mm39_v1_chr6_-_86646118_86646149	4.45421	AGCUGCC	ENSMUST00000001184.10|Mxd1|ENSMUSG00000001156.10|MAX dimerization protein 1
mm39_v1_chr9_-_45847344_45847404	3.9361	AGCUGCC	ENSMUST00000034590.4|Tagln|ENSMUSG00000032085.6|transgelin
mm39_v1_chr13_+_49761506_49761539	3.75931	AGCUGCC	ENSMUST00000021822.7|Ogn|ENSMUSG00000021390.7|osteoglycin
mm39_v1_chr11_+_116089678_116089729	3.52696	AGCUGCC	ENSMUST00000021130.7|Ten1|ENSMUSG00000020778.13|TEN1 telomerase capping complex subunit
mm39_v1_chr5_+_114912738_114912738	3.02411	AGCUGCC	ENSMUST00000102578.11|Ankrd13a|ENSMUSG00000041870.18|ankyrin repeat domain 13a
mm39_v1_chr3_+_90520176_90520189	2.67339	AGCUGCC	ENSMUST00000001051.9|S100a6|ENSMUSG00000001025.9|S100 calcium binding protein A6 (calcyclin)
mm39_v1_chr7_-_19005721_19005796	2.66281	AGCUGCC	ENSMUST00000032561.9|Vasp|ENSMUSG00000030403.10|vasodilator-stimulated phosphoprotein
mm39_v1_chr19_-_41836514_41836571	2.55654	AGCUGCC	ENSMUST00000059231.4|Frat2|ENSMUSG00000047604.4|frequently rearranged in advanced T cell lymphomas 2
mm39_v1_chr15_+_78810919_78810935	2.42911	AGCUGCC	ENSMUST00000089377.6|Lgals1|ENSMUSG00000068220.7|lectin, galactose binding, soluble 1
mm39_v1_chr11_+_98727611_98727654	2.3777	AGCUGCC	ENSMUST00000107479.3|Rapgefl1|ENSMUSG00000038020.6|Rap guanine nucleotide exchange factor (GEF)-like 1
mm39_v1_chr1_-_143879877_143879899	2.36697	AGCUGCC	ENSMUST00000127206.8|Rgs2|ENSMUSG00000026360.10|regulator of G-protein signaling 2
mm39_v1_chr15_-_63932288_63932327	2.31882	AGCUGCC	ENSMUST00000063838.11|Cyrib|ENSMUSG00000022378.15|CYFIP related Rac1 interactor B	ENSMUST00000228908.2|Cyrib|ENSMUSG00000022378.15|CYFIP related Rac1 interactor B
mm39_v1_chr11_+_98798627_98798692	2.09336	AGCUGCC	ENSMUST00000092706.13|Cdc6|ENSMUSG00000017499.16|cell division cycle 6
mm39_v1_chr4_+_140427799_140427855	2.05914	AGCUGCC	ENSMUST00000071169.9|Rcc2|ENSMUSG00000040945.14|regulator of chromosome condensation 2
mm39_v1_chr4_-_136563154_136563299	2.03757	AGCUGCC	ENSMUST00000105846.9|Ephb2|ENSMUSG00000028664.15|Eph receptor B2	ENSMUST00000059287.14|Ephb2|ENSMUSG00000028664.15|Eph receptor B2	ENSMUST00000105845.9|Ephb2|ENSMUSG00000028664.15|Eph receptor B2
mm39_v1_chr9_+_100956734_100956815	2.0365	AGCUGCC	ENSMUST00000085177.5|Msl2|ENSMUSG00000066415.5|MSL complex subunit 2
mm39_v1_chr13_-_3968157_3968220	2.01203	AGCUGCC	ENSMUST00000223258.2|Net1|ENSMUSG00000021215.16|neuroepithelial cell transforming gene 1	ENSMUST00000091853.12|Net1|ENSMUSG00000021215.16|neuroepithelial cell transforming gene 1
mm39_v1_chr12_-_77008952_77009014	2.00768	AGCUGCC	ENSMUST00000110395.11|Max|ENSMUSG00000059436.14|Max protein	ENSMUST00000082136.7|Max|ENSMUSG00000059436.14|Max protein
mm39_v1_chr2_-_65955338_65955486	1.94588	AGCUGCC	ENSMUST00000028378.4|Galnt3|ENSMUSG00000026994.10|polypeptide N-acetylgalactosaminyltransferase 3
mm39_v1_chr9_-_77452152_77452196	1.93318	AGCUGCC	ENSMUST00000183873.8|Lrrc1|ENSMUSG00000032352.17|leucine rich repeat containing 1
mm39_v1_chr10_+_96452860_96452877	1.88767	AGCUGCC	ENSMUST00000038377.9|Btg1|ENSMUSG00000036478.9|BTG anti-proliferation factor 1
mm39_v1_chr3_-_132655954_132656052	1.87128	AGCUGCC	ENSMUST00000042744.16|Npnt|ENSMUSG00000040998.19|nephronectin	ENSMUST00000117811.8|Npnt|ENSMUSG00000040998.19|nephronectin
mm39_v1_chr10_-_59787646_59787663	1.87036	AGCUGCC	ENSMUST00000020308.5|Ddit4|ENSMUSG00000020108.5|DNA-damage-inducible transcript 4
mm39_v1_chr13_+_5911481_5911521	1.86702	AGCUGCC	ENSMUST00000000080.8|Klf6|ENSMUSG00000000078.8|Kruppel-like factor 6
mm39_v1_chr2_+_38821987_38822019	1.86417	AGCUGCC	ENSMUST00000057279.6|Olfml2a|ENSMUSG00000046618.8|olfactomedin-like 2A
mm39_v1_chr4_-_149783097_149783165	1.81411	AGCUGCC	ENSMUST00000038859.14|Pik3cd|ENSMUSG00000039936.19|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta	ENSMUST00000105690.9|Pik3cd|ENSMUSG00000039936.19|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
mm39_v1_chr11_-_69304501_69304501	1.77574	AGCUGCC	ENSMUST00000094077.5|Kdm6b|ENSMUSG00000018476.8|KDM1 lysine (K)-specific demethylase 6B
mm39_v1_chr11_+_96820091_96820175	1.7456	AGCUGCC	ENSMUST00000054311.6|Prr15l|ENSMUSG00000047040.10|proline rich 15-like	ENSMUST00000107636.4|Prr15l|ENSMUSG00000047040.10|proline rich 15-like
mm39_v1_chr15_+_81469538_81469598	1.70083	AGCUGCC	ENSMUST00000068387.11|Ep300|ENSMUSG00000055024.13|E1A binding protein p300
mm39_v1_chr12_-_87435091_87435129	1.67575	AGCUGCC	ENSMUST00000021424.5|Sptlc2|ENSMUSG00000021036.11|serine palmitoyltransferase, long chain base subunit 2
mm39_v1_chr2_-_153083322_153083346	1.65887	AGCUGCC	ENSMUST00000056924.14|Plagl2|ENSMUSG00000051413.18|pleiomorphic adenoma gene-like 2
mm39_v1_chr3_-_116217579_116217681	1.58739	AGCUGCC	ENSMUST00000106491.7|Cdc14a|ENSMUSG00000033502.16|CDC14 cell division cycle 14A	ENSMUST00000090464.7|Cdc14a|ENSMUSG00000033502.16|CDC14 cell division cycle 14A
mm39_v1_chr15_-_36794741_36794791	1.51492	AGCUGCC	ENSMUST00000110361.8|Ywhaz|ENSMUSG00000022285.18|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	ENSMUST00000022894.14|Ywhaz|ENSMUSG00000022285.18|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	ENSMUST00000110359.2|Ywhaz|ENSMUSG00000022285.18|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm39_v1_chr6_-_83294526_83294593	1.49651	AGCUGCC	ENSMUST00000005810.9|Mthfd2|ENSMUSG00000005667.9|methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase
mm39_v1_chr2_+_22785534_22785581	1.48428	AGCUGCC	ENSMUST00000053729.14|Pdss1|ENSMUSG00000026784.15|prenyl (solanesyl) diphosphate synthase, subunit 1
mm39_v1_chr7_+_92524460_92524485	1.45843	AGCUGCC	ENSMUST00000076052.8|Prcp|ENSMUSG00000061119.8|prolylcarboxypeptidase (angiotensinase C)
mm39_v1_chr11_-_115918784_115918826	1.44247	AGCUGCC	ENSMUST00000106454.8|H3f3b|ENSMUSG00000016559.15|H3.3 histone B
mm39_v1_chr4_+_11156411_11156453	1.4366	AGCUGCC	ENSMUST00000029865.4|Trp53inp1|ENSMUSG00000028211.12|transformation related protein 53 inducible nuclear protein 1
mm39_v1_chr4_-_99717359_99717428	1.42658	AGCUGCC	ENSMUST00000146258.2|Itgb3bp|ENSMUSG00000028549.18|integrin beta 3 binding protein (beta3-endonexin)
mm39_v1_chr2_+_31042328_31042372	1.35774	AGCUGCC	ENSMUST00000056433.7|Gpr107|ENSMUSG00000000194.14|G protein-coupled receptor 107
mm39_v1_chr1_+_152642291_152642302	1.33312	AGCUGCC	ENSMUST00000077755.11|Arpc5|ENSMUSG00000008475.14|actin related protein 2/3 complex, subunit 5	ENSMUST00000097536.6|Arpc5|ENSMUSG00000008475.14|actin related protein 2/3 complex, subunit 5
mm39_v1_chr2_+_36120438_36120557	1.29507	AGCUGCC	ENSMUST00000062069.6|Ptgs1|ENSMUSG00000047250.14|prostaglandin-endoperoxide synthase 1
mm39_v1_chr1_-_74544946_74545004	1.2911	AGCUGCC	ENSMUST00000044260.11|Usp37|ENSMUSG00000033364.14|ubiquitin specific peptidase 37	ENSMUST00000186282.7|Usp37|ENSMUSG00000033364.14|ubiquitin specific peptidase 37
mm39_v1_chr17_-_48716756_48716934	1.27118	AGCUGCC	ENSMUST00000160319.8|Nfya|ENSMUSG00000023994.14|nuclear transcription factor-Y alpha	ENSMUST00000159535.2|Nfya|ENSMUSG00000023994.14|nuclear transcription factor-Y alpha	ENSMUST00000078800.13|Nfya|ENSMUSG00000023994.14|nuclear transcription factor-Y alpha	ENSMUST00000046719.14|Nfya|ENSMUSG00000023994.14|nuclear transcription factor-Y alpha	ENSMUST00000162460.8|Nfya|ENSMUSG00000023994.14|nuclear transcription factor-Y alpha
mm39_v1_chr1_+_159871943_159872024	1.25084	AGCUGCC	ENSMUST00000163892.8|4930523C07Rik|ENSMUSG00000090394.9|RIKEN cDNA 4930523C07 gene
mm39_v1_chr16_+_95502911_95502960	1.21654	AGCUGCC	ENSMUST00000023612.17|Ets2|ENSMUSG00000022895.17|E26 avian leukemia oncogene 2, 3' domain
mm39_v1_chr13_+_55517545_55517589	1.16238	AGCUGCC	ENSMUST00000063771.14|Rgs14|ENSMUSG00000052087.15|regulator of G-protein signaling 14
mm39_v1_chr17_-_74630882_74630947	1.15711	AGCUGCC	ENSMUST00000164832.9|Dpy30|ENSMUSG00000024067.15|dpy-30, histone methyltransferase complex regulatory subunit
mm39_v1_chr5_+_64317550_64317564	1.13958	AGCUGCC	ENSMUST00000101195.9|Tbc1d1|ENSMUSG00000029174.19|TBC1 domain family, member 1
mm39_v1_chr14_+_56122404_56122467	1.1393	AGCUGCC	ENSMUST00000022831.5|Khnyn|ENSMUSG00000047153.5|KH and NYN domain containing
mm39_v1_chr5_-_140634773_140634807	1.12773	AGCUGCC	ENSMUST00000197452.5|Ttyh3|ENSMUSG00000036565.8|tweety family member 3	ENSMUST00000042661.8|Ttyh3|ENSMUSG00000036565.8|tweety family member 3
mm39_v1_chr4_+_134847949_134847973	1.11909	AGCUGCC	ENSMUST00000056977.14|Runx3|ENSMUSG00000070691.11|runt related transcription factor 3
mm39_v1_chr14_+_26760898_26760951	1.11098	AGCUGCC	ENSMUST00000035336.5|Il17rd|ENSMUSG00000040717.7|interleukin 17 receptor D
mm39_v1_chr14_-_54646917_54646934	1.10723	AGCUGCC	ENSMUST00000000984.9|Slc7a7|ENSMUSG00000000958.11|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
mm39_v1_chr11_+_96024612_96024612	1.06482	AGCUGCC	ENSMUST00000167258.8|Ttll6|ENSMUSG00000038756.14|tubulin tyrosine ligase-like family, member 6
mm39_v1_chr9_-_58220469_58220498	1.06108	AGCUGCC	ENSMUST00000061799.10|Loxl1|ENSMUSG00000032334.11|lysyl oxidase-like 1
mm39_v1_chr11_-_49603501_49603555	1.04879	AGCUGCC	ENSMUST00000020624.7|Cnot6|ENSMUSG00000020362.14|CCR4-NOT transcription complex, subunit 6	ENSMUST00000145353.8|Cnot6|ENSMUSG00000020362.14|CCR4-NOT transcription complex, subunit 6
mm39_v1_chr5_+_108213608_108213634	1.04109	AGCUGCC	ENSMUST00000081567.11|Mtf2|ENSMUSG00000029267.18|metal response element binding transcription factor 2	ENSMUST00000170319.8|Mtf2|ENSMUSG00000029267.18|metal response element binding transcription factor 2	ENSMUST00000112626.8|Mtf2|ENSMUSG00000029267.18|metal response element binding transcription factor 2
mm39_v1_chr6_-_99243455_99243501	1.01889	AGCUGCC	ENSMUST00000113326.9|Foxp1|ENSMUSG00000030067.18|forkhead box P1
mm39_v1_chr3_-_97134680_97134738	1.00621	AGCUGCC	ENSMUST00000046521.14|Bcl9|ENSMUSG00000038256.16|B cell CLL/lymphoma 9
mm39_v1_chr18_-_43571345_43571371	0.993338	AGCUGCC	ENSMUST00000121805.9|Dpysl3|ENSMUSG00000024501.21|dihydropyrimidinase-like 3
mm39_v1_chr7_+_127084283_127084393	0.955727	AGCUGCC	ENSMUST00000048896.8|Fbrs|ENSMUSG00000042423.10|fibrosin
mm39_v1_chr2_+_75489596_75489662	0.955051	AGCUGCC	ENSMUST00000111964.8|Hnrnpa3|ENSMUSG00000059005.14|heterogeneous nuclear ribonucleoprotein A3	ENSMUST00000111962.8|Hnrnpa3|ENSMUSG00000059005.14|heterogeneous nuclear ribonucleoprotein A3	ENSMUST00000111961.8|Hnrnpa3|ENSMUSG00000059005.14|heterogeneous nuclear ribonucleoprotein A3	ENSMUST00000164947.9|Hnrnpa3|ENSMUSG00000059005.14|heterogeneous nuclear ribonucleoprotein A3	ENSMUST00000090792.11|Hnrnpa3|ENSMUSG00000059005.14|heterogeneous nuclear ribonucleoprotein A3
mm39_v1_chr8_+_23349543_23349570	0.924692	AGCUGCC	ENSMUST00000238975.2|Kat6a|ENSMUSG00000031540.15|K(lysine) acetyltransferase 6A	ENSMUST00000110696.8|Kat6a|ENSMUSG00000031540.15|K(lysine) acetyltransferase 6A	ENSMUST00000044331.7|Kat6a|ENSMUSG00000031540.15|K(lysine) acetyltransferase 6A
mm39_v1_chr1_-_162567919_162568103	0.923066	AGCUGCC	ENSMUST00000182331.2|Prrc2c|ENSMUSG00000040225.16|proline-rich coiled-coil 2C	ENSMUST00000183011.8|Prrc2c|ENSMUSG00000040225.16|proline-rich coiled-coil 2C	ENSMUST00000182593.8|Prrc2c|ENSMUSG00000040225.16|proline-rich coiled-coil 2C	ENSMUST00000182149.8|Prrc2c|ENSMUSG00000040225.16|proline-rich coiled-coil 2C
mm39_v1_chr5_+_143608194_143608215	0.907679	AGCUGCC	ENSMUST00000116456.10|Cyth3|ENSMUSG00000018001.19|cytohesin 3
mm39_v1_chr5_-_96309849_96309956	0.894306	AGCUGCC	ENSMUST00000155901.8|Cnot6l|ENSMUSG00000034724.19|CCR4-NOT transcription complex, subunit 6-like
mm39_v1_chr16_-_4340920_4340939	0.891977	AGCUGCC	ENSMUST00000090500.10|Srl|ENSMUSG00000022519.15|sarcalumenin	ENSMUST00000023161.8|Srl|ENSMUSG00000022519.15|sarcalumenin
mm39_v1_chr4_+_59189239_59189257	0.890085	AGCUGCC	ENSMUST00000030074.8|Ugcg|ENSMUSG00000028381.9|UDP-glucose ceramide glucosyltransferase
mm39_v1_chr3_+_60408600_60408663	0.870436	AGCUGCC	ENSMUST00000099087.8|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1
mm39_v1_chr2_-_68302612_68302660	0.869575	AGCUGCC	ENSMUST00000102715.4|Stk39|ENSMUSG00000027030.16|serine/threonine kinase 39
mm39_v1_chr2_+_90575714_90575813	0.868152	AGCUGCC	ENSMUST00000238890.2|Fnbp4|ENSMUSG00000008200.16|formin binding protein 4	ENSMUST00000013759.6|Fnbp4|ENSMUSG00000008200.16|formin binding protein 4
mm39_v1_chr1_-_131025562_131025581	0.862938	AGCUGCC	ENSMUST00000016672.11|Mapkapk2|ENSMUSG00000016528.11|MAP kinase-activated protein kinase 2
mm39_v1_chrX_+_35375751_35375766	0.851146	AGCUGCC	ENSMUST00000033418.8|Il13ra1|ENSMUSG00000017057.10|interleukin 13 receptor, alpha 1
mm39_v1_chr14_-_70837253_70837327	0.841866	AGCUGCC	ENSMUST00000022690.10|Fam160b2|ENSMUSG00000022095.10|family with sequence similarity 160, member B2
mm39_v1_chr4_+_137196080_137196124	0.838374	AGCUGCC	ENSMUST00000030547.15|Hspg2|ENSMUSG00000028763.19|perlecan (heparan sulfate proteoglycan 2)	ENSMUST00000171332.2|Hspg2|ENSMUSG00000028763.19|perlecan (heparan sulfate proteoglycan 2)
mm39_v1_chr16_-_4536992_4537028	0.8359	AGCUGCC	ENSMUST00000115851.10|Nmral1|ENSMUSG00000063445.15|NmrA-like family domain containing 1
mm39_v1_chr19_-_5962862_5962899	0.835601	AGCUGCC	ENSMUST00000136983.8|Dpf2|ENSMUSG00000024826.16|D4, zinc and double PHD fingers family 2
mm39_v1_chr17_+_29312737_29312755	0.829943	AGCUGCC	ENSMUST00000023829.8|Cdkn1a|ENSMUSG00000023067.15|cyclin-dependent kinase inhibitor 1A (P21)	ENSMUST00000233296.2|Cdkn1a|ENSMUSG00000023067.15|cyclin-dependent kinase inhibitor 1A (P21)
mm39_v1_chr11_+_115714853_115714923	0.829347	AGCUGCC	ENSMUST00000103032.11|Llgl2|ENSMUSG00000020782.19|LLGL2 scribble cell polarity complex component	ENSMUST00000133250.8|Llgl2|ENSMUSG00000020782.19|LLGL2 scribble cell polarity complex component	ENSMUST00000177736.8|Llgl2|ENSMUSG00000020782.19|LLGL2 scribble cell polarity complex component
mm39_v1_chrX_+_158410229_158410294	0.825084	AGCUGCC	ENSMUST00000112456.9|Sh3kbp1|ENSMUSG00000040990.18|SH3-domain kinase binding protein 1
mm39_v1_chr1_-_151965876_151965918	0.819925	AGCUGCC	ENSMUST00000044581.14|1700025G04Rik|ENSMUSG00000032666.17|RIKEN cDNA 1700025G04 gene
mm39_v1_chr13_-_113755082_113755101	0.803969	AGCUGCC	ENSMUST00000109241.5|Snx18|ENSMUSG00000042364.12|sorting nexin 18
mm39_v1_chr16_+_24212284_24212320	0.803452	AGCUGCC	ENSMUST00000038053.14|Lpp|ENSMUSG00000033306.16|LIM domain containing preferred translocation partner in lipoma
mm39_v1_chr19_-_5925296_5925307	0.788866	AGCUGCC	ENSMUST00000025728.13|Frmd8|ENSMUSG00000024816.13|FERM domain containing 8
mm39_v1_chr2_-_33777874_33777958	0.787411	AGCUGCC	ENSMUST00000041555.10|Mvb12b|ENSMUSG00000038740.10|multivesicular body subunit 12B
mm39_v1_chr10_+_13428638_13428638	0.777457	AGCUGCC	ENSMUST00000019944.9|Adat2|ENSMUSG00000019808.9|adenosine deaminase, tRNA-specific 2
mm39_v1_chr13_+_44884740_44884752	0.768918	AGCUGCC	ENSMUST00000173246.8|Jarid2|ENSMUSG00000038518.16|jumonji, AT rich interactive domain 2
mm39_v1_chr4_+_62883796_62883854	0.760501	AGCUGCC	ENSMUST00000030043.13|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618	ENSMUST00000107415.8|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618	ENSMUST00000064814.6|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618
mm39_v1_chr16_+_37597235_37597235	0.736696	AGCUGCC	ENSMUST00000114763.3|Fstl1|ENSMUSG00000022816.12|follistatin-like 1
mm39_v1_chr11_-_94133527_94133539	0.734648	AGCUGCC	ENSMUST00000061469.4|Wfikkn2|ENSMUSG00000044177.5|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2
mm39_v1_chr6_-_52168675_52168733	0.703684	AGCUGCC	ENSMUST00000101395.3|Hoxa4|ENSMUSG00000000942.11|homeobox A4
mm39_v1_chr3_+_88439616_88439703	0.691617	AGCUGCC	ENSMUST00000172699.2|Mex3a|ENSMUSG00000074480.5|mex3 RNA binding family member A
mm39_v1_chrX_+_141464393_141464425	0.683569	AGCUGCC	ENSMUST00000112889.8|Tmem164|ENSMUSG00000047045.18|transmembrane protein 164	ENSMUST00000101198.9|Tmem164|ENSMUSG00000047045.18|transmembrane protein 164	ENSMUST00000112891.8|Tmem164|ENSMUSG00000047045.18|transmembrane protein 164	ENSMUST00000087333.9|Tmem164|ENSMUSG00000047045.18|transmembrane protein 164
mm39_v1_chr9_+_109704609_109704684	0.676058	AGCUGCC	ENSMUST00000094324.8|Cdc25a|ENSMUSG00000032477.15|cell division cycle 25A
mm39_v1_chr10_+_25235696_25235742	0.673018	AGCUGCC	ENSMUST00000053748.16|Epb41l2|ENSMUSG00000019978.17|erythrocyte membrane protein band 4.1 like 2
mm39_v1_chr12_+_3857001_3857064	0.670252	AGCUGCC	ENSMUST00000020991.15|Dnmt3a|ENSMUSG00000020661.16|DNA methyltransferase 3A	ENSMUST00000172509.8|Dnmt3a|ENSMUSG00000020661.16|DNA methyltransferase 3A
mm39_v1_chr11_+_100306523_100306592	0.669712	AGCUGCC	ENSMUST00000001595.10|Fkbp10|ENSMUSG00000001555.11|FK506 binding protein 10	ENSMUST00000107400.3|Fkbp10|ENSMUSG00000001555.11|FK506 binding protein 10
mm39_v1_chr8_+_91555449_91555470	0.657391	AGCUGCC	ENSMUST00000109614.9|Chd9|ENSMUSG00000056608.15|chromodomain helicase DNA binding protein 9
mm39_v1_chr12_+_111005768_111005834	0.653146	AGCUGCC	ENSMUST00000084968.14|Rcor1|ENSMUSG00000037896.18|REST corepressor 1
mm39_v1_chr4_-_155306992_155307049	0.652946	AGCUGCC	ENSMUST00000084103.10|Ski|ENSMUSG00000029050.16|ski sarcoma viral oncogene homolog (avian)	ENSMUST00000030917.6|Ski|ENSMUSG00000029050.16|ski sarcoma viral oncogene homolog (avian)
mm39_v1_chr1_+_190830522_190830633	0.637051	AGCUGCC	ENSMUST00000027943.6|Batf3|ENSMUSG00000026630.10|basic leucine zipper transcription factor, ATF-like 3
mm39_v1_chr11_+_51510555_51510641	0.630475	AGCUGCC	ENSMUST00000127405.2|Nhp2|ENSMUSG00000001056.4|NHP2 ribonucleoprotein
mm39_v1_chr4_+_133097013_133097020	0.628166	AGCUGCC	ENSMUST00000030669.8|Slc9a1|ENSMUSG00000028854.10|solute carrier family 9 (sodium/hydrogen exchanger), member 1
mm39_v1_chr16_-_91394522_91394688	0.624547	AGCUGCC	ENSMUST00000023686.15|Tmem50b|ENSMUSG00000022964.15|transmembrane protein 50B
mm39_v1_chr14_+_34395845_34395890	0.616481	AGCUGCC	ENSMUST00000048263.14|Wapl|ENSMUSG00000041408.19|WAPL cohesin release factor
mm39_v1_chr12_-_84923252_84923306	0.614067	AGCUGCC	ENSMUST00000163189.8|Ltbp2|ENSMUSG00000002020.16|latent transforming growth factor beta binding protein 2	ENSMUST00000110254.9|Ltbp2|ENSMUSG00000002020.16|latent transforming growth factor beta binding protein 2	ENSMUST00000002073.13|Ltbp2|ENSMUSG00000002020.16|latent transforming growth factor beta binding protein 2
mm39_v1_chr11_+_101339233_101339313	0.613077	AGCUGCC	ENSMUST00000010502.13|Ifi35|ENSMUSG00000010358.14|interferon-induced protein 35
mm39_v1_chr18_+_32510270_32510342	0.596506	AGCUGCC	ENSMUST00000234857.2|Bin1|ENSMUSG00000024381.17|bridging integrator 1	ENSMUST00000234496.2|Bin1|ENSMUSG00000024381.17|bridging integrator 1	ENSMUST00000091967.13|Bin1|ENSMUSG00000024381.17|bridging integrator 1	ENSMUST00000025239.9|Bin1|ENSMUSG00000024381.17|bridging integrator 1
mm39_v1_chr15_+_102314809_102314833	0.588545	AGCUGCC	ENSMUST00000001326.7|Sp1|ENSMUSG00000001280.14|trans-acting transcription factor 1
mm39_v1_chr1_+_75412574_75412636	0.558597	AGCUGCC	ENSMUST00000037796.14|Gmppa|ENSMUSG00000033021.17|GDP-mannose pyrophosphorylase A	ENSMUST00000113584.8|Gmppa|ENSMUSG00000033021.17|GDP-mannose pyrophosphorylase A	ENSMUST00000145166.8|Gmppa|ENSMUSG00000033021.17|GDP-mannose pyrophosphorylase A	ENSMUST00000143730.8|Gmppa|ENSMUSG00000033021.17|GDP-mannose pyrophosphorylase A	ENSMUST00000133418.8|Gmppa|ENSMUSG00000033021.17|GDP-mannose pyrophosphorylase A	ENSMUST00000144874.8|Gmppa|ENSMUSG00000033021.17|GDP-mannose pyrophosphorylase A	ENSMUST00000140287.8|Gmppa|ENSMUSG00000033021.17|GDP-mannose pyrophosphorylase A
mm39_v1_chr5_-_124465946_124466035	0.557786	AGCUGCC	ENSMUST00000031344.13|Mphosph9|ENSMUSG00000038126.18|M-phase phosphoprotein 9
mm39_v1_chr19_+_44551280_44551318	0.536278	AGCUGCC	ENSMUST00000040455.5|Hif1an|ENSMUSG00000036450.5|hypoxia-inducible factor 1, alpha subunit inhibitor
mm39_v1_chr11_-_100510992_100511036	0.536049	AGCUGCC	ENSMUST00000014339.15|Dnajc7|ENSMUSG00000014195.17|DnaJ heat shock protein family (Hsp40) member C7	ENSMUST00000239490.2|Dnajc7|ENSMUSG00000014195.17|DnaJ heat shock protein family (Hsp40) member C7	ENSMUST00000239410.2|Dnajc7|ENSMUSG00000014195.17|DnaJ heat shock protein family (Hsp40) member C7
mm39_v1_chr14_-_75185281_75185324	0.528582	AGCUGCC	ENSMUST00000088970.7|Lrch1|ENSMUSG00000068015.9|leucine-rich repeats and calponin homology (CH) domain containing 1	ENSMUST00000228252.2|Lrch1|ENSMUSG00000068015.9|leucine-rich repeats and calponin homology (CH) domain containing 1
mm39_v1_chr4_+_148125630_148125656	0.517468	AGCUGCC	ENSMUST00000069604.15|Mthfr|ENSMUSG00000029009.18|methylenetetrahydrofolate reductase
mm39_v1_chr9_+_107464841_107464855	0.517209	AGCUGCC	ENSMUST00000010192.11|Ifrd2|ENSMUSG00000010048.11|interferon-related developmental regulator 2
mm39_v1_chr17_-_84773544_84773612	0.50354	AGCUGCC	ENSMUST00000047524.10|Thada|ENSMUSG00000024251.11|thyroid adenoma associated
mm39_v1_chr4_-_152080634_152080715	0.503007	AGCUGCC	ENSMUST00000055688.10|Phf13|ENSMUSG00000047777.10|PHD finger protein 13
mm39_v1_chrX_-_107877909_107877987	0.488876	AGCUGCC	ENSMUST00000101283.4|Brwd3|ENSMUSG00000063663.12|bromodomain and WD repeat domain containing 3	ENSMUST00000150434.8|Brwd3|ENSMUSG00000063663.12|bromodomain and WD repeat domain containing 3
mm39_v1_chr15_-_102425241_102425499	0.47575	AGCUGCC	ENSMUST00000169162.8|Map3k12|ENSMUSG00000023050.10|mitogen-activated protein kinase kinase kinase 12	ENSMUST00000023812.10|Map3k12|ENSMUSG00000023050.10|mitogen-activated protein kinase kinase kinase 12	ENSMUST00000165174.8|Map3k12|ENSMUSG00000023050.10|mitogen-activated protein kinase kinase kinase 12	ENSMUST00000169367.8|Map3k12|ENSMUSG00000023050.10|mitogen-activated protein kinase kinase kinase 12	ENSMUST00000169377.8|Map3k12|ENSMUSG00000023050.10|mitogen-activated protein kinase kinase kinase 12
mm39_v1_chr3_-_145355725_145355743	0.475288	AGCUGCC	ENSMUST00000029846.5|Ccn1|ENSMUSG00000028195.5|cellular communication network factor 1
mm39_v1_chr12_-_15866763_15866923	0.46994	AGCUGCC	ENSMUST00000020922.8|Trib2|ENSMUSG00000020601.9|tribbles pseudokinase 2	ENSMUST00000221215.2|Trib2|ENSMUSG00000020601.9|tribbles pseudokinase 2	ENSMUST00000221518.2|Trib2|ENSMUSG00000020601.9|tribbles pseudokinase 2
mm39_v1_chr16_-_8610165_8610190	0.466902	AGCUGCC	ENSMUST00000160405.8|Usp7|ENSMUSG00000022710.18|ubiquitin specific peptidase 7
mm39_v1_chr9_+_57615816_57615891	0.460592	AGCUGCC	ENSMUST00000043990.14|Edc3|ENSMUSG00000038957.14|enhancer of mRNA decapping 3	ENSMUST00000142807.2|Edc3|ENSMUSG00000038957.14|enhancer of mRNA decapping 3
mm39_v1_chr7_-_132725075_132725107	0.458815	AGCUGCC	ENSMUST00000163601.8|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2	ENSMUST00000124096.8|Fgfr2|ENSMUSG00000030849.19|fibroblast growth factor receptor 2	ENSMUST00000033269.15|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2
mm39_v1_chr8_+_27575611_27575626	0.453981	AGCUGCC	ENSMUST00000178514.8|Adgra2|ENSMUSG00000031486.16|adhesion G protein-coupled receptor A2	ENSMUST00000033876.14|Adgra2|ENSMUSG00000031486.16|adhesion G protein-coupled receptor A2
mm39_v1_chr4_-_108436514_108436549	0.444226	AGCUGCC	ENSMUST00000079213.6|Prpf38a|ENSMUSG00000063800.6|PRP38 pre-mRNA processing factor 38 (yeast) domain containing A
mm39_v1_chr1_-_23961379_23961508	0.439391	AGCUGCC	ENSMUST00000027339.14|Smap1|ENSMUSG00000026155.14|small ArfGAP 1
mm39_v1_chr11_+_87959067_87959115	0.428758	AGCUGCC	ENSMUST00000018521.11|Vezf1|ENSMUSG00000018377.11|vascular endothelial zinc finger 1
mm39_v1_chrX_-_72868544_72868592	0.424802	AGCUGCC	ENSMUST00000002080.12|Pdzd4|ENSMUSG00000002006.13|PDZ domain containing 4	ENSMUST00000114438.3|Pdzd4|ENSMUSG00000002006.13|PDZ domain containing 4
mm39_v1_chr11_-_18968979_18968990	0.423954	AGCUGCC	ENSMUST00000144988.8|Meis1|ENSMUSG00000020160.19|Meis homeobox 1
mm39_v1_chr7_+_99184645_99184709	0.422297	AGCUGCC	ENSMUST00000098266.9|Arrb1|ENSMUSG00000018909.16|arrestin, beta 1	ENSMUST00000179755.8|Arrb1|ENSMUSG00000018909.16|arrestin, beta 1
mm39_v1_chr1_+_127132712_127132788	0.41885	AGCUGCC	ENSMUST00000038361.11|Mgat5|ENSMUSG00000036155.14|mannoside acetylglucosaminyltransferase 5
mm39_v1_chr6_-_71609881_71609974	0.417372	AGCUGCC	ENSMUST00000065509.11|Kdm3a|ENSMUSG00000053470.14|lysine (K)-specific demethylase 3A	ENSMUST00000207023.2|Kdm3a|ENSMUSG00000053470.14|lysine (K)-specific demethylase 3A
mm39_v1_chr1_-_64160557_64160650	0.409046	AGCUGCC	ENSMUST00000055001.10|Klf7|ENSMUSG00000025959.14|Kruppel-like factor 7 (ubiquitous)	ENSMUST00000114086.8|Klf7|ENSMUSG00000025959.14|Kruppel-like factor 7 (ubiquitous)
mm39_v1_chr12_+_80837284_80837348	0.407311	AGCUGCC	ENSMUST00000220238.2|Susd6|ENSMUSG00000021133.10|sushi domain containing 6	ENSMUST00000068519.7|Susd6|ENSMUSG00000021133.10|sushi domain containing 6
mm39_v1_chr14_+_21549798_21549853	0.404219	AGCUGCC	ENSMUST00000182855.8|Kat6b|ENSMUSG00000021767.20|K(lysine) acetyltransferase 6B	ENSMUST00000182405.9|Kat6b|ENSMUSG00000021767.20|K(lysine) acetyltransferase 6B	ENSMUST00000069648.14|Kat6b|ENSMUSG00000021767.20|K(lysine) acetyltransferase 6B
mm39_v1_chr2_-_102016717_102016735	0.397927	AGCUGCC	ENSMUST00000058790.12|Ldlrad3|ENSMUSG00000048058.18|low density lipoprotein receptor class A domain containing 3
mm39_v1_chr5_-_134581235_134581331	0.386434	AGCUGCC	ENSMUST00000036999.10|Clip2|ENSMUSG00000063146.12|CAP-GLY domain containing linker protein 2	ENSMUST00000100647.7|Clip2|ENSMUSG00000063146.12|CAP-GLY domain containing linker protein 2
mm39_v1_chr18_+_61238908_61238959	0.385862	AGCUGCC	ENSMUST00000115268.4|Csf1r|ENSMUSG00000024621.17|colony stimulating factor 1 receptor
mm39_v1_chr1_-_57011595_57011661	0.385627	AGCUGCC	ENSMUST00000042857.14|Satb2|ENSMUSG00000038331.16|special AT-rich sequence binding protein 2
mm39_v1_chr1_-_34882131_34882148	0.38455	AGCUGCC	ENSMUST00000167518.8|Fam168b|ENSMUSG00000037503.13|family with sequence similarity 168, member B	ENSMUST00000047534.12|Fam168b|ENSMUSG00000037503.13|family with sequence similarity 168, member B
mm39_v1_chr6_+_129385893_129385918	0.376105	AGCUGCC	ENSMUST00000204860.3|Clec9a|ENSMUSG00000046080.18|C-type lectin domain family 9, member a	ENSMUST00000164513.8|Clec9a|ENSMUSG00000046080.18|C-type lectin domain family 9, member a
mm39_v1_chr3_+_99048379_99048388	0.375596	AGCUGCC	ENSMUST00000004343.7|Wars2|ENSMUSG00000004233.15|tryptophanyl tRNA synthetase 2 (mitochondrial)
mm39_v1_chr8_-_95328348_95328625	0.363437	AGCUGCC	ENSMUST00000212547.2|Psme3ip1|ENSMUSG00000031774.9|proteasome activator subunit 3 interacting protein 1	ENSMUST00000212507.2|Psme3ip1|ENSMUSG00000031774.9|proteasome activator subunit 3 interacting protein 1	ENSMUST00000034226.8|Psme3ip1|ENSMUSG00000031774.9|proteasome activator subunit 3 interacting protein 1
mm39_v1_chr11_-_6425877_6425917	0.358417	AGCUGCC	ENSMUST00000179343.3|Purb|ENSMUSG00000094483.3|purine rich element binding protein B
mm39_v1_chr1_+_64571942_64572013	0.348631	AGCUGCC	ENSMUST00000171164.8|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1	ENSMUST00000187811.7|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1	ENSMUST00000049932.12|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1	ENSMUST00000087366.11|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1
mm39_v1_chr13_+_107083613_107083675	0.345335	AGCUGCC	ENSMUST00000022203.10|Dimt1|ENSMUSG00000021692.10|DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)
mm39_v1_chr9_+_107879700_107879879	0.339231	AGCUGCC	ENSMUST00000035214.11|Ip6k1|ENSMUSG00000032594.12|inositol hexaphosphate kinase 1	ENSMUST00000176854.7|Ip6k1|ENSMUSG00000032594.12|inositol hexaphosphate kinase 1	ENSMUST00000175874.2|Ip6k1|ENSMUSG00000032594.12|inositol hexaphosphate kinase 1
mm39_v1_chr2_-_153371861_153371907	0.337072	AGCUGCC	ENSMUST00000035346.14|Nol4l|ENSMUSG00000061411.13|nucleolar protein 4-like
mm39_v1_chr15_+_80595486_80595541	0.329137	AGCUGCC	ENSMUST00000067689.9|Tnrc6b|ENSMUSG00000047888.11|trinucleotide repeat containing 6b
mm39_v1_chr6_+_112436466_112436565	0.323438	AGCUGCC	ENSMUST00000075477.8|Cav3|ENSMUSG00000062694.8|caveolin 3
mm39_v1_chr9_+_106048116_106048153	0.32342	AGCUGCC	ENSMUST00000020490.13|Wdr82|ENSMUSG00000020257.14|WD repeat domain containing 82
mm39_v1_chrX_+_41238193_41238289	0.305732	AGCUGCC	ENSMUST00000115073.9|Stag2|ENSMUSG00000025862.15|stromal antigen 2	ENSMUST00000115072.8|Stag2|ENSMUSG00000025862.15|stromal antigen 2
mm39_v1_chr17_-_46867083_46867114	0.305485	AGCUGCC	ENSMUST00000015749.7|Srf|ENSMUSG00000015605.7|serum response factor
mm39_v1_chr18_+_61688329_61688361	0.304496	AGCUGCC	ENSMUST00000165123.8|Csnk1a1|ENSMUSG00000024576.15|casein kinase 1, alpha 1
mm39_v1_chr4_-_134014525_134014575	0.303271	AGCUGCC	ENSMUST00000145006.8|Pdik1l|ENSMUSG00000050890.16|PDLIM1 interacting kinase 1 like	ENSMUST00000105877.9|Pdik1l|ENSMUSG00000050890.16|PDLIM1 interacting kinase 1 like	ENSMUST00000127857.2|Pdik1l|ENSMUSG00000050890.16|PDLIM1 interacting kinase 1 like	ENSMUST00000105876.9|Pdik1l|ENSMUSG00000050890.16|PDLIM1 interacting kinase 1 like
mm39_v1_chr16_+_58548273_58548426	0.287315	AGCUGCC	ENSMUST00000023426.12|Cldnd1|ENSMUSG00000022744.13|claudin domain containing 1	ENSMUST00000162057.8|Cldnd1|ENSMUSG00000022744.13|claudin domain containing 1	ENSMUST00000162191.2|Cldnd1|ENSMUSG00000022744.13|claudin domain containing 1
mm39_v1_chr2_+_145745154_145745214	0.284117	AGCUGCC	ENSMUST00000110000.8|Naa20|ENSMUSG00000002728.15|N(alpha)-acetyltransferase 20, NatB catalytic subunit	ENSMUST00000002805.14|Naa20|ENSMUSG00000002728.15|N(alpha)-acetyltransferase 20, NatB catalytic subunit	ENSMUST00000169732.8|Naa20|ENSMUSG00000002728.15|N(alpha)-acetyltransferase 20, NatB catalytic subunit	ENSMUST00000134759.3|Naa20|ENSMUSG00000002728.15|N(alpha)-acetyltransferase 20, NatB catalytic subunit
mm39_v1_chr11_-_95956176_95956214	0.282453	AGCUGCC	ENSMUST00000100528.5|Ube2z|ENSMUSG00000014349.8|ubiquitin-conjugating enzyme E2Z
mm39_v1_chr2_+_4886298_4886395	0.259718	AGCUGCC	ENSMUST00000027973.14|Sephs1|ENSMUSG00000026662.14|selenophosphate synthetase 1
mm39_v1_chr2_-_62242562_62242581	0.255626	AGCUGCC	ENSMUST00000047812.8|Dpp4|ENSMUSG00000035000.9|dipeptidylpeptidase 4
mm39_v1_chr16_-_17729167_17729228	0.255002	AGCUGCC	ENSMUST00000232423.2|Ess2|ENSMUSG00000003527.10|ess-2 splicing factor	ENSMUST00000003621.10|Ess2|ENSMUSG00000003527.10|ess-2 splicing factor
mm39_v1_chr13_+_24985640_24985640	0.247203	AGCUGCC	ENSMUST00000019276.12|BC005537|ENSMUSG00000019132.12|cDNA sequence BC005537
mm39_v1_chrX_-_149372840_149372858	0.246181	AGCUGCC	ENSMUST00000112725.8|Apex2|ENSMUSG00000025269.17|apurinic/apyrimidinic endonuclease 2	ENSMUST00000112720.8|Apex2|ENSMUSG00000025269.17|apurinic/apyrimidinic endonuclease 2
mm39_v1_chr2_-_167082505_167082534	0.240606	AGCUGCC	ENSMUST00000088041.11|Ptgis|ENSMUSG00000017969.14|prostaglandin I2 (prostacyclin) synthase	ENSMUST00000018113.8|Ptgis|ENSMUSG00000017969.14|prostaglandin I2 (prostacyclin) synthase
mm39_v1_chr1_-_192812509_192812580	0.237549	AGCUGCC	ENSMUST00000085555.7|Utp25|ENSMUSG00000016181.10|UTP25 small subunit processome component
mm39_v1_chr17_+_29833760_29833796	0.230376	AGCUGCC	ENSMUST00000024817.15|Rnf8|ENSMUSG00000090083.12|ring finger protein 8	ENSMUST00000162588.3|Rnf8|ENSMUSG00000090083.12|ring finger protein 8
mm39_v1_chr4_-_129083335_129083387	0.224958	AGCUGCC	ENSMUST00000106061.9|S100pbp|ENSMUSG00000040928.16|S100P binding protein	ENSMUST00000072431.13|S100pbp|ENSMUSG00000040928.16|S100P binding protein
mm39_v1_chr2_+_167774247_167774300	0.216183	AGCUGCC	ENSMUST00000029053.8|Ptpn1|ENSMUSG00000027540.14|protein tyrosine phosphatase, non-receptor type 1
mm39_v1_chr14_+_69266566_69266687	0.204402	AGCUGCC	ENSMUST00000014957.10|Stc1|ENSMUSG00000014813.10|stanniocalcin 1
mm39_v1_chr8_+_106331866_106331944	0.203033	AGCUGCC	ENSMUST00000043531.10|Ripor1|ENSMUSG00000038604.10|RHO family interacting cell polarization regulator 1
mm39_v1_chr15_-_39807081_39807200	0.195849	AGCUGCC	ENSMUST00000022916.13|Lrp12|ENSMUSG00000022305.14|low density lipoprotein-related protein 12
mm39_v1_chr4_+_21848039_21848077	0.195074	AGCUGCC	ENSMUST00000098238.9|Pnisr|ENSMUSG00000028248.16|PNN interacting serine/arginine-rich	ENSMUST00000108229.2|Pnisr|ENSMUSG00000028248.16|PNN interacting serine/arginine-rich
mm39_v1_chr11_+_107438751_107438794	0.192061	AGCUGCC	ENSMUST00000100305.8|Helz|ENSMUSG00000020721.17|helicase with zinc finger domain	ENSMUST00000075012.8|Helz|ENSMUSG00000020721.17|helicase with zinc finger domain	ENSMUST00000106746.8|Helz|ENSMUSG00000020721.17|helicase with zinc finger domain
mm39_v1_chr18_+_61178211_61178278	0.188326	AGCUGCC	ENSMUST00000025522.11|Pdgfrb|ENSMUSG00000024620.12|platelet derived growth factor receptor, beta polypeptide	ENSMUST00000115274.2|Pdgfrb|ENSMUSG00000024620.12|platelet derived growth factor receptor, beta polypeptide
mm39_v1_chr4_+_42949814_42949924	0.184823	AGCUGCC	ENSMUST00000037872.10|Dnajb5|ENSMUSG00000036052.15|DnaJ heat shock protein family (Hsp40) member B5	ENSMUST00000098112.9|Dnajb5|ENSMUSG00000036052.15|DnaJ heat shock protein family (Hsp40) member B5
mm39_v1_chr2_+_109721189_109721226	0.183452	AGCUGCC	ENSMUST00000028583.8|Lin7c|ENSMUSG00000027162.8|lin-7 homolog C (C. elegans)
mm39_v1_chr10_+_95350975_95351043	0.179244	AGCUGCC	ENSMUST00000099329.5|Ube2n|ENSMUSG00000074781.6|ubiquitin-conjugating enzyme E2N
mm39_v1_chr2_+_32460868_32460925	0.177004	AGCUGCC	ENSMUST00000140592.8|Dpm2|ENSMUSG00000026810.13|dolichol-phosphate (beta-D) mannosyltransferase 2	ENSMUST00000028151.7|Dpm2|ENSMUSG00000026810.13|dolichol-phosphate (beta-D) mannosyltransferase 2
mm39_v1_chr8_-_70591799_70591812	0.174224	AGCUGCC	ENSMUST00000075724.9|Rfxank|ENSMUSG00000036120.11|regulatory factor X-associated ankyrin-containing protein
mm39_v1_chr10_-_95399997_95400015	0.170391	AGCUGCC	ENSMUST00000020217.7|Nudt4|ENSMUSG00000020029.7|nudix (nucleoside diphosphate linked moiety X)-type motif 4
mm39_v1_chr2_+_112209548_112209598	0.167213	AGCUGCC	ENSMUST00000028552.4|Katnbl1|ENSMUSG00000027132.4|katanin p80 subunit B like 1
mm39_v1_chr19_+_59446804_59446883	0.164614	AGCUGCC	ENSMUST00000062216.4|Emx2|ENSMUSG00000043969.5|empty spiracles homeobox 2
mm39_v1_chr4_-_25800083_25800146	0.151697	AGCUGCC	ENSMUST00000084770.5|Fut9|ENSMUSG00000055373.9|fucosyltransferase 9
mm39_v1_chr3_-_107240989_107240989	0.149213	AGCUGCC	ENSMUST00000061772.11|Rbm15|ENSMUSG00000048109.11|RNA binding motif protein 15
mm39_v1_chr2_+_121786444_121786498	0.140308	AGCUGCC	ENSMUST00000036647.13|Ctdspl2|ENSMUSG00000033411.17|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm39_v1_chr9_-_25063068_25063136	0.139049	AGCUGCC	ENSMUST00000008573.9|Herpud2|ENSMUSG00000008429.9|HERPUD family member 2
mm39_v1_chr4_-_32923389_32923455	0.132025	AGCUGCC	ENSMUST00000035719.11|Ankrd6|ENSMUSG00000040183.14|ankyrin repeat domain 6
mm39_v1_chr11_-_95200382_95200428	0.125798	AGCUGCC	ENSMUST00000092766.12|Kat7|ENSMUSG00000038909.17|K(lysine) acetyltransferase 7	ENSMUST00000072621.12|Kat7|ENSMUSG00000038909.17|K(lysine) acetyltransferase 7
mm39_v1_chr15_+_97682210_97682370	0.123525	AGCUGCC	ENSMUST00000117892.2|Slc48a1|ENSMUSG00000081534.4|solute carrier family 48 (heme transporter), member 1	ENSMUST00000229084.2|Slc48a1|ENSMUSG00000081534.4|solute carrier family 48 (heme transporter), member 1
mm39_v1_chrX_+_150304137_150304203	0.112814	AGCUGCC	ENSMUST00000112670.8|Phf8|ENSMUSG00000041229.16|PHD finger protein 8	ENSMUST00000046962.11|Phf8|ENSMUSG00000041229.16|PHD finger protein 8	ENSMUST00000112668.9|Phf8|ENSMUSG00000041229.16|PHD finger protein 8	ENSMUST00000046950.13|Phf8|ENSMUSG00000041229.16|PHD finger protein 8
mm39_v1_chr15_-_53765869_53765926	0.101615	AGCUGCC	ENSMUST00000078673.14|Samd12|ENSMUSG00000058656.14|sterile alpha motif domain containing 12
mm39_v1_chr9_+_121589044_121589127	0.0904563	AGCUGCC	ENSMUST00000093772.4|Zfp651|ENSMUSG00000013419.8|zinc finger protein 651
mm39_v1_chr3_-_133250129_133250174	0.0868988	AGCUGCC	ENSMUST00000196398.5|Tet2|ENSMUSG00000040943.13|tet methylcytosine dioxygenase 2	ENSMUST00000098603.8|Tet2|ENSMUSG00000040943.13|tet methylcytosine dioxygenase 2
mm39_v1_chr2_+_5849828_5849880	0.0848034	AGCUGCC	ENSMUST00000026927.10|Nudt5|ENSMUSG00000025817.13|nudix (nucleoside diphosphate linked moiety X)-type motif 5	ENSMUST00000179748.8|Nudt5|ENSMUSG00000025817.13|nudix (nucleoside diphosphate linked moiety X)-type motif 5
mm39_v1_chr5_-_122492223_122492300	0.0813378	AGCUGCC	ENSMUST00000117263.8|Rad9b|ENSMUSG00000038569.14|RAD9 checkpoint clamp component B	ENSMUST00000049009.7|Rad9b|ENSMUSG00000038569.14|RAD9 checkpoint clamp component B
mm39_v1_chr2_-_73044752_73044791	0.0779656	AGCUGCC	ENSMUST00000028517.13|Ola1|ENSMUSG00000027108.16|Obg-like ATPase 1
mm39_v1_chr2_-_160754212_160754264	0.0712115	AGCUGCC	ENSMUST00000109454.8|Emilin3|ENSMUSG00000050700.12|elastin microfibril interfacer 3	ENSMUST00000057169.5|Emilin3|ENSMUSG00000050700.12|elastin microfibril interfacer 3
mm39_v1_chr6_-_72416531_72416548	0.0681927	AGCUGCC	ENSMUST00000205335.2|Mat2a|ENSMUSG00000053907.11|methionine adenosyltransferase II, alpha	ENSMUST00000206692.2|Mat2a|ENSMUSG00000053907.11|methionine adenosyltransferase II, alpha	ENSMUST00000059472.10|Mat2a|ENSMUSG00000053907.11|methionine adenosyltransferase II, alpha
mm39_v1_chr11_-_70578744_70578774	0.0566482	AGCUGCC	ENSMUST00000108545.9|Camta2|ENSMUSG00000040712.17|calmodulin binding transcription activator 2	ENSMUST00000120261.8|Camta2|ENSMUSG00000040712.17|calmodulin binding transcription activator 2
mm39_v1_chr2_-_93841152_93841168	0.0502618	AGCUGCC	ENSMUST00000111240.8|Alkbh3|ENSMUSG00000040174.15|alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase
mm39_v1_chrX_-_71318353_71318409	0.0466192	AGCUGCC	ENSMUST00000064780.4|Gabre|ENSMUSG00000031340.9|gamma-aminobutyric acid (GABA) A receptor, subunit epsilon
mm39_v1_chr1_-_92107971_92108063	0.0452728	AGCUGCC	ENSMUST00000186002.3|Hdac4|ENSMUSG00000026313.17|histone deacetylase 4	ENSMUST00000097644.9|Hdac4|ENSMUSG00000026313.17|histone deacetylase 4
mm39_v1_chr17_+_29879569_29879680	0.0441252	AGCUGCC	ENSMUST00000024816.13|Cmtr1|ENSMUSG00000024019.19|cap methyltransferase 1	ENSMUST00000235031.2|Cmtr1|ENSMUSG00000024019.19|cap methyltransferase 1	ENSMUST00000234911.2|Cmtr1|ENSMUSG00000024019.19|cap methyltransferase 1
mm39_v1_chr10_-_5019044_5019078	0.0398715	AGCUGCC	ENSMUST00000095899.5|Syne1|ENSMUSG00000096054.4|spectrin repeat containing, nuclear envelope 1
mm39_v1_chr5_+_48529671_48529763	0.0394728	AGCUGCC	ENSMUST00000196950.5|5730480H06Rik|ENSMUSG00000029089.9|RIKEN cDNA 5730480H06 gene	ENSMUST00000030968.7|5730480H06Rik|ENSMUSG00000029089.9|RIKEN cDNA 5730480H06 gene
mm39_v1_chr3_+_97808506_97808567	0.0358834	AGCUGCC	ENSMUST00000029476.9|Sec22b|ENSMUSG00000027879.10|SEC22 homolog B, vesicle trafficking protein	ENSMUST00000130620.2|Sec22b|ENSMUSG00000027879.10|SEC22 homolog B, vesicle trafficking protein	ENSMUST00000122288.2|Sec22b|ENSMUSG00000027879.10|SEC22 homolog B, vesicle trafficking protein
mm39_v1_chr14_-_66191177_66191384	0.0323636	AGCUGCC	ENSMUST00000042046.5|Scara3|ENSMUSG00000034463.5|scavenger receptor class A, member 3
mm39_v1_chr2_+_52747855_52747880	0.0311288	AGCUGCC	ENSMUST00000155586.9|Fmnl2|ENSMUSG00000036053.18|formin-like 2	ENSMUST00000090952.11|Fmnl2|ENSMUSG00000036053.18|formin-like 2	ENSMUST00000127122.9|Fmnl2|ENSMUSG00000036053.18|formin-like 2	ENSMUST00000049483.14|Fmnl2|ENSMUSG00000036053.18|formin-like 2	ENSMUST00000050719.13|Fmnl2|ENSMUSG00000036053.18|formin-like 2
mm39_v1_chr10_+_84753480_84753520	0.0291618	AGCUGCC	ENSMUST00000038523.15|Ric8b|ENSMUSG00000035620.16|RIC8 guanine nucleotide exchange factor B	ENSMUST00000214693.2|Ric8b|ENSMUSG00000035620.16|RIC8 guanine nucleotide exchange factor B	ENSMUST00000095385.5|Ric8b|ENSMUSG00000035620.16|RIC8 guanine nucleotide exchange factor B
mm39_v1_chr7_+_127441119_127441140	0.0277514	AGCUGCC	ENSMUST00000121705.8|Stx4a|ENSMUSG00000030805.15|syntaxin 4A (placental)
mm39_v1_chr6_+_54793894_54793905	0.0124902	AGCUGCC	ENSMUST00000079869.13|Znrf2|ENSMUSG00000058446.15|zinc and ring finger 2
mm39_v1_chr12_+_83810402_83810423	0.0106318	AGCUGCC	ENSMUST00000121733.8|Papln|ENSMUSG00000021223.14|papilin, proteoglycan-like sulfated glycoprotein
mm39_v1_chr2_-_122441719_122441784	0.00932031	AGCUGCC	ENSMUST00000028624.9|Gatm|ENSMUSG00000027199.15|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
mm39_v1_chr12_-_4527138_4527196	0.00631287	AGCUGCC	ENSMUST00000085814.5|Ncoa1|ENSMUSG00000020647.11|nuclear receptor coactivator 1
mm39_v1_chr4_+_47353217_47353226	0.00410972	AGCUGCC	ENSMUST00000007757.15|Tgfbr1|ENSMUSG00000007613.16|transforming growth factor, beta receptor I
mm39_v1_chr9_+_121946321_121946401	0.00347911	AGCUGCC	ENSMUST00000119215.9|Snrk|ENSMUSG00000038145.18|SNF related kinase	ENSMUST00000146832.8|Snrk|ENSMUSG00000038145.18|SNF related kinase	ENSMUST00000118886.9|Snrk|ENSMUSG00000038145.18|SNF related kinase	ENSMUST00000120173.9|Snrk|ENSMUSG00000038145.18|SNF related kinase	ENSMUST00000139181.2|Snrk|ENSMUSG00000038145.18|SNF related kinase
mm39_v1_chr4_+_43578707_43578772	0.00237152	AGCUGCC	ENSMUST00000107886.9|Rgp1|ENSMUSG00000028468.16|RAB6A GEF compex partner 1	ENSMUST00000117140.8|Rgp1|ENSMUSG00000028468.16|RAB6A GEF compex partner 1
