mm39_v1_chr8_+_57774010_57774027	4.99419	AGUGGUU	ENSMUST00000040104.5|Hand2|ENSMUSG00000038193.5|heart and neural crest derivatives expressed 2
mm39_v1_chr18_-_43870622_43870629	3.97237	AGUGGUU	ENSMUST00000025381.4|Spink1|ENSMUSG00000024503.4|serine peptidase inhibitor, Kazal type 1
mm39_v1_chr2_-_125348305_125348328	3.93768	AGUGGUU	ENSMUST00000028633.13|Fbn1|ENSMUSG00000027204.14|fibrillin 1
mm39_v1_chr13_-_29137673_29137696	3.80051	AGUGGUU	ENSMUST00000067230.6|Sox4|ENSMUSG00000076431.5|SRY (sex determining region Y)-box 4
mm39_v1_chr1_-_72914036_72914050	3.44438	AGUGGUU	ENSMUST00000027377.9|Igfbp5|ENSMUSG00000026185.9|insulin-like growth factor binding protein 5
mm39_v1_chr3_-_19365431_19365486	3.33103	AGUGGUU	ENSMUST00000099195.10|Pde7a|ENSMUSG00000069094.13|phosphodiesterase 7A
mm39_v1_chr7_+_112278520_112278532	3.08537	AGUGGUU	ENSMUST00000084705.13|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000239442.2|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000239404.2|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000059768.18|Tead1|ENSMUSG00000055320.19|TEA domain family member 1
mm39_v1_chr2_-_136958544_136958564	2.96094	AGUGGUU	ENSMUST00000028735.8|Jag1|ENSMUSG00000027276.8|jagged 1
mm39_v1_chr4_+_99952988_99953064	2.90138	AGUGGUU	ENSMUST00000039630.6|Ror1|ENSMUSG00000035305.6|receptor tyrosine kinase-like orphan receptor 1
mm39_v1_chr3_+_151143524_151143551	2.64044	AGUGGUU	ENSMUST00000046977.12|Adgrl4|ENSMUSG00000039167.13|adhesion G protein-coupled receptor L4
mm39_v1_chrX_+_158038778_158038894	2.51617	AGUGGUU	ENSMUST00000126686.8|Rps6ka3|ENSMUSG00000031309.16|ribosomal protein S6 kinase polypeptide 3	ENSMUST00000033671.13|Rps6ka3|ENSMUSG00000031309.16|ribosomal protein S6 kinase polypeptide 3
mm39_v1_chr4_+_57637817_57637845	2.46745	AGUGGUU	ENSMUST00000150412.4|Pakap|ENSMUSG00000089945.14|paralemmin A kinase anchor protein
mm39_v1_chr15_-_97729341_97729393	2.42716	AGUGGUU	ENSMUST00000079838.14|Hdac7|ENSMUSG00000022475.20|histone deacetylase 7	ENSMUST00000118294.8|Hdac7|ENSMUSG00000022475.20|histone deacetylase 7
mm39_v1_chr2_-_75534985_75535023	2.27889	AGUGGUU	ENSMUST00000102672.5|Nfe2l2|ENSMUSG00000015839.7|nuclear factor, erythroid derived 2, like 2
mm39_v1_chr13_+_5911481_5911521	2.26413	AGUGGUU	ENSMUST00000000080.8|Klf6|ENSMUSG00000000078.8|Kruppel-like factor 6
mm39_v1_chr9_-_108141105_108141161	2.26288	AGUGGUU	ENSMUST00000166905.8|Dag1|ENSMUSG00000039952.16|dystroglycan 1	ENSMUST00000191899.6|Dag1|ENSMUSG00000039952.16|dystroglycan 1
mm39_v1_chr16_+_87495792_87495872	2.2568	AGUGGUU	ENSMUST00000026703.6|Bach1|ENSMUSG00000025612.6|BTB and CNC homology 1, basic leucine zipper transcription factor 1
mm39_v1_chr10_-_117681864_117681940	2.24949	AGUGGUU	ENSMUST00000064667.9|Rap1b|ENSMUSG00000052681.9|RAS related protein 1b
mm39_v1_chr7_+_98484311_98484338	2.19574	AGUGGUU	ENSMUST00000165122.8|Wnt11|ENSMUSG00000015957.13|wingless-type MMTV integration site family, member 11	ENSMUST00000067495.9|Wnt11|ENSMUSG00000015957.13|wingless-type MMTV integration site family, member 11
mm39_v1_chr15_-_77726333_77726375	2.1654	AGUGGUU	ENSMUST00000016771.13|Myh9|ENSMUSG00000022443.18|myosin, heavy polypeptide 9, non-muscle
mm39_v1_chr9_+_7764042_7764179	2.15091	AGUGGUU	ENSMUST00000052865.16|Tmem123|ENSMUSG00000050912.16|transmembrane protein 123
mm39_v1_chr11_+_95603494_95603529	2.12975	AGUGGUU	ENSMUST00000107717.8|Zfp652|ENSMUSG00000075595.10|zinc finger protein 652
mm39_v1_chr7_-_89166781_89166796	2.11672	AGUGGUU	ENSMUST00000041761.7|Prss23|ENSMUSG00000039405.8|protease, serine 23
mm39_v1_chr5_+_75312939_75312967	2.10295	AGUGGUU	ENSMUST00000202681.4|Pdgfra|ENSMUSG00000029231.16|platelet derived growth factor receptor, alpha polypeptide	ENSMUST00000000476.15|Pdgfra|ENSMUSG00000029231.16|platelet derived growth factor receptor, alpha polypeptide
mm39_v1_chr19_-_6065872_6065927	2.04861	AGUGGUU	ENSMUST00000164843.10|Capn1|ENSMUSG00000024942.20|calpain 1
mm39_v1_chr7_+_45084257_45084295	2.00493	AGUGGUU	ENSMUST00000003964.17|Gys1|ENSMUSG00000003865.17|glycogen synthase 1, muscle
mm39_v1_chr11_+_87959067_87959115	1.93895	AGUGGUU	ENSMUST00000018521.11|Vezf1|ENSMUSG00000018377.11|vascular endothelial zinc finger 1
mm39_v1_chr13_+_13612136_13612136	1.93549	AGUGGUU	ENSMUST00000005532.9|Nid1|ENSMUSG00000005397.9|nidogen 1
mm39_v1_chr10_+_44943262_44943375	1.89369	AGUGGUU	ENSMUST00000099858.4|Prep|ENSMUSG00000019849.12|prolyl endopeptidase
mm39_v1_chr15_-_98505508_98505519	1.87295	AGUGGUU	ENSMUST00000096224.6|Adcy6|ENSMUSG00000022994.10|adenylate cyclase 6
mm39_v1_chr11_-_62539284_62539349	1.77355	AGUGGUU	ENSMUST00000057194.9|Lrrc75a|ENSMUSG00000046417.15|leucine rich repeat containing 75A
mm39_v1_chr9_-_85209162_85209183	1.74459	AGUGGUU	ENSMUST00000034802.15|Tent5a|ENSMUSG00000032265.15|terminal nucleotidyltransferase 5A
mm39_v1_chr6_+_91661034_91661058	1.73721	AGUGGUU	ENSMUST00000032185.9|Slc6a6|ENSMUSG00000030096.9|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
mm39_v1_chr1_+_93406686_93406783	1.70803	AGUGGUU	ENSMUST00000027495.15|Septin2|ENSMUSG00000026276.21|septin 2	ENSMUST00000136182.8|Septin2|ENSMUSG00000026276.21|septin 2	ENSMUST00000131175.9|Septin2|ENSMUSG00000026276.21|septin 2	ENSMUST00000179353.8|Septin2|ENSMUSG00000116048.2|septin 2	ENSMUST00000172165.8|Septin2|ENSMUSG00000116048.2|septin 2	ENSMUST00000153826.8|Septin2|ENSMUSG00000026276.21|septin 2	ENSMUST00000129211.8|Septin2|ENSMUSG00000026276.21|septin 2	ENSMUST00000168776.8|Septin2|ENSMUSG00000116048.2|septin 2
mm39_v1_chr4_+_57845240_57845265	1.65144	AGUGGUU	ENSMUST00000102903.8|Pakap|ENSMUSG00000038729.25|paralemmin A kinase anchor protein	ENSMUST00000107598.9|Pakap|ENSMUSG00000038729.25|paralemmin A kinase anchor protein
mm39_v1_chr19_+_41471067_41471128	1.6126	AGUGGUU	ENSMUST00000067795.13|Lcor|ENSMUSG00000025019.18|ligand dependent nuclear receptor corepressor
mm39_v1_chr4_-_59549314_59549364	1.61154	AGUGGUU	ENSMUST00000148331.9|Ptbp3|ENSMUSG00000028382.16|polypyrimidine tract binding protein 3	ENSMUST00000030076.12|Ptbp3|ENSMUSG00000028382.16|polypyrimidine tract binding protein 3
mm39_v1_chr13_+_104424359_104424432	1.54769	AGUGGUU	ENSMUST00000065766.7|Adamts6|ENSMUSG00000046169.11|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
mm39_v1_chr4_-_148021217_148021226	1.53166	AGUGGUU	ENSMUST00000019199.14|Plod1|ENSMUSG00000019055.16|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
mm39_v1_chr3_-_115800989_115801060	1.50931	AGUGGUU	ENSMUST00000067485.4|Slc30a7|ENSMUSG00000054414.5|solute carrier family 30 (zinc transporter), member 7
mm39_v1_chr3_-_144275897_144275989	1.47796	AGUGGUU	ENSMUST00000043325.9|Hs2st1|ENSMUSG00000040151.10|heparan sulfate 2-O-sulfotransferase 1
mm39_v1_chr14_-_6104568_6104592	1.45715	AGUGGUU	ENSMUST00000017629.12|Top2b|ENSMUSG00000017485.12|topoisomerase (DNA) II beta
mm39_v1_chr2_+_133394079_133394157	1.44715	AGUGGUU	ENSMUST00000028836.7|Bmp2|ENSMUSG00000027358.7|bone morphogenetic protein 2
mm39_v1_chr16_-_85698679_85698716	1.39991	AGUGGUU	ENSMUST00000023611.7|Adamts5|ENSMUSG00000022894.7|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm39_v1_chr17_+_53873964_53874050	1.35405	AGUGGUU	ENSMUST00000000724.15|Kat2b|ENSMUSG00000000708.15|K(lysine) acetyltransferase 2B
mm39_v1_chr9_-_101128976_101129003	1.34864	AGUGGUU	ENSMUST00000075941.12|Ppp2r3a|ENSMUSG00000043154.16|protein phosphatase 2, regulatory subunit B'', alpha
mm39_v1_chr18_+_56840813_56841028	1.32858	AGUGGUU	ENSMUST00000025486.9|Lmnb1|ENSMUSG00000024590.9|lamin B1
mm39_v1_chr11_+_59197746_59197761	1.32552	AGUGGUU	ENSMUST00000000128.10|Wnt9a|ENSMUSG00000000126.12|wingless-type MMTV integration site family, member 9A	ENSMUST00000108783.4|Wnt9a|ENSMUSG00000000126.12|wingless-type MMTV integration site family, member 9A
mm39_v1_chr13_-_104057016_104057075	1.30248	AGUGGUU	ENSMUST00000022222.12|Erbin|ENSMUSG00000021709.15|Erbb2 interacting protein
mm39_v1_chr10_-_13350106_13350185	1.27403	AGUGGUU	ENSMUST00000105545.12|Phactr2|ENSMUSG00000062866.17|phosphatase and actin regulator 2
mm39_v1_chr12_+_80837284_80837348	1.24868	AGUGGUU	ENSMUST00000220238.2|Susd6|ENSMUSG00000021133.10|sushi domain containing 6	ENSMUST00000068519.7|Susd6|ENSMUSG00000021133.10|sushi domain containing 6
mm39_v1_chr3_-_97134680_97134738	1.21389	AGUGGUU	ENSMUST00000046521.14|Bcl9|ENSMUSG00000038256.16|B cell CLL/lymphoma 9
mm39_v1_chr17_+_74835290_74835369	1.19521	AGUGGUU	ENSMUST00000180037.8|Birc6|ENSMUSG00000024073.17|baculoviral IAP repeat-containing 6
mm39_v1_chr9_+_72439496_72439553	1.1625	AGUGGUU	ENSMUST00000163401.9|Rfx7|ENSMUSG00000037674.16|regulatory factor X, 7	ENSMUST00000093820.10|Rfx7|ENSMUSG00000037674.16|regulatory factor X, 7
mm39_v1_chr5_+_122422428_122422461	1.15499	AGUGGUU	ENSMUST00000053426.15|Pptc7|ENSMUSG00000038582.16|PTC7 protein phosphatase homolog
mm39_v1_chr2_-_91854844_91854847	1.15196	AGUGGUU	ENSMUST00000028663.5|Creb3l1|ENSMUSG00000027230.10|cAMP responsive element binding protein 3-like 1
mm39_v1_chr1_+_12762501_12762590	1.07237	AGUGGUU	ENSMUST00000177608.8|Sulf1|ENSMUSG00000016918.16|sulfatase 1	ENSMUST00000180062.8|Sulf1|ENSMUSG00000016918.16|sulfatase 1
mm39_v1_chr9_+_83716736_83716819	1.05446	AGUGGUU	ENSMUST00000185913.7|Ttk|ENSMUSG00000038379.16|Ttk protein kinase	ENSMUST00000070326.14|Ttk|ENSMUSG00000038379.16|Ttk protein kinase	ENSMUST00000191484.2|Ttk|ENSMUSG00000038379.16|Ttk protein kinase
mm39_v1_chr13_+_111822712_111822745	1.05201	AGUGGUU	ENSMUST00000109272.9|Mier3|ENSMUSG00000032727.15|MIER family member 3
mm39_v1_chr5_+_32768515_32768589	1.03645	AGUGGUU	ENSMUST00000202543.4|Yes1|ENSMUSG00000014932.16|YES proto-oncogene 1, Src family tyrosine kinase	ENSMUST00000072311.13|Yes1|ENSMUSG00000014932.16|YES proto-oncogene 1, Src family tyrosine kinase
mm39_v1_chr12_+_104998895_104998964	0.994639	AGUGGUU	ENSMUST00000223244.2|Glrx5|ENSMUSG00000021102.5|glutaredoxin 5	ENSMUST00000021522.5|Glrx5|ENSMUSG00000021102.5|glutaredoxin 5
mm39_v1_chr9_-_57552844_57552955	0.982358	AGUGGUU	ENSMUST00000216979.2|Csk|ENSMUSG00000032312.8|c-src tyrosine kinase	ENSMUST00000034863.8|Csk|ENSMUSG00000032312.8|c-src tyrosine kinase
mm39_v1_chr12_-_21467437_21467638	0.981235	AGUGGUU	ENSMUST00000103002.8|Ywhaq|ENSMUSG00000076432.14|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta	ENSMUST00000155480.9|Ywhaq|ENSMUSG00000076432.14|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta	ENSMUST00000135088.9|Ywhaq|ENSMUSG00000076432.14|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta
mm39_v1_chr4_-_123236596_123236711	0.979271	AGUGGUU	ENSMUST00000102641.10|Bmp8a|ENSMUSG00000032726.13|bone morphogenetic protein 8a
mm39_v1_chr4_+_47353217_47353226	0.950212	AGUGGUU	ENSMUST00000007757.15|Tgfbr1|ENSMUSG00000007613.16|transforming growth factor, beta receptor I
mm39_v1_chr15_-_11905697_11905760	0.946551	AGUGGUU	ENSMUST00000066529.5|Npr3|ENSMUSG00000022206.8|natriuretic peptide receptor 3	ENSMUST00000228603.2|Npr3|ENSMUSG00000022206.8|natriuretic peptide receptor 3
mm39_v1_chr2_-_59955995_59956119	0.90246	AGUGGUU	ENSMUST00000112550.8|Baz2b|ENSMUSG00000026987.17|bromodomain adjacent to zinc finger domain, 2B
mm39_v1_chr5_+_92957231_92957295	0.84055	AGUGGUU	ENSMUST00000113054.9|Shroom3|ENSMUSG00000029381.17|shroom family member 3
mm39_v1_chr3_+_146205562_146205645	0.838524	AGUGGUU	ENSMUST00000090031.12|Gng5|ENSMUSG00000068523.13|guanine nucleotide binding protein (G protein), gamma 5	ENSMUST00000118280.2|Gng5|ENSMUSG00000068523.13|guanine nucleotide binding protein (G protein), gamma 5
mm39_v1_chr14_+_20979466_20979519	0.814049	AGUGGUU	ENSMUST00000022369.9|Vcl|ENSMUSG00000021823.11|vinculin
mm39_v1_chr11_-_47270201_47270349	0.81034	AGUGGUU	ENSMUST00000077221.6|Sgcd|ENSMUSG00000020354.16|sarcoglycan, delta (dystrophin-associated glycoprotein)
mm39_v1_chr5_-_143513732_143513791	0.792304	AGUGGUU	ENSMUST00000100489.4|Rac1|ENSMUSG00000001847.15|Rac family small GTPase 1	ENSMUST00000080537.14|Rac1|ENSMUSG00000001847.15|Rac family small GTPase 1
mm39_v1_chr14_+_48683797_48683886	0.781261	AGUGGUU	ENSMUST00000111735.10|Tmem260|ENSMUSG00000036339.19|transmembrane protein 260
mm39_v1_chr5_+_97145533_97145625	0.768189	AGUGGUU	ENSMUST00000112974.6|Bmp2k|ENSMUSG00000034663.14|BMP2 inducible kinase	ENSMUST00000035635.10|Bmp2k|ENSMUSG00000034663.14|BMP2 inducible kinase
mm39_v1_chr11_+_101151394_101151451	0.741504	AGUGGUU	ENSMUST00000103108.8|Wnk4|ENSMUSG00000035112.18|WNK lysine deficient protein kinase 4
mm39_v1_chr17_+_88748139_88748217	0.735748	AGUGGUU	ENSMUST00000112238.9|Foxn2|ENSMUSG00000034998.19|forkhead box N2	ENSMUST00000155640.2|Foxn2|ENSMUSG00000034998.19|forkhead box N2
mm39_v1_chr9_+_20563386_20563401	0.732284	AGUGGUU	ENSMUST00000034689.8|Pin1|ENSMUSG00000032171.8|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1
mm39_v1_chr3_+_101284391_101284421	0.724226	AGUGGUU	ENSMUST00000043983.11|Igsf3|ENSMUSG00000042035.12|immunoglobulin superfamily, member 3
mm39_v1_chr15_+_73594965_73595001	0.716469	AGUGGUU	ENSMUST00000165541.8|Ptp4a3|ENSMUSG00000059895.14|protein tyrosine phosphatase 4a3	ENSMUST00000167582.8|Ptp4a3|ENSMUSG00000059895.14|protein tyrosine phosphatase 4a3
mm39_v1_chr15_-_96597610_96597617	0.714827	AGUGGUU	ENSMUST00000023099.8|Slc38a2|ENSMUSG00000022462.8|solute carrier family 38, member 2
mm39_v1_chr10_+_25235696_25235742	0.712697	AGUGGUU	ENSMUST00000053748.16|Epb41l2|ENSMUSG00000019978.17|erythrocyte membrane protein band 4.1 like 2
mm39_v1_chrX_+_139565657_139565821	0.711584	AGUGGUU	ENSMUST00000112990.8|Mid2|ENSMUSG00000000266.12|midline 2	ENSMUST00000112988.8|Mid2|ENSMUSG00000000266.12|midline 2
mm39_v1_chr9_-_75466885_75466946	0.67842	AGUGGUU	ENSMUST00000072232.9|Tmod3|ENSMUSG00000058587.10|tropomodulin 3
mm39_v1_chr6_-_34854941_34855013	0.676571	AGUGGUU	ENSMUST00000115006.2|Cyren|ENSMUSG00000046806.14|cell cycle regulator of NHEJ	ENSMUST00000055097.11|Cyren|ENSMUSG00000046806.14|cell cycle regulator of NHEJ	ENSMUST00000115007.9|Cyren|ENSMUSG00000046806.14|cell cycle regulator of NHEJ
mm39_v1_chr9_+_74860335_74860374	0.674949	AGUGGUU	ENSMUST00000170846.8|Fam214a|ENSMUSG00000034858.17|family with sequence similarity 214, member A
mm39_v1_chr4_-_99717359_99717428	0.674383	AGUGGUU	ENSMUST00000146258.2|Itgb3bp|ENSMUSG00000028549.18|integrin beta 3 binding protein (beta3-endonexin)
mm39_v1_chr13_+_81805941_81805965	0.652562	AGUGGUU	ENSMUST00000049055.8|Lysmd3|ENSMUSG00000035840.8|LysM, putative peptidoglycan-binding, domain containing 3
mm39_v1_chr16_-_45664664_45664744	0.649937	AGUGGUU	ENSMUST00000036355.13|Phldb2|ENSMUSG00000033149.18|pleckstrin homology like domain, family B, member 2
mm39_v1_chr10_+_128212953_128213024	0.634259	AGUGGUU	ENSMUST00000014642.10|Ankrd52|ENSMUSG00000014498.10|ankyrin repeat domain 52
mm39_v1_chr8_-_87472562_87472682	0.601598	AGUGGUU	ENSMUST00000045296.6|Siah1a|ENSMUSG00000036840.6|siah E3 ubiquitin protein ligase 1A
mm39_v1_chr17_-_16046780_16046853	0.601395	AGUGGUU	ENSMUST00000232638.2|Rgmb|ENSMUSG00000048027.10|repulsive guidance molecule family member B	ENSMUST00000170578.3|Rgmb|ENSMUSG00000048027.10|repulsive guidance molecule family member B
mm39_v1_chr4_-_41275091_41275144	0.594109	AGUGGUU	ENSMUST00000030143.13|Ubap2|ENSMUSG00000028433.15|ubiquitin-associated protein 2	ENSMUST00000108068.8|Ubap2|ENSMUSG00000028433.15|ubiquitin-associated protein 2
mm39_v1_chr7_-_65020955_65021041	0.593341	AGUGGUU	ENSMUST00000102592.10|Tjp1|ENSMUSG00000030516.15|tight junction protein 1
mm39_v1_chr3_+_128993568_128993591	0.590657	AGUGGUU	ENSMUST00000029657.16|Pitx2|ENSMUSG00000028023.17|paired-like homeodomain transcription factor 2	ENSMUST00000106382.11|Pitx2|ENSMUSG00000028023.17|paired-like homeodomain transcription factor 2
mm39_v1_chr12_+_71877838_71877948	0.590359	AGUGGUU	ENSMUST00000223272.2|Daam1|ENSMUSG00000034574.11|dishevelled associated activator of morphogenesis 1	ENSMUST00000085299.4|Daam1|ENSMUSG00000034574.11|dishevelled associated activator of morphogenesis 1
mm39_v1_chr2_+_76236870_76236936	0.579185	AGUGGUU	ENSMUST00000077972.11|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6	ENSMUST00000111929.8|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6	ENSMUST00000111930.9|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6
mm39_v1_chr6_+_142332941_142333017	0.576403	AGUGGUU	ENSMUST00000032372.7|Golt1b|ENSMUSG00000030245.11|golgi transport 1B
mm39_v1_chr3_+_145827410_145827438	0.551678	AGUGGUU	ENSMUST00000039450.5|Mcoln3|ENSMUSG00000036853.6|mucolipin 3
mm39_v1_chr12_+_56742413_56742459	0.54916	AGUGGUU	ENSMUST00000001538.10|Pax9|ENSMUSG00000001497.19|paired box 9
mm39_v1_chr9_+_77824646_77824668	0.542699	AGUGGUU	ENSMUST00000034904.14|Elovl5|ENSMUSG00000032349.14|ELOVL family member 5, elongation of long chain fatty acids (yeast)
mm39_v1_chr1_+_131838294_131838310	0.521222	AGUGGUU	ENSMUST00000062264.8|Nucks1|ENSMUSG00000026434.13|nuclear casein kinase and cyclin-dependent kinase substrate 1
mm39_v1_chr2_+_31042328_31042372	0.519065	AGUGGUU	ENSMUST00000056433.7|Gpr107|ENSMUSG00000000194.14|G protein-coupled receptor 107
mm39_v1_chr16_-_76170714_76170741	0.493764	AGUGGUU	ENSMUST00000231585.2|Nrip1|ENSMUSG00000048490.15|nuclear receptor interacting protein 1	ENSMUST00000121927.8|Nrip1|ENSMUSG00000048490.15|nuclear receptor interacting protein 1
mm39_v1_chr8_+_36054919_36054981	0.491822	AGUGGUU	ENSMUST00000037666.6|Mfhas1|ENSMUSG00000070056.7|malignant fibrous histiocytoma amplified sequence 1
mm39_v1_chr7_-_119494918_119494975	0.485856	AGUGGUU	ENSMUST00000059851.14|Dcun1d3|ENSMUSG00000048787.14|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm39_v1_chr11_-_48717482_48717574	0.451603	AGUGGUU	ENSMUST00000104959.2|Gm12184|ENSMUSG00000078154.4|predicted gene 12184
mm39_v1_chr18_+_5591864_5591902	0.451216	AGUGGUU	ENSMUST00000025081.13|Zeb1|ENSMUSG00000024238.16|zinc finger E-box binding homeobox 1	ENSMUST00000159390.8|Zeb1|ENSMUSG00000024238.16|zinc finger E-box binding homeobox 1
mm39_v1_chr19_+_29499671_29499682	0.444352	AGUGGUU	ENSMUST00000043610.13|Ric1|ENSMUSG00000038658.16|RAB6A GEF complex partner 1
mm39_v1_chr18_+_53309388_53309448	0.434326	AGUGGUU	ENSMUST00000037850.7|Snx2|ENSMUSG00000034484.9|sorting nexin 2
mm39_v1_chr8_+_106363141_106363221	0.427142	AGUGGUU	ENSMUST00000005841.16|Ctcf|ENSMUSG00000005698.16|CCCTC-binding factor
mm39_v1_chr11_+_49141339_49141405	0.424986	AGUGGUU	ENSMUST00000101293.11|Mgat1|ENSMUSG00000020346.17|mannoside acetylglucosaminyltransferase 1
mm39_v1_chr3_+_9315662_9315662	0.422023	AGUGGUU	ENSMUST00000155203.2|Zbtb10|ENSMUSG00000069114.9|zinc finger and BTB domain containing 10
mm39_v1_chr4_-_53159885_53159900	0.403523	AGUGGUU	ENSMUST00000030010.4|Abca1|ENSMUSG00000015243.5|ATP-binding cassette, sub-family A (ABC1), member 1
mm39_v1_chr9_-_106666329_106666408	0.395288	AGUGGUU	ENSMUST00000046502.7|Rad54l2|ENSMUSG00000040661.7|RAD54 like 2 (S. cerevisiae)
mm39_v1_chr6_+_29348068_29348123	0.3945	AGUGGUU	ENSMUST00000173216.8|Calu|ENSMUSG00000029767.17|calumenin	ENSMUST00000173694.5|Calu|ENSMUSG00000029767.17|calumenin	ENSMUST00000172974.8|Calu|ENSMUSG00000029767.17|calumenin	ENSMUST00000031779.17|Calu|ENSMUSG00000029767.17|calumenin	ENSMUST00000090481.14|Calu|ENSMUSG00000029767.17|calumenin
mm39_v1_chr13_-_18118736_18118824	0.381588	AGUGGUU	ENSMUST00000009003.9|Rala|ENSMUSG00000008859.9|v-ral simian leukemia viral oncogene A (ras related)
mm39_v1_chr6_+_14901343_14901363	0.372945	AGUGGUU	ENSMUST00000115477.8|Foxp2|ENSMUSG00000029563.17|forkhead box P2
mm39_v1_chr8_-_103512274_103512408	0.363191	AGUGGUU	ENSMUST00000075190.5|Cdh11|ENSMUSG00000031673.7|cadherin 11
mm39_v1_chr10_-_30476658_30476745	0.353811	AGUGGUU	ENSMUST00000019927.7|Trmt11|ENSMUSG00000019792.9|tRNA methyltransferase 11
mm39_v1_chr19_+_46587523_46587617	0.339075	AGUGGUU	ENSMUST00000138302.9|Wbp1l|ENSMUSG00000047731.18|WW domain binding protein 1 like	ENSMUST00000099376.11|Wbp1l|ENSMUSG00000047731.18|WW domain binding protein 1 like
mm39_v1_chr15_-_51855073_51855159	0.338876	AGUGGUU	ENSMUST00000022927.11|Rad21|ENSMUSG00000022314.11|RAD21 cohesin complex component
mm39_v1_chr11_-_86248395_86248442	0.334881	AGUGGUU	ENSMUST00000043624.9|Med13|ENSMUSG00000034297.15|mediator complex subunit 13
mm39_v1_chr7_-_110682204_110682244	0.328788	AGUGGUU	ENSMUST00000161051.8|Eif4g2|ENSMUSG00000005610.18|eukaryotic translation initiation factor 4, gamma 2	ENSMUST00000160132.8|Eif4g2|ENSMUSG00000005610.18|eukaryotic translation initiation factor 4, gamma 2	ENSMUST00000162415.9|Eif4g2|ENSMUSG00000005610.18|eukaryotic translation initiation factor 4, gamma 2
mm39_v1_chr1_-_80318197_80318229	0.324112	AGUGGUU	ENSMUST00000163119.8|Cul3|ENSMUSG00000004364.15|cullin 3
mm39_v1_chr2_+_152873772_152873939	0.31765	AGUGGUU	ENSMUST00000037235.7|Xkr7|ENSMUSG00000042631.8|X-linked Kx blood group related 7
mm39_v1_chr16_-_46317318_46317349	0.305273	AGUGGUU	ENSMUST00000023335.13|Nectin3|ENSMUSG00000022656.16|nectin cell adhesion molecule 3	ENSMUST00000023334.15|Nectin3|ENSMUSG00000022656.16|nectin cell adhesion molecule 3
mm39_v1_chr8_-_25506756_25506892	0.301758	AGUGGUU	ENSMUST00000084032.6|Adam9|ENSMUSG00000031555.16|a disintegrin and metallopeptidase domain 9 (meltrin gamma)	ENSMUST00000207132.2|Adam9|ENSMUSG00000031555.16|a disintegrin and metallopeptidase domain 9 (meltrin gamma)
mm39_v1_chr3_+_32583602_32583676	0.299942	AGUGGUU	ENSMUST00000091257.11|Mfn1|ENSMUSG00000027668.14|mitofusin 1
mm39_v1_chr12_-_69245191_69245203	0.278953	AGUGGUU	ENSMUST00000021356.6|Dnaaf2|ENSMUSG00000020973.8|dynein, axonemal assembly factor 2
mm39_v1_chr1_+_160733942_160734030	0.277712	AGUGGUU	ENSMUST00000161609.8|Rc3h1|ENSMUSG00000040423.12|RING CCCH (C3H) domains 1
mm39_v1_chr8_+_108020092_108020118	0.267214	AGUGGUU	ENSMUST00000169453.8|Nfat5|ENSMUSG00000003847.17|nuclear factor of activated T cells 5
mm39_v1_chr18_-_38734389_38734468	0.266235	AGUGGUU	ENSMUST00000025295.8|Spry4|ENSMUSG00000024427.8|sprouty RTK signaling antagonist 4
mm39_v1_chr5_+_63969706_63969891	0.266158	AGUGGUU	ENSMUST00000081747.8|0610040J01Rik|ENSMUSG00000060512.8|RIKEN cDNA 0610040J01 gene	ENSMUST00000196575.5|0610040J01Rik|ENSMUSG00000060512.8|RIKEN cDNA 0610040J01 gene
mm39_v1_chr10_+_62756409_62756425	0.245301	AGUGGUU	ENSMUST00000044977.10|Slc25a16|ENSMUSG00000071253.9|solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16
mm39_v1_chr3_+_102377234_102377251	0.244957	AGUGGUU	ENSMUST00000035952.5|Ngf|ENSMUSG00000027859.11|nerve growth factor	ENSMUST00000198168.5|Ngf|ENSMUSG00000027859.11|nerve growth factor	ENSMUST00000106925.9|Ngf|ENSMUSG00000027859.11|nerve growth factor
mm39_v1_chr6_-_13677928_13677974	0.244718	AGUGGUU	ENSMUST00000203078.2|Bmt2|ENSMUSG00000042742.8|base methyltransferase of 25S rRNA 2	ENSMUST00000045235.8|Bmt2|ENSMUSG00000042742.8|base methyltransferase of 25S rRNA 2
mm39_v1_chr13_+_15638466_15638565	0.242553	AGUGGUU	ENSMUST00000110510.4|Gli3|ENSMUSG00000021318.16|GLI-Kruppel family member GLI3
mm39_v1_chr7_+_67602565_67602576	0.23749	AGUGGUU	ENSMUST00000005671.10|Igf1r|ENSMUSG00000005533.11|insulin-like growth factor I receptor
mm39_v1_chr14_-_31923803_31923867	0.235288	AGUGGUU	ENSMUST00000226683.2|Timm23|ENSMUSG00000013701.14|translocase of inner mitochondrial membrane 23	ENSMUST00000170331.8|Timm23|ENSMUSG00000013701.14|translocase of inner mitochondrial membrane 23	ENSMUST00000013845.13|Timm23|ENSMUSG00000013701.14|translocase of inner mitochondrial membrane 23
mm39_v1_chr13_-_100969878_100969978	0.233331	AGUGGUU	ENSMUST00000067246.6|Slc30a5|ENSMUSG00000021629.11|solute carrier family 30 (zinc transporter), member 5
mm39_v1_chr11_-_78642480_78642555	0.22851	AGUGGUU	ENSMUST00000059468.6|Ccnq|ENSMUSG00000049489.6|cyclin Q
mm39_v1_chr2_-_119039247_119039283	0.218734	AGUGGUU	ENSMUST00000038439.4|Dnajc17|ENSMUSG00000034278.4|DnaJ heat shock protein family (Hsp40) member C17
mm39_v1_chr12_-_51738666_51738738	0.192208	AGUGGUU	ENSMUST00000013130.15|Strn3|ENSMUSG00000020954.17|striatin, calmodulin binding protein 3	ENSMUST00000169503.4|Strn3|ENSMUSG00000020954.17|striatin, calmodulin binding protein 3
mm39_v1_chr17_-_25493273_25493291	0.191689	AGUGGUU	ENSMUST00000172587.8|Ube2i|ENSMUSG00000015120.16|ubiquitin-conjugating enzyme E2I	ENSMUST00000049911.16|Ube2i|ENSMUSG00000015120.16|ubiquitin-conjugating enzyme E2I	ENSMUST00000173713.8|Ube2i|ENSMUSG00000015120.16|ubiquitin-conjugating enzyme E2I
mm39_v1_chr1_+_64729603_64729625	0.183329	AGUGGUU	ENSMUST00000114077.8|Ccnyl1|ENSMUSG00000070871.11|cyclin Y-like 1
mm39_v1_chr14_+_30741082_30741114	0.181979	AGUGGUU	ENSMUST00000112098.11|Pbrm1|ENSMUSG00000042323.18|polybromo 1	ENSMUST00000112095.8|Pbrm1|ENSMUSG00000042323.18|polybromo 1	ENSMUST00000112106.8|Pbrm1|ENSMUSG00000042323.18|polybromo 1	ENSMUST00000146325.8|Pbrm1|ENSMUSG00000042323.18|polybromo 1
mm39_v1_chr1_+_136552639_136552688	0.178986	AGUGGUU	ENSMUST00000047734.15|Zfp281|ENSMUSG00000041483.15|zinc finger protein 281	ENSMUST00000112046.2|Zfp281|ENSMUSG00000041483.15|zinc finger protein 281
mm39_v1_chrX_+_52001108_52001238	0.176834	AGUGGUU	ENSMUST00000078944.13|Phf6|ENSMUSG00000025626.17|PHD finger protein 6	ENSMUST00000101587.10|Phf6|ENSMUSG00000025626.17|PHD finger protein 6	ENSMUST00000154864.4|Phf6|ENSMUSG00000025626.17|PHD finger protein 6
mm39_v1_chrX_-_100266032_100266169	0.169745	AGUGGUU	ENSMUST00000120389.8|Snx12|ENSMUSG00000046032.17|sorting nexin 12	ENSMUST00000156473.8|Snx12|ENSMUSG00000046032.17|sorting nexin 12	ENSMUST00000077876.4|Snx12|ENSMUSG00000046032.17|sorting nexin 12
mm39_v1_chr7_-_24919247_24919309	0.168694	AGUGGUU	ENSMUST00000058702.7|Dedd2|ENSMUSG00000054499.10|death effector domain-containing DNA binding protein 2
mm39_v1_chr8_+_106581719_106581781	0.165002	AGUGGUU	ENSMUST00000040445.9|Thap11|ENSMUSG00000036442.9|THAP domain containing 11
mm39_v1_chr2_-_156022054_156022158	0.164556	AGUGGUU	ENSMUST00000126992.8|Rbm39|ENSMUSG00000027620.17|RNA binding motif protein 39	ENSMUST00000146288.8|Rbm39|ENSMUSG00000027620.17|RNA binding motif protein 39	ENSMUST00000029149.13|Rbm39|ENSMUSG00000027620.17|RNA binding motif protein 39	ENSMUST00000109587.9|Rbm39|ENSMUSG00000027620.17|RNA binding motif protein 39	ENSMUST00000109584.8|Rbm39|ENSMUSG00000027620.17|RNA binding motif protein 39
mm39_v1_chr5_-_51711237_51711264	0.146576	AGUGGUU	ENSMUST00000132734.8|Ppargc1a|ENSMUSG00000029167.14|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm39_v1_chr3_+_58322119_58322161	0.143743	AGUGGUU	ENSMUST00000099090.7|Tsc22d2|ENSMUSG00000027806.10|TSC22 domain family, member 2	ENSMUST00000199164.2|Tsc22d2|ENSMUSG00000027806.10|TSC22 domain family, member 2
mm39_v1_chr19_+_40819682_40819757	0.131938	AGUGGUU	ENSMUST00000025983.13|Ccnj|ENSMUSG00000025010.15|cyclin J	ENSMUST00000119316.2|Ccnj|ENSMUSG00000025010.15|cyclin J
mm39_v1_chr12_-_108241392_108241476	0.131272	AGUGGUU	ENSMUST00000136175.3|Ccdc85c|ENSMUSG00000084883.3|coiled-coil domain containing 85C
mm39_v1_chr1_-_92107971_92108063	0.129111	AGUGGUU	ENSMUST00000186002.3|Hdac4|ENSMUSG00000026313.17|histone deacetylase 4	ENSMUST00000097644.9|Hdac4|ENSMUSG00000026313.17|histone deacetylase 4
mm39_v1_chr11_-_109364424_109364504	0.128521	AGUGGUU	ENSMUST00000070152.12|Slc16a6|ENSMUSG00000041920.15|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm39_v1_chr9_-_59393893_59393919	0.1169	AGUGGUU	ENSMUST00000171975.8|Arih1|ENSMUSG00000025234.12|ariadne RBR E3 ubiquitin protein ligase 1
mm39_v1_chr5_+_36622342_36622342	0.116718	AGUGGUU	ENSMUST00000031099.4|Grpel1|ENSMUSG00000029198.4|GrpE-like 1, mitochondrial
mm39_v1_chr17_+_29768757_29768773	0.116578	AGUGGUU	ENSMUST00000048677.9|Tbc1d22b|ENSMUSG00000042203.9|TBC1 domain family, member 22B	ENSMUST00000150388.3|Gm28052|ENSMUSG00000099329.3|predicted gene, 28052
mm39_v1_chr10_+_42554888_42554945	0.113008	AGUGGUU	ENSMUST00000040718.6|Ostm1|ENSMUSG00000038280.13|osteopetrosis associated transmembrane protein 1
mm39_v1_chr4_-_134014525_134014575	0.102808	AGUGGUU	ENSMUST00000145006.8|Pdik1l|ENSMUSG00000050890.16|PDLIM1 interacting kinase 1 like	ENSMUST00000105877.9|Pdik1l|ENSMUSG00000050890.16|PDLIM1 interacting kinase 1 like	ENSMUST00000127857.2|Pdik1l|ENSMUSG00000050890.16|PDLIM1 interacting kinase 1 like	ENSMUST00000105876.9|Pdik1l|ENSMUSG00000050890.16|PDLIM1 interacting kinase 1 like
mm39_v1_chr15_-_28025920_28025970	0.100658	AGUGGUU	ENSMUST00000090247.7|Trio|ENSMUSG00000022263.11|triple functional domain (PTPRF interacting)
mm39_v1_chr2_-_152673585_152673648	0.0980066	AGUGGUU	ENSMUST00000156688.2|Bcl2l1|ENSMUSG00000007659.19|BCL2-like 1	ENSMUST00000007803.12|Bcl2l1|ENSMUSG00000007659.19|BCL2-like 1
mm39_v1_chr1_+_40554513_40554596	0.0977157	AGUGGUU	ENSMUST00000027237.12|Il18rap|ENSMUSG00000026068.12|interleukin 18 receptor accessory protein
mm39_v1_chr4_+_129030710_129030792	0.091455	AGUGGUU	ENSMUST00000102600.4|Fndc5|ENSMUSG00000001334.10|fibronectin type III domain containing 5
mm39_v1_chr19_-_10181243_10181533	0.091155	AGUGGUU	ENSMUST00000142241.2|Fen1|ENSMUSG00000024742.16|flap structure specific endonuclease 1	ENSMUST00000116542.9|Fen1|ENSMUSG00000024742.16|flap structure specific endonuclease 1	ENSMUST00000025651.6|Fen1|ENSMUSG00000024742.16|flap structure specific endonuclease 1	ENSMUST00000156291.2|Fen1|ENSMUSG00000024742.16|flap structure specific endonuclease 1
mm39_v1_chr2_+_145745154_145745214	0.0802881	AGUGGUU	ENSMUST00000110000.8|Naa20|ENSMUSG00000002728.15|N(alpha)-acetyltransferase 20, NatB catalytic subunit	ENSMUST00000002805.14|Naa20|ENSMUSG00000002728.15|N(alpha)-acetyltransferase 20, NatB catalytic subunit	ENSMUST00000169732.8|Naa20|ENSMUSG00000002728.15|N(alpha)-acetyltransferase 20, NatB catalytic subunit	ENSMUST00000134759.3|Naa20|ENSMUSG00000002728.15|N(alpha)-acetyltransferase 20, NatB catalytic subunit
mm39_v1_chr5_+_122296322_122296419	0.0762447	AGUGGUU	ENSMUST00000102528.11|Ppp1cc|ENSMUSG00000004455.17|protein phosphatase 1 catalytic subunit gamma	ENSMUST00000086294.11|Ppp1cc|ENSMUSG00000004455.17|protein phosphatase 1 catalytic subunit gamma
mm39_v1_chr12_-_91556761_91556783	0.0705381	AGUGGUU	ENSMUST00000021345.14|Gtf2a1|ENSMUSG00000020962.15|general transcription factor II A, 1
mm39_v1_chr9_-_86453862_86453901	0.0537404	AGUGGUU	ENSMUST00000070064.11|Pgm3|ENSMUSG00000056131.14|phosphoglucomutase 3	ENSMUST00000072585.8|Pgm3|ENSMUSG00000056131.14|phosphoglucomutase 3
mm39_v1_chr2_+_90770742_90770888	0.0517805	AGUGGUU	ENSMUST00000005643.14|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000111451.10|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000177642.8|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000068726.13|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000068747.14|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1
mm39_v1_chr6_-_28261881_28261942	0.0450635	AGUGGUU	ENSMUST00000115320.8|Zfp800|ENSMUSG00000039841.15|zinc finger protein 800	ENSMUST00000123098.8|Zfp800|ENSMUSG00000039841.15|zinc finger protein 800	ENSMUST00000115321.9|Zfp800|ENSMUSG00000039841.15|zinc finger protein 800	ENSMUST00000155494.2|Zfp800|ENSMUSG00000039841.15|zinc finger protein 800
mm39_v1_chr15_-_57939579_57939641	0.0355617	AGUGGUU	ENSMUST00000177504.9|Gm29394|ENSMUSG00000022362.14|predicted gene 29394	ENSMUST00000176076.2|Gm29394|ENSMUSG00000022362.14|predicted gene 29394	ENSMUST00000177176.8|Gm29394|ENSMUSG00000022362.14|predicted gene 29394	ENSMUST00000177276.8|Zhx1|ENSMUSG00000022361.15|zinc fingers and homeoboxes 1	ENSMUST00000175805.9|Zhx1|ENSMUSG00000022361.15|zinc fingers and homeoboxes 1
mm39_v1_chr16_-_75563645_75563709	0.0239788	AGUGGUU	ENSMUST00000114244.2|Hspa13|ENSMUSG00000032932.16|heat shock protein 70 family, member 13	ENSMUST00000046283.16|Hspa13|ENSMUSG00000032932.16|heat shock protein 70 family, member 13
