mm39_v1_chr2_+_49509288_49509355	5.51	AGCAGCA	ENSMUST00000028102.14|Kif5c|ENSMUSG00000026764.16|kinesin family member 5C
mm39_v1_chr2_-_110781268_110781268	5.27935	AGCAGCA	ENSMUST00000099623.10|Ano3|ENSMUSG00000074968.12|anoctamin 3
mm39_v1_chr14_+_76192449_76192456	5.05493	AGCAGCA	ENSMUST00000050120.4|Kctd4|ENSMUSG00000046523.6|potassium channel tetramerisation domain containing 4
mm39_v1_chr19_+_4761181_4761286	4.95589	AGCAGCA	ENSMUST00000008991.8|Sptbn2|ENSMUSG00000067889.8|spectrin beta, non-erythrocytic 2
mm39_v1_chr9_-_53882530_53882632	4.84228	AGCAGCA	ENSMUST00000048409.14|Elmod1|ENSMUSG00000041986.17|ELMO/CED-12 domain containing 1
mm39_v1_chr10_-_127099183_127099237	4.70608	AGCAGCA	ENSMUST00000099172.5|Kif5a|ENSMUSG00000074657.6|kinesin family member 5A
mm39_v1_chr9_+_111140741_111140826	4.64434	AGCAGCA	ENSMUST00000078626.8|Trank1|ENSMUSG00000062296.9|tetratricopeptide repeat and ankyrin repeat containing 1
mm39_v1_chr6_+_114108190_114108208	4.59812	AGCAGCA	ENSMUST00000032451.9|Slc6a11|ENSMUSG00000030307.9|solute carrier family 6 (neurotransmitter transporter, GABA), member 11
mm39_v1_chr15_-_90934021_90934058	3.98863	AGCAGCA	ENSMUST00000109287.4|Kif21a|ENSMUSG00000022629.18|kinesin family member 21A	ENSMUST00000067205.16|Kif21a|ENSMUSG00000022629.18|kinesin family member 21A	ENSMUST00000088614.13|Kif21a|ENSMUSG00000022629.18|kinesin family member 21A
mm39_v1_chr5_+_16139760_16139827	3.79423	AGCAGCA	ENSMUST00000101581.10|Cacna2d1|ENSMUSG00000040118.16|calcium channel, voltage-dependent, alpha2/delta subunit 1	ENSMUST00000039370.14|Cacna2d1|ENSMUSG00000040118.16|calcium channel, voltage-dependent, alpha2/delta subunit 1	ENSMUST00000199704.5|Cacna2d1|ENSMUSG00000040118.16|calcium channel, voltage-dependent, alpha2/delta subunit 1	ENSMUST00000180204.8|Cacna2d1|ENSMUSG00000040118.16|calcium channel, voltage-dependent, alpha2/delta subunit 1	ENSMUST00000078272.13|Cacna2d1|ENSMUSG00000040118.16|calcium channel, voltage-dependent, alpha2/delta subunit 1	ENSMUST00000115281.7|Cacna2d1|ENSMUSG00000040118.16|calcium channel, voltage-dependent, alpha2/delta subunit 1
mm39_v1_chr11_-_79394904_79394915	3.65063	AGCAGCA	ENSMUST00000164465.3|Omg|ENSMUSG00000049612.11|oligodendrocyte myelin glycoprotein
mm39_v1_chr9_+_32027335_32027432	3.60539	AGCAGCA	ENSMUST00000174641.8|Arhgap32|ENSMUSG00000041444.15|Rho GTPase activating protein 32
mm39_v1_chr17_+_56293492_56293533	3.55798	AGCAGCA	ENSMUST00000011733.9|Fsd1|ENSMUSG00000011589.10|fibronectin type 3 and SPRY domain-containing protein
mm39_v1_chr1_+_66507523_66507606	3.51854	AGCAGCA	ENSMUST00000061620.17|Unc80|ENSMUSG00000055567.19|unc-80, NALCN activator	ENSMUST00000212557.3|Unc80|ENSMUSG00000055567.19|unc-80, NALCN activator
mm39_v1_chr18_-_31580436_31580460	3.43691	AGCAGCA	ENSMUST00000025110.5|Syt4|ENSMUSG00000024261.7|synaptotagmin IV
mm39_v1_chr5_+_117979899_117979922	3.26608	AGCAGCA	ENSMUST00000142742.9|Nos1|ENSMUSG00000029361.19|nitric oxide synthase 1, neuronal
mm39_v1_chrX_-_135769285_135769504	3.24048	AGCAGCA	ENSMUST00000058814.7|Rab9b|ENSMUSG00000043463.7|RAB9B, member RAS oncogene family
mm39_v1_chr10_-_43050516_43050565	3.19909	AGCAGCA	ENSMUST00000040275.9|Sobp|ENSMUSG00000038248.9|sine oculis binding protein
mm39_v1_chr19_-_5148506_5148584	3.18615	AGCAGCA	ENSMUST00000025805.8|Cnih2|ENSMUSG00000024873.8|cornichon family AMPA receptor auxiliary protein 2
mm39_v1_chr6_+_5725639_5725807	3.18323	AGCAGCA	ENSMUST00000115556.8|Dync1i1|ENSMUSG00000029757.17|dynein cytoplasmic 1 intermediate chain 1	ENSMUST00000115555.8|Dync1i1|ENSMUSG00000029757.17|dynein cytoplasmic 1 intermediate chain 1	ENSMUST00000115559.10|Dync1i1|ENSMUSG00000029757.17|dynein cytoplasmic 1 intermediate chain 1
mm39_v1_chr5_+_135052336_135052363	2.94589	AGCAGCA	ENSMUST00000005509.11|Stx1a|ENSMUSG00000007207.11|syntaxin 1A (brain)	ENSMUST00000201008.4|Stx1a|ENSMUSG00000007207.11|syntaxin 1A (brain)
mm39_v1_chr10_-_29411857_29411868	2.94529	AGCAGCA	ENSMUST00000092623.5|Rspo3|ENSMUSG00000019880.11|R-spondin 3
mm39_v1_chr2_-_32737208_32737235	2.86691	AGCAGCA	ENSMUST00000077458.7|Stxbp1|ENSMUSG00000026797.17|syntaxin binding protein 1	ENSMUST00000208840.2|Stxbp1|ENSMUSG00000026797.17|syntaxin binding protein 1
mm39_v1_chr1_-_22031718_22031805	2.86121	AGCAGCA	ENSMUST00000029667.13|Kcnq5|ENSMUSG00000028033.17|potassium voltage-gated channel, subfamily Q, member 5	ENSMUST00000173058.8|Kcnq5|ENSMUSG00000028033.17|potassium voltage-gated channel, subfamily Q, member 5	ENSMUST00000173404.2|Kcnq5|ENSMUSG00000028033.17|potassium voltage-gated channel, subfamily Q, member 5
mm39_v1_chr10_+_112107026_112107026	2.83953	AGCAGCA	ENSMUST00000219301.2|Kcnc2|ENSMUSG00000035681.8|potassium voltage gated channel, Shaw-related subfamily, member 2	ENSMUST00000092175.4|Kcnc2|ENSMUSG00000035681.8|potassium voltage gated channel, Shaw-related subfamily, member 2
mm39_v1_chr1_+_194302123_194302141	2.79702	AGCAGCA	ENSMUST00000027952.12|Plxna2|ENSMUSG00000026640.13|plexin A2
mm39_v1_chr5_+_48140480_48140504	2.7723	AGCAGCA	ENSMUST00000173107.8|Slit2|ENSMUSG00000031558.16|slit guidance ligand 2	ENSMUST00000174313.8|Slit2|ENSMUSG00000031558.16|slit guidance ligand 2	ENSMUST00000174421.8|Slit2|ENSMUSG00000031558.16|slit guidance ligand 2	ENSMUST00000170109.9|Slit2|ENSMUSG00000031558.16|slit guidance ligand 2
mm39_v1_chr4_+_137004793_137004800	2.72514	AGCAGCA	ENSMUST00000045747.5|Wnt4|ENSMUSG00000036856.5|wingless-type MMTV integration site family, member 4
mm39_v1_chr11_-_37126709_37126821	2.72088	AGCAGCA	ENSMUST00000102801.8|Tenm2|ENSMUSG00000049336.17|teneurin transmembrane protein 2
mm39_v1_chr6_-_126621751_126621768	2.70774	AGCAGCA	ENSMUST00000055168.5|Kcna1|ENSMUSG00000047976.5|potassium voltage-gated channel, shaker-related subfamily, member 1
mm39_v1_chr2_-_13016570_13016617	2.61148	AGCAGCA	ENSMUST00000061545.7|C1ql3|ENSMUSG00000049630.7|C1q-like 3
mm39_v1_chr9_+_107812873_107812873	2.61029	AGCAGCA	ENSMUST00000035700.14|Camkv|ENSMUSG00000032936.14|CaM kinase-like vesicle-associated
mm39_v1_chr9_-_54569128_54569154	2.5776	AGCAGCA	ENSMUST00000034822.12|Acsbg1|ENSMUSG00000032281.12|acyl-CoA synthetase bubblegum family member 1
mm39_v1_chr5_+_89034666_89034684	2.57483	AGCAGCA	ENSMUST00000148750.8|Slc4a4|ENSMUSG00000060961.17|solute carrier family 4 (anion exchanger), member 4
mm39_v1_chr6_-_113172340_113172349	2.56989	AGCAGCA	ENSMUST00000162280.2|Lhfpl4|ENSMUSG00000042873.12|lipoma HMGIC fusion partner-like protein 4
mm39_v1_chr2_-_136229849_136229905	2.44548	AGCAGCA	ENSMUST00000035264.9|Pak5|ENSMUSG00000039913.13|p21 (RAC1) activated kinase 5	ENSMUST00000077200.4|Pak5|ENSMUSG00000039913.13|p21 (RAC1) activated kinase 5
mm39_v1_chr2_+_119181703_119181716	2.38335	AGCAGCA	ENSMUST00000028780.4|Chac1|ENSMUSG00000027313.4|ChaC, cation transport regulator 1
mm39_v1_chr9_+_51676625_51676665	2.3704	AGCAGCA	ENSMUST00000065496.12|Arhgap20|ENSMUSG00000053199.14|Rho GTPase activating protein 20
mm39_v1_chr1_-_98023321_98023373	2.34505	AGCAGCA	ENSMUST00000058762.15|Pam|ENSMUSG00000026335.17|peptidylglycine alpha-amidating monooxygenase	ENSMUST00000097625.10|Pam|ENSMUSG00000026335.17|peptidylglycine alpha-amidating monooxygenase
mm39_v1_chr4_-_57301791_57301837	2.33427	AGCAGCA	ENSMUST00000075637.11|Ptpn3|ENSMUSG00000038764.15|protein tyrosine phosphatase, non-receptor type 3
mm39_v1_chr1_-_46893206_46893240	2.32455	AGCAGCA	ENSMUST00000027131.6|Slc39a10|ENSMUSG00000025986.7|solute carrier family 39 (zinc transporter), member 10
mm39_v1_chr12_-_41536430_41536430	2.30849	AGCAGCA	ENSMUST00000043884.6|Lrrn3|ENSMUSG00000036295.6|leucine rich repeat protein 3, neuronal
mm39_v1_chr7_+_109617456_109617481	2.29795	AGCAGCA	ENSMUST00000084731.5|Ipo7|ENSMUSG00000066232.5|importin 7
mm39_v1_chr2_+_65451100_65451170	2.29719	AGCAGCA	ENSMUST00000144254.6|Scn2a|ENSMUSG00000075318.14|sodium channel, voltage-gated, type II, alpha	ENSMUST00000028377.14|Scn2a|ENSMUSG00000075318.14|sodium channel, voltage-gated, type II, alpha
mm39_v1_chr4_+_80828883_80828922	2.25369	AGCAGCA	ENSMUST00000055922.4|Lurap1l|ENSMUSG00000048706.4|leucine rich adaptor protein 1-like
mm39_v1_chr1_+_135693818_135693919	2.21123	AGCAGCA	ENSMUST00000038945.6|Phlda3|ENSMUSG00000041801.6|pleckstrin homology like domain, family A, member 3
mm39_v1_chr5_-_139311371_139311382	2.2008	AGCAGCA	ENSMUST00000110865.2|Adap1|ENSMUSG00000056413.17|ArfGAP with dual PH domains 1
mm39_v1_chr8_+_73325912_73325959	2.14527	AGCAGCA	ENSMUST00000034244.9|Tmem38a|ENSMUSG00000031791.9|transmembrane protein 38A
mm39_v1_chr3_-_26187883_26187883	2.11885	AGCAGCA	ENSMUST00000108308.10|Nlgn1|ENSMUSG00000063887.14|neuroligin 1	ENSMUST00000075054.10|Nlgn1|ENSMUSG00000063887.14|neuroligin 1
mm39_v1_chr8_+_26008773_26008788	2.09663	AGCAGCA	ENSMUST00000084027.13|Fgfr1|ENSMUSG00000031565.19|fibroblast growth factor receptor 1	ENSMUST00000178276.8|Fgfr1|ENSMUSG00000031565.19|fibroblast growth factor receptor 1	ENSMUST00000179592.8|Fgfr1|ENSMUSG00000031565.19|fibroblast growth factor receptor 1
mm39_v1_chr14_-_34096574_34096746	2.0966	AGCAGCA	ENSMUST00000023826.5|Sncg|ENSMUSG00000023064.5|synuclein, gamma
mm39_v1_chr11_+_101066867_101066867	2.06964	AGCAGCA	ENSMUST00000103109.4|Cntnap1|ENSMUSG00000017167.7|contactin associated protein-like 1
mm39_v1_chr7_-_127423641_127423751	2.03364	AGCAGCA	ENSMUST00000106267.5|Stx1b|ENSMUSG00000030806.7|syntaxin 1B
mm39_v1_chr11_-_121279062_121279093	2.01601	AGCAGCA	ENSMUST00000106107.3|Rab40b|ENSMUSG00000025170.14|Rab40B, member RAS oncogene family
mm39_v1_chr12_+_29578354_29578468	2.00938	AGCAGCA	ENSMUST00000218583.2|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like	ENSMUST00000049784.17|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like
mm39_v1_chr2_+_145009625_145009693	1.99856	AGCAGCA	ENSMUST00000110007.8|Slc24a3|ENSMUSG00000063873.11|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
mm39_v1_chr4_+_24973419_24973419	1.99368	AGCAGCA	ENSMUST00000038920.2|Gpr63|ENSMUSG00000040372.3|G protein-coupled receptor 63
mm39_v1_chr11_+_110956980_110957000	1.93284	AGCAGCA	ENSMUST00000042970.3|Kcnj2|ENSMUSG00000041695.3|potassium inwardly-rectifying channel, subfamily J, member 2
mm39_v1_chr4_+_85123654_85123772	1.93063	AGCAGCA	ENSMUST00000030212.15|Sh3gl2|ENSMUSG00000028488.16|SH3-domain GRB2-like 2	ENSMUST00000107189.8|Sh3gl2|ENSMUSG00000028488.16|SH3-domain GRB2-like 2	ENSMUST00000107184.8|Sh3gl2|ENSMUSG00000028488.16|SH3-domain GRB2-like 2
mm39_v1_chr2_+_67948057_67948057	1.92866	AGCAGCA	ENSMUST00000112346.3|B3galt1|ENSMUSG00000034780.7|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm39_v1_chr11_+_80367839_80367910	1.90695	AGCAGCA	ENSMUST00000053413.12|Cdk5r1|ENSMUSG00000048895.14|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	ENSMUST00000147694.2|Cdk5r1|ENSMUSG00000048895.14|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
mm39_v1_chrX_-_94209913_94210145	1.90483	AGCAGCA	ENSMUST00000113873.9|Arhgef9|ENSMUSG00000025656.18|CDC42 guanine nucleotide exchange factor (GEF) 9	ENSMUST00000113876.9|Arhgef9|ENSMUSG00000025656.18|CDC42 guanine nucleotide exchange factor (GEF) 9	ENSMUST00000199920.5|Arhgef9|ENSMUSG00000025656.18|CDC42 guanine nucleotide exchange factor (GEF) 9	ENSMUST00000113885.8|Arhgef9|ENSMUSG00000025656.18|CDC42 guanine nucleotide exchange factor (GEF) 9	ENSMUST00000113883.8|Arhgef9|ENSMUSG00000025656.18|CDC42 guanine nucleotide exchange factor (GEF) 9	ENSMUST00000196012.2|Arhgef9|ENSMUSG00000025656.18|CDC42 guanine nucleotide exchange factor (GEF) 9	ENSMUST00000182001.8|Arhgef9|ENSMUSG00000025656.18|CDC42 guanine nucleotide exchange factor (GEF) 9	ENSMUST00000113878.8|Arhgef9|ENSMUSG00000025656.18|CDC42 guanine nucleotide exchange factor (GEF) 9	ENSMUST00000113882.8|Arhgef9|ENSMUSG00000025656.18|CDC42 guanine nucleotide exchange factor (GEF) 9	ENSMUST00000182562.2|Arhgef9|ENSMUSG00000025656.18|CDC42 guanine nucleotide exchange factor (GEF) 9
mm39_v1_chr18_+_37130860_37130933	1.89443	AGCAGCA	ENSMUST00000115659.6|Pcdha9|ENSMUSG00000103770.2|protocadherin alpha 9
mm39_v1_chr15_-_102044658_102044669	1.88876	AGCAGCA	ENSMUST00000154032.2|Spryd3|ENSMUSG00000036966.16|SPRY domain containing 3
mm39_v1_chr11_-_97913420_97913496	1.87582	AGCAGCA	ENSMUST00000103144.10|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit	ENSMUST00000017552.13|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit	ENSMUST00000092736.11|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit	ENSMUST00000107562.2|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit
mm39_v1_chr8_-_72124359_72124416	1.87114	AGCAGCA	ENSMUST00000177517.8|Unc13a|ENSMUSG00000034799.17|unc-13 homolog A	ENSMUST00000030170.15|Unc13a|ENSMUSG00000034799.17|unc-13 homolog A
mm39_v1_chr2_+_25070749_25070776	1.86281	AGCAGCA	ENSMUST00000104999.4|Nrarp|ENSMUSG00000078202.4|Notch-regulated ankyrin repeat protein
mm39_v1_chr15_-_81845050_81845131	1.85221	AGCAGCA	ENSMUST00000071462.7|Pmm1|ENSMUSG00000022474.16|phosphomannomutase 1	ENSMUST00000023112.12|Pmm1|ENSMUSG00000022474.16|phosphomannomutase 1
mm39_v1_chr5_-_5564730_5564830	1.8456	AGCAGCA	ENSMUST00000115445.8|Cldn12|ENSMUSG00000046798.15|claudin 12	ENSMUST00000179804.8|Cldn12|ENSMUSG00000046798.15|claudin 12	ENSMUST00000125110.2|Cldn12|ENSMUSG00000046798.15|claudin 12	ENSMUST00000115446.8|Cldn12|ENSMUSG00000046798.15|claudin 12
mm39_v1_chr14_-_55150547_55150589	1.84512	AGCAGCA	ENSMUST00000228495.3|Slc22a17|ENSMUSG00000022199.13|solute carrier family 22 (organic cation transporter), member 17	ENSMUST00000228119.3|Slc22a17|ENSMUSG00000022199.13|solute carrier family 22 (organic cation transporter), member 17	ENSMUST00000050772.10|Slc22a17|ENSMUSG00000022199.13|solute carrier family 22 (organic cation transporter), member 17	ENSMUST00000231305.2|Slc22a17|ENSMUSG00000022199.13|solute carrier family 22 (organic cation transporter), member 17
mm39_v1_chr3_+_138447956_138448094	1.84338	AGCAGCA	ENSMUST00000029800.9|Tspan5|ENSMUSG00000028152.11|tetraspanin 5
mm39_v1_chr8_+_89247976_89247999	1.80311	AGCAGCA	ENSMUST00000034086.13|Nkd1|ENSMUSG00000031661.13|naked cuticle 1
mm39_v1_chr4_+_101276474_101276547	1.80079	AGCAGCA	ENSMUST00000102780.8|Ak4|ENSMUSG00000028527.19|adenylate kinase 4	ENSMUST00000106946.8|Ak4|ENSMUSG00000028527.19|adenylate kinase 4	ENSMUST00000106945.8|Ak4|ENSMUSG00000028527.19|adenylate kinase 4
mm39_v1_chr1_-_17168063_17168113	1.7869	AGCAGCA	ENSMUST00000038382.5|Jph1|ENSMUSG00000042686.6|junctophilin 1
mm39_v1_chr18_+_23548455_23548511	1.7746	AGCAGCA	ENSMUST00000115832.4|Dtna|ENSMUSG00000024302.17|dystrobrevin alpha
mm39_v1_chr11_-_102338473_102338508	1.76679	AGCAGCA	ENSMUST00000049057.5|Fam171a2|ENSMUSG00000034685.5|family with sequence similarity 171, member A2
mm39_v1_chr10_+_106306122_106306228	1.76041	AGCAGCA	ENSMUST00000029404.17|Ppfia2|ENSMUSG00000053825.16|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	ENSMUST00000217854.2|Ppfia2|ENSMUSG00000053825.16|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm39_v1_chr16_-_84970617_84970654	1.75802	AGCAGCA	ENSMUST00000226232.2|App|ENSMUSG00000022892.12|amyloid beta (A4) precursor protein	ENSMUST00000227021.2|App|ENSMUSG00000022892.12|amyloid beta (A4) precursor protein	ENSMUST00000005406.12|App|ENSMUSG00000022892.12|amyloid beta (A4) precursor protein	ENSMUST00000227723.2|App|ENSMUSG00000022892.12|amyloid beta (A4) precursor protein
mm39_v1_chr15_-_98661076_98661101	1.75523	AGCAGCA	ENSMUST00000053183.12|Arf3|ENSMUSG00000051853.11|ADP-ribosylation factor 3
mm39_v1_chr3_-_10505113_10505185	1.75112	AGCAGCA	ENSMUST00000029047.12|Snx16|ENSMUSG00000027534.17|sorting nexin 16	ENSMUST00000195822.2|Snx16|ENSMUSG00000027534.17|sorting nexin 16	ENSMUST00000099223.11|Snx16|ENSMUSG00000027534.17|sorting nexin 16
mm39_v1_chr18_+_65713301_65713471	1.74595	AGCAGCA	ENSMUST00000049016.12|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532	ENSMUST00000235493.2|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532	ENSMUST00000183236.2|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532
mm39_v1_chrX_+_55655111_55655177	1.73761	AGCAGCA	ENSMUST00000144068.8|Slc9a6|ENSMUSG00000060681.16|solute carrier family 9 (sodium/hydrogen exchanger), member 6	ENSMUST00000077741.12|Slc9a6|ENSMUSG00000060681.16|solute carrier family 9 (sodium/hydrogen exchanger), member 6	ENSMUST00000114784.4|Slc9a6|ENSMUSG00000060681.16|solute carrier family 9 (sodium/hydrogen exchanger), member 6
mm39_v1_chr9_-_58066484_58066523	1.73497	AGCAGCA	ENSMUST00000041477.15|Islr|ENSMUSG00000037206.16|immunoglobulin superfamily containing leucine-rich repeat
mm39_v1_chr3_+_32871669_32871726	1.73021	AGCAGCA	ENSMUST00000072312.12|Usp13|ENSMUSG00000056900.14|ubiquitin specific peptidase 13 (isopeptidase T-3)	ENSMUST00000108228.8|Usp13|ENSMUSG00000056900.14|ubiquitin specific peptidase 13 (isopeptidase T-3)
mm39_v1_chr3_+_108498595_108498727	1.72538	AGCAGCA	ENSMUST00000051145.15|Wdr47|ENSMUSG00000040389.16|WD repeat domain 47
mm39_v1_chr11_+_54194624_54194670	1.70409	AGCAGCA	ENSMUST00000093106.12|Acsl6|ENSMUSG00000020333.18|acyl-CoA synthetase long-chain family member 6
mm39_v1_chr1_+_153528689_153528771	1.69775	AGCAGCA	ENSMUST00000041776.12|Rgs8|ENSMUSG00000042671.13|regulator of G-protein signaling 8
mm39_v1_chr9_+_22010512_22010583	1.69142	AGCAGCA	ENSMUST00000214601.2|Cnn1|ENSMUSG00000001349.6|calponin 1	ENSMUST00000001384.6|Cnn1|ENSMUSG00000001349.6|calponin 1
mm39_v1_chr5_+_34153328_34153375	1.69141	AGCAGCA	ENSMUST00000056355.9|Nat8l|ENSMUSG00000048142.10|N-acetyltransferase 8-like
mm39_v1_chr17_+_24707711_24707849	1.68819	AGCAGCA	ENSMUST00000024958.9|Caskin1|ENSMUSG00000033597.10|CASK interacting protein 1	ENSMUST00000234717.2|Caskin1|ENSMUSG00000033597.10|CASK interacting protein 1
mm39_v1_chrX_-_156826262_156826290	1.65425	AGCAGCA	ENSMUST00000026750.15|Cnksr2|ENSMUSG00000025658.17|connector enhancer of kinase suppressor of Ras 2	ENSMUST00000112513.2|Cnksr2|ENSMUSG00000025658.17|connector enhancer of kinase suppressor of Ras 2
mm39_v1_chr19_-_5168251_5168350	1.64719	AGCAGCA	ENSMUST00000113728.8|Klc2|ENSMUSG00000024862.17|kinesin light chain 2	ENSMUST00000113727.8|Klc2|ENSMUSG00000024862.17|kinesin light chain 2	ENSMUST00000025798.13|Klc2|ENSMUSG00000024862.17|kinesin light chain 2
mm39_v1_chr3_-_122778052_122778163	1.6471	AGCAGCA	ENSMUST00000199401.2|Usp53|ENSMUSG00000039701.12|ubiquitin specific peptidase 53	ENSMUST00000197314.5|Usp53|ENSMUSG00000039701.12|ubiquitin specific peptidase 53	ENSMUST00000197934.5|Usp53|ENSMUSG00000039701.12|ubiquitin specific peptidase 53	ENSMUST00000090379.7|Usp53|ENSMUSG00000039701.12|ubiquitin specific peptidase 53
mm39_v1_chr14_-_65335479_65335555	1.64657	AGCAGCA	ENSMUST00000225633.2|Extl3|ENSMUSG00000021978.10|exostosin-like glycosyltransferase 3	ENSMUST00000022550.8|Extl3|ENSMUSG00000021978.10|exostosin-like glycosyltransferase 3
mm39_v1_chr9_+_45749869_45749892	1.6423	AGCAGCA	ENSMUST00000078111.11|Bace1|ENSMUSG00000032086.13|beta-site APP cleaving enzyme 1	ENSMUST00000034591.11|Bace1|ENSMUSG00000032086.13|beta-site APP cleaving enzyme 1
mm39_v1_chr9_+_64939695_64939748	1.62365	AGCAGCA	ENSMUST00000034960.14|Dpp8|ENSMUSG00000032393.16|dipeptidylpeptidase 8
mm39_v1_chr4_+_136197066_136197161	1.6159	AGCAGCA	ENSMUST00000170102.8|Luzp1|ENSMUSG00000001089.15|leucine zipper protein 1	ENSMUST00000105849.9|Luzp1|ENSMUSG00000001089.15|leucine zipper protein 1	ENSMUST00000129230.3|Luzp1|ENSMUSG00000001089.15|leucine zipper protein 1
mm39_v1_chr8_-_84184978_84184994	1.59626	AGCAGCA	ENSMUST00000081506.11|Scoc|ENSMUSG00000063253.12|short coiled-coil protein
mm39_v1_chr2_+_14609063_14609117	1.59266	AGCAGCA	ENSMUST00000114723.9|Cacnb2|ENSMUSG00000057914.16|calcium channel, voltage-dependent, beta 2 subunit
mm39_v1_chr19_-_6191440_6191578	1.58064	AGCAGCA	ENSMUST00000025893.7|Arl2|ENSMUSG00000024944.7|ADP-ribosylation factor-like 2
mm39_v1_chr10_+_12966532_12966587	1.55957	AGCAGCA	ENSMUST00000121646.8|Plagl1|ENSMUSG00000019817.19|pleiomorphic adenoma gene-like 1	ENSMUST00000121325.8|Plagl1|ENSMUSG00000019817.19|pleiomorphic adenoma gene-like 1	ENSMUST00000121766.8|Plagl1|ENSMUSG00000019817.19|pleiomorphic adenoma gene-like 1
mm39_v1_chr8_+_14145848_14145931	1.51352	AGCAGCA	ENSMUST00000152652.8|Dlgap2|ENSMUSG00000047495.16|DLG associated protein 2	ENSMUST00000133298.8|Dlgap2|ENSMUSG00000047495.16|DLG associated protein 2
mm39_v1_chr9_+_45049687_45049701	1.51233	AGCAGCA	ENSMUST00000060125.7|Scn4b|ENSMUSG00000046480.7|sodium channel, type IV, beta
mm39_v1_chr14_-_78774201_78774292	1.51074	AGCAGCA	ENSMUST00000123853.9|Akap11|ENSMUSG00000022016.18|A kinase (PRKA) anchor protein 11
mm39_v1_chr11_-_87249837_87249901	1.50775	AGCAGCA	ENSMUST00000055438.5|Ppm1e|ENSMUSG00000046442.5|protein phosphatase 1E (PP2C domain containing)
mm39_v1_chr8_-_47805383_47805401	1.49948	AGCAGCA	ENSMUST00000110367.10|Stox2|ENSMUSG00000038143.17|storkhead box 2
mm39_v1_chr4_+_152423075_152423166	1.46665	AGCAGCA	ENSMUST00000030775.12|Chd5|ENSMUSG00000005045.17|chromodomain helicase DNA binding protein 5	ENSMUST00000164662.8|Chd5|ENSMUSG00000005045.17|chromodomain helicase DNA binding protein 5
mm39_v1_chr2_+_116951855_116951880	1.46653	AGCAGCA	ENSMUST00000028829.13|Spred1|ENSMUSG00000027351.15|sprouty protein with EVH-1 domain 1, related sequence
mm39_v1_chr5_-_93192881_93192925	1.45889	AGCAGCA	ENSMUST00000061328.6|Sowahb|ENSMUSG00000045314.6|sosondowah ankyrin repeat domain family member B
mm39_v1_chr4_-_43523388_43523471	1.45884	AGCAGCA	ENSMUST00000107913.10|Tpm2|ENSMUSG00000028464.17|tropomyosin 2, beta	ENSMUST00000030184.12|Tpm2|ENSMUSG00000028464.17|tropomyosin 2, beta
mm39_v1_chrX_+_94942639_94942639	1.45626	AGCAGCA	ENSMUST00000082183.8|Zc3h12b|ENSMUSG00000035045.18|zinc finger CCCH-type containing 12B
mm39_v1_chr4_-_149391963_149392161	1.44378	AGCAGCA	ENSMUST00000055647.15|Kif1b|ENSMUSG00000063077.16|kinesin family member 1B	ENSMUST00000030806.6|Kif1b|ENSMUSG00000063077.16|kinesin family member 1B	ENSMUST00000238956.2|Kif1b|ENSMUSG00000063077.16|kinesin family member 1B	ENSMUST00000060537.13|Kif1b|ENSMUSG00000063077.16|kinesin family member 1B
mm39_v1_chr9_-_70048766_70048860	1.44323	AGCAGCA	ENSMUST00000034749.16|Fam81a|ENSMUSG00000032224.16|family with sequence similarity 81, member A
mm39_v1_chr11_+_16207705_16207808	1.44186	AGCAGCA	ENSMUST00000109645.9|Vstm2a|ENSMUSG00000048834.17|V-set and transmembrane domain containing 2A	ENSMUST00000109647.3|Vstm2a|ENSMUSG00000048834.17|V-set and transmembrane domain containing 2A
mm39_v1_chr6_-_147165623_147165681	1.43861	AGCAGCA	ENSMUST00000052296.9|Pthlh|ENSMUSG00000048776.9|parathyroid hormone-like peptide	ENSMUST00000204197.2|Pthlh|ENSMUSG00000048776.9|parathyroid hormone-like peptide
mm39_v1_chr9_+_106331041_106331110	1.43648	AGCAGCA	ENSMUST00000024260.14|Pcbp4|ENSMUSG00000023495.14|poly(rC) binding protein 4	ENSMUST00000216379.2|Pcbp4|ENSMUSG00000023495.14|poly(rC) binding protein 4	ENSMUST00000215656.2|Pcbp4|ENSMUSG00000023495.14|poly(rC) binding protein 4	ENSMUST00000214252.2|Pcbp4|ENSMUSG00000023495.14|poly(rC) binding protein 4
mm39_v1_chr10_+_21870565_21870591	1.4179	AGCAGCA	ENSMUST00000020145.12|Sgk1|ENSMUSG00000019970.16|serum/glucocorticoid regulated kinase 1
mm39_v1_chr16_-_22475915_22475928	1.41341	AGCAGCA	ENSMUST00000089925.10|Dgkg|ENSMUSG00000022861.18|diacylglycerol kinase, gamma
mm39_v1_chr8_+_84626715_84626740	1.38196	AGCAGCA	ENSMUST00000141158.8|Adgrl1|ENSMUSG00000013033.17|adhesion G protein-coupled receptor L1
mm39_v1_chr10_-_5019044_5019078	1.37061	AGCAGCA	ENSMUST00000095899.5|Syne1|ENSMUSG00000096054.4|spectrin repeat containing, nuclear envelope 1
mm39_v1_chr16_-_43959559_43959668	1.34525	AGCAGCA	ENSMUST00000063661.13|Atp6v1a|ENSMUSG00000052459.14|ATPase, H+ transporting, lysosomal V1 subunit A	ENSMUST00000114666.9|Atp6v1a|ENSMUSG00000052459.14|ATPase, H+ transporting, lysosomal V1 subunit A
mm39_v1_chr1_+_130659700_130659729	1.33747	AGCAGCA	ENSMUST00000039323.8|AA986860|ENSMUSG00000042510.8|expressed sequence AA986860
mm39_v1_chr14_+_27344385_27344500	1.32855	AGCAGCA	ENSMUST00000210135.2|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2	ENSMUST00000090302.6|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2	ENSMUST00000211087.2|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2
mm39_v1_chr2_+_48704121_48704187	1.31163	AGCAGCA	ENSMUST00000063886.4|Acvr2a|ENSMUSG00000052155.6|activin receptor IIA
mm39_v1_chr1_+_55170390_55170409	1.30869	AGCAGCA	ENSMUST00000159311.8|Mob4|ENSMUSG00000025979.14|MOB family member 4, phocein	ENSMUST00000162364.8|Mob4|ENSMUSG00000025979.14|MOB family member 4, phocein
mm39_v1_chr11_+_58221538_58221563	1.30811	AGCAGCA	ENSMUST00000116376.9|Sh3bp5l|ENSMUSG00000013646.18|SH3 binding domain protein 5 like
mm39_v1_chr3_+_144998233_144998330	1.30515	AGCAGCA	ENSMUST00000029848.5|Col24a1|ENSMUSG00000028197.5|collagen, type XXIV, alpha 1	ENSMUST00000139001.2|Col24a1|ENSMUSG00000028197.5|collagen, type XXIV, alpha 1
mm39_v1_chr1_-_151965876_151965918	1.30238	AGCAGCA	ENSMUST00000044581.14|1700025G04Rik|ENSMUSG00000032666.17|RIKEN cDNA 1700025G04 gene
mm39_v1_chr5_+_150183201_150183232	1.29928	AGCAGCA	ENSMUST00000087204.9|Fry|ENSMUSG00000056602.14|FRY microtubule binding protein
mm39_v1_chr8_-_26275182_26275315	1.29614	AGCAGCA	ENSMUST00000038498.10|Bag4|ENSMUSG00000037316.10|BCL2-associated athanogene 4
mm39_v1_chr5_+_32293145_32293201	1.28747	AGCAGCA	ENSMUST00000031017.11|Fosl2|ENSMUSG00000029135.11|fos-like antigen 2
mm39_v1_chr7_-_141014477_141014517	1.28686	AGCAGCA	ENSMUST00000106007.10|Slc25a22|ENSMUSG00000019082.19|solute carrier family 25 (mitochondrial carrier, glutamate), member 22	ENSMUST00000150026.2|Slc25a22|ENSMUSG00000019082.19|solute carrier family 25 (mitochondrial carrier, glutamate), member 22	ENSMUST00000202840.4|Slc25a22|ENSMUSG00000019082.19|solute carrier family 25 (mitochondrial carrier, glutamate), member 22	ENSMUST00000133206.9|Slc25a22|ENSMUSG00000019082.19|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm39_v1_chr4_+_152358648_152358819	1.28636	AGCAGCA	ENSMUST00000105650.8|Gpr153|ENSMUSG00000042804.14|G protein-coupled receptor 153	ENSMUST00000105651.8|Gpr153|ENSMUSG00000042804.14|G protein-coupled receptor 153
mm39_v1_chr6_-_120470768_120470874	1.28191	AGCAGCA	ENSMUST00000178687.2|Tmem121b|ENSMUSG00000094626.2|transmembrane protein 121B
mm39_v1_chr14_+_84680993_84681009	1.27329	AGCAGCA	ENSMUST00000071370.7|Pcdh17|ENSMUSG00000035566.8|protocadherin 17
mm39_v1_chr19_+_25214322_25214349	1.26432	AGCAGCA	ENSMUST00000049400.15|Kank1|ENSMUSG00000032702.17|KN motif and ankyrin repeat domains 1
mm39_v1_chr7_+_44033520_44033578	1.26234	AGCAGCA	ENSMUST00000118962.8|Syt3|ENSMUSG00000030731.14|synaptotagmin III	ENSMUST00000118831.8|Syt3|ENSMUSG00000030731.14|synaptotagmin III
mm39_v1_chr8_-_105169621_105169679	1.2577	AGCAGCA	ENSMUST00000041769.8|Dync1li2|ENSMUSG00000035770.9|dynein, cytoplasmic 1 light intermediate chain 2
mm39_v1_chr2_-_165315107_165315150	1.254	AGCAGCA	ENSMUST00000029208.15|Slc13a3|ENSMUSG00000018459.16|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3	ENSMUST00000109279.3|Slc13a3|ENSMUSG00000018459.16|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3
mm39_v1_chr11_+_68950533_68950571	1.23577	AGCAGCA	ENSMUST00000051888.4|Borcs6|ENSMUSG00000045176.4|BLOC-1 related complex subunit 6
mm39_v1_chr7_-_64806164_64806318	1.22643	AGCAGCA	ENSMUST00000148459.3|Fam189a1|ENSMUSG00000030518.18|family with sequence similarity 189, member A1	ENSMUST00000119118.8|Fam189a1|ENSMUSG00000030518.18|family with sequence similarity 189, member A1
mm39_v1_chr2_+_69727563_69727591	1.21188	AGCAGCA	ENSMUST00000055758.16|Ubr3|ENSMUSG00000044308.18|ubiquitin protein ligase E3 component n-recognin 3	ENSMUST00000112251.9|Ubr3|ENSMUSG00000044308.18|ubiquitin protein ligase E3 component n-recognin 3
mm39_v1_chr2_-_93787383_93787400	1.20144	AGCAGCA	ENSMUST00000148314.3|Gm13889|ENSMUSG00000087006.4|predicted gene 13889
mm39_v1_chr4_+_136013372_136013425	1.19708	AGCAGCA	ENSMUST00000069195.5|Zfp46|ENSMUSG00000051351.15|zinc finger protein 46	ENSMUST00000130658.2|Zfp46|ENSMUSG00000051351.15|zinc finger protein 46
mm39_v1_chr13_+_54722823_54722828	1.1807	AGCAGCA	ENSMUST00000026988.11|Arl10|ENSMUSG00000025870.11|ADP-ribosylation factor-like 10
mm39_v1_chr14_-_110992533_110992584	1.17922	AGCAGCA	ENSMUST00000078386.4|Slitrk6|ENSMUSG00000045871.6|SLIT and NTRK-like family, member 6
mm39_v1_chr7_-_118183892_118183965	1.17556	AGCAGCA	ENSMUST00000044195.6|Tmc7|ENSMUSG00000042246.6|transmembrane channel-like gene family 7
mm39_v1_chr1_+_187730018_187730031	1.16447	AGCAGCA	ENSMUST00000027906.13|Esrrg|ENSMUSG00000026610.14|estrogen-related receptor gamma
mm39_v1_chr1_-_24139263_24139377	1.16332	AGCAGCA	ENSMUST00000187369.7|Fam135a|ENSMUSG00000026153.16|family with sequence similarity 135, member A	ENSMUST00000187752.7|Fam135a|ENSMUSG00000026153.16|family with sequence similarity 135, member A	ENSMUST00000186999.7|Fam135a|ENSMUSG00000026153.16|family with sequence similarity 135, member A
mm39_v1_chr5_+_43390513_43390580	1.16164	AGCAGCA	ENSMUST00000166713.9|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2	ENSMUST00000169035.8|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2	ENSMUST00000114065.9|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2
mm39_v1_chr2_+_149672708_149672727	1.15539	AGCAGCA	ENSMUST00000109935.8|Syndig1|ENSMUSG00000074736.11|synapse differentiation inducing 1
mm39_v1_chr10_+_58091287_58091361	1.1531	AGCAGCA	ENSMUST00000057659.14|Gcc2|ENSMUSG00000038039.14|GRIP and coiled-coil domain containing 2	ENSMUST00000162041.8|Gcc2|ENSMUSG00000038039.14|GRIP and coiled-coil domain containing 2	ENSMUST00000162860.8|Gcc2|ENSMUSG00000038039.14|GRIP and coiled-coil domain containing 2
mm39_v1_chr13_-_36918424_36918466	1.14265	AGCAGCA	ENSMUST00000037623.15|Nrn1|ENSMUSG00000039114.17|neuritin 1
mm39_v1_chr9_+_108569315_108569392	1.13576	AGCAGCA	ENSMUST00000035220.12|Prkar2a|ENSMUSG00000032601.14|protein kinase, cAMP dependent regulatory, type II alpha
mm39_v1_chr11_-_78427061_78427158	1.12233	AGCAGCA	ENSMUST00000017759.9|Tnfaip1|ENSMUSG00000017615.13|tumor necrosis factor, alpha-induced protein 1 (endothelial)	ENSMUST00000108277.3|Tnfaip1|ENSMUSG00000017615.13|tumor necrosis factor, alpha-induced protein 1 (endothelial)
mm39_v1_chr6_+_29768470_29768541	1.10967	AGCAGCA	ENSMUST00000102995.9|Ahcyl2|ENSMUSG00000029772.18|S-adenosylhomocysteine hydrolase-like 2	ENSMUST00000115242.9|Ahcyl2|ENSMUSG00000029772.18|S-adenosylhomocysteine hydrolase-like 2
mm39_v1_chr6_-_5496261_5496316	1.10504	AGCAGCA	ENSMUST00000203347.3|Pdk4|ENSMUSG00000019577.7|pyruvate dehydrogenase kinase, isoenzyme 4	ENSMUST00000019721.7|Pdk4|ENSMUSG00000019577.7|pyruvate dehydrogenase kinase, isoenzyme 4
mm39_v1_chrX_-_142610371_142610410	1.08555	AGCAGCA	ENSMUST00000087316.6|Capn6|ENSMUSG00000067276.6|calpain 6
mm39_v1_chr11_-_95966477_95966516	1.07764	AGCAGCA	ENSMUST00000090541.12|Atp5g1|ENSMUSG00000006057.16|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9)
mm39_v1_chr1_-_111792599_111792663	1.0739	AGCAGCA	ENSMUST00000035462.7|Dsel|ENSMUSG00000038702.7|dermatan sulfate epimerase-like
mm39_v1_chr15_-_79718423_79718447	1.06227	AGCAGCA	ENSMUST00000109623.8|Cbx6|ENSMUSG00000089715.13|chromobox 6	ENSMUST00000023060.13|Npcd|ENSMUSG00000089837.10|neuronal pentraxin chromo domain	ENSMUST00000089299.6|Npcd|ENSMUSG00000089837.10|neuronal pentraxin chromo domain	ENSMUST00000109625.8|Cbx6|ENSMUSG00000089715.13|chromobox 6
mm39_v1_chr6_+_86055048_86055071	1.05946	AGCAGCA	ENSMUST00000032069.8|Add2|ENSMUSG00000030000.11|adducin 2 (beta)
mm39_v1_chr12_+_79075924_79076002	1.05495	AGCAGCA	ENSMUST00000039928.7|Plekhh1|ENSMUSG00000060716.8|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
mm39_v1_chr6_+_149310471_149310593	1.05028	AGCAGCA	ENSMUST00000086829.11|Bicd1|ENSMUSG00000003452.16|BICD cargo adaptor 1	ENSMUST00000111513.9|Bicd1|ENSMUSG00000003452.16|BICD cargo adaptor 1
mm39_v1_chr19_-_59932079_59932110	1.05009	AGCAGCA	ENSMUST00000171986.8|Rab11fip2|ENSMUSG00000040022.15|RAB11 family interacting protein 2 (class I)
mm39_v1_chr9_+_108685555_108685640	1.04912	AGCAGCA	ENSMUST00000035218.9|Nckipsd|ENSMUSG00000032598.9|NCK interacting protein with SH3 domain	ENSMUST00000195323.2|Nckipsd|ENSMUSG00000032598.9|NCK interacting protein with SH3 domain	ENSMUST00000194819.2|Nckipsd|ENSMUSG00000032598.9|NCK interacting protein with SH3 domain
mm39_v1_chr4_+_105014536_105014552	1.04779	AGCAGCA	ENSMUST00000064139.8|Plpp3|ENSMUSG00000028517.9|phospholipid phosphatase 3
mm39_v1_chr1_-_170042947_170042989	1.04116	AGCAGCA	ENSMUST00000027979.14|Uhmk1|ENSMUSG00000026667.15|U2AF homology motif (UHM) kinase 1	ENSMUST00000123399.2|Uhmk1|ENSMUSG00000026667.15|U2AF homology motif (UHM) kinase 1
mm39_v1_chr17_+_78507669_78507687	1.04051	AGCAGCA	ENSMUST00000112498.3|Crim1|ENSMUSG00000024074.9|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm39_v1_chr3_+_69224189_69224202	1.03516	AGCAGCA	ENSMUST00000029355.9|Ppm1l|ENSMUSG00000027784.11|protein phosphatase 1 (formerly 2C)-like
mm39_v1_chr18_+_3383230_3383271	1.03071	AGCAGCA	ENSMUST00000162301.8|Cul2|ENSMUSG00000024231.16|cullin 2	ENSMUST00000161317.2|Cul2|ENSMUSG00000024231.16|cullin 2
mm39_v1_chr19_-_46561532_46561646	1.02869	AGCAGCA	ENSMUST00000026009.10|Arl3|ENSMUSG00000025035.10|ADP-ribosylation factor-like 3	ENSMUST00000236255.2|Arl3|ENSMUSG00000025035.10|ADP-ribosylation factor-like 3
mm39_v1_chrX_-_156275231_156275283	1.02595	AGCAGCA	ENSMUST00000112529.8|Sms|ENSMUSG00000071708.12|spermine synthase
mm39_v1_chr2_-_167473892_167474015	1.02562	AGCAGCA	ENSMUST00000060645.13|Ube2v1|ENSMUSG00000078923.11|ubiquitin-conjugating enzyme E2 variant 1	ENSMUST00000140216.2|Ube2v1|ENSMUSG00000078923.11|ubiquitin-conjugating enzyme E2 variant 1	ENSMUST00000151365.8|Ube2v1|ENSMUSG00000078923.11|ubiquitin-conjugating enzyme E2 variant 1	ENSMUST00000109207.10|Ube2v1|ENSMUSG00000078923.11|ubiquitin-conjugating enzyme E2 variant 1
mm39_v1_chr8_+_22966736_22966804	1.02317	AGCAGCA	ENSMUST00000067786.9|Slc20a2|ENSMUSG00000037656.10|solute carrier family 20, member 2
mm39_v1_chr1_+_85973585_85973693	1.01878	AGCAGCA	ENSMUST00000027429.11|2810459M11Rik|ENSMUSG00000026227.12|RIKEN cDNA 2810459M11 gene	ENSMUST00000165824.3|2810459M11Rik|ENSMUSG00000026227.12|RIKEN cDNA 2810459M11 gene
mm39_v1_chr6_+_8948608_8948619	1.00958	AGCAGCA	ENSMUST00000160300.2|Nxph1|ENSMUSG00000046178.4|neurexophilin 1
mm39_v1_chr18_+_58011691_58011750	1.00007	AGCAGCA	ENSMUST00000115366.3|Slc12a2|ENSMUSG00000024597.12|solute carrier family 12, member 2
mm39_v1_chr9_-_107486381_107486446	0.994888	AGCAGCA	ENSMUST00000102531.7|Sema3b|ENSMUSG00000057969.16|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B	ENSMUST00000102530.8|Sema3b|ENSMUSG00000057969.16|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B	ENSMUST00000195057.2|Sema3b|ENSMUSG00000057969.16|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B	ENSMUST00000102532.10|Sema3b|ENSMUSG00000057969.16|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
mm39_v1_chr5_+_121535999_121536072	0.99265	AGCAGCA	ENSMUST00000042163.15|Naa25|ENSMUSG00000042719.18|N(alpha)-acetyltransferase 25, NatB auxiliary subunit
mm39_v1_chr4_+_120711974_120712041	0.990235	AGCAGCA	ENSMUST00000071093.9|Rims3|ENSMUSG00000032890.18|regulating synaptic membrane exocytosis 3
mm39_v1_chrX_-_151125415_151125426	0.984477	AGCAGCA	ENSMUST00000044509.7|Tspyl2|ENSMUSG00000041096.14|TSPY-like 2
mm39_v1_chr1_-_14380418_14380463	0.983166	AGCAGCA	ENSMUST00000027066.13|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1	ENSMUST00000168081.9|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1
mm39_v1_chr8_-_88531018_88531067	0.982501	AGCAGCA	ENSMUST00000165770.9|Zfp423|ENSMUSG00000045333.16|zinc finger protein 423
mm39_v1_chr8_-_70929555_70929620	0.982305	AGCAGCA	ENSMUST00000066597.13|Klhl26|ENSMUSG00000055707.14|kelch-like 26	ENSMUST00000210250.2|Klhl26|ENSMUSG00000055707.14|kelch-like 26	ENSMUST00000209415.2|Klhl26|ENSMUSG00000055707.14|kelch-like 26	ENSMUST00000166976.3|Klhl26|ENSMUSG00000055707.14|kelch-like 26
mm39_v1_chr1_-_106687457_106687478	0.961789	AGCAGCA	ENSMUST00000010049.6|Kdsr|ENSMUSG00000009905.6|3-ketodihydrosphingosine reductase
mm39_v1_chr5_+_106024398_106024451	0.955619	AGCAGCA	ENSMUST00000150440.8|Zfp326|ENSMUSG00000029290.13|zinc finger protein 326	ENSMUST00000031227.11|Zfp326|ENSMUSG00000029290.13|zinc finger protein 326
mm39_v1_chr3_+_33853941_33853981	0.953915	AGCAGCA	ENSMUST00000099153.10|Ttc14|ENSMUSG00000027677.18|tetratricopeptide repeat domain 14
mm39_v1_chr14_-_70864666_70864748	0.942303	AGCAGCA	ENSMUST00000022694.17|Dmtn|ENSMUSG00000022099.18|dematin actin binding protein
mm39_v1_chr19_-_18978463_18978483	0.940678	AGCAGCA	ENSMUST00000040153.15|Rorb|ENSMUSG00000036192.16|RAR-related orphan receptor beta	ENSMUST00000112828.8|Rorb|ENSMUSG00000036192.16|RAR-related orphan receptor beta
mm39_v1_chr11_-_76737794_76737871	0.925131	AGCAGCA	ENSMUST00000021201.6|Cpd|ENSMUSG00000020841.6|carboxypeptidase D
mm39_v1_chr3_+_98289755_98289836	0.923288	AGCAGCA	ENSMUST00000056096.15|Zfp697|ENSMUSG00000050064.15|zinc finger protein 697
mm39_v1_chr10_-_25076008_25076076	0.91632	AGCAGCA	ENSMUST00000100012.3|Akap7|ENSMUSG00000039166.17|A kinase (PRKA) anchor protein 7
mm39_v1_chr5_+_13449276_13449350	0.91346	AGCAGCA	ENSMUST00000030714.9|Sema3a|ENSMUSG00000028883.20|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	ENSMUST00000141968.2|Sema3a|ENSMUSG00000028883.20|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm39_v1_chr9_-_48747232_48747262	0.883644	AGCAGCA	ENSMUST00000093852.5|Zbtb16|ENSMUSG00000066687.6|zinc finger and BTB domain containing 16
mm39_v1_chr7_-_44578834_44578942	0.882718	AGCAGCA	ENSMUST00000107857.11|Ap2a1|ENSMUSG00000060279.15|adaptor-related protein complex 2, alpha 1 subunit	ENSMUST00000167930.8|Ap2a1|ENSMUSG00000060279.15|adaptor-related protein complex 2, alpha 1 subunit	ENSMUST00000085399.13|Ap2a1|ENSMUSG00000060279.15|adaptor-related protein complex 2, alpha 1 subunit	ENSMUST00000166972.9|Ap2a1|ENSMUSG00000060279.15|adaptor-related protein complex 2, alpha 1 subunit
mm39_v1_chr7_+_28392263_28392296	0.879297	AGCAGCA	ENSMUST00000039998.11|Fbxo27|ENSMUSG00000037463.15|F-box protein 27
mm39_v1_chrX_+_55391749_55391775	0.878894	AGCAGCA	ENSMUST00000101560.4|Zfp449|ENSMUSG00000073176.5|zinc finger protein 449
mm39_v1_chrX_-_94488394_94488478	0.877324	AGCAGCA	ENSMUST00000084535.6|Amer1|ENSMUSG00000050332.8|APC membrane recruitment 1
mm39_v1_chr10_+_115854118_115854328	0.875431	AGCAGCA	ENSMUST00000063470.11|Ptprr|ENSMUSG00000020151.17|protein tyrosine phosphatase, receptor type, R
mm39_v1_chr8_+_106002772_106002772	0.871381	AGCAGCA	ENSMUST00000014920.8|Nol3|ENSMUSG00000014776.8|nucleolar protein 3 (apoptosis repressor with CARD domain)
mm39_v1_chr11_-_47270201_47270349	0.864495	AGCAGCA	ENSMUST00000077221.6|Sgcd|ENSMUSG00000020354.16|sarcoglycan, delta (dystrophin-associated glycoprotein)
mm39_v1_chr2_-_25209107_25209182	0.86005	AGCAGCA	ENSMUST00000114318.10|Grin1|ENSMUSG00000026959.14|glutamate receptor, ionotropic, NMDA1 (zeta 1)	ENSMUST00000114310.10|Grin1|ENSMUSG00000026959.14|glutamate receptor, ionotropic, NMDA1 (zeta 1)	ENSMUST00000114308.10|Grin1|ENSMUSG00000026959.14|glutamate receptor, ionotropic, NMDA1 (zeta 1)	ENSMUST00000114317.10|Grin1|ENSMUSG00000026959.14|glutamate receptor, ionotropic, NMDA1 (zeta 1)	ENSMUST00000028335.13|Grin1|ENSMUSG00000026959.14|glutamate receptor, ionotropic, NMDA1 (zeta 1)	ENSMUST00000114314.10|Grin1|ENSMUSG00000026959.14|glutamate receptor, ionotropic, NMDA1 (zeta 1)	ENSMUST00000114307.8|Grin1|ENSMUSG00000026959.14|glutamate receptor, ionotropic, NMDA1 (zeta 1)
mm39_v1_chr15_+_25984445_25984459	0.858552	AGCAGCA	ENSMUST00000061875.8|Zfp622|ENSMUSG00000052253.7|zinc finger protein 622
mm39_v1_chr7_-_16348862_16348946	0.853204	AGCAGCA	ENSMUST00000171937.2|Arhgap35|ENSMUSG00000058230.13|Rho GTPase activating protein 35	ENSMUST00000075845.11|Arhgap35|ENSMUSG00000058230.13|Rho GTPase activating protein 35
mm39_v1_chr4_+_14864076_14864147	0.845137	AGCAGCA	ENSMUST00000029875.4|Pip4p2|ENSMUSG00000028221.4|phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2
mm39_v1_chr18_-_38345010_38345106	0.83216	AGCAGCA	ENSMUST00000159405.3|Pcdh1|ENSMUSG00000051375.16|protocadherin 1	ENSMUST00000160721.8|Pcdh1|ENSMUSG00000051375.16|protocadherin 1
mm39_v1_chr16_+_37909363_37909426	0.815109	AGCAGCA	ENSMUST00000023507.13|Gsk3b|ENSMUSG00000022812.15|glycogen synthase kinase 3 beta
mm39_v1_chr11_-_87878301_87878364	0.811861	AGCAGCA	ENSMUST00000020775.9|Dynll2|ENSMUSG00000020483.15|dynein light chain LC8-type 2
mm39_v1_chr8_+_27513819_27513835	0.809775	AGCAGCA	ENSMUST00000033873.9|Erlin2|ENSMUSG00000031483.9|ER lipid raft associated 2	ENSMUST00000211043.2|Erlin2|ENSMUSG00000031483.9|ER lipid raft associated 2
mm39_v1_chr6_+_108760025_108760096	0.791464	AGCAGCA	ENSMUST00000032196.9|Arl8b|ENSMUSG00000030105.9|ADP-ribosylation factor-like 8B
mm39_v1_chr12_-_3359924_3359975	0.784426	AGCAGCA	ENSMUST00000021001.10|Rab10|ENSMUSG00000020671.10|RAB10, member RAS oncogene family
mm39_v1_chr6_+_14901343_14901363	0.782022	AGCAGCA	ENSMUST00000115477.8|Foxp2|ENSMUSG00000029563.17|forkhead box P2
mm39_v1_chr8_+_95807814_95807833	0.780293	AGCAGCA	ENSMUST00000034239.9|Katnb1|ENSMUSG00000031787.9|katanin p80 (WD40-containing) subunit B 1
mm39_v1_chr11_+_90140294_90140312	0.779795	AGCAGCA	ENSMUST00000004050.7|Mmd|ENSMUSG00000003948.18|monocyte to macrophage differentiation-associated
mm39_v1_chr2_+_3119442_3119513	0.775062	AGCAGCA	ENSMUST00000091505.11|Fam171a1|ENSMUSG00000050530.15|family with sequence similarity 171, member A1
mm39_v1_chr15_-_98851566_98851584	0.769503	AGCAGCA	ENSMUST00000097014.7|Tuba1a|ENSMUSG00000072235.7|tubulin, alpha 1A
mm39_v1_chr6_+_40302106_40302106	0.769017	AGCAGCA	ENSMUST00000031977.12|Agk|ENSMUSG00000029916.12|acylglycerol kinase
mm39_v1_chr6_-_94677118_94677157	0.767727	AGCAGCA	ENSMUST00000101126.3|Lrig1|ENSMUSG00000030029.15|leucine-rich repeats and immunoglobulin-like domains 1	ENSMUST00000032105.11|Lrig1|ENSMUSG00000030029.15|leucine-rich repeats and immunoglobulin-like domains 1
mm39_v1_chr15_+_89338116_89338137	0.761812	AGCAGCA	ENSMUST00000023291.6|Mapk8ip2|ENSMUSG00000022619.6|mitogen-activated protein kinase 8 interacting protein 2
mm39_v1_chr14_+_56091454_56091493	0.761306	AGCAGCA	ENSMUST00000227465.2|Nynrin|ENSMUSG00000075592.11|NYN domain and retroviral integrase containing	ENSMUST00000168479.3|Nynrin|ENSMUSG00000075592.11|NYN domain and retroviral integrase containing	ENSMUST00000100529.10|Nynrin|ENSMUSG00000075592.11|NYN domain and retroviral integrase containing
mm39_v1_chr9_-_64160899_64160918	0.756078	AGCAGCA	ENSMUST00000005066.9|Map2k1|ENSMUSG00000004936.9|mitogen-activated protein kinase kinase 1
mm39_v1_chr14_-_45767575_45767640	0.755519	AGCAGCA	ENSMUST00000045905.15|Fermt2|ENSMUSG00000037712.18|fermitin family member 2
mm39_v1_chrX_-_101687813_101687865	0.755347	AGCAGCA	ENSMUST00000052012.14|Phka1|ENSMUSG00000034055.17|phosphorylase kinase alpha 1	ENSMUST00000043596.12|Phka1|ENSMUSG00000034055.17|phosphorylase kinase alpha 1	ENSMUST00000119229.8|Phka1|ENSMUSG00000034055.17|phosphorylase kinase alpha 1	ENSMUST00000122022.8|Phka1|ENSMUSG00000034055.17|phosphorylase kinase alpha 1	ENSMUST00000120270.8|Phka1|ENSMUSG00000034055.17|phosphorylase kinase alpha 1	ENSMUST00000113611.3|Phka1|ENSMUSG00000034055.17|phosphorylase kinase alpha 1
mm39_v1_chrX_-_47123719_47123736	0.737392	AGCAGCA	ENSMUST00000039026.8|Apln|ENSMUSG00000037010.8|apelin
mm39_v1_chr10_-_78427721_78427798	0.734822	AGCAGCA	ENSMUST00000040580.7|Syde1|ENSMUSG00000032714.7|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)
mm39_v1_chr11_-_20062876_20062925	0.734509	AGCAGCA	ENSMUST00000000137.8|Actr2|ENSMUSG00000020152.8|ARP2 actin-related protein 2
mm39_v1_chr16_-_32688640_32688741	0.721147	AGCAGCA	ENSMUST00000089684.10|Rubcn|ENSMUSG00000035629.20|RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein	ENSMUST00000040986.15|Rubcn|ENSMUSG00000035629.20|RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein	ENSMUST00000115105.9|Rubcn|ENSMUSG00000035629.20|RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein
mm39_v1_chr1_+_85721132_85721262	0.720397	AGCAGCA	ENSMUST00000113360.8|Cab39|ENSMUSG00000036707.17|calcium binding protein 39	ENSMUST00000126962.3|Cab39|ENSMUSG00000036707.17|calcium binding protein 39
mm39_v1_chr11_-_115188337_115188406	0.718899	AGCAGCA	ENSMUST00000056153.8|Fads6|ENSMUSG00000044788.11|fatty acid desaturase domain family, member 6
mm39_v1_chr4_+_43875524_43875558	0.714117	AGCAGCA	ENSMUST00000030198.7|Reck|ENSMUSG00000028476.14|reversion-inducing-cysteine-rich protein with kazal motifs
mm39_v1_chr19_+_5497575_5497740	0.708579	AGCAGCA	ENSMUST00000025850.7|Fosl1|ENSMUSG00000024912.7|fos-like antigen 1	ENSMUST00000236774.2|Fosl1|ENSMUSG00000024912.7|fos-like antigen 1
mm39_v1_chr11_-_6425877_6425917	0.706469	AGCAGCA	ENSMUST00000179343.3|Purb|ENSMUSG00000094483.3|purine rich element binding protein B
mm39_v1_chrX_-_20955370_20955468	0.705519	AGCAGCA	ENSMUST00000040667.13|Zfp300|ENSMUSG00000031079.13|zinc finger protein 300
mm39_v1_chr2_+_28531239_28531274	0.705476	AGCAGCA	ENSMUST00000028155.12|Tsc1|ENSMUSG00000026812.17|TSC complex subunit 1	ENSMUST00000113869.8|Tsc1|ENSMUSG00000026812.17|TSC complex subunit 1	ENSMUST00000113867.9|Tsc1|ENSMUSG00000026812.17|TSC complex subunit 1
mm39_v1_chr19_+_55304703_55304799	0.702479	AGCAGCA	ENSMUST00000225529.2|Vti1a|ENSMUSG00000024983.11|vesicle transport through interaction with t-SNAREs 1A	ENSMUST00000223690.2|Vti1a|ENSMUSG00000024983.11|vesicle transport through interaction with t-SNAREs 1A	ENSMUST00000095950.3|Vti1a|ENSMUSG00000024983.11|vesicle transport through interaction with t-SNAREs 1A
mm39_v1_chr8_+_72662437_72662501	0.697553	AGCAGCA	ENSMUST00000110002.8|Zfp882|ENSMUSG00000089857.10|zinc finger protein 882	ENSMUST00000131544.8|Zfp617|ENSMUSG00000066880.16|zinc finger protein 617	ENSMUST00000125802.8|Zfp882|ENSMUSG00000089857.10|zinc finger protein 882
mm39_v1_chr11_-_77380492_77380527	0.697139	AGCAGCA	ENSMUST00000037593.14|Ankrd13b|ENSMUSG00000037907.17|ankyrin repeat domain 13b	ENSMUST00000092892.10|Ankrd13b|ENSMUSG00000037907.17|ankyrin repeat domain 13b
mm39_v1_chr12_-_101879375_101879526	0.694961	AGCAGCA	ENSMUST00000177536.8|Trip11|ENSMUSG00000021188.15|thyroid hormone receptor interactor 11	ENSMUST00000176728.2|Trip11|ENSMUSG00000021188.15|thyroid hormone receptor interactor 11	ENSMUST00000021605.14|Trip11|ENSMUSG00000021188.15|thyroid hormone receptor interactor 11
mm39_v1_chr8_-_89770790_89770823	0.694228	AGCAGCA	ENSMUST00000034090.8|Sall1|ENSMUSG00000031665.8|spalt like transcription factor 1
mm39_v1_chr7_+_67602565_67602576	0.689065	AGCAGCA	ENSMUST00000005671.10|Igf1r|ENSMUSG00000005533.11|insulin-like growth factor I receptor
mm39_v1_chr4_-_11322106_11322147	0.686176	AGCAGCA	ENSMUST00000084892.12|Dpy19l4|ENSMUSG00000045205.17|dpy-19-like 4 (C. elegans)	ENSMUST00000128024.8|Dpy19l4|ENSMUSG00000045205.17|dpy-19-like 4 (C. elegans)
mm39_v1_chr1_-_134883645_134883693	0.686066	AGCAGCA	ENSMUST00000045665.13|Ppp1r12b|ENSMUSG00000073557.13|protein phosphatase 1, regulatory subunit 12B	ENSMUST00000086444.6|Ppp1r12b|ENSMUSG00000073557.13|protein phosphatase 1, regulatory subunit 12B	ENSMUST00000112163.2|Ppp1r12b|ENSMUSG00000073557.13|protein phosphatase 1, regulatory subunit 12B
mm39_v1_chr9_+_109760528_109760554	0.677125	AGCAGCA	ENSMUST00000035055.15|Map4|ENSMUSG00000032479.16|microtubule-associated protein 4
mm39_v1_chrX_+_150127171_150127237	0.670689	AGCAGCA	ENSMUST00000073364.6|Fam120c|ENSMUSG00000025262.9|family with sequence similarity 120, member C
mm39_v1_chr2_-_131194754_131194806	0.669661	AGCAGCA	ENSMUST00000059372.11|Rnf24|ENSMUSG00000048911.16|ring finger protein 24
mm39_v1_chr11_+_83855245_83855304	0.664874	AGCAGCA	ENSMUST00000049714.15|Synrg|ENSMUSG00000034940.16|synergin, gamma	ENSMUST00000092834.12|Synrg|ENSMUSG00000034940.16|synergin, gamma	ENSMUST00000183714.8|Synrg|ENSMUSG00000034940.16|synergin, gamma	ENSMUST00000183456.8|Synrg|ENSMUSG00000034940.16|synergin, gamma
mm39_v1_chr5_+_31652079_31652141	0.662541	AGCAGCA	ENSMUST00000076949.13|Gpn1|ENSMUSG00000064037.14|GPN-loop GTPase 1	ENSMUST00000202394.4|Gpn1|ENSMUSG00000064037.14|GPN-loop GTPase 1
mm39_v1_chr4_+_28813125_28813139	0.658849	AGCAGCA	ENSMUST00000080934.11|Epha7|ENSMUSG00000028289.13|Eph receptor A7	ENSMUST00000029964.12|Epha7|ENSMUSG00000028289.13|Eph receptor A7
mm39_v1_chr11_-_23615862_23615959	0.656552	AGCAGCA	ENSMUST00000020523.4|Pex13|ENSMUSG00000020283.6|peroxisomal biogenesis factor 13
mm39_v1_chr8_+_107662352_107662410	0.634403	AGCAGCA	ENSMUST00000212524.2|Sntb2|ENSMUSG00000041308.7|syntrophin, basic 2	ENSMUST00000047425.5|Sntb2|ENSMUSG00000041308.7|syntrophin, basic 2
mm39_v1_chr6_+_85408953_85408991	0.631675	AGCAGCA	ENSMUST00000045693.8|Smyd5|ENSMUSG00000033706.14|SET and MYND domain containing 5
mm39_v1_chr14_+_66534478_66534532	0.630685	AGCAGCA	ENSMUST00000022623.13|Trim35|ENSMUSG00000022043.20|tripartite motif-containing 35
mm39_v1_chr13_+_49835576_49835648	0.618249	AGCAGCA	ENSMUST00000165316.8|Iars|ENSMUSG00000037851.14|isoleucine-tRNA synthetase	ENSMUST00000047363.14|Iars|ENSMUSG00000037851.14|isoleucine-tRNA synthetase
mm39_v1_chr5_+_30437579_30437678	0.610579	AGCAGCA	ENSMUST00000145167.9|Selenoi|ENSMUSG00000075703.17|selenoprotein I
mm39_v1_chr9_-_63665216_63665276	0.61004	AGCAGCA	ENSMUST00000034973.10|Smad3|ENSMUSG00000032402.13|SMAD family member 3
mm39_v1_chr12_+_111132779_111132832	0.608238	AGCAGCA	ENSMUST00000117269.8|Traf3|ENSMUSG00000021277.17|TNF receptor-associated factor 3
mm39_v1_chr7_+_109721230_109721342	0.60276	AGCAGCA	ENSMUST00000033326.10|Wee1|ENSMUSG00000031016.10|WEE 1 homolog 1 (S. pombe)
mm39_v1_chr11_-_102446947_102447025	0.600871	AGCAGCA	ENSMUST00000143842.2|Gpatch8|ENSMUSG00000034621.15|G patch domain containing 8
mm39_v1_chr7_-_121306476_121306685	0.59722	AGCAGCA	ENSMUST00000046929.7|Usp31|ENSMUSG00000063317.8|ubiquitin specific peptidase 31
mm39_v1_chr3_+_137624280_137624347	0.594746	AGCAGCA	ENSMUST00000168345.6|Lamtor3|ENSMUSG00000091512.6|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3	ENSMUST00000197817.2|Lamtor3|ENSMUSG00000091512.6|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3
mm39_v1_chr2_+_151384403_151384423	0.593271	AGCAGCA	ENSMUST00000044011.12|Fkbp1a|ENSMUSG00000032966.15|FK506 binding protein 1a
mm39_v1_chr7_-_19338349_19338418	0.586413	AGCAGCA	ENSMUST00000086041.7|Clasrp|ENSMUSG00000061028.8|CLK4-associating serine/arginine rich protein
mm39_v1_chr5_+_138083345_138083410	0.583809	AGCAGCA	ENSMUST00000019660.11|Zkscan1|ENSMUSG00000029729.13|zinc finger with KRAB and SCAN domains 1	ENSMUST00000066617.12|Zkscan1|ENSMUSG00000029729.13|zinc finger with KRAB and SCAN domains 1	ENSMUST00000110963.8|Zkscan1|ENSMUSG00000029729.13|zinc finger with KRAB and SCAN domains 1
mm39_v1_chrX_-_87159237_87159281	0.582509	AGCAGCA	ENSMUST00000113966.8|Il1rapl1|ENSMUSG00000052372.11|interleukin 1 receptor accessory protein-like 1	ENSMUST00000113964.2|Il1rapl1|ENSMUSG00000052372.11|interleukin 1 receptor accessory protein-like 1
mm39_v1_chr5_-_69499014_69499028	0.575578	AGCAGCA	ENSMUST00000087231.4|Kctd8|ENSMUSG00000037653.8|potassium channel tetramerisation domain containing 8	ENSMUST00000054095.6|Kctd8|ENSMUSG00000037653.8|potassium channel tetramerisation domain containing 8
mm39_v1_chr11_+_77384234_77384397	0.574672	AGCAGCA	ENSMUST00000037285.10|Git1|ENSMUSG00000011877.14|GIT ArfGAP 1	ENSMUST00000100812.4|Git1|ENSMUSG00000011877.14|GIT ArfGAP 1
mm39_v1_chr9_-_112016834_112016930	0.574628	AGCAGCA	ENSMUST00000111872.9|Arpp21|ENSMUSG00000032503.19|cyclic AMP-regulated phosphoprotein, 21	ENSMUST00000164754.9|Arpp21|ENSMUSG00000032503.19|cyclic AMP-regulated phosphoprotein, 21
mm39_v1_chr10_-_112764879_112764919	0.574572	AGCAGCA	ENSMUST00000099276.4|Atxn7l3b|ENSMUSG00000074748.4|ataxin 7-like 3B
mm39_v1_chr10_-_83173708_83173746	0.573891	AGCAGCA	ENSMUST00000039956.6|Slc41a2|ENSMUSG00000034591.6|solute carrier family 41, member 2
mm39_v1_chr6_+_56691875_56691937	0.573442	AGCAGCA	ENSMUST00000031805.11|Avl9|ENSMUSG00000029787.11|AVL9 cell migration associated	ENSMUST00000177249.3|Avl9|ENSMUSG00000029787.11|AVL9 cell migration associated
mm39_v1_chr8_-_8711211_8711250	0.572959	AGCAGCA	ENSMUST00000001319.15|Efnb2|ENSMUSG00000001300.17|ephrin B2
mm39_v1_chrX_+_100683662_100683714	0.569322	AGCAGCA	ENSMUST00000119299.8|Ogt|ENSMUSG00000034160.14|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	ENSMUST00000044475.5|Ogt|ENSMUSG00000034160.14|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm39_v1_chr7_-_126165530_126165588	0.56566	AGCAGCA	ENSMUST00000180459.3|Eif3c|ENSMUSG00000030738.12|eukaryotic translation initiation factor 3, subunit C	ENSMUST00000032992.7|Eif3c|ENSMUSG00000030738.12|eukaryotic translation initiation factor 3, subunit C
mm39_v1_chr9_+_92339422_92339443	0.563725	AGCAGCA	ENSMUST00000034941.9|Plscr4|ENSMUSG00000032377.9|phospholipid scramblase 4
mm39_v1_chr3_-_122413361_122413372	0.558667	AGCAGCA	ENSMUST00000239148.2|Fnbp1l|ENSMUSG00000039735.17|formin binding protein 1-like	ENSMUST00000162409.8|Fnbp1l|ENSMUSG00000039735.17|formin binding protein 1-like	ENSMUST00000162947.3|Fnbp1l|ENSMUSG00000039735.17|formin binding protein 1-like
mm39_v1_chr3_+_138231935_138231940	0.556249	AGCAGCA	ENSMUST00000029803.12|Eif4e|ENSMUSG00000028156.13|eukaryotic translation initiation factor 4E
mm39_v1_chr11_+_70591299_70591476	0.554878	AGCAGCA	ENSMUST00000152618.9|Kif1c|ENSMUSG00000020821.18|kinesin family member 1C	ENSMUST00000102554.8|Kif1c|ENSMUSG00000020821.18|kinesin family member 1C	ENSMUST00000094499.11|Kif1c|ENSMUSG00000020821.18|kinesin family member 1C	ENSMUST00000072187.12|Kif1c|ENSMUSG00000020821.18|kinesin family member 1C	ENSMUST00000137119.3|Kif1c|ENSMUSG00000020821.18|kinesin family member 1C
mm39_v1_chr12_-_108241392_108241476	0.553038	AGCAGCA	ENSMUST00000136175.3|Ccdc85c|ENSMUSG00000084883.3|coiled-coil domain containing 85C
mm39_v1_chr10_+_59538299_59538450	0.547059	AGCAGCA	ENSMUST00000165563.8|Micu1|ENSMUSG00000020111.16|mitochondrial calcium uptake 1	ENSMUST00000020311.13|Micu1|ENSMUSG00000020111.16|mitochondrial calcium uptake 1	ENSMUST00000179709.8|Micu1|ENSMUSG00000020111.16|mitochondrial calcium uptake 1	ENSMUST00000092508.12|Micu1|ENSMUSG00000020111.16|mitochondrial calcium uptake 1
mm39_v1_chr14_-_50020788_50020848	0.546767	AGCAGCA	ENSMUST00000118129.2|Armh4|ENSMUSG00000036242.16|armadillo-like helical domain containing 4	ENSMUST00000036972.14|Armh4|ENSMUSG00000036242.16|armadillo-like helical domain containing 4
mm39_v1_chr4_-_136563154_136563299	0.543953	AGCAGCA	ENSMUST00000105846.9|Ephb2|ENSMUSG00000028664.15|Eph receptor B2	ENSMUST00000059287.14|Ephb2|ENSMUSG00000028664.15|Eph receptor B2	ENSMUST00000105845.9|Ephb2|ENSMUSG00000028664.15|Eph receptor B2
mm39_v1_chr3_-_104419128_104419250	0.543683	AGCAGCA	ENSMUST00000199070.5|Lrig2|ENSMUSG00000032913.14|leucine-rich repeats and immunoglobulin-like domains 2	ENSMUST00000046316.11|Lrig2|ENSMUSG00000032913.14|leucine-rich repeats and immunoglobulin-like domains 2	ENSMUST00000198332.2|Lrig2|ENSMUSG00000032913.14|leucine-rich repeats and immunoglobulin-like domains 2
mm39_v1_chrX_-_13712746_13712826	0.54235	AGCAGCA	ENSMUST00000115436.9|Cask|ENSMUSG00000031012.18|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	ENSMUST00000033321.11|Cask|ENSMUSG00000031012.18|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	ENSMUST00000115438.10|Cask|ENSMUSG00000031012.18|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm39_v1_chr7_+_130467486_130467542	0.538176	AGCAGCA	ENSMUST00000120441.8|Plekha1|ENSMUSG00000040268.18|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
mm39_v1_chr4_-_45084564_45084610	0.536143	AGCAGCA	ENSMUST00000052236.13|Fbxo10|ENSMUSG00000048232.13|F-box protein 10
mm39_v1_chr13_-_53531391_53531433	0.53215	AGCAGCA	ENSMUST00000021920.8|Sptlc1|ENSMUSG00000021468.9|serine palmitoyltransferase, long chain base subunit 1
mm39_v1_chr18_-_21433186_21433226	0.530722	AGCAGCA	ENSMUST00000049260.7|Garem1|ENSMUSG00000042680.9|GRB2 associated regulator of MAPK1 subtype 1
mm39_v1_chr4_+_125384481_125384495	0.524286	AGCAGCA	ENSMUST00000030676.8|Grik3|ENSMUSG00000001985.10|glutamate receptor, ionotropic, kainate 3
mm39_v1_chr11_-_119937896_119937955	0.521231	AGCAGCA	ENSMUST00000064307.10|Aatk|ENSMUSG00000025375.16|apoptosis-associated tyrosine kinase
mm39_v1_chr14_+_55120875_55120972	0.51654	AGCAGCA	ENSMUST00000134077.2|Gm20521|ENSMUSG00000092232.2|predicted gene 20521	ENSMUST00000172844.8|Bcl2l2|ENSMUSG00000089682.11|BCL2-like 2	ENSMUST00000133397.4|Bcl2l2|ENSMUSG00000089682.11|BCL2-like 2	ENSMUST00000227108.2|Bcl2l2|ENSMUSG00000089682.11|BCL2-like 2
mm39_v1_chr2_+_69553141_69553189	0.512761	AGCAGCA	ENSMUST00000090858.10|Ppig|ENSMUSG00000042133.17|peptidyl-prolyl isomerase G (cyclophilin G)
mm39_v1_chr17_+_45834344_45834378	0.512043	AGCAGCA	ENSMUST00000113547.2|Tcte1|ENSMUSG00000023949.8|t-complex-associated testis expressed 1
mm39_v1_chr4_-_9643636_9643717	0.511021	AGCAGCA	ENSMUST00000108333.8|Asph|ENSMUSG00000028207.19|aspartate-beta-hydroxylase	ENSMUST00000108334.8|Asph|ENSMUSG00000028207.19|aspartate-beta-hydroxylase	ENSMUST00000108335.8|Asph|ENSMUSG00000028207.19|aspartate-beta-hydroxylase	ENSMUST00000152526.8|Asph|ENSMUSG00000028207.19|aspartate-beta-hydroxylase	ENSMUST00000103004.10|Asph|ENSMUSG00000028207.19|aspartate-beta-hydroxylase
mm39_v1_chr8_-_65302657_65302675	0.511003	AGCAGCA	ENSMUST00000034017.9|Klhl2|ENSMUSG00000031605.9|kelch-like 2, Mayven
mm39_v1_chr1_-_71454041_71454074	0.508802	AGCAGCA	ENSMUST00000087268.7|Abca12|ENSMUSG00000050296.15|ATP-binding cassette, sub-family A (ABC1), member 12
mm39_v1_chr7_+_92390811_92390923	0.506612	AGCAGCA	ENSMUST00000032879.15|Rab30|ENSMUSG00000030643.15|RAB30, member RAS oncogene family
mm39_v1_chrX_-_110606766_110606834	0.504344	AGCAGCA	ENSMUST00000113422.9|Hdx|ENSMUSG00000034551.13|highly divergent homeobox	ENSMUST00000038472.7|Hdx|ENSMUSG00000034551.13|highly divergent homeobox
mm39_v1_chr4_-_22488296_22488366	0.504152	AGCAGCA	ENSMUST00000178174.3|Pou3f2|ENSMUSG00000095139.3|POU domain, class 3, transcription factor 2
mm39_v1_chr5_-_53370761_53370826	0.495584	AGCAGCA	ENSMUST00000031090.8|Sel1l3|ENSMUSG00000029189.11|sel-1 suppressor of lin-12-like 3 (C. elegans)
mm39_v1_chr6_-_56774622_56774741	0.495206	AGCAGCA	ENSMUST00000114323.8|Kbtbd2|ENSMUSG00000059486.12|kelch repeat and BTB (POZ) domain containing 2
mm39_v1_chr9_-_79625800_79625854	0.493359	AGCAGCA	ENSMUST00000071750.13|Col12a1|ENSMUSG00000032332.18|collagen, type XII, alpha 1
mm39_v1_chr5_+_113873864_113873864	0.489871	AGCAGCA	ENSMUST00000065698.7|Ficd|ENSMUSG00000053334.7|FIC domain containing
mm39_v1_chr3_+_114697710_114697747	0.48649	AGCAGCA	ENSMUST00000081752.13|Olfm3|ENSMUSG00000027965.16|olfactomedin 3
mm39_v1_chr19_+_46750016_46750057	0.483076	AGCAGCA	ENSMUST00000099373.12|Cnnm2|ENSMUSG00000064105.14|cyclin M2	ENSMUST00000077666.6|Cnnm2|ENSMUSG00000064105.14|cyclin M2
mm39_v1_chr6_+_125192514_125192554	0.474826	AGCAGCA	ENSMUST00000032487.14|Vamp1|ENSMUSG00000030337.17|vesicle-associated membrane protein 1	ENSMUST00000100942.9|Vamp1|ENSMUSG00000030337.17|vesicle-associated membrane protein 1	ENSMUST00000063588.11|Vamp1|ENSMUSG00000030337.17|vesicle-associated membrane protein 1
mm39_v1_chr11_-_45835737_45835787	0.460963	AGCAGCA	ENSMUST00000129820.8|Lsm11|ENSMUSG00000044847.14|U7 snRNP-specific Sm-like protein LSM11
mm39_v1_chr2_+_164647002_164647029	0.45371	AGCAGCA	ENSMUST00000052107.5|Zswim3|ENSMUSG00000045822.5|zinc finger SWIM-type containing 3
mm39_v1_chr2_-_17735847_17735898	0.451885	AGCAGCA	ENSMUST00000028080.12|Nebl|ENSMUSG00000053702.17|nebulette
mm39_v1_chrX_+_149981074_149981136	0.44969	AGCAGCA	ENSMUST00000184730.8|Wnk3|ENSMUSG00000041245.14|WNK lysine deficient protein kinase 3	ENSMUST00000184392.8|Wnk3|ENSMUSG00000041245.14|WNK lysine deficient protein kinase 3	ENSMUST00000096285.5|Wnk3|ENSMUSG00000041245.14|WNK lysine deficient protein kinase 3
mm39_v1_chr5_-_148336711_148336722	0.439151	AGCAGCA	ENSMUST00000048116.15|Slc7a1|ENSMUSG00000041313.15|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
mm39_v1_chr6_-_24664959_24665039	0.436951	AGCAGCA	ENSMUST00000041737.8|Wasl|ENSMUSG00000029684.15|WASP like actin nucleation promoting factor	ENSMUST00000031695.15|Wasl|ENSMUSG00000029684.15|WASP like actin nucleation promoting factor
mm39_v1_chr15_+_102898966_102899039	0.435733	AGCAGCA	ENSMUST00000001703.8|Hoxc8|ENSMUSG00000001657.8|homeobox C8
mm39_v1_chr18_+_65022035_65022105	0.428418	AGCAGCA	ENSMUST00000224385.3|Nedd4l|ENSMUSG00000024589.19|neural precursor cell expressed, developmentally down-regulated gene 4-like	ENSMUST00000163516.9|Nedd4l|ENSMUSG00000024589.19|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm39_v1_chr16_-_8610165_8610190	0.422388	AGCAGCA	ENSMUST00000160405.8|Usp7|ENSMUSG00000022710.18|ubiquitin specific peptidase 7
mm39_v1_chr19_-_4993060_4993155	0.419516	AGCAGCA	ENSMUST00000133504.2|Peli3|ENSMUSG00000024901.16|pellino 3	ENSMUST00000133254.2|Peli3|ENSMUSG00000024901.16|pellino 3	ENSMUST00000120475.8|Peli3|ENSMUSG00000024901.16|pellino 3	ENSMUST00000025834.15|Peli3|ENSMUSG00000024901.16|pellino 3
mm39_v1_chr6_-_85351524_85351546	0.418167	AGCAGCA	ENSMUST00000060837.10|Rab11fip5|ENSMUSG00000051343.12|RAB11 family interacting protein 5 (class I)
mm39_v1_chr10_+_20024724_20024760	0.415405	AGCAGCA	ENSMUST00000116259.5|Map7|ENSMUSG00000019996.18|microtubule-associated protein 7	ENSMUST00000214231.2|Map7|ENSMUSG00000019996.18|microtubule-associated protein 7
mm39_v1_chr18_-_38734389_38734468	0.405722	AGCAGCA	ENSMUST00000025295.8|Spry4|ENSMUSG00000024427.8|sprouty RTK signaling antagonist 4
mm39_v1_chrX_-_103024847_103024893	0.404319	AGCAGCA	ENSMUST00000121153.8|Rlim|ENSMUSG00000056537.12|ring finger protein, LIM domain interacting	ENSMUST00000070705.6|Rlim|ENSMUSG00000056537.12|ring finger protein, LIM domain interacting
mm39_v1_chr8_+_27532583_27532616	0.400136	AGCAGCA	ENSMUST00000033875.10|Plpbp|ENSMUSG00000031485.16|pyridoxal phosphate binding protein	ENSMUST00000209525.2|Plpbp|ENSMUSG00000031485.16|pyridoxal phosphate binding protein
mm39_v1_chr7_+_121666388_121666438	0.399523	AGCAGCA	ENSMUST00000033158.6|Ubfd1|ENSMUSG00000030870.13|ubiquitin family domain containing 1
mm39_v1_chr1_+_62742444_62742511	0.395567	AGCAGCA	ENSMUST00000102822.9|Nrp2|ENSMUSG00000025969.16|neuropilin 2	ENSMUST00000075144.12|Nrp2|ENSMUSG00000025969.16|neuropilin 2
mm39_v1_chr19_-_31742427_31742480	0.393281	AGCAGCA	ENSMUST00000065067.14|Prkg1|ENSMUSG00000052920.17|protein kinase, cGMP-dependent, type I
mm39_v1_chr5_+_117495337_117495421	0.392204	AGCAGCA	ENSMUST00000031309.16|Wsb2|ENSMUSG00000029364.16|WD repeat and SOCS box-containing 2
mm39_v1_chr11_+_55095144_55095211	0.382053	AGCAGCA	ENSMUST00000108872.9|Slc36a1|ENSMUSG00000020261.16|solute carrier family 36 (proton/amino acid symporter), member 1	ENSMUST00000147506.8|Slc36a1|ENSMUSG00000020261.16|solute carrier family 36 (proton/amino acid symporter), member 1	ENSMUST00000020499.14|Slc36a1|ENSMUSG00000020261.16|solute carrier family 36 (proton/amino acid symporter), member 1
mm39_v1_chr1_+_166828982_166828999	0.3813	AGCAGCA	ENSMUST00000165874.8|Fam78b|ENSMUSG00000060568.15|family with sequence similarity 78, member B	ENSMUST00000190081.7|Fam78b|ENSMUSG00000060568.15|family with sequence similarity 78, member B
mm39_v1_chr2_+_156038562_156038695	0.38086	AGCAGCA	ENSMUST00000037401.10|Phf20|ENSMUSG00000038116.17|PHD finger protein 20
mm39_v1_chr9_-_95393909_95394049	0.378884	AGCAGCA	ENSMUST00000190019.2|U2surp|ENSMUSG00000032407.15|U2 snRNP-associated SURP domain containing	ENSMUST00000185515.7|U2surp|ENSMUSG00000032407.15|U2 snRNP-associated SURP domain containing	ENSMUST00000217176.2|U2surp|ENSMUSG00000032407.15|U2 snRNP-associated SURP domain containing	ENSMUST00000079659.12|U2surp|ENSMUSG00000032407.15|U2 snRNP-associated SURP domain containing	ENSMUST00000078374.13|U2surp|ENSMUSG00000032407.15|U2 snRNP-associated SURP domain containing
mm39_v1_chr8_-_110464345_110464418	0.376458	AGCAGCA	ENSMUST00000212605.2|Atxn1l|ENSMUSG00000069895.5|ataxin 1-like	ENSMUST00000093162.4|Atxn1l|ENSMUSG00000069895.5|ataxin 1-like	ENSMUST00000212726.2|Atxn1l|ENSMUSG00000069895.5|ataxin 1-like
mm39_v1_chr7_+_121732258_121732313	0.375771	AGCAGCA	ENSMUST00000033156.5|Dctn5|ENSMUSG00000030868.7|dynactin 5
mm39_v1_chr8_+_117884711_117884876	0.375571	AGCAGCA	ENSMUST00000064488.11|Gan|ENSMUSG00000052557.12|giant axonal neuropathy	ENSMUST00000162997.3|Gan|ENSMUSG00000052557.12|giant axonal neuropathy
mm39_v1_chr9_+_68561042_68561068	0.37534	AGCAGCA	ENSMUST00000034766.14|Rora|ENSMUSG00000032238.18|RAR-related orphan receptor alpha
mm39_v1_chr9_+_18203421_18203542	0.367871	AGCAGCA	ENSMUST00000001825.9|Chordc1|ENSMUSG00000001774.9|cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1
mm39_v1_chr14_+_5894220_5894254	0.367243	AGCAGCA	ENSMUST00000063750.8|Rarb|ENSMUSG00000017491.10|retinoic acid receptor, beta
mm39_v1_chr11_-_120715351_120715406	0.353635	AGCAGCA	ENSMUST00000055655.9|Fasn|ENSMUSG00000025153.10|fatty acid synthase
mm39_v1_chr19_+_42158995_42159096	0.353182	AGCAGCA	ENSMUST00000169536.8|Zfyve27|ENSMUSG00000018820.14|zinc finger, FYVE domain containing 27	ENSMUST00000099443.11|Zfyve27|ENSMUSG00000018820.14|zinc finger, FYVE domain containing 27
mm39_v1_chr5_+_67417908_67418054	0.34965	AGCAGCA	ENSMUST00000037918.12|Tmem33|ENSMUSG00000037720.17|transmembrane protein 33	ENSMUST00000162543.8|Tmem33|ENSMUSG00000037720.17|transmembrane protein 33	ENSMUST00000161233.8|Tmem33|ENSMUSG00000037720.17|transmembrane protein 33	ENSMUST00000160352.8|Tmem33|ENSMUSG00000037720.17|transmembrane protein 33
mm39_v1_chr4_+_17853452_17853474	0.349577	AGCAGCA	ENSMUST00000029881.10|Mmp16|ENSMUSG00000028226.16|matrix metallopeptidase 16
mm39_v1_chr5_+_150876072_150876179	0.349075	AGCAGCA	ENSMUST00000078856.8|Kl|ENSMUSG00000058488.8|klotho
mm39_v1_chr2_+_30282266_30282317	0.3478	AGCAGCA	ENSMUST00000028209.15|Dolpp1|ENSMUSG00000026856.15|dolichyl pyrophosphate phosphatase 1
mm39_v1_chr6_-_91388345_91388355	0.347044	AGCAGCA	ENSMUST00000032180.7|Wnt7a|ENSMUSG00000030093.8|wingless-type MMTV integration site family, member 7A
mm39_v1_chr4_-_129566505_129566567	0.342968	AGCAGCA	ENSMUST00000102590.11|Kpna6|ENSMUSG00000003731.14|karyopherin (importin) alpha 6
mm39_v1_chr15_-_100449839_100449892	0.342871	AGCAGCA	ENSMUST00000009877.8|Tfcp2|ENSMUSG00000009733.10|transcription factor CP2	ENSMUST00000229696.2|Tfcp2|ENSMUSG00000009733.10|transcription factor CP2
mm39_v1_chr11_-_4798985_4799194	0.338854	AGCAGCA	ENSMUST00000056290.13|Nf2|ENSMUSG00000009073.17|neurofibromin 2	ENSMUST00000172305.2|Nf2|ENSMUSG00000009073.17|neurofibromin 2	ENSMUST00000164190.8|Nf2|ENSMUSG00000009073.17|neurofibromin 2
mm39_v1_chr19_+_28967875_28967902	0.33861	AGCAGCA	ENSMUST00000224599.2|Cdc37l1|ENSMUSG00000024780.8|cell division cycle 37-like 1	ENSMUST00000050148.5|Cdc37l1|ENSMUSG00000024780.8|cell division cycle 37-like 1
mm39_v1_chr2_-_38955452_38955513	0.338137	AGCAGCA	ENSMUST00000112850.9|Golga1|ENSMUSG00000026754.17|golgi autoantigen, golgin subfamily a, 1
mm39_v1_chr4_-_19708910_19709004	0.337176	AGCAGCA	ENSMUST00000108246.9|Wwp1|ENSMUSG00000041058.16|WW domain containing E3 ubiquitin protein ligase 1
mm39_v1_chr15_-_100393369_100393369	0.330307	AGCAGCA	ENSMUST00000061457.7|Csrnp2|ENSMUSG00000044636.7|cysteine-serine-rich nuclear protein 2
mm39_v1_chr3_-_107667499_107667572	0.328869	AGCAGCA	ENSMUST00000153114.2|Csf1|ENSMUSG00000014599.11|colony stimulating factor 1 (macrophage)	ENSMUST00000118593.8|Csf1|ENSMUSG00000014599.11|colony stimulating factor 1 (macrophage)	ENSMUST00000120243.8|Csf1|ENSMUSG00000014599.11|colony stimulating factor 1 (macrophage)
mm39_v1_chr16_-_45830575_45830587	0.327414	AGCAGCA	ENSMUST00000130481.2|Plcxd2|ENSMUSG00000087141.2|phosphatidylinositol-specific phospholipase C, X domain containing 2
mm39_v1_chr11_+_108811168_108811184	0.326638	AGCAGCA	ENSMUST00000052915.14|Axin2|ENSMUSG00000000142.16|axin 2
mm39_v1_chr17_-_46342739_46342789	0.325304	AGCAGCA	ENSMUST00000024747.14|Vegfa|ENSMUSG00000023951.19|vascular endothelial growth factor A
mm39_v1_chr9_-_50639230_50639308	0.324931	AGCAGCA	ENSMUST00000118707.2|Dixdc1|ENSMUSG00000032064.18|DIX domain containing 1	ENSMUST00000034566.15|Dixdc1|ENSMUSG00000032064.18|DIX domain containing 1
mm39_v1_chr14_-_14389372_14389457	0.323492	AGCAGCA	ENSMUST00000023924.4|Rpp14|ENSMUSG00000023156.5|ribonuclease P 14 subunit
mm39_v1_chr9_+_102382949_102382949	0.321183	AGCAGCA	ENSMUST00000039390.6|Ky|ENSMUSG00000035606.9|kyphoscoliosis peptidase
mm39_v1_chr19_-_37184692_37184907	0.319833	AGCAGCA	ENSMUST00000132580.8|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3	ENSMUST00000079754.11|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3	ENSMUST00000136286.8|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3	ENSMUST00000126188.8|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3	ENSMUST00000126781.2|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3
mm39_v1_chr10_+_128247598_128247627	0.318468	AGCAGCA	ENSMUST00000096386.13|Rnf41|ENSMUSG00000025373.15|ring finger protein 41
mm39_v1_chr14_+_34542053_34542108	0.317063	AGCAGCA	ENSMUST00000043349.7|Grid1|ENSMUSG00000041078.8|glutamate receptor, ionotropic, delta 1
mm39_v1_chr1_-_37580084_37580128	0.316308	AGCAGCA	ENSMUST00000151952.8|Mgat4a|ENSMUSG00000026110.16|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm39_v1_chr19_+_42078859_42078939	0.315424	AGCAGCA	ENSMUST00000235932.2|Pi4k2a|ENSMUSG00000025178.10|phosphatidylinositol 4-kinase type 2 alpha	ENSMUST00000066778.6|Pi4k2a|ENSMUSG00000025178.10|phosphatidylinositol 4-kinase type 2 alpha
mm39_v1_chr1_-_171910324_171910362	0.315061	AGCAGCA	ENSMUST00000003550.11|Ncstn|ENSMUSG00000003458.13|nicastrin
mm39_v1_chr9_+_83430363_83430393	0.314147	AGCAGCA	ENSMUST00000188241.7|Sh3bgrl2|ENSMUSG00000032261.17|SH3 domain binding glutamic acid-rich protein like 2	ENSMUST00000113215.10|Sh3bgrl2|ENSMUSG00000032261.17|SH3 domain binding glutamic acid-rich protein like 2
mm39_v1_chr2_+_119119218_119119252	0.313105	AGCAGCA	ENSMUST00000037280.5|Vps18|ENSMUSG00000034216.13|VPS18 CORVET/HOPS core subunit
mm39_v1_chr2_+_125876566_125876600	0.31193	AGCAGCA	ENSMUST00000064794.14|Fgf7|ENSMUSG00000027208.15|fibroblast growth factor 7
mm39_v1_chr5_-_32984453_32984453	0.301096	AGCAGCA	ENSMUST00000144673.3|Gm20671|ENSMUSG00000093574.2|predicted gene 20671
mm39_v1_chr4_-_147989137_147989167	0.300792	AGCAGCA	ENSMUST00000105716.9|Mfn2|ENSMUSG00000029020.14|mitofusin 2	ENSMUST00000105715.8|Mfn2|ENSMUSG00000029020.14|mitofusin 2	ENSMUST00000105714.8|Mfn2|ENSMUSG00000029020.14|mitofusin 2	ENSMUST00000030884.10|Mfn2|ENSMUSG00000029020.14|mitofusin 2
mm39_v1_chr7_+_3341597_3341647	0.293667	AGCAGCA	ENSMUST00000164553.8|Myadm|ENSMUSG00000068566.14|myeloid-associated differentiation marker
mm39_v1_chr14_-_33169099_33169138	0.291762	AGCAGCA	ENSMUST00000111944.10|Mapk8|ENSMUSG00000021936.15|mitogen-activated protein kinase 8	ENSMUST00000022504.12|Mapk8|ENSMUSG00000021936.15|mitogen-activated protein kinase 8	ENSMUST00000111945.9|Mapk8|ENSMUSG00000021936.15|mitogen-activated protein kinase 8
mm39_v1_chrX_-_92875712_92875807	0.291419	AGCAGCA	ENSMUST00000045748.7|Pdk3|ENSMUSG00000035232.9|pyruvate dehydrogenase kinase, isoenzyme 3
mm39_v1_chr9_+_65305787_65305862	0.290757	AGCAGCA	ENSMUST00000085453.6|Rasl12|ENSMUSG00000041696.15|RAS-like, family 12	ENSMUST00000165682.9|Rasl12|ENSMUSG00000041696.15|RAS-like, family 12
mm39_v1_chr11_-_108234743_108234782	0.283019	AGCAGCA	ENSMUST00000059595.11|Prkca|ENSMUSG00000050965.15|protein kinase C, alpha
mm39_v1_chr2_-_181240921_181241028	0.279909	AGCAGCA	ENSMUST00000060173.9|Samd10|ENSMUSG00000038605.12|sterile alpha motif domain containing 10
mm39_v1_chr15_-_77840856_77840927	0.278076	AGCAGCA	ENSMUST00000117725.2|Foxred2|ENSMUSG00000016552.14|FAD-dependent oxidoreductase domain containing 2	ENSMUST00000016696.13|Foxred2|ENSMUSG00000016552.14|FAD-dependent oxidoreductase domain containing 2
mm39_v1_chr2_+_120970888_120970946	0.273478	AGCAGCA	ENSMUST00000028702.10|Adal|ENSMUSG00000027259.16|adenosine deaminase-like	ENSMUST00000110665.8|Adal|ENSMUSG00000027259.16|adenosine deaminase-like
mm39_v1_chr5_+_118114826_118114868	0.270353	AGCAGCA	ENSMUST00000035579.10|Fbxo21|ENSMUSG00000032898.10|F-box protein 21
mm39_v1_chr12_+_110452222_110452293	0.265932	AGCAGCA	ENSMUST00000084985.11|Ppp2r5c|ENSMUSG00000017843.15|protein phosphatase 2, regulatory subunit B', gamma	ENSMUST00000221074.2|Ppp2r5c|ENSMUSG00000017843.15|protein phosphatase 2, regulatory subunit B', gamma
mm39_v1_chrX_+_74557905_74557946	0.260177	AGCAGCA	ENSMUST00000114070.10|Vbp1|ENSMUSG00000031197.12|von Hippel-Lindau binding protein 1	ENSMUST00000033540.6|Vbp1|ENSMUSG00000031197.12|von Hippel-Lindau binding protein 1
mm39_v1_chr9_-_113537277_113537327	0.253948	AGCAGCA	ENSMUST00000111861.4|Pdcd6ip|ENSMUSG00000032504.16|programmed cell death 6 interacting protein	ENSMUST00000035086.13|Pdcd6ip|ENSMUSG00000032504.16|programmed cell death 6 interacting protein
mm39_v1_chr13_+_41403317_41403340	0.248485	AGCAGCA	ENSMUST00000165561.4|Smim13|ENSMUSG00000091264.4|small integral membrane protein 13
mm39_v1_chr4_+_21848039_21848077	0.245118	AGCAGCA	ENSMUST00000098238.9|Pnisr|ENSMUSG00000028248.16|PNN interacting serine/arginine-rich	ENSMUST00000108229.2|Pnisr|ENSMUSG00000028248.16|PNN interacting serine/arginine-rich
mm39_v1_chr8_-_64659004_64659045	0.235012	AGCAGCA	ENSMUST00000066166.6|Tll1|ENSMUSG00000053626.6|tolloid-like
mm39_v1_chr4_+_127137577_127137648	0.23274	AGCAGCA	ENSMUST00000142029.2|Smim12|ENSMUSG00000042380.9|small integral membrane protein 12
mm39_v1_chr7_-_26878260_26878321	0.230678	AGCAGCA	ENSMUST00000093040.13|Rab4b|ENSMUSG00000053291.16|RAB4B, member RAS oncogene family
mm39_v1_chr10_-_126896024_126896075	0.227883	AGCAGCA	ENSMUST00000040307.6|Marchf9|ENSMUSG00000040502.6|membrane associated ring-CH-type finger 9
mm39_v1_chr11_+_49737558_49737585	0.226631	AGCAGCA	ENSMUST00000109179.9|Mapk9|ENSMUSG00000020366.19|mitogen-activated protein kinase 9	ENSMUST00000178543.8|Mapk9|ENSMUSG00000020366.19|mitogen-activated protein kinase 9	ENSMUST00000164643.8|Mapk9|ENSMUSG00000020366.19|mitogen-activated protein kinase 9	ENSMUST00000020634.14|Mapk9|ENSMUSG00000020366.19|mitogen-activated protein kinase 9
mm39_v1_chr10_-_85752765_85752870	0.222002	AGCAGCA	ENSMUST00000037646.9|Prdm4|ENSMUSG00000035529.11|PR domain containing 4	ENSMUST00000220032.2|Prdm4|ENSMUSG00000035529.11|PR domain containing 4
mm39_v1_chr9_+_47441471_47441671	0.220528	AGCAGCA	ENSMUST00000114548.8|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000152459.8|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000143026.9|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000085909.9|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000114547.8|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000239368.2|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000214542.2|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000034581.4|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1
mm39_v1_chr19_+_22425565_22425596	0.218188	AGCAGCA	ENSMUST00000037901.14|Trpm3|ENSMUSG00000052387.17|transient receptor potential cation channel, subfamily M, member 3
mm39_v1_chr6_+_124908439_124908502	0.215758	AGCAGCA	ENSMUST00000032214.14|Mlf2|ENSMUSG00000030120.15|myeloid leukemia factor 2
mm39_v1_chr12_-_98541293_98541386	0.214358	AGCAGCA	ENSMUST00000110113.3|Kcnk10|ENSMUSG00000033854.11|potassium channel, subfamily K, member 10
mm39_v1_chr18_+_80250007_80250082	0.213995	AGCAGCA	ENSMUST00000145963.9|Txnl4a|ENSMUSG00000057130.13|thioredoxin-like 4A	ENSMUST00000125127.8|Gm16286|ENSMUSG00000024571.16|predicted gene 16286	ENSMUST00000025464.8|Txnl4a|ENSMUSG00000057130.13|thioredoxin-like 4A	ENSMUST00000025463.14|Gm16286|ENSMUSG00000024571.16|predicted gene 16286
mm39_v1_chr5_-_76452365_76452398	0.213878	AGCAGCA	ENSMUST00000075159.5|Clock|ENSMUSG00000029238.12|circadian locomotor output cycles kaput
mm39_v1_chr11_-_74615496_74615530	0.213399	AGCAGCA	ENSMUST00000021091.15|Pafah1b1|ENSMUSG00000020745.16|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
mm39_v1_chrX_-_162741548_162741594	0.210173	AGCAGCA	ENSMUST00000147928.8|Zrsr2|ENSMUSG00000031370.13|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	ENSMUST00000112289.9|Zrsr2|ENSMUSG00000031370.13|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	ENSMUST00000090840.10|Zrsr2|ENSMUSG00000031370.13|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2
mm39_v1_chr3_-_90340830_90340841	0.209073	AGCAGCA	ENSMUST00000029542.12|Ints3|ENSMUSG00000027933.12|integrator complex subunit 3
mm39_v1_chr1_-_170695328_170695354	0.207787	AGCAGCA	ENSMUST00000027974.7|Atf6|ENSMUSG00000026663.7|activating transcription factor 6
mm39_v1_chr7_-_24672083_24672179	0.206451	AGCAGCA	ENSMUST00000076961.9|Rabac1|ENSMUSG00000003380.12|Rab acceptor 1 (prenylated)
mm39_v1_chr1_+_57416752_57416848	0.206371	AGCAGCA	ENSMUST00000042734.3|1700066M21Rik|ENSMUSG00000038323.4|RIKEN cDNA 1700066M21 gene
mm39_v1_chr4_-_116024788_116024804	0.205411	AGCAGCA	ENSMUST00000030465.10|Tspan1|ENSMUSG00000028699.10|tetraspanin 1	ENSMUST00000143426.2|Tspan1|ENSMUSG00000028699.10|tetraspanin 1
mm39_v1_chr6_-_118174679_118174704	0.202883	AGCAGCA	ENSMUST00000088790.9|Ret|ENSMUSG00000030110.14|ret proto-oncogene
mm39_v1_chrX_+_105070907_105070929	0.199496	AGCAGCA	ENSMUST00000055941.7|Atp7a|ENSMUSG00000033792.13|ATPase, Cu++ transporting, alpha polypeptide
mm39_v1_chr10_-_18110682_18110755	0.193784	AGCAGCA	ENSMUST00000052648.9|Ccdc28a|ENSMUSG00000059554.13|coiled-coil domain containing 28A	ENSMUST00000080860.13|Ccdc28a|ENSMUSG00000059554.13|coiled-coil domain containing 28A	ENSMUST00000173243.8|Ccdc28a|ENSMUSG00000059554.13|coiled-coil domain containing 28A
mm39_v1_chr15_-_4025190_4025253	0.193072	AGCAGCA	ENSMUST00000046633.10|AW549877|ENSMUSG00000041935.11|expressed sequence AW549877
mm39_v1_chr7_-_16550656_16550658	0.19022	AGCAGCA	ENSMUST00000061390.9|Fkrp|ENSMUSG00000048920.9|fukutin related protein
mm39_v1_chr11_-_101117237_101117289	0.188757	AGCAGCA	ENSMUST00000100417.3|Ezh1|ENSMUSG00000006920.15|enhancer of zeste 1 polycomb repressive complex 2 subunit	ENSMUST00000107285.8|Ezh1|ENSMUSG00000006920.15|enhancer of zeste 1 polycomb repressive complex 2 subunit	ENSMUST00000107284.8|Ezh1|ENSMUSG00000006920.15|enhancer of zeste 1 polycomb repressive complex 2 subunit
mm39_v1_chr8_+_3565377_3565397	0.186259	AGCAGCA	ENSMUST00000111070.4|Pnpla6|ENSMUSG00000004565.16|patatin-like phospholipase domain containing 6	ENSMUST00000004681.14|Pnpla6|ENSMUSG00000004565.16|patatin-like phospholipase domain containing 6	ENSMUST00000208310.2|Pnpla6|ENSMUSG00000004565.16|patatin-like phospholipase domain containing 6
mm39_v1_chr15_+_58744494_58744545	0.185622	AGCAGCA	ENSMUST00000036937.9|Trmt12|ENSMUSG00000037085.9|tRNA methyltransferase 12
mm39_v1_chr4_-_133728168_133728229	0.18495	AGCAGCA	ENSMUST00000105887.8|Dhdds|ENSMUSG00000012117.14|dehydrodolichyl diphosphate synthase	ENSMUST00000012262.12|Dhdds|ENSMUSG00000012117.14|dehydrodolichyl diphosphate synthase	ENSMUST00000144668.8|Dhdds|ENSMUSG00000012117.14|dehydrodolichyl diphosphate synthase	ENSMUST00000105889.4|Dhdds|ENSMUSG00000012117.14|dehydrodolichyl diphosphate synthase
mm39_v1_chr4_-_141518202_141518252	0.183024	AGCAGCA	ENSMUST00000038014.11|Dnajc16|ENSMUSG00000040697.11|DnaJ heat shock protein family (Hsp40) member C16	ENSMUST00000153880.2|Dnajc16|ENSMUSG00000040697.11|DnaJ heat shock protein family (Hsp40) member C16
mm39_v1_chr18_+_62457275_62457317	0.181349	AGCAGCA	ENSMUST00000027560.8|Htr4|ENSMUSG00000026322.10|5 hydroxytryptamine (serotonin) receptor 4
mm39_v1_chr9_-_65734826_65734859	0.179648	AGCAGCA	ENSMUST00000159109.2|Zfp609|ENSMUSG00000040524.10|zinc finger protein 609
mm39_v1_chr17_-_56525879_56525922	0.176856	AGCAGCA	ENSMUST00000038794.6|Dpp9|ENSMUSG00000001229.10|dipeptidylpeptidase 9
mm39_v1_chr1_+_64729603_64729625	0.173277	AGCAGCA	ENSMUST00000114077.8|Ccnyl1|ENSMUSG00000070871.11|cyclin Y-like 1
mm39_v1_chr5_-_3852857_3852925	0.165547	AGCAGCA	ENSMUST00000043551.11|Ankib1|ENSMUSG00000040351.12|ankyrin repeat and IBR domain containing 1
mm39_v1_chr12_+_16944896_16944904	0.162835	AGCAGCA	ENSMUST00000020904.8|Rock2|ENSMUSG00000020580.11|Rho-associated coiled-coil containing protein kinase 2
mm39_v1_chr3_-_31023547_31023573	0.162261	AGCAGCA	ENSMUST00000064718.12|Phc3|ENSMUSG00000037652.16|polyhomeotic 3	ENSMUST00000177992.8|Phc3|ENSMUSG00000037652.16|polyhomeotic 3	ENSMUST00000129817.9|Phc3|ENSMUSG00000037652.16|polyhomeotic 3	ENSMUST00000168645.8|Phc3|ENSMUSG00000037652.16|polyhomeotic 3	ENSMUST00000108255.8|Phc3|ENSMUSG00000037652.16|polyhomeotic 3	ENSMUST00000099163.5|Phc3|ENSMUSG00000037652.16|polyhomeotic 3
mm39_v1_chr9_+_104930438_104930502	0.160442	AGCAGCA	ENSMUST00000149243.8|Mrpl3|ENSMUSG00000032563.17|mitochondrial ribosomal protein L3	ENSMUST00000035177.15|Mrpl3|ENSMUSG00000032563.17|mitochondrial ribosomal protein L3	ENSMUST00000214036.2|Mrpl3|ENSMUSG00000032563.17|mitochondrial ribosomal protein L3
mm39_v1_chr11_+_75570085_75570167	0.160176	AGCAGCA	ENSMUST00000017920.14|Crk|ENSMUSG00000017776.16|v-crk avian sarcoma virus CT10 oncogene homolog	ENSMUST00000108426.8|Crk|ENSMUSG00000017776.16|v-crk avian sarcoma virus CT10 oncogene homolog	ENSMUST00000108425.8|Crk|ENSMUSG00000017776.16|v-crk avian sarcoma virus CT10 oncogene homolog	ENSMUST00000093115.4|Crk|ENSMUSG00000017776.16|v-crk avian sarcoma virus CT10 oncogene homolog
mm39_v1_chr17_-_46956054_46956086	0.159873	AGCAGCA	ENSMUST00000003642.7|Klc4|ENSMUSG00000003546.11|kinesin light chain 4
mm39_v1_chr18_+_10725532_10725564	0.159207	AGCAGCA	ENSMUST00000052838.11|Mib1|ENSMUSG00000024294.15|mindbomb E3 ubiquitin protein ligase 1
mm39_v1_chr1_+_127701901_127701975	0.158817	AGCAGCA	ENSMUST00000112570.2|Ccnt2|ENSMUSG00000026349.15|cyclin T2	ENSMUST00000027587.15|Ccnt2|ENSMUSG00000026349.15|cyclin T2
mm39_v1_chr19_-_46384158_46384199	0.158792	AGCAGCA	ENSMUST00000237742.2|Actr1a|ENSMUSG00000025228.6|ARP1 actin-related protein 1A, centractin alpha	ENSMUST00000040270.6|Actr1a|ENSMUSG00000025228.6|ARP1 actin-related protein 1A, centractin alpha
mm39_v1_chr8_+_110595216_110595243	0.157948	AGCAGCA	ENSMUST00000179721.8|Phlpp2|ENSMUSG00000031732.13|PH domain and leucine rich repeat protein phosphatase 2	ENSMUST00000034175.5|Phlpp2|ENSMUSG00000031732.13|PH domain and leucine rich repeat protein phosphatase 2
mm39_v1_chr2_+_132105056_132105190	0.155854	AGCAGCA	ENSMUST00000110158.8|Cds2|ENSMUSG00000058793.15|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	ENSMUST00000103181.11|Cds2|ENSMUSG00000058793.15|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
mm39_v1_chr18_+_34675366_34675388	0.154731	AGCAGCA	ENSMUST00000012426.3|Wnt8a|ENSMUSG00000012282.3|wingless-type MMTV integration site family, member 8A
mm39_v1_chr11_-_70300836_70300869	0.154413	AGCAGCA	ENSMUST00000019065.10|Pelp1|ENSMUSG00000018921.12|proline, glutamic acid and leucine rich protein 1	ENSMUST00000135148.2|Pelp1|ENSMUSG00000018921.12|proline, glutamic acid and leucine rich protein 1
mm39_v1_chr6_-_122463422_122463515	0.154211	AGCAGCA	ENSMUST00000068242.9|Rimklb|ENSMUSG00000040649.16|ribosomal modification protein rimK-like family member B
mm39_v1_chr8_+_41692755_41692815	0.15198	AGCAGCA	ENSMUST00000210862.2|Pcm1|ENSMUSG00000031592.11|pericentriolar material 1	ENSMUST00000045218.9|Pcm1|ENSMUSG00000031592.11|pericentriolar material 1	ENSMUST00000211247.2|Pcm1|ENSMUSG00000031592.11|pericentriolar material 1
mm39_v1_chr11_-_116089866_116089916	0.146784	AGCAGCA	ENSMUST00000066587.12|Acox1|ENSMUSG00000020777.17|acyl-Coenzyme A oxidase 1, palmitoyl
mm39_v1_chrX_+_72386220_72386237	0.146627	AGCAGCA	ENSMUST00000114499.8|Zfp275|ENSMUSG00000031365.14|zinc finger protein 275	ENSMUST00000033731.4|Zfp275|ENSMUSG00000031365.14|zinc finger protein 275
mm39_v1_chr2_+_144369638_144369695	0.145085	AGCAGCA	ENSMUST00000028914.9|Polr3f|ENSMUSG00000027427.14|polymerase (RNA) III (DNA directed) polypeptide F	ENSMUST00000110017.3|Polr3f|ENSMUSG00000027427.14|polymerase (RNA) III (DNA directed) polypeptide F
mm39_v1_chr7_-_29898236_29898269	0.144027	AGCAGCA	ENSMUST00000001845.13|Capns1|ENSMUSG00000001794.14|calpain, small subunit 1
mm39_v1_chr1_+_70764874_70765082	0.14245	AGCAGCA	ENSMUST00000053922.12|Vwc2l|ENSMUSG00000045648.16|von Willebrand factor C domain-containing protein 2-like	ENSMUST00000161937.2|Vwc2l|ENSMUSG00000045648.16|von Willebrand factor C domain-containing protein 2-like	ENSMUST00000162182.2|Vwc2l|ENSMUSG00000045648.16|von Willebrand factor C domain-containing protein 2-like
mm39_v1_chr2_-_152256947_152256947	0.141753	AGCAGCA	ENSMUST00000099207.5|Zcchc3|ENSMUSG00000074682.5|zinc finger, CCHC domain containing 3
mm39_v1_chr2_+_90677499_90677638	0.134968	AGCAGCA	ENSMUST00000136872.8|Mtch2|ENSMUSG00000027282.18|mitochondrial carrier 2	ENSMUST00000150232.8|Mtch2|ENSMUSG00000027282.18|mitochondrial carrier 2	ENSMUST00000111467.4|Mtch2|ENSMUSG00000027282.18|mitochondrial carrier 2
mm39_v1_chr7_+_140436870_140436870	0.13401	AGCAGCA	ENSMUST00000026558.7|Ric8a|ENSMUSG00000025485.14|RIC8 guanine nucleotide exchange factor A
mm39_v1_chr19_+_45352173_45352274	0.132437	AGCAGCA	ENSMUST00000223764.2|Btrc|ENSMUSG00000025217.16|beta-transducin repeat containing protein	ENSMUST00000065601.13|Btrc|ENSMUSG00000025217.16|beta-transducin repeat containing protein	ENSMUST00000224102.2|Btrc|ENSMUSG00000025217.16|beta-transducin repeat containing protein	ENSMUST00000111936.4|Btrc|ENSMUSG00000025217.16|beta-transducin repeat containing protein
mm39_v1_chr6_+_145692439_145692504	0.132043	AGCAGCA	ENSMUST00000111704.8|Rassf8|ENSMUSG00000030259.13|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
mm39_v1_chr4_+_55350043_55350083	0.129841	AGCAGCA	ENSMUST00000030134.9|Rad23b|ENSMUSG00000028426.11|RAD23 homolog B, nucleotide excision repair protein
mm39_v1_chr10_-_7539009_7539073	0.127969	AGCAGCA	ENSMUST00000163085.8|Pcmt1|ENSMUSG00000019795.18|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1	ENSMUST00000159917.8|Pcmt1|ENSMUSG00000019795.18|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
mm39_v1_chr1_-_154602102_154602132	0.124991	AGCAGCA	ENSMUST00000187541.7|Cacna1e|ENSMUSG00000004110.18|calcium channel, voltage-dependent, R type, alpha 1E subunit
mm39_v1_chr8_-_87611849_87611935	0.122527	AGCAGCA	ENSMUST00000034074.8|N4bp1|ENSMUSG00000031652.12|NEDD4 binding protein 1
mm39_v1_chr1_-_158785937_158785937	0.121968	AGCAGCA	ENSMUST00000159861.9|Pappa2|ENSMUSG00000073530.12|pappalysin 2
mm39_v1_chr15_-_101268036_101268050	0.115066	AGCAGCA	ENSMUST00000077196.6|Krt80|ENSMUSG00000037185.10|keratin 80
mm39_v1_chr2_-_66086919_66086990	0.113589	AGCAGCA	ENSMUST00000125446.3|Ttc21b|ENSMUSG00000034848.18|tetratricopeptide repeat domain 21B	ENSMUST00000102718.10|Ttc21b|ENSMUSG00000034848.18|tetratricopeptide repeat domain 21B
mm39_v1_chr1_+_172348611_172348748	0.111372	AGCAGCA	ENSMUST00000085894.12|Cfap45|ENSMUSG00000026546.17|cilia and flagella associated protein 45	ENSMUST00000161140.8|Cfap45|ENSMUSG00000026546.17|cilia and flagella associated protein 45	ENSMUST00000162988.8|Cfap45|ENSMUSG00000026546.17|cilia and flagella associated protein 45
mm39_v1_chr8_+_111760521_111760565	0.111283	AGCAGCA	ENSMUST00000034441.8|Aars|ENSMUSG00000031960.15|alanyl-tRNA synthetase
mm39_v1_chr9_+_102594867_102594929	0.110725	AGCAGCA	ENSMUST00000035121.14|Amotl2|ENSMUSG00000032531.16|angiomotin-like 2
mm39_v1_chr16_+_35361635_35361732	0.106166	AGCAGCA	ENSMUST00000120756.8|Sema5b|ENSMUSG00000052133.17|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
mm39_v1_chr5_-_99400698_99400786	0.103649	AGCAGCA	ENSMUST00000031276.15|Rasgef1b|ENSMUSG00000089809.10|RasGEF domain family, member 1B	ENSMUST00000168092.8|Rasgef1b|ENSMUSG00000089809.10|RasGEF domain family, member 1B
mm39_v1_chr11_+_60590584_60590671	0.0959909	AGCAGCA	ENSMUST00000108719.4|Llgl1|ENSMUSG00000020536.13|LLGL1 scribble cell polarity complex component
mm39_v1_chr14_-_7648948_7648998	0.0957724	AGCAGCA	ENSMUST00000112630.9|Nek10|ENSMUSG00000042567.21|NIMA (never in mitosis gene a)- related kinase 10	ENSMUST00000112631.9|Nek10|ENSMUSG00000042567.21|NIMA (never in mitosis gene a)- related kinase 10
mm39_v1_chr6_-_32565127_32565148	0.0929938	AGCAGCA	ENSMUST00000115096.4|Plxna4|ENSMUSG00000029765.13|plexin A4
mm39_v1_chr18_-_15196612_15196675	0.0896579	AGCAGCA	ENSMUST00000168989.9|Kctd1|ENSMUSG00000036225.16|potassium channel tetramerisation domain containing 1
mm39_v1_chr8_-_78451055_78451113	0.0865136	AGCAGCA	ENSMUST00000034029.8|Ednra|ENSMUSG00000031616.8|endothelin receptor type A
mm39_v1_chr11_+_78079243_78079311	0.0843308	AGCAGCA	ENSMUST00000002128.14|Rab34|ENSMUSG00000002059.19|RAB34, member RAS oncogene family	ENSMUST00000150941.8|Rab34|ENSMUSG00000002059.19|RAB34, member RAS oncogene family
mm39_v1_chr6_-_115652831_115652925	0.0835104	AGCAGCA	ENSMUST00000112949.8|Raf1|ENSMUSG00000000441.18|v-raf-leukemia viral oncogene 1
mm39_v1_chr18_+_76374651_76374804	0.0799864	AGCAGCA	ENSMUST00000168423.9|Smad2|ENSMUSG00000024563.17|SMAD family member 2	ENSMUST00000091831.13|Smad2|ENSMUSG00000024563.17|SMAD family member 2
mm39_v1_chr5_+_93241287_93241310	0.0793387	AGCAGCA	ENSMUST00000074733.11|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000201700.4|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000202196.4|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000202308.4|Septin11|ENSMUSG00000058013.12|septin 11
mm39_v1_chr1_-_134289670_134289736	0.0787836	AGCAGCA	ENSMUST00000049470.11|Tmem183a|ENSMUSG00000042305.13|transmembrane protein 183A
mm39_v1_chr5_+_12433344_12433362	0.0767646	AGCAGCA	ENSMUST00000030868.11|Sema3d|ENSMUSG00000040254.12|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
mm39_v1_chr4_-_149511059_149511206	0.0755827	AGCAGCA	ENSMUST00000103212.10|Ube4b|ENSMUSG00000028960.21|ubiquitination factor E4B
mm39_v1_chr14_+_117163215_117163348	0.0720746	AGCAGCA	ENSMUST00000078849.12|Gpc6|ENSMUSG00000058571.12|glypican 6
mm39_v1_chr14_+_20979466_20979519	0.0693393	AGCAGCA	ENSMUST00000022369.9|Vcl|ENSMUSG00000021823.11|vinculin
mm39_v1_chr2_-_160950936_160950950	0.0675009	AGCAGCA	ENSMUST00000039782.14|Chd6|ENSMUSG00000057133.15|chromodomain helicase DNA binding protein 6	ENSMUST00000134178.8|Chd6|ENSMUSG00000057133.15|chromodomain helicase DNA binding protein 6
mm39_v1_chr11_+_87482971_87483055	0.0643342	AGCAGCA	ENSMUST00000103179.10|Mtmr4|ENSMUSG00000018401.18|myotubularin related protein 4	ENSMUST00000092802.12|Mtmr4|ENSMUSG00000018401.18|myotubularin related protein 4	ENSMUST00000146871.8|Mtmr4|ENSMUSG00000018401.18|myotubularin related protein 4
mm39_v1_chr19_+_8931187_8931221	0.0606058	AGCAGCA	ENSMUST00000096239.7|Tut1|ENSMUSG00000071645.7|terminal uridylyl transferase 1, U6 snRNA-specific
mm39_v1_chrX_+_35592006_35592071	0.0586581	AGCAGCA	ENSMUST00000016383.10|Lonrf3|ENSMUSG00000016239.12|LON peptidase N-terminal domain and ring finger 3
mm39_v1_chr11_-_115494692_115494877	0.0570306	AGCAGCA	ENSMUST00000125097.2|Gga3|ENSMUSG00000020740.14|golgi associated, gamma adaptin ear containing, ARF binding protein 3	ENSMUST00000019135.14|Gga3|ENSMUSG00000020740.14|golgi associated, gamma adaptin ear containing, ARF binding protein 3	ENSMUST00000106508.10|Gga3|ENSMUSG00000020740.14|golgi associated, gamma adaptin ear containing, ARF binding protein 3
mm39_v1_chr5_+_73648368_73648452	0.0551925	AGCAGCA	ENSMUST00000113558.8|Dcun1d4|ENSMUSG00000051674.16|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	ENSMUST00000063882.12|Dcun1d4|ENSMUSG00000051674.16|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
mm39_v1_chr4_+_148888877_148888897	0.0546139	AGCAGCA	ENSMUST00000094464.10|Casz1|ENSMUSG00000028977.18|castor zinc finger 1	ENSMUST00000122222.8|Casz1|ENSMUSG00000028977.18|castor zinc finger 1
mm39_v1_chr8_-_111754379_111754423	0.0544334	AGCAGCA	ENSMUST00000040241.15|Ddx19b|ENSMUSG00000033658.17|DEAD box helicase 19b
mm39_v1_chr11_+_105927698_105927716	0.0539229	AGCAGCA	ENSMUST00000058438.9|Dcaf7|ENSMUSG00000049354.9|DDB1 and CUL4 associated factor 7
mm39_v1_chr12_-_69728572_69728632	0.0534159	AGCAGCA	ENSMUST00000183277.8|Sos2|ENSMUSG00000034801.14|SOS Ras/Rho guanine nucleotide exchange factor 2	ENSMUST00000035773.14|Sos2|ENSMUSG00000034801.14|SOS Ras/Rho guanine nucleotide exchange factor 2
mm39_v1_chr14_+_48358267_48358285	0.0529654	AGCAGCA	ENSMUST00000073150.6|Peli2|ENSMUSG00000021846.10|pellino 2
mm39_v1_chr15_+_58287305_58287361	0.0501312	AGCAGCA	ENSMUST00000037270.5|Fam91a1|ENSMUSG00000037119.5|family with sequence similarity 91, member A1
mm39_v1_chrX_+_102400061_102400094	0.0493495	AGCAGCA	ENSMUST00000116547.3|Chic1|ENSMUSG00000031327.11|cysteine-rich hydrophobic domain 1
mm39_v1_chr15_+_11064887_11064909	0.0489731	AGCAGCA	ENSMUST00000061318.9|Adamts12|ENSMUSG00000047497.11|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12
mm39_v1_chr4_-_56947411_56947448	0.0464084	AGCAGCA	ENSMUST00000107609.4|Tmem245|ENSMUSG00000055296.15|transmembrane protein 245	ENSMUST00000068792.13|Tmem245|ENSMUSG00000055296.15|transmembrane protein 245
mm39_v1_chr2_-_167503416_167503502	0.0463401	AGCAGCA	ENSMUST00000125544.3|Gm20431|ENSMUSG00000089739.3|predicted gene 20431	ENSMUST00000006587.7|Tmem189|ENSMUSG00000090213.2|transmembrane protein 189
mm39_v1_chr15_-_78687216_78687251	0.0428578	AGCAGCA	ENSMUST00000164826.8|Card10|ENSMUSG00000033170.15|caspase recruitment domain family, member 10
mm39_v1_chr19_-_12478803_12478818	0.0418927	AGCAGCA	ENSMUST00000045521.9|Dtx4|ENSMUSG00000039982.9|deltex 4, E3 ubiquitin ligase
mm39_v1_chr12_-_85017586_85017674	0.0414032	AGCAGCA	ENSMUST00000165886.2|Arel1|ENSMUSG00000042350.14|apoptosis resistant E3 ubiquitin protein ligase 1	ENSMUST00000167448.8|Arel1|ENSMUSG00000042350.14|apoptosis resistant E3 ubiquitin protein ligase 1	ENSMUST00000043169.14|Arel1|ENSMUSG00000042350.14|apoptosis resistant E3 ubiquitin protein ligase 1
mm39_v1_chr9_+_35122451_35122520	0.0376345	AGCAGCA	ENSMUST00000034541.12|Srpr|ENSMUSG00000032042.12|signal recognition particle receptor ('docking protein')
mm39_v1_chr3_+_96552895_96552924	0.0318891	AGCAGCA	ENSMUST00000119365.8|Itga10|ENSMUSG00000090210.8|integrin, alpha 10	ENSMUST00000029744.6|Itga10|ENSMUSG00000090210.8|integrin, alpha 10
mm39_v1_chr8_+_91555449_91555470	0.0291769	AGCAGCA	ENSMUST00000109614.9|Chd9|ENSMUSG00000056608.15|chromodomain helicase DNA binding protein 9
mm39_v1_chr4_-_58912678_58912776	0.0290316	AGCAGCA	ENSMUST00000144512.8|Ecpas|ENSMUSG00000050812.19|Ecm29 proteasome adaptor and scaffold	ENSMUST00000102889.10|Ecpas|ENSMUSG00000050812.19|Ecm29 proteasome adaptor and scaffold	ENSMUST00000055822.15|Ecpas|ENSMUSG00000050812.19|Ecm29 proteasome adaptor and scaffold
mm39_v1_chr18_-_38102799_38102836	0.0279597	AGCAGCA	ENSMUST00000166148.8|Fchsd1|ENSMUSG00000038524.14|FCH and double SH3 domains 1	ENSMUST00000163131.8|Fchsd1|ENSMUSG00000038524.14|FCH and double SH3 domains 1	ENSMUST00000043437.14|Fchsd1|ENSMUSG00000038524.14|FCH and double SH3 domains 1
mm39_v1_chr11_-_96668318_96668385	0.0275074	AGCAGCA	ENSMUST00000127375.2|Snx11|ENSMUSG00000020876.15|sorting nexin 11	ENSMUST00000021246.9|Snx11|ENSMUSG00000020876.15|sorting nexin 11	ENSMUST00000107661.10|Snx11|ENSMUSG00000020876.15|sorting nexin 11
mm39_v1_chr4_-_137084973_137085033	0.0274064	AGCAGCA	ENSMUST00000030417.10|Cdc42|ENSMUSG00000006699.18|cell division cycle 42	ENSMUST00000051477.13|Cdc42|ENSMUSG00000006699.18|cell division cycle 42
mm39_v1_chr11_+_101207021_101207123	0.0265655	AGCAGCA	ENSMUST00000142640.8|Psme3|ENSMUSG00000078652.10|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)	ENSMUST00000019470.14|Psme3|ENSMUSG00000078652.10|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
mm39_v1_chr12_-_108145498_108145594	0.0262685	AGCAGCA	ENSMUST00000071095.14|Setd3|ENSMUSG00000056770.16|SET domain containing 3
mm39_v1_chr1_+_171156568_171156713	0.0256616	AGCAGCA	ENSMUST00000111300.8|Dedd|ENSMUSG00000013973.13|death effector domain-containing
mm39_v1_chr11_-_104441218_104441347	0.025276	AGCAGCA	ENSMUST00000106962.9|Cdc27|ENSMUSG00000020687.14|cell division cycle 27	ENSMUST00000106961.2|Cdc27|ENSMUSG00000020687.14|cell division cycle 27	ENSMUST00000093923.9|Cdc27|ENSMUSG00000020687.14|cell division cycle 27
mm39_v1_chr1_-_24044688_24044737	0.0239094	AGCAGCA	ENSMUST00000027338.4|Sdhaf4|ENSMUSG00000026154.5|succinate dehydrogenase complex assembly factor 4
mm39_v1_chr3_-_157742267_157742283	0.0225	AGCAGCA	ENSMUST00000121326.8|Srsf11|ENSMUSG00000055436.19|serine and arginine-rich splicing factor 11
mm39_v1_chr14_-_47805861_47805896	0.0223431	AGCAGCA	ENSMUST00000228784.2|Atg14|ENSMUSG00000037526.8|autophagy related 14	ENSMUST00000042988.7|Atg14|ENSMUSG00000037526.8|autophagy related 14
mm39_v1_chr14_-_70837253_70837327	0.0196516	AGCAGCA	ENSMUST00000022690.10|Fam160b2|ENSMUSG00000022095.10|family with sequence similarity 160, member B2
mm39_v1_chr12_-_31684588_31684679	0.0170719	AGCAGCA	ENSMUST00000020979.9|Bcap29|ENSMUSG00000020650.16|B cell receptor associated protein 29	ENSMUST00000177962.9|Bcap29|ENSMUSG00000020650.16|B cell receptor associated protein 29
mm39_v1_chrX_-_37341274_37341316	0.0166481	AGCAGCA	ENSMUST00000089056.10|Tmem255a|ENSMUSG00000036502.15|transmembrane protein 255A	ENSMUST00000089054.11|Tmem255a|ENSMUSG00000036502.15|transmembrane protein 255A	ENSMUST00000066498.8|Tmem255a|ENSMUSG00000036502.15|transmembrane protein 255A
mm39_v1_chr12_-_87247082_87247228	0.0159422	AGCAGCA	ENSMUST00000037418.7|Tmed8|ENSMUSG00000034111.7|transmembrane p24 trafficking protein 8
mm39_v1_chr5_-_108022900_108022973	0.0150825	AGCAGCA	ENSMUST00000138111.8|Evi5|ENSMUSG00000011831.17|ecotropic viral integration site 5	ENSMUST00000112642.8|Evi5|ENSMUSG00000011831.17|ecotropic viral integration site 5
mm39_v1_chr5_-_135423353_135423412	0.0125418	AGCAGCA	ENSMUST00000111171.6|Pom121|ENSMUSG00000053293.10|nuclear pore membrane protein 121
mm39_v1_chr14_+_56062422_56062494	0.0095813	AGCAGCA	ENSMUST00000172271.9|Nfatc4|ENSMUSG00000023411.13|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 4
mm39_v1_chr19_-_5974825_5974851	0.00836774	AGCAGCA	ENSMUST00000055458.6|Cdc42ep2|ENSMUSG00000045664.6|CDC42 effector protein (Rho GTPase binding) 2
mm39_v1_chr3_+_96011810_96011883	0.00712909	AGCAGCA	ENSMUST00000132980.8|Otud7b|ENSMUSG00000038495.15|OTU domain containing 7B	ENSMUST00000138206.8|Otud7b|ENSMUSG00000038495.15|OTU domain containing 7B	ENSMUST00000090785.9|Otud7b|ENSMUSG00000038495.15|OTU domain containing 7B	ENSMUST00000035519.12|Otud7b|ENSMUSG00000038495.15|OTU domain containing 7B
mm39_v1_chr11_-_85125889_85125963	0.00586527	AGCAGCA	ENSMUST00000018625.10|Appbp2|ENSMUSG00000018481.10|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
