mm39_v1_chr19_+_56276343_56276371	0.129527	AUGACAC	ENSMUST00000095948.11|Habp2|ENSMUSG00000025075.15|hyaluronic acid binding protein 2
mm39_v1_chr9_-_101128976_101129003	0.0719119	AUGACAC	ENSMUST00000075941.12|Ppp2r3a|ENSMUSG00000043154.16|protein phosphatase 2, regulatory subunit B'', alpha
mm39_v1_chr13_+_9143995_9144018	0.067048	AUGACAC	ENSMUST00000091829.4|Larp4b|ENSMUSG00000033499.15|La ribonucleoprotein domain family, member 4B
mm39_v1_chr16_+_24212284_24212320	0.0583231	AUGACAC	ENSMUST00000038053.14|Lpp|ENSMUSG00000033306.16|LIM domain containing preferred translocation partner in lipoma
mm39_v1_chr2_-_104324745_104324809	0.0543859	AUGACAC	ENSMUST00000028600.14|Hipk3|ENSMUSG00000027177.15|homeodomain interacting protein kinase 3
mm39_v1_chr15_+_55171138_55171158	0.0527982	AUGACAC	ENSMUST00000023053.12|Col14a1|ENSMUSG00000022371.17|collagen, type XIV, alpha 1	ENSMUST00000110217.10|Col14a1|ENSMUSG00000022371.17|collagen, type XIV, alpha 1
mm39_v1_chr14_-_4808744_4808823	0.0506838	AUGACAC	ENSMUST00000022303.17|Thrb|ENSMUSG00000021779.20|thyroid hormone receptor beta	ENSMUST00000091471.12|Thrb|ENSMUSG00000021779.20|thyroid hormone receptor beta
mm39_v1_chr1_-_93406515_93406544	0.0370705	AUGACAC	ENSMUST00000170883.8|Hdlbp|ENSMUSG00000034088.16|high density lipoprotein (HDL) binding protein	ENSMUST00000189025.7|Hdlbp|ENSMUSG00000034088.16|high density lipoprotein (HDL) binding protein
mm39_v1_chr2_+_58991352_58991398	0.0368669	AUGACAC	ENSMUST00000037903.15|Pkp4|ENSMUSG00000026991.21|plakophilin 4
mm39_v1_chr6_-_131365380_131365451	0.0366491	AUGACAC	ENSMUST00000032309.13|Ybx3|ENSMUSG00000030189.16|Y box protein 3	ENSMUST00000087865.4|Ybx3|ENSMUSG00000030189.16|Y box protein 3
mm39_v1_chr11_-_34158085_34158092	0.0361027	AUGACAC	ENSMUST00000060271.3|Foxi1|ENSMUSG00000047861.3|forkhead box I1
mm39_v1_chr15_+_54609011_54609098	0.035222	AUGACAC	ENSMUST00000050027.9|Ccn3|ENSMUSG00000037362.9|cellular communication network factor 3
mm39_v1_chr2_-_73741664_73741675	0.0340759	AUGACAC	ENSMUST00000111996.8|Atp5g3|ENSMUSG00000018770.10|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)	ENSMUST00000018914.3|Atp5g3|ENSMUSG00000018770.10|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)
mm39_v1_chr11_+_72498029_72498133	0.0301351	AUGACAC	ENSMUST00000021148.13|Ube2g1|ENSMUSG00000020794.14|ubiquitin-conjugating enzyme E2G 1	ENSMUST00000138247.8|Ube2g1|ENSMUSG00000020794.14|ubiquitin-conjugating enzyme E2G 1
mm39_v1_chr10_-_93146937_93147024	0.0295848	AUGACAC	ENSMUST00000008542.12|Elk3|ENSMUSG00000008398.17|ELK3, member of ETS oncogene family
mm39_v1_chr5_+_43390513_43390580	0.0283253	AUGACAC	ENSMUST00000166713.9|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2	ENSMUST00000169035.8|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2	ENSMUST00000114065.9|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2
mm39_v1_chr13_-_12121831_12121871	0.025398	AUGACAC	ENSMUST00000021750.15|Ryr2|ENSMUSG00000021313.17|ryanodine receptor 2, cardiac	ENSMUST00000170156.3|Ryr2|ENSMUSG00000021313.17|ryanodine receptor 2, cardiac	ENSMUST00000220597.2|Ryr2|ENSMUSG00000021313.17|ryanodine receptor 2, cardiac
mm39_v1_chr19_+_41471067_41471128	0.0239598	AUGACAC	ENSMUST00000067795.13|Lcor|ENSMUSG00000025019.18|ligand dependent nuclear receptor corepressor
mm39_v1_chr19_-_10502468_10502545	0.0214473	AUGACAC	ENSMUST00000025570.8|Sdhaf2|ENSMUSG00000024668.9|succinate dehydrogenase complex assembly factor 2	ENSMUST00000236455.2|Sdhaf2|ENSMUSG00000024668.9|succinate dehydrogenase complex assembly factor 2
mm39_v1_chr3_+_104545974_104545991	0.0209217	AUGACAC	ENSMUST00000046212.2|Slc16a1|ENSMUSG00000032902.2|solute carrier family 16 (monocarboxylic acid transporters), member 1
mm39_v1_chr18_-_63825380_63825409	0.0202516	AUGACAC	ENSMUST00000025476.4|Txnl1|ENSMUSG00000024583.4|thioredoxin-like 1
mm39_v1_chr17_+_79244553_79244612	0.0198899	AUGACAC	ENSMUST00000024887.6|Ndufaf7|ENSMUSG00000024082.6|NADH:ubiquinone oxidoreductase complex assembly factor 7	ENSMUST00000233068.2|Ndufaf7|ENSMUSG00000024082.6|NADH:ubiquinone oxidoreductase complex assembly factor 7	ENSMUST00000233777.2|Ndufaf7|ENSMUSG00000024082.6|NADH:ubiquinone oxidoreductase complex assembly factor 7
mm39_v1_chr14_-_60324265_60324374	0.0192237	AUGACAC	ENSMUST00000080368.13|Atp8a2|ENSMUSG00000021983.17|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
mm39_v1_chr4_+_129714494_129714503	0.0182589	AUGACAC	ENSMUST00000165853.2|Ptp4a2|ENSMUSG00000028788.15|protein tyrosine phosphatase 4a2
mm39_v1_chr11_+_80099843_80099884	0.0159937	AUGACAC	ENSMUST00000077451.14|Rhot1|ENSMUSG00000017686.18|ras homolog family member T1	ENSMUST00000055056.16|Rhot1|ENSMUSG00000017686.18|ras homolog family member T1
mm39_v1_chr2_+_107120934_107121005	0.0157374	AUGACAC	ENSMUST00000037012.3|Kcna4|ENSMUSG00000042604.6|potassium voltage-gated channel, shaker-related subfamily, member 4
mm39_v1_chr11_-_116545071_116545151	0.0132358	AUGACAC	ENSMUST00000021166.6|Cygb|ENSMUSG00000020810.6|cytoglobin
mm39_v1_chr13_+_9326513_9326657	0.0125483	AUGACAC	ENSMUST00000174552.8|Dip2c|ENSMUSG00000048264.17|disco interacting protein 2 homolog C
mm39_v1_chr3_-_75464066_75464178	0.0114024	AUGACAC	ENSMUST00000162138.2|Pdcd10|ENSMUSG00000027835.12|programmed cell death 10	ENSMUST00000029424.12|Pdcd10|ENSMUSG00000027835.12|programmed cell death 10	ENSMUST00000161137.8|Pdcd10|ENSMUSG00000027835.12|programmed cell death 10
mm39_v1_chr11_+_97253221_97253377	0.0109054	AUGACAC	ENSMUST00000238729.2|Socs7|ENSMUSG00000038485.7|suppressor of cytokine signaling 7	ENSMUST00000045540.4|Socs7|ENSMUSG00000038485.7|suppressor of cytokine signaling 7
mm39_v1_chr2_-_84481058_84481093	0.00924829	AUGACAC	ENSMUST00000111670.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111697.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111696.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111678.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111690.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111695.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111677.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111698.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000099941.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111676.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111694.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111675.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111689.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111687.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111692.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111685.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111686.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111688.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111693.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111684.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1
mm39_v1_chr11_+_53241561_53241660	0.00859951	AUGACAC	ENSMUST00000060945.12|Aff4|ENSMUSG00000049470.14|AF4/FMR2 family, member 4
mm39_v1_chr10_+_69369590_69369603	0.00832446	AUGACAC	ENSMUST00000182884.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial
mm39_v1_chr3_-_115508680_115508721	0.00814516	AUGACAC	ENSMUST00000055676.4|S1pr1|ENSMUSG00000045092.9|sphingosine-1-phosphate receptor 1
mm39_v1_chr14_-_21102487_21102592	0.00790307	AUGACAC	ENSMUST00000154460.8|Ap3m1|ENSMUSG00000021824.14|adaptor-related protein complex 3, mu 1 subunit	ENSMUST00000130291.8|Ap3m1|ENSMUSG00000021824.14|adaptor-related protein complex 3, mu 1 subunit
mm39_v1_chr15_-_71599664_71599697	0.00765508	AUGACAC	ENSMUST00000022953.10|Fam135b|ENSMUSG00000036800.9|family with sequence similarity 135, member B
mm39_v1_chr13_+_83652352_83652374	0.00751818	AUGACAC	ENSMUST00000198916.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000200123.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000005722.14|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000163888.8|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr19_-_46561532_46561646	0.00743191	AUGACAC	ENSMUST00000026009.10|Arl3|ENSMUSG00000025035.10|ADP-ribosylation factor-like 3	ENSMUST00000236255.2|Arl3|ENSMUSG00000025035.10|ADP-ribosylation factor-like 3
mm39_v1_chr11_+_87959067_87959115	0.00708081	AUGACAC	ENSMUST00000018521.11|Vezf1|ENSMUSG00000018377.11|vascular endothelial zinc finger 1
mm39_v1_chr9_-_75316625_75316668	0.00674808	AUGACAC	ENSMUST00000168937.8|Mapk6|ENSMUSG00000042688.17|mitogen-activated protein kinase 6
mm39_v1_chr13_-_114595475_114595493	0.00605937	AUGACAC	ENSMUST00000022287.8|Fst|ENSMUSG00000021765.10|follistatin	ENSMUST00000223640.3|Fst|ENSMUSG00000021765.10|follistatin
mm39_v1_chr2_-_20973692_20973768	0.00567525	AUGACAC	ENSMUST00000114594.8|Arhgap21|ENSMUSG00000036591.17|Rho GTPase activating protein 21
mm39_v1_chr7_+_107166653_107166668	0.00530306	AUGACAC	ENSMUST00000120990.2|Olfml1|ENSMUSG00000051041.9|olfactomedin-like 1
mm39_v1_chr16_-_21513317_21513415	0.00469342	AUGACAC	ENSMUST00000231592.2|2510009E07Rik|ENSMUSG00000043391.11|RIKEN cDNA 2510009E07 gene	ENSMUST00000053336.8|2510009E07Rik|ENSMUSG00000043391.11|RIKEN cDNA 2510009E07 gene
mm39_v1_chr19_+_8797330_8797398	0.004228	AUGACAC	ENSMUST00000096753.5|Hnrnpul2|ENSMUSG00000071659.5|heterogeneous nuclear ribonucleoprotein U-like 2
mm39_v1_chrX_-_87159237_87159281	0.00390047	AUGACAC	ENSMUST00000113966.8|Il1rapl1|ENSMUSG00000052372.11|interleukin 1 receptor accessory protein-like 1	ENSMUST00000113964.2|Il1rapl1|ENSMUSG00000052372.11|interleukin 1 receptor accessory protein-like 1
mm39_v1_chr19_-_29783389_29783389	0.00366656	AUGACAC	ENSMUST00000177155.8|9930021J03Rik|ENSMUSG00000046138.16|RIKEN cDNA 9930021J03 gene
mm39_v1_chr1_+_57814001_57814114	0.00363484	AUGACAC	ENSMUST00000167085.8|Spats2l|ENSMUSG00000038305.16|spermatogenesis associated, serine-rich 2-like
mm39_v1_chr2_-_33321306_33321359	0.003557	AUGACAC	ENSMUST00000113158.8|Zbtb34|ENSMUSG00000068966.11|zinc finger and BTB domain containing 34
mm39_v1_chr1_+_15382676_15382676	0.000873707	AUGACAC	ENSMUST00000170146.3|Kcnb2|ENSMUSG00000092083.5|potassium voltage gated channel, Shab-related subfamily, member 2
mm39_v1_chr11_-_86698484_86698572	0.000729996	AUGACAC	ENSMUST00000018569.14|Dhx40|ENSMUSG00000018425.19|DEAH (Asp-Glu-Ala-His) box polypeptide 40
mm39_v1_chr3_-_58433313_58433318	3.652e-05	AUGACAC	ENSMUST00000029385.9|Serp1|ENSMUSG00000027808.9|stress-associated endoplasmic reticulum protein 1
