mm39_v1_chr2_-_103133524_103133623	4.63373	AAUGCCC	ENSMUST00000090475.10|Ehf|ENSMUSG00000012350.16|ets homologous factor
mm39_v1_chr16_+_34605282_34605305	3.9442	AAUGCCC	ENSMUST00000023538.9|Mylk|ENSMUSG00000022836.12|myosin, light polypeptide kinase
mm39_v1_chr5_+_64960705_64960731	3.51183	AAUGCCC	ENSMUST00000165536.8|Klf3|ENSMUSG00000029178.15|Kruppel-like factor 3 (basic)
mm39_v1_chr1_-_64776890_64776915	3.03474	AAUGCCC	ENSMUST00000116133.4|Fzd5|ENSMUSG00000045005.10|frizzled class receptor 5	ENSMUST00000063982.7|Fzd5|ENSMUSG00000045005.10|frizzled class receptor 5
mm39_v1_chr13_+_81031512_81031543	2.77745	AAUGCCC	ENSMUST00000099356.10|Arrdc3|ENSMUSG00000074794.11|arrestin domain containing 3
mm39_v1_chr1_-_13660027_13660134	2.74071	AAUGCCC	ENSMUST00000027068.11|Tram1|ENSMUSG00000025935.11|translocating chain-associating membrane protein 1
mm39_v1_chr6_-_52203146_52203176	2.64173	AAUGCCC	ENSMUST00000114425.3|Hoxa9|ENSMUSG00000038227.16|homeobox A9
mm39_v1_chrX_-_141749704_141749730	2.61657	AAUGCCC	ENSMUST00000041317.3|Ammecr1|ENSMUSG00000042225.4|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
mm39_v1_chr18_-_61533434_61533520	2.6033	AAUGCCC	ENSMUST00000063307.6|Ppargc1b|ENSMUSG00000033871.15|peroxisome proliferative activated receptor, gamma, coactivator 1 beta	ENSMUST00000075299.13|Ppargc1b|ENSMUSG00000033871.15|peroxisome proliferative activated receptor, gamma, coactivator 1 beta
mm39_v1_chr11_-_53313950_53313997	2.50459	AAUGCCC	ENSMUST00000036045.6|Leap2|ENSMUSG00000036216.6|liver-expressed antimicrobial peptide 2
mm39_v1_chr10_+_98943999_98944068	2.28075	AAUGCCC	ENSMUST00000161240.4|Galnt4|ENSMUSG00000090035.4|polypeptide N-acetylgalactosaminyltransferase 4
mm39_v1_chr7_-_118091135_118091198	2.2609	AAUGCCC	ENSMUST00000178344.3|Itpripl2|ENSMUSG00000095115.3|inositol 1,4,5-triphosphate receptor interacting protein-like 2
mm39_v1_chr8_-_80784619_80784646	2.11643	AAUGCCC	ENSMUST00000079038.4|Hhip|ENSMUSG00000064325.5|Hedgehog-interacting protein
mm39_v1_chr3_+_90434160_90434191	2.06924	AAUGCCC	ENSMUST00000199538.5|S100a14|ENSMUSG00000042306.12|S100 calcium binding protein A14	ENSMUST00000164481.7|S100a14|ENSMUSG00000042306.12|S100 calcium binding protein A14	ENSMUST00000167598.6|S100a14|ENSMUSG00000042306.12|S100 calcium binding protein A14
mm39_v1_chr10_+_87695117_87695128	2.05118	AAUGCCC	ENSMUST00000105300.9|Igf1|ENSMUSG00000020053.19|insulin-like growth factor 1
mm39_v1_chr2_-_53081199_53081296	2.01384	AAUGCCC	ENSMUST00000239398.2|Prpf40a|ENSMUSG00000061136.17|pre-mRNA processing factor 40A	ENSMUST00000076313.14|Prpf40a|ENSMUSG00000061136.17|pre-mRNA processing factor 40A	ENSMUST00000210789.3|Prpf40a|ENSMUSG00000061136.17|pre-mRNA processing factor 40A
mm39_v1_chr15_-_73056713_73056822	1.96153	AAUGCCC	ENSMUST00000044113.12|Ago2|ENSMUSG00000036698.12|argonaute RISC catalytic subunit 2
mm39_v1_chr6_-_148847854_148847995	1.8895	AAUGCCC	ENSMUST00000139355.8|Sinhcaf|ENSMUSG00000039985.15|SIN3-HDAC complex associated factor	ENSMUST00000146457.2|Sinhcaf|ENSMUSG00000039985.15|SIN3-HDAC complex associated factor	ENSMUST00000054080.15|Sinhcaf|ENSMUSG00000039985.15|SIN3-HDAC complex associated factor
mm39_v1_chr11_+_33913013_33913013	1.79184	AAUGCCC	ENSMUST00000020362.3|Kcnmb1|ENSMUSG00000020155.3|potassium large conductance calcium-activated channel, subfamily M, beta member 1
mm39_v1_chr10_+_39608094_39608137	1.77924	AAUGCCC	ENSMUST00000019986.13|Rev3l|ENSMUSG00000019841.16|REV3 like, DNA directed polymerase zeta catalytic subunit
mm39_v1_chr9_-_57552844_57552955	1.75614	AAUGCCC	ENSMUST00000216979.2|Csk|ENSMUSG00000032312.8|c-src tyrosine kinase	ENSMUST00000034863.8|Csk|ENSMUSG00000032312.8|c-src tyrosine kinase
mm39_v1_chr4_-_3938352_3938401	1.72335	AAUGCCC	ENSMUST00000003369.10|Plag1|ENSMUSG00000003282.10|pleiomorphic adenoma gene 1
mm39_v1_chr10_-_118705029_118705091	1.68488	AAUGCCC	ENSMUST00000004281.10|Dyrk2|ENSMUSG00000028630.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
mm39_v1_chr19_+_43678109_43678133	1.66237	AAUGCCC	ENSMUST00000081079.6|Entpd7|ENSMUSG00000025192.14|ectonucleoside triphosphate diphosphohydrolase 7
mm39_v1_chr10_+_88721854_88721872	1.56527	AAUGCCC	ENSMUST00000020255.8|Slc5a8|ENSMUSG00000020062.8|solute carrier family 5 (iodide transporter), member 8
mm39_v1_chr8_-_116434517_116434533	1.54254	AAUGCCC	ENSMUST00000109104.2|Maf|ENSMUSG00000055435.7|avian musculoaponeurotic fibrosarcoma oncogene homolog
mm39_v1_chr9_-_75466885_75466946	1.52615	AAUGCCC	ENSMUST00000072232.9|Tmod3|ENSMUSG00000058587.10|tropomodulin 3
mm39_v1_chr4_+_99952988_99953064	1.5155	AAUGCCC	ENSMUST00000039630.6|Ror1|ENSMUSG00000035305.6|receptor tyrosine kinase-like orphan receptor 1
mm39_v1_chr6_-_38853097_38853167	1.4812	AAUGCCC	ENSMUST00000161779.8|Hipk2|ENSMUSG00000061436.16|homeodomain interacting protein kinase 2
mm39_v1_chr4_-_19708910_19709004	1.47388	AAUGCCC	ENSMUST00000108246.9|Wwp1|ENSMUSG00000041058.16|WW domain containing E3 ubiquitin protein ligase 1
mm39_v1_chr9_+_108569315_108569392	1.35984	AAUGCCC	ENSMUST00000035220.12|Prkar2a|ENSMUSG00000032601.14|protein kinase, cAMP dependent regulatory, type II alpha
mm39_v1_chr4_+_59189239_59189257	1.29985	AAUGCCC	ENSMUST00000030074.8|Ugcg|ENSMUSG00000028381.9|UDP-glucose ceramide glucosyltransferase
mm39_v1_chr15_+_102314809_102314833	1.2757	AAUGCCC	ENSMUST00000001326.7|Sp1|ENSMUSG00000001280.14|trans-acting transcription factor 1
mm39_v1_chr15_+_58287305_58287361	1.26967	AAUGCCC	ENSMUST00000037270.5|Fam91a1|ENSMUSG00000037119.5|family with sequence similarity 91, member A1
mm39_v1_chr7_-_70010341_70010494	1.25846	AAUGCCC	ENSMUST00000032768.15|Nr2f2|ENSMUSG00000030551.15|nuclear receptor subfamily 2, group F, member 2
mm39_v1_chr7_-_16761790_16761846	1.24114	AAUGCCC	ENSMUST00000003183.12|Ppp5c|ENSMUSG00000003099.12|protein phosphatase 5, catalytic subunit
mm39_v1_chr11_+_95010935_95010954	1.22468	AAUGCCC	ENSMUST00000092768.7|Dlx3|ENSMUSG00000001510.9|distal-less homeobox 3
mm39_v1_chr4_-_155306992_155307049	1.20754	AAUGCCC	ENSMUST00000084103.10|Ski|ENSMUSG00000029050.16|ski sarcoma viral oncogene homolog (avian)	ENSMUST00000030917.6|Ski|ENSMUSG00000029050.16|ski sarcoma viral oncogene homolog (avian)
mm39_v1_chr10_+_11157047_11157103	1.15894	AAUGCCC	ENSMUST00000129456.8|Fbxo30|ENSMUSG00000047648.14|F-box protein 30
mm39_v1_chr4_+_135899678_135899738	1.14774	AAUGCCC	ENSMUST00000061721.6|E2f2|ENSMUSG00000018983.10|E2F transcription factor 2
mm39_v1_chr10_+_21870565_21870591	1.12028	AAUGCCC	ENSMUST00000020145.12|Sgk1|ENSMUSG00000019970.16|serum/glucocorticoid regulated kinase 1
mm39_v1_chr3_-_121608859_121608951	1.05687	AAUGCCC	ENSMUST00000029770.8|Abcd3|ENSMUSG00000028127.11|ATP-binding cassette, sub-family D (ALD), member 3
mm39_v1_chr16_-_30207348_30207348	1.03119	AAUGCCC	ENSMUST00000061350.13|Atp13a3|ENSMUSG00000022533.15|ATPase type 13A3	ENSMUST00000100013.9|Atp13a3|ENSMUSG00000022533.15|ATPase type 13A3
mm39_v1_chr10_-_120312374_120312388	1.02492	AAUGCCC	ENSMUST00000072777.14|Hmga2|ENSMUSG00000056758.15|high mobility group AT-hook 2	ENSMUST00000159699.2|Hmga2|ENSMUSG00000056758.15|high mobility group AT-hook 2
mm39_v1_chr9_+_121946321_121946401	1.00301	AAUGCCC	ENSMUST00000119215.9|Snrk|ENSMUSG00000038145.18|SNF related kinase	ENSMUST00000146832.8|Snrk|ENSMUSG00000038145.18|SNF related kinase	ENSMUST00000118886.9|Snrk|ENSMUSG00000038145.18|SNF related kinase	ENSMUST00000120173.9|Snrk|ENSMUSG00000038145.18|SNF related kinase	ENSMUST00000139181.2|Snrk|ENSMUSG00000038145.18|SNF related kinase
mm39_v1_chr8_+_77626400_77626456	1.00199	AAUGCCC	ENSMUST00000109913.9|Nr3c2|ENSMUSG00000031618.14|nuclear receptor subfamily 3, group C, member 2
mm39_v1_chr11_+_28803188_28803259	0.958517	AAUGCCC	ENSMUST00000020759.12|Efemp1|ENSMUSG00000020467.16|epidermal growth factor-containing fibulin-like extracellular matrix protein 1
mm39_v1_chr4_-_131939548_131939614	0.948046	AAUGCCC	ENSMUST00000152796.8|Ythdf2|ENSMUSG00000040025.18|YTH N6-methyladenosine RNA binding protein 2
mm39_v1_chr3_-_27764571_27764616	0.934838	AAUGCCC	ENSMUST00000046157.10|Fndc3b|ENSMUSG00000039286.13|fibronectin type III domain containing 3B
mm39_v1_chr19_-_31742427_31742480	0.859574	AAUGCCC	ENSMUST00000065067.14|Prkg1|ENSMUSG00000052920.17|protein kinase, cGMP-dependent, type I
mm39_v1_chr15_+_6737853_6737883	0.85664	AAUGCCC	ENSMUST00000061656.8|Rictor|ENSMUSG00000050310.10|RPTOR independent companion of MTOR, complex 2
mm39_v1_chr19_-_29783389_29783389	0.848121	AAUGCCC	ENSMUST00000177155.8|9930021J03Rik|ENSMUSG00000046138.16|RIKEN cDNA 9930021J03 gene
mm39_v1_chr9_-_71499628_71499654	0.810748	AAUGCCC	ENSMUST00000093823.8|Myzap|ENSMUSG00000041361.14|myocardial zonula adherens protein
mm39_v1_chr9_+_72439496_72439553	0.8096	AAUGCCC	ENSMUST00000163401.9|Rfx7|ENSMUSG00000037674.16|regulatory factor X, 7	ENSMUST00000093820.10|Rfx7|ENSMUSG00000037674.16|regulatory factor X, 7
mm39_v1_chr7_+_110226857_110226873	0.745886	AAUGCCC	ENSMUST00000033054.10|Adm|ENSMUSG00000030790.16|adrenomedullin
mm39_v1_chr13_+_45543208_45543226	0.736481	AAUGCCC	ENSMUST00000038275.11|Mylip|ENSMUSG00000038175.11|myosin regulatory light chain interacting protein
mm39_v1_chr15_-_98505508_98505519	0.713969	AAUGCCC	ENSMUST00000096224.6|Adcy6|ENSMUSG00000022994.10|adenylate cyclase 6
mm39_v1_chr19_+_32734884_32734900	0.693397	AAUGCCC	ENSMUST00000013807.8|Pten|ENSMUSG00000013663.8|phosphatase and tensin homolog
mm39_v1_chr6_+_115908709_115908819	0.689692	AAUGCCC	ENSMUST00000032471.9|Rho|ENSMUSG00000030324.9|rhodopsin
mm39_v1_chr11_+_20493306_20493338	0.679354	AAUGCCC	ENSMUST00000093292.11|Sertad2|ENSMUSG00000049800.14|SERTA domain containing 2
mm39_v1_chr7_-_115637970_115637985	0.6556	AAUGCCC	ENSMUST00000166877.8|Sox6|ENSMUSG00000051910.14|SRY (sex determining region Y)-box 6
mm39_v1_chr19_+_6356486_6356604	0.653605	AAUGCCC	ENSMUST00000025681.8|Cdc42bpg|ENSMUSG00000024769.8|CDC42 binding protein kinase gamma (DMPK-like)
mm39_v1_chr13_-_34529157_34529257	0.647276	AAUGCCC	ENSMUST00000040336.12|Slc22a23|ENSMUSG00000038267.16|solute carrier family 22, member 23
mm39_v1_chr13_-_64422693_64422761	0.625452	AAUGCCC	ENSMUST00000109770.2|Cdc14b|ENSMUSG00000033102.16|CDC14 cell division cycle 14B
mm39_v1_chr19_-_6899173_6899208	0.612471	AAUGCCC	ENSMUST00000025906.12|Esrra|ENSMUSG00000024955.16|estrogen related receptor, alpha	ENSMUST00000239322.2|Esrra|ENSMUSG00000024955.16|estrogen related receptor, alpha
mm39_v1_chr4_-_82423985_82424044	0.612161	AAUGCCC	ENSMUST00000107245.9|Nfib|ENSMUSG00000008575.18|nuclear factor I/B	ENSMUST00000107246.2|Nfib|ENSMUSG00000008575.18|nuclear factor I/B
mm39_v1_chr18_-_39623698_39623771	0.587475	AAUGCCC	ENSMUST00000115567.8|Nr3c1|ENSMUSG00000024431.16|nuclear receptor subfamily 3, group C, member 1
mm39_v1_chr1_-_170978157_170978180	0.581348	AAUGCCC	ENSMUST00000155798.2|Sdhc|ENSMUSG00000058076.13|succinate dehydrogenase complex, subunit C, integral membrane protein	ENSMUST00000081560.5|Sdhc|ENSMUSG00000058076.13|succinate dehydrogenase complex, subunit C, integral membrane protein	ENSMUST00000111336.10|Sdhc|ENSMUSG00000058076.13|succinate dehydrogenase complex, subunit C, integral membrane protein
mm39_v1_chr5_+_110283689_110283791	0.578917	AAUGCCC	ENSMUST00000200038.2|Chfr|ENSMUSG00000014668.16|checkpoint with forkhead and ring finger domains	ENSMUST00000112519.9|Chfr|ENSMUSG00000014668.16|checkpoint with forkhead and ring finger domains	ENSMUST00000198633.5|Chfr|ENSMUSG00000014668.16|checkpoint with forkhead and ring finger domains	ENSMUST00000014812.13|Chfr|ENSMUSG00000014668.16|checkpoint with forkhead and ring finger domains	ENSMUST00000199811.3|Chfr|ENSMUSG00000014668.16|checkpoint with forkhead and ring finger domains
mm39_v1_chr5_-_96309849_96309956	0.577375	AAUGCCC	ENSMUST00000155901.8|Cnot6l|ENSMUSG00000034724.19|CCR4-NOT transcription complex, subunit 6-like
mm39_v1_chr19_-_47452840_47452894	0.563151	AAUGCCC	ENSMUST00000081619.10|Sh3pxd2a|ENSMUSG00000053617.13|SH3 and PX domains 2A
mm39_v1_chr8_-_78451055_78451113	0.552293	AAUGCCC	ENSMUST00000034029.8|Ednra|ENSMUSG00000031616.8|endothelin receptor type A
mm39_v1_chr1_-_57011595_57011661	0.535919	AAUGCCC	ENSMUST00000042857.14|Satb2|ENSMUSG00000038331.16|special AT-rich sequence binding protein 2
mm39_v1_chr7_-_46658144_46658169	0.531428	AAUGCCC	ENSMUST00000061639.10|Spty2d1|ENSMUSG00000049516.10|SPT2 chromatin protein domain containing 1
mm39_v1_chr3_+_88439616_88439703	0.51187	AAUGCCC	ENSMUST00000172699.2|Mex3a|ENSMUSG00000074480.5|mex3 RNA binding family member A
mm39_v1_chr6_-_114898739_114898798	0.505362	AAUGCCC	ENSMUST00000032459.14|Vgll4|ENSMUSG00000030315.16|vestigial like family member 4
mm39_v1_chr9_+_113760002_113760055	0.476737	AAUGCCC	ENSMUST00000084885.12|Ubp1|ENSMUSG00000009741.16|upstream binding protein 1	ENSMUST00000009885.14|Ubp1|ENSMUSG00000009741.16|upstream binding protein 1
mm39_v1_chr1_+_9868332_9868451	0.470996	AAUGCCC	ENSMUST00000166384.8|Sgk3|ENSMUSG00000025915.15|serum/glucocorticoid regulated kinase 3	ENSMUST00000168907.8|Sgk3|ENSMUSG00000025915.15|serum/glucocorticoid regulated kinase 3
mm39_v1_chr5_-_120726721_120726743	0.46435	AAUGCCC	ENSMUST00000046426.10|Tpcn1|ENSMUSG00000032741.10|two pore channel 1
mm39_v1_chr1_-_134006847_134006862	0.463408	AAUGCCC	ENSMUST00000020692.7|Btg2|ENSMUSG00000020423.7|BTG anti-proliferation factor 2
mm39_v1_chr17_-_80787398_80787398	0.462011	AAUGCCC	ENSMUST00000068714.7|Sos1|ENSMUSG00000024241.8|SOS Ras/Rac guanine nucleotide exchange factor 1
mm39_v1_chr14_+_117163215_117163348	0.445639	AAUGCCC	ENSMUST00000078849.12|Gpc6|ENSMUSG00000058571.12|glypican 6
mm39_v1_chr19_-_5156995_5157100	0.428968	AAUGCCC	ENSMUST00000237438.2|Rab1b|ENSMUSG00000024870.7|RAB1B, member RAS oncogene family	ENSMUST00000236149.2|Rab1b|ENSMUSG00000024870.7|RAB1B, member RAS oncogene family	ENSMUST00000025804.7|Rab1b|ENSMUSG00000024870.7|RAB1B, member RAS oncogene family
mm39_v1_chr15_-_93173032_93173060	0.428738	AAUGCCC	ENSMUST00000057896.5|Gxylt1|ENSMUSG00000036197.17|glucoside xylosyltransferase 1	ENSMUST00000049484.13|Gxylt1|ENSMUSG00000036197.17|glucoside xylosyltransferase 1	ENSMUST00000230063.2|Gxylt1|ENSMUSG00000036197.17|glucoside xylosyltransferase 1
mm39_v1_chr8_+_89247976_89247999	0.422483	AAUGCCC	ENSMUST00000034086.13|Nkd1|ENSMUSG00000031661.13|naked cuticle 1
mm39_v1_chr4_+_41465134_41465164	0.414004	AAUGCCC	ENSMUST00000030154.7|Nudt2|ENSMUSG00000028443.7|nudix (nucleoside diphosphate linked moiety X)-type motif 2
mm39_v1_chr12_-_73093953_73093953	0.393495	AAUGCCC	ENSMUST00000050029.8|Six1|ENSMUSG00000051367.9|sine oculis-related homeobox 1
mm39_v1_chr11_-_104333059_104333117	0.336136	AAUGCCC	ENSMUST00000106977.8|Kansl1|ENSMUSG00000018412.17|KAT8 regulatory NSL complex subunit 1	ENSMUST00000106972.8|Kansl1|ENSMUSG00000018412.17|KAT8 regulatory NSL complex subunit 1
mm39_v1_chr14_-_31552608_31552689	0.334339	AAUGCCC	ENSMUST00000014640.9|Ankrd28|ENSMUSG00000014496.9|ankyrin repeat domain 28
mm39_v1_chr2_+_18681812_18681842	0.295783	AAUGCCC	ENSMUST00000028071.13|Bmi1|ENSMUSG00000026739.14|Bmi1 polycomb ring finger oncogene
mm39_v1_chr16_+_33201164_33201206	0.289705	AAUGCCC	ENSMUST00000165418.9|Zfp148|ENSMUSG00000022811.18|zinc finger protein 148
mm39_v1_chr6_-_22356098_22356174	0.288244	AAUGCCC	ENSMUST00000165576.8|Fam3c|ENSMUSG00000029672.17|family with sequence similarity 3, member C
mm39_v1_chr12_-_73160181_73160230	0.286664	AAUGCCC	ENSMUST00000043208.8|Six4|ENSMUSG00000034460.10|sine oculis-related homeobox 4	ENSMUST00000175693.3|Six4|ENSMUSG00000034460.10|sine oculis-related homeobox 4
mm39_v1_chr2_+_173501553_173501664	0.281998	AAUGCCC	ENSMUST00000029024.10|Rab22a|ENSMUSG00000027519.11|RAB22A, member RAS oncogene family	ENSMUST00000109110.4|Rab22a|ENSMUSG00000027519.11|RAB22A, member RAS oncogene family
mm39_v1_chr6_-_39702381_39702413	0.280142	AAUGCCC	ENSMUST00000002487.15|Braf|ENSMUSG00000002413.16|Braf transforming gene
mm39_v1_chr1_-_105284383_105284402	0.269264	AAUGCCC	ENSMUST00000058688.7|Rnf152|ENSMUSG00000047496.7|ring finger protein 152
mm39_v1_chr10_-_91007387_91007468	0.267383	AAUGCCC	ENSMUST00000099355.12|Tmpo|ENSMUSG00000019961.18|thymopoietin	ENSMUST00000105293.11|Tmpo|ENSMUSG00000019961.18|thymopoietin	ENSMUST00000092219.14|Tmpo|ENSMUSG00000019961.18|thymopoietin	ENSMUST00000020123.7|Tmpo|ENSMUSG00000019961.18|thymopoietin	ENSMUST00000072239.14|Tmpo|ENSMUSG00000019961.18|thymopoietin
mm39_v1_chr1_+_131838294_131838310	0.265443	AAUGCCC	ENSMUST00000062264.8|Nucks1|ENSMUSG00000026434.13|nuclear casein kinase and cyclin-dependent kinase substrate 1
mm39_v1_chr9_+_108782646_108782661	0.265296	AAUGCCC	ENSMUST00000112070.8|Col7a1|ENSMUSG00000025650.14|collagen, type VII, alpha 1
mm39_v1_chr9_+_106048116_106048153	0.261077	AAUGCCC	ENSMUST00000020490.13|Wdr82|ENSMUSG00000020257.14|WD repeat domain containing 82
mm39_v1_chr6_-_88423464_88423521	0.245148	AAUGCCC	ENSMUST00000204459.3|Eefsec|ENSMUSG00000033216.10|eukaryotic elongation factor, selenocysteine-tRNA-specific	ENSMUST00000203213.3|Eefsec|ENSMUSG00000033216.10|eukaryotic elongation factor, selenocysteine-tRNA-specific	ENSMUST00000205179.3|Eefsec|ENSMUSG00000033216.10|eukaryotic elongation factor, selenocysteine-tRNA-specific	ENSMUST00000165242.4|Eefsec|ENSMUSG00000033216.10|eukaryotic elongation factor, selenocysteine-tRNA-specific
mm39_v1_chr2_+_109721189_109721226	0.244374	AAUGCCC	ENSMUST00000028583.8|Lin7c|ENSMUSG00000027162.8|lin-7 homolog C (C. elegans)
mm39_v1_chr19_-_46033353_46033724	0.241248	AAUGCCC	ENSMUST00000026252.14|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1	ENSMUST00000156585.9|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1	ENSMUST00000185355.7|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1	ENSMUST00000152946.8|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1
mm39_v1_chr17_+_28128307_28128532	0.221469	AAUGCCC	ENSMUST00000233525.2|Anks1|ENSMUSG00000024219.17|ankyrin repeat and SAM domain containing 1	ENSMUST00000025058.15|Anks1|ENSMUSG00000024219.17|ankyrin repeat and SAM domain containing 1	ENSMUST00000233866.2|Anks1|ENSMUSG00000024219.17|ankyrin repeat and SAM domain containing 1
mm39_v1_chr11_+_77576981_77577005	0.218845	AAUGCCC	ENSMUST00000100802.11|Nufip2|ENSMUSG00000037857.17|nuclear fragile X mental retardation protein interacting protein 2	ENSMUST00000181023.2|Nufip2|ENSMUSG00000037857.17|nuclear fragile X mental retardation protein interacting protein 2
mm39_v1_chr12_-_56581823_56581891	0.205544	AAUGCCC	ENSMUST00000178477.9|Nkx2-1|ENSMUSG00000001496.16|NK2 homeobox 1
mm39_v1_chr5_-_90514360_90514469	0.20458	AAUGCCC	ENSMUST00000168058.7|Ankrd17|ENSMUSG00000055204.16|ankyrin repeat domain 17	ENSMUST00000014421.15|Ankrd17|ENSMUSG00000055204.16|ankyrin repeat domain 17
mm39_v1_chr11_+_77873535_77873649	0.188693	AAUGCCC	ENSMUST00000108360.8|Phf12|ENSMUSG00000037791.16|PHD finger protein 12	ENSMUST00000049167.14|Phf12|ENSMUSG00000037791.16|PHD finger protein 12
mm39_v1_chr10_-_128481833_128481881	0.187418	AAUGCCC	ENSMUST00000133342.10|Ikzf4|ENSMUSG00000002578.19|IKAROS family zinc finger 4
mm39_v1_chr10_-_44334711_44334747	0.175664	AAUGCCC	ENSMUST00000039174.11|Prdm1|ENSMUSG00000038151.14|PR domain containing 1, with ZNF domain
mm39_v1_chr8_+_26092252_26092335	0.159988	AAUGCCC	ENSMUST00000136107.9|Nsd3|ENSMUSG00000054823.18|nuclear receptor binding SET domain protein 3	ENSMUST00000146919.8|Nsd3|ENSMUSG00000054823.18|nuclear receptor binding SET domain protein 3	ENSMUST00000139966.8|Nsd3|ENSMUSG00000054823.18|nuclear receptor binding SET domain protein 3	ENSMUST00000142395.8|Nsd3|ENSMUSG00000054823.18|nuclear receptor binding SET domain protein 3	ENSMUST00000143445.2|Nsd3|ENSMUSG00000054823.18|nuclear receptor binding SET domain protein 3
mm39_v1_chr2_+_48704121_48704187	0.159379	AAUGCCC	ENSMUST00000063886.4|Acvr2a|ENSMUSG00000052155.6|activin receptor IIA
mm39_v1_chr2_-_12306722_12306734	0.154574	AAUGCCC	ENSMUST00000028106.11|Itga8|ENSMUSG00000026768.11|integrin alpha 8
mm39_v1_chr14_-_47805861_47805896	0.15174	AAUGCCC	ENSMUST00000228784.2|Atg14|ENSMUSG00000037526.8|autophagy related 14	ENSMUST00000042988.7|Atg14|ENSMUSG00000037526.8|autophagy related 14
mm39_v1_chr10_-_121422635_121422708	0.140846	AAUGCCC	ENSMUST00000219493.2|Tbk1|ENSMUSG00000020115.4|TANK-binding kinase 1	ENSMUST00000020316.4|Tbk1|ENSMUSG00000020115.4|TANK-binding kinase 1
mm39_v1_chr6_+_21949570_21949684	0.134509	AAUGCCC	ENSMUST00000031680.10|Ing3|ENSMUSG00000029670.13|inhibitor of growth family, member 3	ENSMUST00000115389.8|Ing3|ENSMUSG00000029670.13|inhibitor of growth family, member 3	ENSMUST00000151473.8|Ing3|ENSMUSG00000029670.13|inhibitor of growth family, member 3
mm39_v1_chr10_+_53473032_53473100	0.130767	AAUGCCC	ENSMUST00000020004.8|Asf1a|ENSMUSG00000019857.8|anti-silencing function 1A histone chaperone
mm39_v1_chr10_-_56104732_56104791	0.117526	AAUGCCC	ENSMUST00000099739.5|Tbc1d32|ENSMUSG00000038122.10|TBC1 domain family, member 32
mm39_v1_chr6_-_138020409_138020479	0.113499	AAUGCCC	ENSMUST00000111873.8|Slc15a5|ENSMUSG00000044378.13|solute carrier family 15, member 5	ENSMUST00000141280.3|Slc15a5|ENSMUSG00000044378.13|solute carrier family 15, member 5
mm39_v1_chr8_+_91555449_91555470	0.104696	AAUGCCC	ENSMUST00000109614.9|Chd9|ENSMUSG00000056608.15|chromodomain helicase DNA binding protein 9
mm39_v1_chr1_+_74545203_74545264	0.0931811	AAUGCCC	ENSMUST00000087215.7|Cnot9|ENSMUSG00000026174.10|CCR4-NOT transcription complex, subunit 9
mm39_v1_chr16_-_11021116_11021195	0.0909579	AAUGCCC	ENSMUST00000230002.2|Rsl1d1|ENSMUSG00000005846.13|ribosomal L1 domain containing 1	ENSMUST00000119953.2|Rsl1d1|ENSMUSG00000005846.13|ribosomal L1 domain containing 1
mm39_v1_chr4_-_129636073_129636106	0.0756698	AAUGCCC	ENSMUST00000066257.6|Khdrbs1|ENSMUSG00000028790.14|KH domain containing, RNA binding, signal transduction associated 1
mm39_v1_chr4_+_63462984_63463009	0.0733843	AAUGCCC	ENSMUST00000035301.7|Atp6v1g1|ENSMUSG00000039105.7|ATPase, H+ transporting, lysosomal V1 subunit G1
mm39_v1_chr15_+_58805605_58805685	0.0544302	AAUGCCC	ENSMUST00000022980.5|Ndufb9|ENSMUSG00000022354.5|NADH:ubiquinone oxidoreductase subunit B9
mm39_v1_chr11_+_87938519_87938554	0.0465728	AAUGCCC	ENSMUST00000079866.11|Srsf1|ENSMUSG00000018379.18|serine and arginine-rich splicing factor 1
mm39_v1_chr19_+_53298906_53298983	0.0448949	AAUGCCC	ENSMUST00000003870.15|Mxi1|ENSMUSG00000025025.15|MAX interactor 1, dimerization protein
mm39_v1_chrX_-_102865546_102865598	0.0336961	AAUGCCC	ENSMUST00000042664.10|Slc16a2|ENSMUSG00000033965.11|solute carrier family 16 (monocarboxylic acid transporters), member 2
mm39_v1_chr4_+_126915104_126915133	0.0206867	AAUGCCC	ENSMUST00000030623.8|Sfpq|ENSMUSG00000028820.14|splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
mm39_v1_chr2_-_48839276_48839288	0.0202276	AAUGCCC	ENSMUST00000028098.11|Orc4|ENSMUSG00000026761.13|origin recognition complex, subunit 4
mm39_v1_chr8_+_105067159_105067255	0.0186745	AAUGCCC	ENSMUST00000212948.2|Cmtm3|ENSMUSG00000031875.8|CKLF-like MARVEL transmembrane domain containing 3	ENSMUST00000034343.5|Cmtm3|ENSMUSG00000031875.8|CKLF-like MARVEL transmembrane domain containing 3
mm39_v1_chr8_+_13389656_13389674	0.0114386	AAUGCCC	ENSMUST00000210165.2|Tfdp1|ENSMUSG00000038482.12|transcription factor Dp 1	ENSMUST00000170909.2|Tfdp1|ENSMUSG00000038482.12|transcription factor Dp 1
mm39_v1_chr10_+_86136236_86136467	0.00961362	AAUGCCC	ENSMUST00000020234.14|Timp3|ENSMUSG00000020044.14|tissue inhibitor of metalloproteinase 3
mm39_v1_chr15_-_98769056_98769085	0.00894969	AAUGCCC	ENSMUST00000178486.9|Kmt2d|ENSMUSG00000048154.18|lysine (K)-specific methyltransferase 2D	ENSMUST00000023741.16|Kmt2d|ENSMUSG00000048154.18|lysine (K)-specific methyltransferase 2D
