mm39_v1_chr9_+_74769166_74769203	3.20776	ACCCUGU	ENSMUST00000056006.11|Onecut1|ENSMUSG00000043013.11|one cut domain, family member 1
mm39_v1_chr4_-_91260265_91260306	2.31458	ACCCUGU	ENSMUST00000107110.8|Elavl2|ENSMUSG00000008489.19|ELAV like RNA binding protein 1	ENSMUST00000008633.15|Elavl2|ENSMUSG00000008489.19|ELAV like RNA binding protein 1	ENSMUST00000107118.8|Elavl2|ENSMUSG00000008489.19|ELAV like RNA binding protein 1
mm39_v1_chr12_+_29578354_29578468	2.24879	ACCCUGU	ENSMUST00000218583.2|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like	ENSMUST00000049784.17|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like
mm39_v1_chr6_-_136150076_136150146	2.18903	ACCCUGU	ENSMUST00000053880.13|Grin2b|ENSMUSG00000030209.15|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm39_v1_chr13_+_117738972_117739018	2.10273	ACCCUGU	ENSMUST00000006991.9|Hcn1|ENSMUSG00000021730.9|hyperpolarization activated cyclic nucleotide gated potassium channel 1
mm39_v1_chr5_+_125609440_125609457	2.03979	ACCCUGU	ENSMUST00000031446.7|Tmem132b|ENSMUSG00000070498.4|transmembrane protein 132B
mm39_v1_chr15_+_85619958_85620010	1.8426	ACCCUGU	ENSMUST00000109422.8|Ppara|ENSMUSG00000022383.14|peroxisome proliferator activated receptor alpha
mm39_v1_chr1_+_153528689_153528771	1.81539	ACCCUGU	ENSMUST00000041776.12|Rgs8|ENSMUSG00000042671.13|regulator of G-protein signaling 8
mm39_v1_chr8_+_14145848_14145931	1.77132	ACCCUGU	ENSMUST00000152652.8|Dlgap2|ENSMUSG00000047495.16|DLG associated protein 2	ENSMUST00000133298.8|Dlgap2|ENSMUSG00000047495.16|DLG associated protein 2
mm39_v1_chr6_-_113172340_113172349	1.70499	ACCCUGU	ENSMUST00000162280.2|Lhfpl4|ENSMUSG00000042873.12|lipoma HMGIC fusion partner-like protein 4
mm39_v1_chr12_-_75224099_75224133	1.68358	ACCCUGU	ENSMUST00000042299.4|Kcnh5|ENSMUSG00000034402.4|potassium voltage-gated channel, subfamily H (eag-related), member 5
mm39_v1_chr11_+_42310557_42310612	1.45217	ACCCUGU	ENSMUST00000007797.10|Gabrb2|ENSMUSG00000007653.13|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2
mm39_v1_chr15_+_39061612_39061758	1.41105	ACCCUGU	ENSMUST00000082054.12|Rims2|ENSMUSG00000037386.17|regulating synaptic membrane exocytosis 2	ENSMUST00000227243.2|Rims2|ENSMUSG00000037386.17|regulating synaptic membrane exocytosis 2	ENSMUST00000042917.10|Rims2|ENSMUSG00000037386.17|regulating synaptic membrane exocytosis 2
mm39_v1_chr9_+_68561042_68561068	1.3899	ACCCUGU	ENSMUST00000034766.14|Rora|ENSMUSG00000032238.18|RAR-related orphan receptor alpha
mm39_v1_chr10_-_43050516_43050565	1.36048	ACCCUGU	ENSMUST00000040275.9|Sobp|ENSMUSG00000038248.9|sine oculis binding protein
mm39_v1_chr7_+_46445512_46445558	1.3469	ACCCUGU	ENSMUST00000006774.11|Gtf2h1|ENSMUSG00000006599.14|general transcription factor II H, polypeptide 1	ENSMUST00000165031.8|Gtf2h1|ENSMUSG00000006599.14|general transcription factor II H, polypeptide 1
mm39_v1_chr6_+_103487973_103488039	1.34684	ACCCUGU	ENSMUST00000066905.9|Chl1|ENSMUSG00000030077.12|cell adhesion molecule L1-like
mm39_v1_chr9_+_72714156_72714156	1.26822	ACCCUGU	ENSMUST00000055535.9|Prtg|ENSMUSG00000036030.10|protogenin
mm39_v1_chr11_-_37126709_37126821	1.23306	ACCCUGU	ENSMUST00000102801.8|Tenm2|ENSMUSG00000049336.17|teneurin transmembrane protein 2
mm39_v1_chr16_-_17745999_17746083	1.22807	ACCCUGU	ENSMUST00000003622.16|Slc25a1|ENSMUSG00000003528.16|solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1
mm39_v1_chr6_-_120470768_120470874	1.22179	ACCCUGU	ENSMUST00000178687.2|Tmem121b|ENSMUSG00000094626.2|transmembrane protein 121B
mm39_v1_chr2_-_73722874_73722900	1.19357	ACCCUGU	ENSMUST00000136958.8|Atf2|ENSMUSG00000027104.19|activating transcription factor 2	ENSMUST00000112010.9|Atf2|ENSMUSG00000027104.19|activating transcription factor 2	ENSMUST00000128531.8|Atf2|ENSMUSG00000027104.19|activating transcription factor 2	ENSMUST00000112017.8|Atf2|ENSMUSG00000027104.19|activating transcription factor 2
mm39_v1_chr6_-_113478779_113478910	1.16185	ACCCUGU	ENSMUST00000101059.4|Prrt3|ENSMUSG00000045009.10|proline-rich transmembrane protein 3	ENSMUST00000204268.3|Prrt3|ENSMUSG00000045009.10|proline-rich transmembrane protein 3	ENSMUST00000205170.2|Prrt3|ENSMUSG00000045009.10|proline-rich transmembrane protein 3	ENSMUST00000205075.2|Prrt3|ENSMUSG00000045009.10|proline-rich transmembrane protein 3	ENSMUST00000204134.3|Prrt3|ENSMUSG00000045009.10|proline-rich transmembrane protein 3
mm39_v1_chr18_-_77652820_77652858	1.11057	ACCCUGU	ENSMUST00000026494.14|Rnf165|ENSMUSG00000025427.16|ring finger protein 165	ENSMUST00000182024.2|Rnf165|ENSMUSG00000025427.16|ring finger protein 165
mm39_v1_chr11_-_6015736_6015755	1.07821	ACCCUGU	ENSMUST00000002817.12|Camk2b|ENSMUSG00000057897.15|calcium/calmodulin-dependent protein kinase II, beta	ENSMUST00000109813.9|Camk2b|ENSMUSG00000057897.15|calcium/calmodulin-dependent protein kinase II, beta	ENSMUST00000090443.10|Camk2b|ENSMUSG00000057897.15|calcium/calmodulin-dependent protein kinase II, beta
mm39_v1_chr7_-_109092834_109092945	1.06973	ACCCUGU	ENSMUST00000106739.8|Trim66|ENSMUSG00000031026.16|tripartite motif-containing 66
mm39_v1_chr4_-_49845549_49845549	1.03017	ACCCUGU	ENSMUST00000093859.11|Grin3a|ENSMUSG00000039579.16|glutamate receptor ionotropic, NMDA3A	ENSMUST00000076674.4|Grin3a|ENSMUSG00000039579.16|glutamate receptor ionotropic, NMDA3A
mm39_v1_chr19_-_18978463_18978483	1.01351	ACCCUGU	ENSMUST00000040153.15|Rorb|ENSMUSG00000036192.16|RAR-related orphan receptor beta	ENSMUST00000112828.8|Rorb|ENSMUSG00000036192.16|RAR-related orphan receptor beta
mm39_v1_chr7_-_134539993_134540159	0.983082	ACCCUGU	ENSMUST00000171394.3|Insyn2a|ENSMUSG00000073805.6|inhibitory synaptic factor 2A
mm39_v1_chr11_-_103640640_103640655	0.907561	ACCCUGU	ENSMUST00000018630.3|Wnt9b|ENSMUSG00000018486.3|wingless-type MMTV integration site family, member 9B
mm39_v1_chr2_+_65676111_65676142	0.89013	ACCCUGU	ENSMUST00000122912.8|Csrnp3|ENSMUSG00000044647.17|cysteine-serine-rich nuclear protein 3
mm39_v1_chrX_-_87159237_87159281	0.866221	ACCCUGU	ENSMUST00000113966.8|Il1rapl1|ENSMUSG00000052372.11|interleukin 1 receptor accessory protein-like 1	ENSMUST00000113964.2|Il1rapl1|ENSMUSG00000052372.11|interleukin 1 receptor accessory protein-like 1
mm39_v1_chr12_-_80807454_80807502	0.84775	ACCCUGU	ENSMUST00000073251.8|Ccdc177|ENSMUSG00000062961.8|coiled-coil domain containing 177
mm39_v1_chr11_+_74510413_74510469	0.845647	ACCCUGU	ENSMUST00000100866.3|Ccdc92b|ENSMUSG00000069814.7|coiled-coil domain containing 92B
mm39_v1_chr8_-_17585263_17585335	0.821818	ACCCUGU	ENSMUST00000082104.7|Csmd1|ENSMUSG00000060924.16|CUB and Sushi multiple domains 1
mm39_v1_chr4_+_57434247_57434369	0.798596	ACCCUGU	ENSMUST00000102905.8|Pakap|ENSMUSG00000090053.10|paralemmin A kinase anchor protein
mm39_v1_chr14_+_67470884_67471035	0.793691	ACCCUGU	ENSMUST00000176161.8|Ebf2|ENSMUSG00000022053.14|early B cell factor 2
mm39_v1_chr19_+_45352173_45352274	0.759159	ACCCUGU	ENSMUST00000223764.2|Btrc|ENSMUSG00000025217.16|beta-transducin repeat containing protein	ENSMUST00000065601.13|Btrc|ENSMUSG00000025217.16|beta-transducin repeat containing protein	ENSMUST00000224102.2|Btrc|ENSMUSG00000025217.16|beta-transducin repeat containing protein	ENSMUST00000111936.4|Btrc|ENSMUSG00000025217.16|beta-transducin repeat containing protein
mm39_v1_chrX_+_149981074_149981136	0.743637	ACCCUGU	ENSMUST00000184730.8|Wnk3|ENSMUSG00000041245.14|WNK lysine deficient protein kinase 3	ENSMUST00000184392.8|Wnk3|ENSMUSG00000041245.14|WNK lysine deficient protein kinase 3	ENSMUST00000096285.5|Wnk3|ENSMUSG00000041245.14|WNK lysine deficient protein kinase 3
mm39_v1_chr3_-_84212069_84212116	0.733987	ACCCUGU	ENSMUST00000107692.8|Trim2|ENSMUSG00000027993.17|tripartite motif-containing 2
mm39_v1_chr3_-_152687877_152687888	0.657399	ACCCUGU	ENSMUST00000044278.6|St6galnac5|ENSMUSG00000039037.6|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
mm39_v1_chr10_-_83173708_83173746	0.650907	ACCCUGU	ENSMUST00000039956.6|Slc41a2|ENSMUSG00000034591.6|solute carrier family 41, member 2
mm39_v1_chr1_-_136888118_136888234	0.592437	ACCCUGU	ENSMUST00000192357.6|Nr5a2|ENSMUSG00000026398.15|nuclear receptor subfamily 5, group A, member 2	ENSMUST00000027649.14|Nr5a2|ENSMUSG00000026398.15|nuclear receptor subfamily 5, group A, member 2
mm39_v1_chr16_-_67417768_67417810	0.589692	ACCCUGU	ENSMUST00000114292.8|Cadm2|ENSMUSG00000064115.14|cell adhesion molecule 2	ENSMUST00000120898.8|Cadm2|ENSMUSG00000064115.14|cell adhesion molecule 2
mm39_v1_chr4_+_149602673_149602735	0.588026	ACCCUGU	ENSMUST00000030839.13|Ctnnbip1|ENSMUSG00000028988.14|catenin beta interacting protein 1
mm39_v1_chr5_-_74229021_74229099	0.579935	ACCCUGU	ENSMUST00000119154.8|Usp46|ENSMUSG00000054814.15|ubiquitin specific peptidase 46	ENSMUST00000068058.14|Usp46|ENSMUSG00000054814.15|ubiquitin specific peptidase 46
mm39_v1_chr4_+_124696336_124696381	0.578563	ACCCUGU	ENSMUST00000138807.8|Mtf1|ENSMUSG00000028890.14|metal response element binding transcription factor 1	ENSMUST00000030723.3|Mtf1|ENSMUSG00000028890.14|metal response element binding transcription factor 1
mm39_v1_chr2_+_172391501_172391524	0.568961	ACCCUGU	ENSMUST00000030391.9|Tfap2c|ENSMUSG00000028640.12|transcription factor AP-2, gamma
mm39_v1_chr19_+_32734884_32734900	0.566874	ACCCUGU	ENSMUST00000013807.8|Pten|ENSMUSG00000013663.8|phosphatase and tensin homolog
mm39_v1_chr2_-_63928339_63928367	0.558615	ACCCUGU	ENSMUST00000131615.9|Fign|ENSMUSG00000075324.14|fidgetin
mm39_v1_chr9_+_21077010_21077058	0.555522	ACCCUGU	ENSMUST00000039413.15|Pde4a|ENSMUSG00000032177.18|phosphodiesterase 4A, cAMP specific
mm39_v1_chr4_+_139302009_139302036	0.539928	ACCCUGU	ENSMUST00000174078.2|Iffo2|ENSMUSG00000041025.16|intermediate filament family orphan 2
mm39_v1_chr1_-_134289670_134289736	0.468825	ACCCUGU	ENSMUST00000049470.11|Tmem183a|ENSMUSG00000042305.13|transmembrane protein 183A
mm39_v1_chr12_-_119202527_119202599	0.447187	ACCCUGU	ENSMUST00000026360.9|Itgb8|ENSMUSG00000025321.15|integrin beta 8
mm39_v1_chr4_-_136684082_136684176	0.439596	ACCCUGU	ENSMUST00000030420.9|Epha8|ENSMUSG00000028661.9|Eph receptor A8
mm39_v1_chr6_-_126717590_126717644	0.430307	ACCCUGU	ENSMUST00000185333.2|Kcna6|ENSMUSG00000038077.8|potassium voltage-gated channel, shaker-related, subfamily, member 6
mm39_v1_chr9_-_48747232_48747262	0.428442	ACCCUGU	ENSMUST00000093852.5|Zbtb16|ENSMUSG00000066687.6|zinc finger and BTB domain containing 16
mm39_v1_chr12_+_64964674_64964776	0.423927	ACCCUGU	ENSMUST00000058135.6|Gm527|ENSMUSG00000047227.6|predicted gene 527	ENSMUST00000220993.2|Gm527|ENSMUSG00000047227.6|predicted gene 527
mm39_v1_chr2_+_32496990_32497068	0.414471	ACCCUGU	ENSMUST00000095045.9|St6galnac6|ENSMUSG00000026811.19|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	ENSMUST00000095044.10|St6galnac6|ENSMUSG00000026811.19|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	ENSMUST00000126636.8|St6galnac6|ENSMUSG00000026811.19|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
mm39_v1_chr3_+_146110387_146110487	0.406171	ACCCUGU	ENSMUST00000106151.8|Ssx2ip|ENSMUSG00000036825.13|synovial sarcoma, X 2 interacting protein	ENSMUST00000106153.9|Ssx2ip|ENSMUSG00000036825.13|synovial sarcoma, X 2 interacting protein	ENSMUST00000039021.11|Ssx2ip|ENSMUSG00000036825.13|synovial sarcoma, X 2 interacting protein	ENSMUST00000106149.8|Ssx2ip|ENSMUSG00000036825.13|synovial sarcoma, X 2 interacting protein	ENSMUST00000149262.8|Ssx2ip|ENSMUSG00000036825.13|synovial sarcoma, X 2 interacting protein
mm39_v1_chr8_-_40095706_40095721	0.40121	ACCCUGU	ENSMUST00000210525.2|Msr1|ENSMUSG00000025044.17|macrophage scavenger receptor 1	ENSMUST00000170091.3|Msr1|ENSMUSG00000025044.17|macrophage scavenger receptor 1
mm39_v1_chr2_+_121859025_121859137	0.39391	ACCCUGU	ENSMUST00000028668.8|Eif3j1|ENSMUSG00000027236.9|eukaryotic translation initiation factor 3, subunit J1
mm39_v1_chr18_-_61533434_61533520	0.375713	ACCCUGU	ENSMUST00000063307.6|Ppargc1b|ENSMUSG00000033871.15|peroxisome proliferative activated receptor, gamma, coactivator 1 beta	ENSMUST00000075299.13|Ppargc1b|ENSMUSG00000033871.15|peroxisome proliferative activated receptor, gamma, coactivator 1 beta
mm39_v1_chr1_-_23961379_23961508	0.348356	ACCCUGU	ENSMUST00000027339.14|Smap1|ENSMUSG00000026155.14|small ArfGAP 1
mm39_v1_chr15_+_84807582_84807625	0.342926	ACCCUGU	ENSMUST00000165443.4|Nup50|ENSMUSG00000016619.11|nucleoporin 50
mm39_v1_chr13_-_40887244_40887313	0.316848	ACCCUGU	ENSMUST00000110193.9|Tfap2a|ENSMUSG00000021359.17|transcription factor AP-2, alpha
mm39_v1_chr3_+_51323383_51323465	0.278197	ACCCUGU	ENSMUST00000029303.13|Naa15|ENSMUSG00000063273.12|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm39_v1_chr9_-_108526548_108526605	0.245325	ACCCUGU	ENSMUST00000013338.14|Arih2|ENSMUSG00000064145.13|ariadne RBR E3 ubiquitin protein ligase 2	ENSMUST00000193197.6|Arih2|ENSMUSG00000064145.13|ariadne RBR E3 ubiquitin protein ligase 2
mm39_v1_chr7_+_5353536_5353536	0.239387	ACCCUGU	ENSMUST00000056639.8|Gm5065|ENSMUSG00000048398.8|predicted gene 5065
mm39_v1_chr2_-_65397809_65397839	0.235949	ACCCUGU	ENSMUST00000066432.12|Scn3a|ENSMUSG00000057182.16|sodium channel, voltage-gated, type III, alpha
mm39_v1_chr15_+_80118219_80118265	0.2358	ACCCUGU	ENSMUST00000023048.12|Mief1|ENSMUSG00000022412.15|mitochondrial elongation factor 1
mm39_v1_chr1_+_187730018_187730031	0.227899	ACCCUGU	ENSMUST00000027906.13|Esrrg|ENSMUSG00000026610.14|estrogen-related receptor gamma
mm39_v1_chr5_+_65694552_65694576	0.225807	ACCCUGU	ENSMUST00000142407.8|Ube2k|ENSMUSG00000029203.17|ubiquitin-conjugating enzyme E2K
mm39_v1_chr1_+_70764874_70765082	0.217272	ACCCUGU	ENSMUST00000053922.12|Vwc2l|ENSMUSG00000045648.16|von Willebrand factor C domain-containing protein 2-like	ENSMUST00000161937.2|Vwc2l|ENSMUSG00000045648.16|von Willebrand factor C domain-containing protein 2-like	ENSMUST00000162182.2|Vwc2l|ENSMUSG00000045648.16|von Willebrand factor C domain-containing protein 2-like
mm39_v1_chr1_-_67077906_67078065	0.20481	ACCCUGU	ENSMUST00000119559.8|Lancl1|ENSMUSG00000026000.17|LanC (bacterial lantibiotic synthetase component C)-like 1	ENSMUST00000149996.2|Lancl1|ENSMUSG00000026000.17|LanC (bacterial lantibiotic synthetase component C)-like 1	ENSMUST00000027149.12|Lancl1|ENSMUSG00000026000.17|LanC (bacterial lantibiotic synthetase component C)-like 1	ENSMUST00000113979.10|Lancl1|ENSMUSG00000026000.17|LanC (bacterial lantibiotic synthetase component C)-like 1
mm39_v1_chr8_-_27618643_27618715	0.194038	ACCCUGU	ENSMUST00000033877.6|Brf2|ENSMUSG00000031487.6|BRF2, RNA polymerase III transcription initiation factor 50kDa subunit
mm39_v1_chr19_-_5168251_5168350	0.180321	ACCCUGU	ENSMUST00000113728.8|Klc2|ENSMUSG00000024862.17|kinesin light chain 2	ENSMUST00000113727.8|Klc2|ENSMUSG00000024862.17|kinesin light chain 2	ENSMUST00000025798.13|Klc2|ENSMUSG00000024862.17|kinesin light chain 2
mm39_v1_chr9_+_59485475_59485620	0.168879	ACCCUGU	ENSMUST00000118549.8|Celf6|ENSMUSG00000032297.12|CUGBP, Elav-like family member 6	ENSMUST00000034840.10|Celf6|ENSMUSG00000032297.12|CUGBP, Elav-like family member 6
mm39_v1_chr11_+_72580823_72580841	0.166818	ACCCUGU	ENSMUST00000155998.2|Ankfy1|ENSMUSG00000020790.15|ankyrin repeat and FYVE domain containing 1
mm39_v1_chr10_+_11157047_11157103	0.164517	ACCCUGU	ENSMUST00000129456.8|Fbxo30|ENSMUSG00000047648.14|F-box protein 30
mm39_v1_chr13_+_44884740_44884752	0.163052	ACCCUGU	ENSMUST00000173246.8|Jarid2|ENSMUSG00000038518.16|jumonji, AT rich interactive domain 2
mm39_v1_chr3_-_104419128_104419250	0.135611	ACCCUGU	ENSMUST00000199070.5|Lrig2|ENSMUSG00000032913.14|leucine-rich repeats and immunoglobulin-like domains 2	ENSMUST00000046316.11|Lrig2|ENSMUSG00000032913.14|leucine-rich repeats and immunoglobulin-like domains 2	ENSMUST00000198332.2|Lrig2|ENSMUSG00000032913.14|leucine-rich repeats and immunoglobulin-like domains 2
mm39_v1_chr8_+_88925821_88925852	0.127838	ACCCUGU	ENSMUST00000066748.10|Tent4b|ENSMUSG00000036779.13|terminal nucleotidyltransferase 4B	ENSMUST00000119033.8|Tent4b|ENSMUSG00000036779.13|terminal nucleotidyltransferase 4B	ENSMUST00000118952.8|Tent4b|ENSMUSG00000036779.13|terminal nucleotidyltransferase 4B
mm39_v1_chr2_-_50186690_50186813	0.114156	ACCCUGU	ENSMUST00000144143.8|Mmadhc|ENSMUSG00000026766.17|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria	ENSMUST00000102769.11|Mmadhc|ENSMUSG00000026766.17|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria	ENSMUST00000133768.2|Mmadhc|ENSMUSG00000026766.17|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
mm39_v1_chr8_-_85526653_85526912	0.104017	ACCCUGU	ENSMUST00000126806.2|Nfix|ENSMUSG00000001911.17|nuclear factor I/X	ENSMUST00000076715.13|Nfix|ENSMUSG00000001911.17|nuclear factor I/X
mm39_v1_chr1_-_13660027_13660134	0.103691	ACCCUGU	ENSMUST00000027068.11|Tram1|ENSMUSG00000025935.11|translocating chain-associating membrane protein 1
mm39_v1_chr7_-_46658144_46658169	0.101772	ACCCUGU	ENSMUST00000061639.10|Spty2d1|ENSMUSG00000049516.10|SPT2 chromatin protein domain containing 1
mm39_v1_chr14_+_55120875_55120972	0.0859007	ACCCUGU	ENSMUST00000134077.2|Gm20521|ENSMUSG00000092232.2|predicted gene 20521	ENSMUST00000172844.8|Bcl2l2|ENSMUSG00000089682.11|BCL2-like 2	ENSMUST00000133397.4|Bcl2l2|ENSMUSG00000089682.11|BCL2-like 2	ENSMUST00000227108.2|Bcl2l2|ENSMUSG00000089682.11|BCL2-like 2
mm39_v1_chr11_-_118103540_118103574	0.081642	ACCCUGU	ENSMUST00000106302.9|Cyth1|ENSMUSG00000017132.18|cytohesin 1	ENSMUST00000151165.2|Cyth1|ENSMUSG00000017132.18|cytohesin 1
mm39_v1_chr1_-_155848917_155849012	0.0705142	ACCCUGU	ENSMUST00000138762.8|Cep350|ENSMUSG00000033671.19|centrosomal protein 350
mm39_v1_chr1_-_181039509_181039580	0.0607578	ACCCUGU	ENSMUST00000162819.9|Wdr26|ENSMUSG00000038733.15|WD repeat domain 26	ENSMUST00000237749.2|Wdr26|ENSMUSG00000038733.15|WD repeat domain 26
mm39_v1_chr8_-_85414528_85414539	0.0597625	ACCCUGU	ENSMUST00000001975.6|Nacc1|ENSMUSG00000001910.6|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
mm39_v1_chr13_+_81031512_81031543	0.0587007	ACCCUGU	ENSMUST00000099356.10|Arrdc3|ENSMUSG00000074794.11|arrestin domain containing 3
mm39_v1_chr1_-_63153675_63153826	0.0572563	ACCCUGU	ENSMUST00000097718.9|Ino80d|ENSMUSG00000040865.16|INO80 complex subunit D
mm39_v1_chr11_-_20781009_20781056	0.0509467	ACCCUGU	ENSMUST00000047028.9|Lgalsl|ENSMUSG00000042363.15|lectin, galactoside binding-like
mm39_v1_chr7_+_49559859_49559894	0.0439976	ACCCUGU	ENSMUST00000056442.12|Slc6a5|ENSMUSG00000039728.16|solute carrier family 6 (neurotransmitter transporter, glycine), member 5
mm39_v1_chr4_+_31964082_31964263	0.0401632	ACCCUGU	ENSMUST00000037607.11|Map3k7|ENSMUSG00000028284.14|mitogen-activated protein kinase kinase kinase 7	ENSMUST00000080933.13|Map3k7|ENSMUSG00000028284.14|mitogen-activated protein kinase kinase kinase 7	ENSMUST00000108183.8|Map3k7|ENSMUSG00000028284.14|mitogen-activated protein kinase kinase kinase 7	ENSMUST00000108184.3|Map3k7|ENSMUSG00000028284.14|mitogen-activated protein kinase kinase kinase 7
mm39_v1_chr11_-_4544751_4544820	0.0361974	ACCCUGU	ENSMUST00000109943.10|Mtmr3|ENSMUSG00000034354.18|myotubularin related protein 3
mm39_v1_chr10_+_74896383_74896461	0.0316886	ACCCUGU	ENSMUST00000164107.3|Bcr|ENSMUSG00000009681.11|BCR activator of RhoGEF and GTPase
mm39_v1_chr11_-_97078698_97078752	0.0299368	ACCCUGU	ENSMUST00000001479.5|Kpnb1|ENSMUSG00000001440.6|karyopherin (importin) beta 1
mm39_v1_chr14_+_34395845_34395890	0.0288644	ACCCUGU	ENSMUST00000048263.14|Wapl|ENSMUSG00000041408.19|WAPL cohesin release factor
mm39_v1_chrX_-_13712746_13712826	0.0038222	ACCCUGU	ENSMUST00000115436.9|Cask|ENSMUSG00000031012.18|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	ENSMUST00000033321.11|Cask|ENSMUSG00000031012.18|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	ENSMUST00000115438.10|Cask|ENSMUSG00000031012.18|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm39_v1_chr2_-_168443540_168443577	0.00356302	ACCCUGU	ENSMUST00000171689.8|Nfatc2|ENSMUSG00000027544.17|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2	ENSMUST00000137451.2|Nfatc2|ENSMUSG00000027544.17|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2
