHD finger protein 6
mm39_v1_chr14_+_120715855_120715923	0.0839893	AAGGCAC	ENSMUST00000062117.14|Rap2a|ENSMUSG00000051615.15|RAS related protein 2a
mm39_v1_chr7_-_81356653_81356711	0.0772728	AAGGCAC	ENSMUST00000026922.15|Homer2|ENSMUSG00000025813.15|homer scaffolding protein 2
mm39_v1_chr4_-_132649798_132649874	0.0769511	AAGGCAC	ENSMUST00000097856.10|Fam76a|ENSMUSG00000028878.12|family with sequence similarity 76, member A	ENSMUST00000030696.11|Fam76a|ENSMUSG00000028878.12|family with sequence similarity 76, member A
mm39_v1_chr1_+_138891447_138891539	0.0725044	AAGGCAC	ENSMUST00000168527.8|Dennd1b|ENSMUSG00000056268.16|DENN/MADD domain containing 1B
mm39_v1_chr2_-_84508385_84508462	0.0642285	AAGGCAC	ENSMUST00000189772.2|Gm28635|ENSMUSG00000101645.2|predicted gene 28635	ENSMUST00000053664.9|Tmx2|ENSMUSG00000050043.17|thioredoxin-related transmembrane protein 2	ENSMUST00000111664.8|Tmx2|ENSMUSG00000050043.17|thioredoxin-related transmembrane protein 2
mm39_v1_chr16_+_58490625_58490726	0.0611692	AAGGCAC	ENSMUST00000060077.7|Cpox|ENSMUSG00000022742.7|coproporphyrinogen oxidase
mm39_v1_chr16_+_32427738_32427763	0.0608569	AAGGCAC	ENSMUST00000023486.15|Tfrc|ENSMUSG00000022797.17|transferrin receptor
mm39_v1_chr6_-_59403264_59403330	0.0595452	AAGGCAC	ENSMUST00000051065.6|Gprin3|ENSMUSG00000045441.6|GPRIN family member 3
mm39_v1_chr11_-_73089837_73089882	0.0579476	AAGGCAC	ENSMUST00000006103.9|Ctns|ENSMUSG00000005949.10|cystinosis, nephropathic	ENSMUST00000108476.8|Ctns|ENSMUSG00000005949.10|cystinosis, nephropathic
mm39_v1_chr2_+_52747855_52747880	0.0529626	AAGGCAC	ENSMUST00000155586.9|Fmnl2|ENSMUSG00000036053.18|formin-like 2	ENSMUST00000090952.11|Fmnl2|ENSMUSG00000036053.18|formin-like 2	ENSMUST00000127122.9|Fmnl2|ENSMUSG00000036053.18|formin-like 2	ENSMUST00000049483.14|Fmnl2|ENSMUSG00000036053.18|formin-like 2	ENSMUST00000050719.13|Fmnl2|ENSMUSG00000036053.18|formin-like 2
mm39_v1_chr5_+_129970882_129970968	0.047147	AAGGCAC	ENSMUST00000201855.2|Vkorc1l1|ENSMUSG00000066735.9|vitamin K epoxide reductase complex, subunit 1-like 1	ENSMUST00000073945.6|Vkorc1l1|ENSMUSG00000066735.9|vitamin K epoxide reductase complex, subunit 1-like 1
mm39_v1_chr17_+_28361115_28361167	0.0324308	AAGGCAC	ENSMUST00000043503.11|Scube3|ENSMUSG00000038677.15|signal peptide, CUB domain, EGF-like 3
mm39_v1_chr9_+_62585108_62585125	0.0122081	AAGGCAC	ENSMUST00000034774.9|Itga11|ENSMUSG00000032243.9|integrin alpha 11
mm39_v1_chr1_-_189902868_189902942	0.0077035	AAGGCAC	ENSMUST00000177288.4|Prox1|ENSMUSG00000010175.14|prospero homeobox 1	ENSMUST00000175916.8|Prox1|ENSMUSG00000010175.14|prospero homeobox 1
mm39_v1_chr2_-_155953874_155953898	0.00442935	AAGGCAC	ENSMUST00000059647.12|Rbm12|ENSMUSG00000089824.11|RNA binding motif protein 12	ENSMUST00000109604.9|Rbm12|ENSMUSG00000089824.11|RNA binding motif protein 12	ENSMUST00000142960.9|Cpne1|ENSMUSG00000074643.13|copine I	ENSMUST00000138068.2|Rbm12|ENSMUSG00000089824.11|RNA binding motif protein 12	ENSMUST00000136296.9|Cpne1|ENSMUSG00000074643.13|copine I	ENSMUST00000128499.2|Rbm12|ENSMUSG00000089824.11|RNA binding motif protein 12
mm39_v1_chr7_+_24602337_24602510	0.0041275	AAGGCAC	ENSMUST00000117796.8|Arhgef1|ENSMUSG00000040940.19|Rho guanine nucleotide exchange factor (GEF) 1	ENSMUST00000047873.16|Arhgef1|ENSMUSG00000040940.19|Rho guanine nucleotide exchange factor (GEF) 1	ENSMUST00000098683.11|Arhgef1|ENSMUSG00000040940.19|Rho guanine nucleotide exchange factor (GEF) 1	ENSMUST00000206508.2|Arhgef1|ENSMUSG00000040940.19|Rho guanine nucleotide exchange factor (GEF) 1	ENSMUST00000206028.2|Arhgef1|ENSMUSG00000040940.19|Rho guanine nucleotide exchange factor (GEF) 1
