mm39_v1_chr5_-_108697857_108697890	34.3724	AUGGCUU	ENSMUST00000129040.2|Cplx1|ENSMUSG00000033615.10|complexin 1	ENSMUST00000046892.10|Cplx1|ENSMUSG00000033615.10|complexin 1
mm39_v1_chr4_-_87148672_87148714	24.4626	AUGGCUU	ENSMUST00000107157.9|Slc24a2|ENSMUSG00000037996.18|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm39_v1_chr7_-_74959010_74959037	18.3939	AUGGCUU	ENSMUST00000165175.8|Sv2b|ENSMUSG00000053025.14|synaptic vesicle glycoprotein 2 b
mm39_v1_chr13_+_54519161_54519173	17.9729	AUGGCUU	ENSMUST00000026985.9|Cplx2|ENSMUSG00000025867.9|complexin 2
mm39_v1_chr8_+_96429665_96429698	16.9704	AUGGCUU	ENSMUST00000073139.14|Ndrg4|ENSMUSG00000036564.18|N-myc downstream regulated gene 4	ENSMUST00000080666.8|Ndrg4|ENSMUSG00000036564.18|N-myc downstream regulated gene 4	ENSMUST00000212160.2|Ndrg4|ENSMUSG00000036564.18|N-myc downstream regulated gene 4
mm39_v1_chr1_-_173195236_173195261	16.6472	AUGGCUU	ENSMUST00000005470.5|Cadm3|ENSMUSG00000005338.15|cell adhesion molecule 3	ENSMUST00000111220.8|Cadm3|ENSMUSG00000005338.15|cell adhesion molecule 3
mm39_v1_chr2_+_65451100_65451170	16.3425	AUGGCUU	ENSMUST00000144254.6|Scn2a|ENSMUSG00000075318.14|sodium channel, voltage-gated, type II, alpha	ENSMUST00000028377.14|Scn2a|ENSMUSG00000075318.14|sodium channel, voltage-gated, type II, alpha
mm39_v1_chr11_+_42310557_42310612	16.2226	AUGGCUU	ENSMUST00000007797.10|Gabrb2|ENSMUSG00000007653.13|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2
mm39_v1_chr10_-_108846816_108846844	15.7558	AUGGCUU	ENSMUST00000105276.8|Syt1|ENSMUSG00000035864.15|synaptotagmin I	ENSMUST00000064054.14|Syt1|ENSMUSG00000035864.15|synaptotagmin I
mm39_v1_chr1_-_193052568_193052606	15.5417	AUGGCUU	ENSMUST00000016323.11|Camk1g|ENSMUSG00000016179.12|calcium/calmodulin-dependent protein kinase I gamma
mm39_v1_chr6_-_136150076_136150146	15.3483	AUGGCUU	ENSMUST00000053880.13|Grin2b|ENSMUSG00000030209.15|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm39_v1_chr1_+_34840785_34840875	15.0844	AUGGCUU	ENSMUST00000047664.16|Arhgef4|ENSMUSG00000037509.22|Rho guanine nucleotide exchange factor (GEF) 4	ENSMUST00000211073.2|SMIM39|ENSMUSG00000118272.2|novel protein
mm39_v1_chr5_+_130477642_130477671	13.9868	AUGGCUU	ENSMUST00000111288.4|Caln1|ENSMUSG00000060371.13|calneuron 1
mm39_v1_chr8_+_14145848_14145931	13.8125	AUGGCUU	ENSMUST00000152652.8|Dlgap2|ENSMUSG00000047495.16|DLG associated protein 2	ENSMUST00000133298.8|Dlgap2|ENSMUSG00000047495.16|DLG associated protein 2
mm39_v1_chr8_-_69636825_69636890	13.637	AUGGCUU	ENSMUST00000185176.8|Lzts1|ENSMUSG00000036306.14|leucine zipper, putative tumor suppressor 1
mm39_v1_chr6_-_18514801_18514859	13.4165	AUGGCUU	ENSMUST00000090601.12|Cttnbp2|ENSMUSG00000000416.17|cortactin binding protein 2
mm39_v1_chr15_-_43034205_43034227	13.254	AUGGCUU	ENSMUST00000063492.8|Rspo2|ENSMUSG00000051920.8|R-spondin 2	ENSMUST00000226810.2|Rspo2|ENSMUSG00000051920.8|R-spondin 2
mm39_v1_chrX_+_92698469_92698587	13.0463	AUGGCUU	ENSMUST00000113933.9|Pcyt1b|ENSMUSG00000035246.17|phosphate cytidylyltransferase 1, choline, beta isoform
mm39_v1_chr14_-_68362284_68362305	12.5929	AUGGCUU	ENSMUST00000111089.8|Nefm|ENSMUSG00000022054.12|neurofilament, medium polypeptide	ENSMUST00000022638.6|Nefm|ENSMUSG00000022054.12|neurofilament, medium polypeptide
mm39_v1_chr11_+_69217078_69217102	12.3352	AUGGCUU	ENSMUST00000018614.3|Kcnab3|ENSMUSG00000018470.9|potassium voltage-gated channel, shaker-related subfamily, beta member 3
mm39_v1_chr1_-_154602102_154602132	12.292	AUGGCUU	ENSMUST00000187541.7|Cacna1e|ENSMUSG00000004110.18|calcium channel, voltage-dependent, R type, alpha 1E subunit
mm39_v1_chr13_+_117738972_117739018	12.161	AUGGCUU	ENSMUST00000006991.9|Hcn1|ENSMUSG00000021730.9|hyperpolarization activated cyclic nucleotide gated potassium channel 1
mm39_v1_chr11_+_7013422_7013489	11.6102	AUGGCUU	ENSMUST00000020706.5|Adcy1|ENSMUSG00000020431.6|adenylate cyclase 1
mm39_v1_chr5_-_103247920_103247954	11.4741	AUGGCUU	ENSMUST00000112848.8|Mapk10|ENSMUSG00000046709.19|mitogen-activated protein kinase 10
mm39_v1_chr5_+_113638313_113638417	11.2993	AUGGCUU	ENSMUST00000094452.4|Wscd2|ENSMUSG00000063430.10|WSC domain containing 2
mm39_v1_chr9_-_70048766_70048860	11.0856	AUGGCUU	ENSMUST00000034749.16|Fam81a|ENSMUSG00000032224.16|family with sequence similarity 81, member A
mm39_v1_chr5_+_71857261_71857292	11.0544	AUGGCUU	ENSMUST00000031122.9|Gabrb1|ENSMUSG00000029212.12|gamma-aminobutyric acid (GABA) A receptor, subunit beta 1
mm39_v1_chr1_-_22031718_22031805	11.0497	AUGGCUU	ENSMUST00000029667.13|Kcnq5|ENSMUSG00000028033.17|potassium voltage-gated channel, subfamily Q, member 5	ENSMUST00000173058.8|Kcnq5|ENSMUSG00000028033.17|potassium voltage-gated channel, subfamily Q, member 5	ENSMUST00000173404.2|Kcnq5|ENSMUSG00000028033.17|potassium voltage-gated channel, subfamily Q, member 5
mm39_v1_chr7_+_43959637_43959677	10.7933	AUGGCUU	ENSMUST00000107938.8|Shank1|ENSMUSG00000038738.16|SH3 and multiple ankyrin repeat domains 1
mm39_v1_chrX_+_40490005_40490181	10.6417	AUGGCUU	ENSMUST00000115103.9|Gria3|ENSMUSG00000001986.17|glutamate receptor, ionotropic, AMPA3 (alpha 3)	ENSMUST00000076349.12|Gria3|ENSMUSG00000001986.17|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm39_v1_chr2_-_136229849_136229905	10.486	AUGGCUU	ENSMUST00000035264.9|Pak5|ENSMUSG00000039913.13|p21 (RAC1) activated kinase 5	ENSMUST00000077200.4|Pak5|ENSMUSG00000039913.13|p21 (RAC1) activated kinase 5
mm39_v1_chr6_+_55428963_55429042	10.4319	AUGGCUU	ENSMUST00000070736.12|Adcyap1r1|ENSMUSG00000029778.13|adenylate cyclase activating polypeptide 1 receptor 1	ENSMUST00000070756.12|Adcyap1r1|ENSMUSG00000029778.13|adenylate cyclase activating polypeptide 1 receptor 1	ENSMUST00000166962.8|Adcyap1r1|ENSMUSG00000029778.13|adenylate cyclase activating polypeptide 1 receptor 1
mm39_v1_chr17_+_55752485_55752551	10.3947	AUGGCUU	ENSMUST00000025000.4|St6gal2|ENSMUSG00000024172.11|beta galactoside alpha 2,6 sialyltransferase 2
mm39_v1_chr1_+_134637031_134637056	10.362	AUGGCUU	ENSMUST00000121990.2|Syt2|ENSMUSG00000026452.16|synaptotagmin II
mm39_v1_chr13_-_52685305_52685321	10.3096	AUGGCUU	ENSMUST00000057442.8|Diras2|ENSMUSG00000047842.8|DIRAS family, GTP-binding RAS-like 2
mm39_v1_chr18_-_43820759_43820838	10.1578	AUGGCUU	ENSMUST00000082254.8|Jakmip2|ENSMUSG00000024502.11|janus kinase and microtubule interacting protein 2
mm39_v1_chr9_-_108067552_108067617	9.97113	AUGGCUU	ENSMUST00000035208.14|Bsn|ENSMUSG00000032589.15|bassoon
mm39_v1_chr4_+_21931290_21931367	9.8461	AUGGCUU	ENSMUST00000029908.8|Faxc|ENSMUSG00000028246.14|failed axon connections homolog
mm39_v1_chr2_+_83642910_83642987	9.45625	AUGGCUU	ENSMUST00000051454.4|Fam171b|ENSMUSG00000048388.4|family with sequence similarity 171, member B
mm39_v1_chrX_-_74621828_74621854	9.32667	AUGGCUU	ENSMUST00000033545.6|Rab39b|ENSMUSG00000031202.6|RAB39B, member RAS oncogene family
mm39_v1_chr7_+_29003382_29003432	9.05139	AUGGCUU	ENSMUST00000049977.13|Dpf1|ENSMUSG00000030584.15|D4, zinc and double PHD fingers family 1
mm39_v1_chr10_-_89093441_89093484	8.67919	AUGGCUU	ENSMUST00000182341.8|Ano4|ENSMUSG00000035189.18|anoctamin 4	ENSMUST00000182613.8|Ano4|ENSMUSG00000035189.18|anoctamin 4
mm39_v1_chr7_+_44033520_44033578	8.57589	AUGGCUU	ENSMUST00000118962.8|Syt3|ENSMUSG00000030731.14|synaptotagmin III	ENSMUST00000118831.8|Syt3|ENSMUSG00000030731.14|synaptotagmin III
mm39_v1_chr14_+_27344385_27344500	8.55024	AUGGCUU	ENSMUST00000210135.2|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2	ENSMUST00000090302.6|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2	ENSMUST00000211087.2|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2
mm39_v1_chr7_+_90739904_90739959	8.24403	AUGGCUU	ENSMUST00000107196.10|Dlg2|ENSMUSG00000052572.20|discs large MAGUK scaffold protein 2	ENSMUST00000074273.10|Dlg2|ENSMUSG00000052572.20|discs large MAGUK scaffold protein 2
mm39_v1_chr3_-_110050312_110050326	8.21795	AUGGCUU	ENSMUST00000156177.9|Ntng1|ENSMUSG00000059857.16|netrin G1
mm39_v1_chr15_+_39061612_39061758	7.933	AUGGCUU	ENSMUST00000082054.12|Rims2|ENSMUSG00000037386.17|regulating synaptic membrane exocytosis 2	ENSMUST00000227243.2|Rims2|ENSMUSG00000037386.17|regulating synaptic membrane exocytosis 2	ENSMUST00000042917.10|Rims2|ENSMUSG00000037386.17|regulating synaptic membrane exocytosis 2
mm39_v1_chr17_+_93506590_93506601	7.90678	AUGGCUU	ENSMUST00000064775.8|Adcyap1|ENSMUSG00000024256.8|adenylate cyclase activating polypeptide 1
mm39_v1_chr2_-_167032068_167032093	7.8392	AUGGCUU	ENSMUST00000059826.10|Kcnb1|ENSMUSG00000050556.10|potassium voltage gated channel, Shab-related subfamily, member 1
mm39_v1_chr11_+_67477347_67477366	7.83896	AUGGCUU	ENSMUST00000108682.9|Gas7|ENSMUSG00000033066.17|growth arrest specific 7
mm39_v1_chr6_+_107506678_107506741	7.80745	AUGGCUU	ENSMUST00000049285.10|Lrrn1|ENSMUSG00000034648.10|leucine rich repeat protein 1, neuronal
mm39_v1_chr6_+_8948608_8948619	7.79701	AUGGCUU	ENSMUST00000160300.2|Nxph1|ENSMUSG00000046178.4|neurexophilin 1
mm39_v1_chr1_-_22845124_22845203	7.78701	AUGGCUU	ENSMUST00000115273.10|Rims1|ENSMUSG00000041670.20|regulating synaptic membrane exocytosis 1
mm39_v1_chr1_-_125839897_125839951	7.68714	AUGGCUU	ENSMUST00000159417.2|Lypd1|ENSMUSG00000026344.10|Ly6/Plaur domain containing 1
mm39_v1_chr9_-_95632387_95632421	7.67182	AUGGCUU	ENSMUST00000189137.7|Trpc1|ENSMUSG00000032839.14|transient receptor potential cation channel, subfamily C, member 1	ENSMUST00000053785.10|Trpc1|ENSMUSG00000032839.14|transient receptor potential cation channel, subfamily C, member 1
mm39_v1_chr13_+_83652352_83652374	7.63843	AUGGCUU	ENSMUST00000198916.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000200123.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000005722.14|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000163888.8|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr8_-_124586159_124586269	7.63318	AUGGCUU	ENSMUST00000034452.12|Ccsap|ENSMUSG00000031971.16|centriole, cilia and spindle associated protein
mm39_v1_chr18_+_23548455_23548511	7.59017	AUGGCUU	ENSMUST00000115832.4|Dtna|ENSMUSG00000024302.17|dystrobrevin alpha
mm39_v1_chr11_-_119438569_119438585	7.40089	AUGGCUU	ENSMUST00000026670.5|Nptx1|ENSMUSG00000025582.5|neuronal pentraxin 1
mm39_v1_chr1_+_166081664_166081722	7.34307	AUGGCUU	ENSMUST00000111416.7|Ildr2|ENSMUSG00000040612.14|immunoglobulin-like domain containing receptor 2
mm39_v1_chr9_+_45029080_45029179	7.34194	AUGGCUU	ENSMUST00000170998.9|Scn2b|ENSMUSG00000070304.13|sodium channel, voltage-gated, type II, beta	ENSMUST00000093855.4|Scn2b|ENSMUSG00000070304.13|sodium channel, voltage-gated, type II, beta
mm39_v1_chr2_+_55327110_55327194	7.33969	AUGGCUU	ENSMUST00000112633.3|Kcnj3|ENSMUSG00000026824.12|potassium inwardly-rectifying channel, subfamily J, member 3	ENSMUST00000112632.2|Kcnj3|ENSMUSG00000026824.12|potassium inwardly-rectifying channel, subfamily J, member 3
mm39_v1_chr7_+_24181416_24181501	7.30298	AUGGCUU	ENSMUST00000068023.8|Cadm4|ENSMUSG00000054793.9|cell adhesion molecule 4
mm39_v1_chr2_-_79959178_79959339	7.25847	AUGGCUU	ENSMUST00000102654.11|Pde1a|ENSMUSG00000059173.20|phosphodiesterase 1A, calmodulin-dependent	ENSMUST00000102655.10|Pde1a|ENSMUSG00000059173.20|phosphodiesterase 1A, calmodulin-dependent
mm39_v1_chr9_+_108685555_108685640	7.15011	AUGGCUU	ENSMUST00000035218.9|Nckipsd|ENSMUSG00000032598.9|NCK interacting protein with SH3 domain	ENSMUST00000195323.2|Nckipsd|ENSMUSG00000032598.9|NCK interacting protein with SH3 domain	ENSMUST00000194819.2|Nckipsd|ENSMUSG00000032598.9|NCK interacting protein with SH3 domain
mm39_v1_chr14_+_66581818_66581829	7.09206	AUGGCUU	ENSMUST00000118426.8|Stmn4|ENSMUSG00000022044.15|stathmin-like 4	ENSMUST00000121955.8|Stmn4|ENSMUSG00000022044.15|stathmin-like 4	ENSMUST00000120229.8|Stmn4|ENSMUSG00000022044.15|stathmin-like 4	ENSMUST00000134440.2|Stmn4|ENSMUSG00000022044.15|stathmin-like 4
mm39_v1_chr3_+_153679073_153679162	6.94187	AUGGCUU	ENSMUST00000089948.6|Slc44a5|ENSMUSG00000028360.11|solute carrier family 44, member 5
mm39_v1_chr3_-_84212069_84212116	6.93484	AUGGCUU	ENSMUST00000107692.8|Trim2|ENSMUSG00000027993.17|tripartite motif-containing 2
mm39_v1_chr19_-_18978463_18978483	6.89664	AUGGCUU	ENSMUST00000040153.15|Rorb|ENSMUSG00000036192.16|RAR-related orphan receptor beta	ENSMUST00000112828.8|Rorb|ENSMUSG00000036192.16|RAR-related orphan receptor beta
mm39_v1_chr8_-_17585263_17585335	6.78961	AUGGCUU	ENSMUST00000082104.7|Csmd1|ENSMUSG00000060924.16|CUB and Sushi multiple domains 1
mm39_v1_chr12_+_29578354_29578468	6.77372	AUGGCUU	ENSMUST00000218583.2|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like	ENSMUST00000049784.17|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like
mm39_v1_chr10_+_7465555_7465743	6.76626	AUGGCUU	ENSMUST00000134346.8|Lrp11|ENSMUSG00000019796.13|low density lipoprotein receptor-related protein 11	ENSMUST00000019931.12|Lrp11|ENSMUSG00000019796.13|low density lipoprotein receptor-related protein 11	ENSMUST00000130590.8|Lrp11|ENSMUSG00000019796.13|low density lipoprotein receptor-related protein 11
mm39_v1_chr2_+_174485327_174485327	6.75958	AUGGCUU	ENSMUST00000059452.6|Zfp831|ENSMUSG00000050600.6|zinc finger protein 831
mm39_v1_chr16_-_94798509_94798562	6.61347	AUGGCUU	ENSMUST00000095873.12|Kcnj6|ENSMUSG00000043301.17|potassium inwardly-rectifying channel, subfamily J, member 6	ENSMUST00000099508.4|Kcnj6|ENSMUSG00000043301.17|potassium inwardly-rectifying channel, subfamily J, member 6
mm39_v1_chr13_-_58056089_58056135	6.54151	AUGGCUU	ENSMUST00000185502.7|Spock1|ENSMUSG00000056222.16|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1	ENSMUST00000186271.7|Spock1|ENSMUSG00000056222.16|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1	ENSMUST00000185905.2|Spock1|ENSMUSG00000056222.16|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1	ENSMUST00000187852.7|Spock1|ENSMUSG00000056222.16|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1
mm39_v1_chr10_-_86334700_86334730	6.48418	AUGGCUU	ENSMUST00000120638.8|Syn3|ENSMUSG00000059602.15|synapsin III
mm39_v1_chr13_-_95386776_95386844	6.46753	AUGGCUU	ENSMUST00000162153.9|Pde8b|ENSMUSG00000021684.18|phosphodiesterase 8B	ENSMUST00000160957.9|Pde8b|ENSMUSG00000021684.18|phosphodiesterase 8B	ENSMUST00000159598.2|Pde8b|ENSMUSG00000021684.18|phosphodiesterase 8B	ENSMUST00000162412.8|Pde8b|ENSMUSG00000021684.18|phosphodiesterase 8B
mm39_v1_chr4_+_125384481_125384495	6.33172	AUGGCUU	ENSMUST00000030676.8|Grik3|ENSMUSG00000001985.10|glutamate receptor, ionotropic, kainate 3
mm39_v1_chr17_+_26028059_26028146	6.28962	AUGGCUU	ENSMUST00000045692.9|Fbxl16|ENSMUSG00000025738.9|F-box and leucine-rich repeat protein 16
mm39_v1_chr7_-_109092834_109092945	6.22705	AUGGCUU	ENSMUST00000106739.8|Trim66|ENSMUSG00000031026.16|tripartite motif-containing 66
mm39_v1_chr5_+_25964985_25965041	5.9253	AUGGCUU	ENSMUST00000128727.8|Actr3b|ENSMUSG00000056367.15|ARP3 actin-related protein 3B	ENSMUST00000088244.6|Actr3b|ENSMUSG00000056367.15|ARP3 actin-related protein 3B
mm39_v1_chr3_+_129326004_129326089	5.82848	AUGGCUU	ENSMUST00000199910.5|Elovl6|ENSMUSG00000041220.11|ELOVL family member 6, elongation of long chain fatty acids (yeast)	ENSMUST00000197070.5|Elovl6|ENSMUSG00000041220.11|ELOVL family member 6, elongation of long chain fatty acids (yeast)	ENSMUST00000071402.7|Elovl6|ENSMUSG00000041220.11|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm39_v1_chr11_+_74510413_74510469	5.71739	AUGGCUU	ENSMUST00000100866.3|Ccdc92b|ENSMUSG00000069814.7|coiled-coil domain containing 92B
mm39_v1_chr10_-_18619439_18619508	5.71103	AUGGCUU	ENSMUST00000019999.7|Arfgef3|ENSMUSG00000019852.8|ARFGEF family member 3
mm39_v1_chr3_-_80820835_80820975	5.7094	AUGGCUU	ENSMUST00000107743.8|Glrb|ENSMUSG00000028020.17|glycine receptor, beta subunit	ENSMUST00000029654.15|Glrb|ENSMUSG00000028020.17|glycine receptor, beta subunit
mm39_v1_chr10_-_33500583_33500765	5.6586	AUGGCUU	ENSMUST00000161692.2|Clvs2|ENSMUSG00000019785.15|clavesin 2	ENSMUST00000160299.2|Clvs2|ENSMUSG00000019785.15|clavesin 2	ENSMUST00000019920.13|Clvs2|ENSMUSG00000019785.15|clavesin 2
mm39_v1_chr9_+_45749869_45749892	5.656	AUGGCUU	ENSMUST00000078111.11|Bace1|ENSMUSG00000032086.13|beta-site APP cleaving enzyme 1	ENSMUST00000034591.11|Bace1|ENSMUSG00000032086.13|beta-site APP cleaving enzyme 1
mm39_v1_chrX_-_166906307_166906330	5.60264	AUGGCUU	ENSMUST00000112149.9|Frmpd4|ENSMUSG00000049176.17|FERM and PDZ domain containing 4
mm39_v1_chr3_+_32871669_32871726	5.59116	AUGGCUU	ENSMUST00000072312.12|Usp13|ENSMUSG00000056900.14|ubiquitin specific peptidase 13 (isopeptidase T-3)	ENSMUST00000108228.8|Usp13|ENSMUSG00000056900.14|ubiquitin specific peptidase 13 (isopeptidase T-3)
mm39_v1_chr3_+_115801106_115801202	5.53797	AUGGCUU	ENSMUST00000029575.12|Extl2|ENSMUSG00000027963.15|exostosin-like glycosyltransferase 2	ENSMUST00000106501.8|Extl2|ENSMUSG00000027963.15|exostosin-like glycosyltransferase 2
mm39_v1_chr5_-_135963408_135963467	5.4666	AUGGCUU	ENSMUST00000198270.2|Ywhag|ENSMUSG00000051391.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide	ENSMUST00000055808.6|Ywhag|ENSMUSG00000051391.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm39_v1_chr4_-_25800083_25800146	5.33765	AUGGCUU	ENSMUST00000084770.5|Fut9|ENSMUSG00000055373.9|fucosyltransferase 9
mm39_v1_chr9_+_8544143_8544224	5.14025	AUGGCUU	ENSMUST00000050433.8|Trpc6|ENSMUSG00000031997.10|transient receptor potential cation channel, subfamily C, member 6	ENSMUST00000217462.2|Trpc6|ENSMUSG00000031997.10|transient receptor potential cation channel, subfamily C, member 6
mm39_v1_chr9_-_42035560_42035631	5.06096	AUGGCUU	ENSMUST00000060989.9|Sorl1|ENSMUSG00000049313.9|sortilin-related receptor, LDLR class A repeats-containing
mm39_v1_chr7_-_112968533_112968602	5.0435	AUGGCUU	ENSMUST00000047091.14|Btbd10|ENSMUSG00000038187.15|BTB (POZ) domain containing 10	ENSMUST00000119278.8|Btbd10|ENSMUSG00000038187.15|BTB (POZ) domain containing 10
mm39_v1_chr6_-_35516700_35516823	4.7048	AUGGCUU	ENSMUST00000201026.2|Mtpn|ENSMUSG00000029840.9|myotrophin	ENSMUST00000031866.9|Mtpn|ENSMUSG00000029840.9|myotrophin
mm39_v1_chr10_+_69369590_69369603	4.69143	AUGGCUU	ENSMUST00000182884.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial
mm39_v1_chr10_+_82821304_82821338	4.50123	AUGGCUU	ENSMUST00000040110.8|Chst11|ENSMUSG00000034612.8|carbohydrate sulfotransferase 11
mm39_v1_chr13_+_105580147_105580147	4.49491	AUGGCUU	ENSMUST00000022235.6|Htr1a|ENSMUSG00000021721.6|5-hydroxytryptamine (serotonin) receptor 1A
mm39_v1_chr13_+_41403317_41403340	4.45097	AUGGCUU	ENSMUST00000165561.4|Smim13|ENSMUSG00000091264.4|small integral membrane protein 13
mm39_v1_chr11_+_94881861_94881916	4.32839	AUGGCUU	ENSMUST00000038696.12|Ppp1r9b|ENSMUSG00000038976.13|protein phosphatase 1, regulatory subunit 9B
mm39_v1_chr3_+_157239988_157240048	4.30873	AUGGCUU	ENSMUST00000029831.16|Zranb2|ENSMUSG00000028180.19|zinc finger, RAN-binding domain containing 2	ENSMUST00000106057.8|Zranb2|ENSMUSG00000028180.19|zinc finger, RAN-binding domain containing 2
mm39_v1_chr8_-_126625029_126625061	4.28381	AUGGCUU	ENSMUST00000047239.13|Pcnx2|ENSMUSG00000060212.14|pecanex homolog 2	ENSMUST00000131127.3|Pcnx2|ENSMUSG00000060212.14|pecanex homolog 2
mm39_v1_chr10_-_121146940_121147094	4.21348	AUGGCUU	ENSMUST00000064107.7|Tbc1d30|ENSMUSG00000052302.7|TBC1 domain family, member 30
mm39_v1_chr5_-_122187884_122187947	4.06436	AUGGCUU	ENSMUST00000111752.10|Cux2|ENSMUSG00000042589.19|cut-like homeobox 2
mm39_v1_chr16_+_37909363_37909426	3.97466	AUGGCUU	ENSMUST00000023507.13|Gsk3b|ENSMUSG00000022812.15|glycogen synthase kinase 3 beta
mm39_v1_chr14_+_120715855_120715923	3.95563	AUGGCUU	ENSMUST00000062117.14|Rap2a|ENSMUSG00000051615.15|RAS related protein 2a
mm39_v1_chr11_+_101066867_101066867	3.92147	AUGGCUU	ENSMUST00000103109.4|Cntnap1|ENSMUSG00000017167.7|contactin associated protein-like 1
mm39_v1_chr2_-_37537224_37537297	3.92139	AUGGCUU	ENSMUST00000028279.10|Strbp|ENSMUSG00000026915.17|spermatid perinuclear RNA binding protein
mm39_v1_chr8_-_71229293_71229361	3.90625	AUGGCUU	ENSMUST00000034296.15|Pik3r2|ENSMUSG00000031834.16|phosphoinositide-3-kinase regulatory subunit 2
mm39_v1_chrX_+_72546680_72546741	3.87829	AUGGCUU	ENSMUST00000033744.12|Atp2b3|ENSMUSG00000031376.16|ATPase, Ca++ transporting, plasma membrane 3	ENSMUST00000088429.8|Atp2b3|ENSMUSG00000031376.16|ATPase, Ca++ transporting, plasma membrane 3	ENSMUST00000114479.2|Atp2b3|ENSMUSG00000031376.16|ATPase, Ca++ transporting, plasma membrane 3
mm39_v1_chr16_-_28748410_28748457	3.84428	AUGGCUU	ENSMUST00000100023.3|Mb21d2|ENSMUSG00000051065.10|Mab-21 domain containing 2
mm39_v1_chr19_+_16933471_16933508	3.78968	AUGGCUU	ENSMUST00000087689.5|Prune2|ENSMUSG00000039126.11|prune homolog 2
mm39_v1_chr12_-_85017586_85017674	3.77408	AUGGCUU	ENSMUST00000165886.2|Arel1|ENSMUSG00000042350.14|apoptosis resistant E3 ubiquitin protein ligase 1	ENSMUST00000167448.8|Arel1|ENSMUSG00000042350.14|apoptosis resistant E3 ubiquitin protein ligase 1	ENSMUST00000043169.14|Arel1|ENSMUSG00000042350.14|apoptosis resistant E3 ubiquitin protein ligase 1
mm39_v1_chr15_-_74544409_74544425	3.76749	AUGGCUU	ENSMUST00000023268.14|Arc|ENSMUSG00000022602.15|activity regulated cytoskeletal-associated protein	ENSMUST00000110009.4|Arc|ENSMUSG00000022602.15|activity regulated cytoskeletal-associated protein
mm39_v1_chr2_+_163280375_163280456	3.75042	AUGGCUU	ENSMUST00000109420.10|Gdap1l1|ENSMUSG00000017943.16|ganglioside-induced differentiation-associated protein 1-like 1	ENSMUST00000109421.10|Gdap1l1|ENSMUSG00000017943.16|ganglioside-induced differentiation-associated protein 1-like 1	ENSMUST00000018087.13|Gdap1l1|ENSMUSG00000017943.16|ganglioside-induced differentiation-associated protein 1-like 1	ENSMUST00000137070.2|Gdap1l1|ENSMUSG00000017943.16|ganglioside-induced differentiation-associated protein 1-like 1
mm39_v1_chr10_+_56253418_56253434	3.70209	AUGGCUU	ENSMUST00000068581.9|Gja1|ENSMUSG00000050953.11|gap junction protein, alpha 1	ENSMUST00000217789.2|Gja1|ENSMUSG00000050953.11|gap junction protein, alpha 1
mm39_v1_chr8_-_61436249_61436353	3.69314	AUGGCUU	ENSMUST00000004430.14|Clcn3|ENSMUSG00000004319.16|chloride channel, voltage-sensitive 3	ENSMUST00000110301.2|Clcn3|ENSMUSG00000004319.16|chloride channel, voltage-sensitive 3	ENSMUST00000093490.9|Clcn3|ENSMUSG00000004319.16|chloride channel, voltage-sensitive 3
mm39_v1_chr17_-_88105422_88105476	3.65943	AUGGCUU	ENSMUST00000055221.9|Kcnk12|ENSMUSG00000050138.9|potassium channel, subfamily K, member 12
mm39_v1_chr10_-_127047396_127047502	3.51442	AUGGCUU	ENSMUST00000013970.9|Pip4k2c|ENSMUSG00000025417.9|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
mm39_v1_chr3_-_138780937_138781008	3.4776	AUGGCUU	ENSMUST00000098574.9|Rap1gds1|ENSMUSG00000028149.13|RAP1, GTP-GDP dissociation stimulator 1
mm39_v1_chrX_+_9066105_9066147	3.47411	AUGGCUU	ENSMUST00000069763.3|Lancl3|ENSMUSG00000047344.10|LanC lantibiotic synthetase component C-like 3 (bacterial)
mm39_v1_chr1_-_133728779_133728805	3.47117	AUGGCUU	ENSMUST00000143567.8|Atp2b4|ENSMUSG00000026463.18|ATPase, Ca++ transporting, plasma membrane 4
mm39_v1_chr7_+_121666388_121666438	3.44286	AUGGCUU	ENSMUST00000033158.6|Ubfd1|ENSMUSG00000030870.13|ubiquitin family domain containing 1
mm39_v1_chr15_+_101071948_101072029	3.43812	AUGGCUU	ENSMUST00000000544.12|Acvr1b|ENSMUSG00000000532.12|activin A receptor, type 1B
mm39_v1_chr7_-_121306476_121306685	3.3336	AUGGCUU	ENSMUST00000046929.7|Usp31|ENSMUSG00000063317.8|ubiquitin specific peptidase 31
mm39_v1_chr5_+_144037171_144037254	3.29945	AUGGCUU	ENSMUST00000041804.8|Lmtk2|ENSMUSG00000038970.8|lemur tyrosine kinase 2
mm39_v1_chr6_+_54658609_54658770	3.29225	AUGGCUU	ENSMUST00000190641.7|Mturn|ENSMUSG00000038065.14|maturin, neural progenitor differentiation regulator homolog (Xenopus)	ENSMUST00000187701.2|Mturn|ENSMUSG00000038065.14|maturin, neural progenitor differentiation regulator homolog (Xenopus)
mm39_v1_chrX_-_20816841_20816852	3.28221	AUGGCUU	ENSMUST00000009550.14|Elk1|ENSMUSG00000009406.14|ELK1, member of ETS oncogene family
mm39_v1_chr19_-_32717166_32717194	3.18869	AUGGCUU	ENSMUST00000235142.2|Atad1|ENSMUSG00000013662.7|ATPase family, AAA domain containing 1	ENSMUST00000070210.6|Atad1|ENSMUSG00000013662.7|ATPase family, AAA domain containing 1	ENSMUST00000236011.2|Atad1|ENSMUSG00000013662.7|ATPase family, AAA domain containing 1
mm39_v1_chr15_-_78004211_78004232	3.16678	AUGGCUU	ENSMUST00000019290.3|Cacng2|ENSMUSG00000019146.3|calcium channel, voltage-dependent, gamma subunit 2
mm39_v1_chr11_-_69692542_69692683	3.16527	AUGGCUU	ENSMUST00000011285.11|Fgf11|ENSMUSG00000042826.14|fibroblast growth factor 11	ENSMUST00000102585.2|Fgf11|ENSMUSG00000042826.14|fibroblast growth factor 11
mm39_v1_chrX_+_165021897_165021909	3.1618	AUGGCUU	ENSMUST00000112235.8|Gpm6b|ENSMUSG00000031342.18|glycoprotein m6b
mm39_v1_chr18_+_64387428_64387457	3.14736	AUGGCUU	ENSMUST00000025477.15|St8sia3|ENSMUSG00000056812.15|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
mm39_v1_chrX_+_7688528_7688528	3.12718	AUGGCUU	ENSMUST00000009875.5|Kcnd1|ENSMUSG00000009731.5|potassium voltage-gated channel, Shal-related family, member 1
mm39_v1_chr4_+_42916666_42916713	3.08732	AUGGCUU	ENSMUST00000132173.8|Phf24|ENSMUSG00000036062.14|PHD finger protein 24	ENSMUST00000107975.8|Phf24|ENSMUSG00000036062.14|PHD finger protein 24
mm39_v1_chr6_-_126717590_126717644	3.08307	AUGGCUU	ENSMUST00000185333.2|Kcna6|ENSMUSG00000038077.8|potassium voltage-gated channel, shaker-related, subfamily, member 6
mm39_v1_chr15_+_100659622_100659679	3.06683	AUGGCUU	ENSMUST00000023776.13|Slc4a8|ENSMUSG00000023032.13|solute carrier family 4 (anion exchanger), member 8
mm39_v1_chr7_-_141649003_141649043	3.05837	AUGGCUU	ENSMUST00000039926.10|Dusp8|ENSMUSG00000037887.12|dual specificity phosphatase 8
mm39_v1_chr1_-_14380418_14380463	3.02204	AUGGCUU	ENSMUST00000027066.13|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1	ENSMUST00000168081.9|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1
mm39_v1_chr2_-_154249997_154250034	2.98115	AUGGCUU	ENSMUST00000028991.7|Snta1|ENSMUSG00000027488.13|syntrophin, acidic 1	ENSMUST00000109728.8|Snta1|ENSMUSG00000027488.13|syntrophin, acidic 1
mm39_v1_chr8_-_68427217_68427248	2.96773	AUGGCUU	ENSMUST00000098696.10|Psd3|ENSMUSG00000030465.20|pleckstrin and Sec7 domain containing 3	ENSMUST00000038959.16|Psd3|ENSMUSG00000030465.20|pleckstrin and Sec7 domain containing 3	ENSMUST00000093469.11|Psd3|ENSMUSG00000030465.20|pleckstrin and Sec7 domain containing 3
mm39_v1_chr2_-_77349909_77349991	2.9577	AUGGCUU	ENSMUST00000111830.9|Zfp385b|ENSMUSG00000027016.18|zinc finger protein 385B
mm39_v1_chr3_+_88523440_88523458	2.93319	AUGGCUU	ENSMUST00000177498.8|Arhgef2|ENSMUSG00000028059.17|rho/rac guanine nucleotide exchange factor (GEF) 2	ENSMUST00000176500.8|Arhgef2|ENSMUSG00000028059.17|rho/rac guanine nucleotide exchange factor (GEF) 2
mm39_v1_chr16_-_35589726_35589755	2.87376	AUGGCUU	ENSMUST00000023554.9|Slc49a4|ENSMUSG00000022848.9|solute carrier family 49 member 4
mm39_v1_chr18_+_23885390_23885458	2.80107	AUGGCUU	ENSMUST00000170802.8|Mapre2|ENSMUSG00000024277.15|microtubule-associated protein, RP/EB family, member 2	ENSMUST00000155708.8|Mapre2|ENSMUSG00000024277.15|microtubule-associated protein, RP/EB family, member 2	ENSMUST00000118826.9|Mapre2|ENSMUSG00000024277.15|microtubule-associated protein, RP/EB family, member 2
mm39_v1_chr19_+_47167259_47167436	2.74244	AUGGCUU	ENSMUST00000111808.11|Neurl1a|ENSMUSG00000006435.17|neuralized E3 ubiquitin protein ligase 1A
mm39_v1_chr9_+_21077010_21077058	2.72128	AUGGCUU	ENSMUST00000039413.15|Pde4a|ENSMUSG00000032177.18|phosphodiesterase 4A, cAMP specific
mm39_v1_chr3_-_56091096_56091122	2.70573	AUGGCUU	ENSMUST00000029374.8|Nbea|ENSMUSG00000027799.13|neurobeachin
mm39_v1_chr2_+_37406630_37406647	2.66515	AUGGCUU	ENSMUST00000065441.7|Gpr21|ENSMUSG00000053164.7|G protein-coupled receptor 21
mm39_v1_chr9_+_3532778_3532778	2.66485	AUGGCUU	ENSMUST00000115733.3|Gucy1a2|ENSMUSG00000041624.11|guanylate cyclase 1, soluble, alpha 2
mm39_v1_chr5_-_44956981_44957014	2.63995	AUGGCUU	ENSMUST00000070748.10|Ldb2|ENSMUSG00000039706.12|LIM domain binding 2
mm39_v1_chr8_+_85763534_85763566	2.62696	AUGGCUU	ENSMUST00000093360.12|Tnpo2|ENSMUSG00000031691.15|transportin 2 (importin 3, karyopherin beta 2b)
mm39_v1_chr4_-_41569500_41569551	2.59521	AUGGCUU	ENSMUST00000108049.9|Fam219a|ENSMUSG00000028439.15|family with sequence similarity 219, member A	ENSMUST00000108052.10|Fam219a|ENSMUSG00000028439.15|family with sequence similarity 219, member A	ENSMUST00000108050.2|Fam219a|ENSMUSG00000028439.15|family with sequence similarity 219, member A
mm39_v1_chr5_+_13449276_13449350	2.48567	AUGGCUU	ENSMUST00000030714.9|Sema3a|ENSMUSG00000028883.20|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	ENSMUST00000141968.2|Sema3a|ENSMUSG00000028883.20|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm39_v1_chr15_-_103248512_103248527	2.36692	AUGGCUU	ENSMUST00000168828.3|Zfp385a|ENSMUSG00000000552.11|zinc finger protein 385A
mm39_v1_chr2_+_156038562_156038695	2.36238	AUGGCUU	ENSMUST00000037401.10|Phf20|ENSMUSG00000038116.17|PHD finger protein 20
mm39_v1_chr8_-_36716445_36716670	2.35253	AUGGCUU	ENSMUST00000239119.2|Lonrf1|ENSMUSG00000039633.8|LON peptidase N-terminal domain and ring finger 1	ENSMUST00000065297.6|Lonrf1|ENSMUSG00000039633.8|LON peptidase N-terminal domain and ring finger 1
mm39_v1_chr14_-_47059694_47059743	2.32556	AUGGCUU	ENSMUST00000111817.8|Gmfb|ENSMUSG00000062014.14|glia maturation factor, beta	ENSMUST00000079314.12|Gmfb|ENSMUSG00000062014.14|glia maturation factor, beta
mm39_v1_chr10_+_111000613_111000627	2.30156	AUGGCUU	ENSMUST00000105275.9|Osbpl8|ENSMUSG00000020189.16|oxysterol binding protein-like 8
mm39_v1_chr4_+_129030710_129030792	2.29409	AUGGCUU	ENSMUST00000102600.4|Fndc5|ENSMUSG00000001334.10|fibronectin type III domain containing 5
mm39_v1_chr10_-_20600797_20600824	2.26062	AUGGCUU	ENSMUST00000020165.14|Pde7b|ENSMUSG00000019990.16|phosphodiesterase 7B
mm39_v1_chr1_-_171023798_171023837	2.23798	AUGGCUU	ENSMUST00000111332.2|Pcp4l1|ENSMUSG00000038370.7|Purkinje cell protein 4-like 1
mm39_v1_chr8_+_110595216_110595243	2.23317	AUGGCUU	ENSMUST00000179721.8|Phlpp2|ENSMUSG00000031732.13|PH domain and leucine rich repeat protein phosphatase 2	ENSMUST00000034175.5|Phlpp2|ENSMUSG00000031732.13|PH domain and leucine rich repeat protein phosphatase 2
mm39_v1_chrX_-_142716200_142716307	2.13473	AUGGCUU	ENSMUST00000112851.8|Dcx|ENSMUSG00000031285.15|doublecortin	ENSMUST00000112856.3|Dcx|ENSMUSG00000031285.15|doublecortin	ENSMUST00000033642.10|Dcx|ENSMUSG00000031285.15|doublecortin
mm39_v1_chr14_-_60324265_60324374	2.12344	AUGGCUU	ENSMUST00000080368.13|Atp8a2|ENSMUSG00000021983.17|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
mm39_v1_chr5_-_108022900_108022973	2.10409	AUGGCUU	ENSMUST00000138111.8|Evi5|ENSMUSG00000011831.17|ecotropic viral integration site 5	ENSMUST00000112642.8|Evi5|ENSMUSG00000011831.17|ecotropic viral integration site 5
mm39_v1_chr6_+_140568366_140568389	2.09623	AUGGCUU	ENSMUST00000032359.15|Aebp2|ENSMUSG00000030232.19|AE binding protein 2
mm39_v1_chr17_+_50816296_50816431	2.09201	AUGGCUU	ENSMUST00000043938.8|Plcl2|ENSMUSG00000038910.8|phospholipase C-like 2
mm39_v1_chr1_-_105284383_105284402	1.98874	AUGGCUU	ENSMUST00000058688.7|Rnf152|ENSMUSG00000047496.7|ring finger protein 152
mm39_v1_chr2_+_151384403_151384423	1.97416	AUGGCUU	ENSMUST00000044011.12|Fkbp1a|ENSMUSG00000032966.15|FK506 binding protein 1a
mm39_v1_chr5_-_143166476_143166552	1.89459	AUGGCUU	ENSMUST00000049861.11|Rbak|ENSMUSG00000061898.11|RB-associated KRAB zinc finger	ENSMUST00000165318.4|Rbak|ENSMUSG00000061898.11|RB-associated KRAB zinc finger
mm39_v1_chr19_+_42158995_42159096	1.86045	AUGGCUU	ENSMUST00000169536.8|Zfyve27|ENSMUSG00000018820.14|zinc finger, FYVE domain containing 27	ENSMUST00000099443.11|Zfyve27|ENSMUSG00000018820.14|zinc finger, FYVE domain containing 27
mm39_v1_chr11_+_103664976_103665020	1.82867	AUGGCUU	ENSMUST00000000127.6|Wnt3|ENSMUSG00000000125.6|wingless-type MMTV integration site family, member 3
mm39_v1_chr1_+_166828982_166828999	1.82101	AUGGCUU	ENSMUST00000165874.8|Fam78b|ENSMUSG00000060568.15|family with sequence similarity 78, member B	ENSMUST00000190081.7|Fam78b|ENSMUSG00000060568.15|family with sequence similarity 78, member B
mm39_v1_chr6_-_38230890_38231089	1.79869	AUGGCUU	ENSMUST00000117556.8|D630045J12Rik|ENSMUSG00000063455.17|RIKEN cDNA D630045J12 gene	ENSMUST00000169256.5|D630045J12Rik|ENSMUSG00000063455.17|RIKEN cDNA D630045J12 gene
mm39_v1_chr7_+_24967094_24967148	1.79296	AUGGCUU	ENSMUST00000169266.8|Cic|ENSMUSG00000005442.14|capicua transcriptional repressor
mm39_v1_chr2_+_154498917_154499100	1.78771	AUGGCUU	ENSMUST00000044277.10|Chmp4b|ENSMUSG00000038467.16|charged multivesicular body protein 4B
mm39_v1_chr15_-_77191079_77191128	1.75005	AUGGCUU	ENSMUST00000171751.10|Rbfox2|ENSMUSG00000033565.19|RNA binding protein, fox-1 homolog (C. elegans) 2
mm39_v1_chr8_+_77626400_77626456	1.72325	AUGGCUU	ENSMUST00000109913.9|Nr3c2|ENSMUSG00000031618.14|nuclear receptor subfamily 3, group C, member 2
mm39_v1_chr3_-_94794256_94794272	1.7072	AUGGCUU	ENSMUST00000005923.7|Psmb4|ENSMUSG00000005779.13|proteasome (prosome, macropain) subunit, beta type 4
mm39_v1_chr1_+_75522902_75522957	1.70441	AUGGCUU	ENSMUST00000124341.8|Slc4a3|ENSMUSG00000006576.17|solute carrier family 4 (anion exchanger), member 3
mm39_v1_chr13_+_16189041_16189060	1.69019	AUGGCUU	ENSMUST00000164993.2|Inhba|ENSMUSG00000041324.15|inhibin beta-A
mm39_v1_chr5_+_138083345_138083410	1.66569	AUGGCUU	ENSMUST00000019660.11|Zkscan1|ENSMUSG00000029729.13|zinc finger with KRAB and SCAN domains 1	ENSMUST00000066617.12|Zkscan1|ENSMUSG00000029729.13|zinc finger with KRAB and SCAN domains 1	ENSMUST00000110963.8|Zkscan1|ENSMUSG00000029729.13|zinc finger with KRAB and SCAN domains 1
mm39_v1_chr18_-_61310066_61310129	1.56887	AUGGCUU	ENSMUST00000235480.2|Hmgxb3|ENSMUSG00000024622.9|HMG box domain containing 3	ENSMUST00000091884.6|Hmgxb3|ENSMUSG00000024622.9|HMG box domain containing 3
mm39_v1_chrX_-_56438380_56438400	1.54875	AUGGCUU	ENSMUST00000143310.2|Rbmx|ENSMUSG00000031134.17|RNA binding motif protein, X chromosome	ENSMUST00000098470.9|Rbmx|ENSMUSG00000031134.17|RNA binding motif protein, X chromosome	ENSMUST00000114726.8|Rbmx|ENSMUSG00000031134.17|RNA binding motif protein, X chromosome
mm39_v1_chr1_+_37338964_37339022	1.54029	AUGGCUU	ENSMUST00000027287.11|Inpp4a|ENSMUSG00000026113.18|inositol polyphosphate-4-phosphatase, type I	ENSMUST00000140264.8|Inpp4a|ENSMUSG00000026113.18|inositol polyphosphate-4-phosphatase, type I
mm39_v1_chr10_+_83379805_83379873	1.53789	AUGGCUU	ENSMUST00000038388.7|Washc4|ENSMUSG00000034560.7|WASH complex subunit 4
mm39_v1_chr8_-_110335255_110335305	1.52419	AUGGCUU	ENSMUST00000123605.9|Dhodh|ENSMUSG00000031730.19|dihydroorotate dehydrogenase	ENSMUST00000143900.8|Dhodh|ENSMUSG00000031730.19|dihydroorotate dehydrogenase	ENSMUST00000128350.3|Dhodh|ENSMUSG00000031730.19|dihydroorotate dehydrogenase
mm39_v1_chr6_+_63232955_63233024	1.51997	AUGGCUU	ENSMUST00000095852.5|Grid2|ENSMUSG00000071424.11|glutamate receptor, ionotropic, delta 2
mm39_v1_chr13_+_104315301_104315374	1.51734	AUGGCUU	ENSMUST00000022225.12|Trim23|ENSMUSG00000021712.16|tripartite motif-containing 23	ENSMUST00000069187.12|Trim23|ENSMUSG00000021712.16|tripartite motif-containing 23
mm39_v1_chr1_+_92759324_92759367	1.49289	AUGGCUU	ENSMUST00000045970.8|Gpc1|ENSMUSG00000034220.8|glypican 1
mm39_v1_chr3_-_50398027_50398063	1.48971	AUGGCUU	ENSMUST00000029297.6|Slc7a11|ENSMUSG00000027737.11|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	ENSMUST00000194462.6|Slc7a11|ENSMUSG00000027737.11|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
mm39_v1_chr16_+_32882882_32882919	1.48453	AUGGCUU	ENSMUST00000023497.3|Lmln|ENSMUSG00000022802.3|leishmanolysin-like (metallopeptidase M8 family)
mm39_v1_chr4_+_100926170_100926185	1.47458	AUGGCUU	ENSMUST00000106955.2|Raver2|ENSMUSG00000035275.15|ribonucleoprotein, PTB-binding 2	ENSMUST00000038463.15|Raver2|ENSMUSG00000035275.15|ribonucleoprotein, PTB-binding 2
mm39_v1_chr5_-_124465946_124466035	1.47029	AUGGCUU	ENSMUST00000031344.13|Mphosph9|ENSMUSG00000038126.18|M-phase phosphoprotein 9
mm39_v1_chr7_+_18725170_18725244	1.42383	AUGGCUU	ENSMUST00000059331.9|Mypop|ENSMUSG00000048481.16|Myb-related transcription factor, partner of profilin	ENSMUST00000131087.2|Mypop|ENSMUSG00000048481.16|Myb-related transcription factor, partner of profilin
mm39_v1_chr7_+_28092370_28092418	1.37915	AUGGCUU	ENSMUST00000003529.9|Paf1|ENSMUSG00000003437.15|Paf1, RNA polymerase II complex component
mm39_v1_chr9_+_109760528_109760554	1.37563	AUGGCUU	ENSMUST00000035055.15|Map4|ENSMUSG00000032479.16|microtubule-associated protein 4
mm39_v1_chr9_-_103940247_103940345	1.37375	AUGGCUU	ENSMUST00000035166.12|Uba5|ENSMUSG00000032557.14|ubiquitin-like modifier activating enzyme 5
mm39_v1_chr14_-_47805861_47805896	1.35443	AUGGCUU	ENSMUST00000228784.2|Atg14|ENSMUSG00000037526.8|autophagy related 14	ENSMUST00000042988.7|Atg14|ENSMUSG00000037526.8|autophagy related 14
mm39_v1_chr1_+_184936306_184936383	1.35063	AUGGCUU	ENSMUST00000194740.6|Rab3gap2|ENSMUSG00000039318.13|RAB3 GTPase activating protein subunit 2	ENSMUST00000069652.8|Rab3gap2|ENSMUSG00000039318.13|RAB3 GTPase activating protein subunit 2
mm39_v1_chr18_+_44513547_44513644	1.3009	AUGGCUU	ENSMUST00000202306.2|Dcp2|ENSMUSG00000024472.10|decapping mRNA 2	ENSMUST00000025350.10|Dcp2|ENSMUSG00000024472.10|decapping mRNA 2
mm39_v1_chr9_-_106035308_106035331	1.27795	AUGGCUU	ENSMUST00000159809.2|Glyctk|ENSMUSG00000020258.17|glycerate kinase	ENSMUST00000162562.2|Glyctk|ENSMUSG00000020258.17|glycerate kinase	ENSMUST00000036382.13|Glyctk|ENSMUSG00000020258.17|glycerate kinase
mm39_v1_chr5_+_73648368_73648452	1.27178	AUGGCUU	ENSMUST00000113558.8|Dcun1d4|ENSMUSG00000051674.16|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	ENSMUST00000063882.12|Dcun1d4|ENSMUSG00000051674.16|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
mm39_v1_chr4_+_28813125_28813139	1.26248	AUGGCUU	ENSMUST00000080934.11|Epha7|ENSMUSG00000028289.13|Eph receptor A7	ENSMUST00000029964.12|Epha7|ENSMUSG00000028289.13|Eph receptor A7
mm39_v1_chr8_-_125390107_125390122	1.25964	AUGGCUU	ENSMUST00000034464.8|2310022B05Rik|ENSMUSG00000031983.8|RIKEN cDNA 2310022B05 gene
mm39_v1_chrX_-_149879501_149879539	1.25472	AUGGCUU	ENSMUST00000112683.9|Tsr2|ENSMUSG00000025264.13|TSR2 20S rRNA accumulation	ENSMUST00000026295.10|Tsr2|ENSMUSG00000025264.13|TSR2 20S rRNA accumulation
mm39_v1_chr12_+_73948143_73948166	1.23939	AUGGCUU	ENSMUST00000110461.8|Hif1a|ENSMUSG00000021109.14|hypoxia inducible factor 1, alpha subunit
mm39_v1_chr11_+_75623695_75623795	1.23126	AUGGCUU	ENSMUST00000067664.10|Ywhae|ENSMUSG00000020849.14|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm39_v1_chr4_+_17853452_17853474	1.23075	AUGGCUU	ENSMUST00000029881.10|Mmp16|ENSMUSG00000028226.16|matrix metallopeptidase 16
mm39_v1_chr18_-_15196612_15196675	1.22807	AUGGCUU	ENSMUST00000168989.9|Kctd1|ENSMUSG00000036225.16|potassium channel tetramerisation domain containing 1
mm39_v1_chr6_-_72416531_72416548	1.22276	AUGGCUU	ENSMUST00000205335.2|Mat2a|ENSMUSG00000053907.11|methionine adenosyltransferase II, alpha	ENSMUST00000206692.2|Mat2a|ENSMUSG00000053907.11|methionine adenosyltransferase II, alpha	ENSMUST00000059472.10|Mat2a|ENSMUSG00000053907.11|methionine adenosyltransferase II, alpha
mm39_v1_chr3_+_30847024_30847024	1.21717	AUGGCUU	ENSMUST00000029256.9|Sec62|ENSMUSG00000027706.9|SEC62 homolog (S. cerevisiae)
mm39_v1_chr14_+_5894220_5894254	1.20962	AUGGCUU	ENSMUST00000063750.8|Rarb|ENSMUSG00000017491.10|retinoic acid receptor, beta
mm39_v1_chr1_-_182169150_182169190	1.1177	AUGGCUU	ENSMUST00000051431.10|Fbxo28|ENSMUSG00000047539.10|F-box protein 28
mm39_v1_chr3_-_107603778_107603890	1.08814	AUGGCUU	ENSMUST00000029490.15|Ahcyl1|ENSMUSG00000027893.15|S-adenosylhomocysteine hydrolase-like 1
mm39_v1_chr13_-_89890609_89890634	1.08376	AUGGCUU	ENSMUST00000109546.9|Vcan|ENSMUSG00000021614.17|versican
mm39_v1_chr8_-_84963653_84963694	1.06949	AUGGCUU	ENSMUST00000039480.7|Zswim4|ENSMUSG00000035671.7|zinc finger SWIM-type containing 4
mm39_v1_chr2_-_150450402_150450500	1.02687	AUGGCUU	ENSMUST00000046399.7|Apmap|ENSMUSG00000033096.8|adipocyte plasma membrane associated protein
mm39_v1_chr6_+_146626455_146626502	1.0079	AUGGCUU	ENSMUST00000001675.14|Stk38l|ENSMUSG00000001630.14|serine/threonine kinase 38 like
mm39_v1_chr3_-_119576911_119577037	1.00322	AUGGCUU	ENSMUST00000197464.5|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2	ENSMUST00000198403.2|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2	ENSMUST00000029780.12|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2
mm39_v1_chr9_+_94551929_94551984	1.00085	AUGGCUU	ENSMUST00000033463.10|Slc9a9|ENSMUSG00000031129.10|solute carrier family 9 (sodium/hydrogen exchanger), member 9
mm39_v1_chr1_-_164285914_164285932	0.979817	AUGGCUU	ENSMUST00000027863.13|Atp1b1|ENSMUSG00000026576.13|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm39_v1_chr14_+_69574623_69574647	0.979418	AUGGCUU	ENSMUST00000184973.8|Entpd4|ENSMUSG00000095463.9|ectonucleoside triphosphate diphosphohydrolase 4	ENSMUST00000184314.8|Entpd4|ENSMUSG00000095463.9|ectonucleoside triphosphate diphosphohydrolase 4
mm39_v1_chr9_-_44024767_44024824	0.970205	AUGGCUU	ENSMUST00000216511.2|Rnf26|ENSMUSG00000053128.16|ring finger protein 26	ENSMUST00000185479.2|Gm49380|ENSMUSG00000111409.2|predicted gene, 49380	ENSMUST00000056328.6|Rnf26|ENSMUSG00000053128.16|ring finger protein 26
mm39_v1_chr14_-_4808744_4808823	0.954039	AUGGCUU	ENSMUST00000022303.17|Thrb|ENSMUSG00000021779.20|thyroid hormone receptor beta	ENSMUST00000091471.12|Thrb|ENSMUSG00000021779.20|thyroid hormone receptor beta
mm39_v1_chr3_-_133250129_133250174	0.907677	AUGGCUU	ENSMUST00000196398.5|Tet2|ENSMUSG00000040943.13|tet methylcytosine dioxygenase 2	ENSMUST00000098603.8|Tet2|ENSMUSG00000040943.13|tet methylcytosine dioxygenase 2
mm39_v1_chr16_+_72460029_72460077	0.879228	AUGGCUU	ENSMUST00000023600.8|Robo1|ENSMUSG00000022883.12|roundabout guidance receptor 1
mm39_v1_chr9_+_59658156_59658205	0.857204	AUGGCUU	ENSMUST00000136740.8|Myo9a|ENSMUSG00000039585.16|myosin IXa	ENSMUST00000135298.8|Myo9a|ENSMUSG00000039585.16|myosin IXa	ENSMUST00000128341.2|Myo9a|ENSMUSG00000039585.16|myosin IXa
mm39_v1_chr4_-_141518202_141518252	0.838353	AUGGCUU	ENSMUST00000038014.11|Dnajc16|ENSMUSG00000040697.11|DnaJ heat shock protein family (Hsp40) member C16	ENSMUST00000153880.2|Dnajc16|ENSMUSG00000040697.11|DnaJ heat shock protein family (Hsp40) member C16
mm39_v1_chr13_+_9326513_9326657	0.834873	AUGGCUU	ENSMUST00000174552.8|Dip2c|ENSMUSG00000048264.17|disco interacting protein 2 homolog C
mm39_v1_chr5_-_68004743_68004781	0.827045	AUGGCUU	ENSMUST00000072971.13|Atp8a1|ENSMUSG00000037685.16|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	ENSMUST00000113652.8|Atp8a1|ENSMUSG00000037685.16|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	ENSMUST00000113651.8|Atp8a1|ENSMUSG00000037685.16|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	ENSMUST00000037380.15|Atp8a1|ENSMUSG00000037685.16|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
mm39_v1_chr15_-_64184485_64184537	0.825739	AUGGCUU	ENSMUST00000177083.8|Asap1|ENSMUSG00000022377.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain1	ENSMUST00000177371.8|Asap1|ENSMUSG00000022377.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain1
mm39_v1_chr14_+_55120875_55120972	0.817778	AUGGCUU	ENSMUST00000134077.2|Gm20521|ENSMUSG00000092232.2|predicted gene 20521	ENSMUST00000172844.8|Bcl2l2|ENSMUSG00000089682.11|BCL2-like 2	ENSMUST00000133397.4|Bcl2l2|ENSMUSG00000089682.11|BCL2-like 2	ENSMUST00000227108.2|Bcl2l2|ENSMUSG00000089682.11|BCL2-like 2
mm39_v1_chr15_+_9140685_9140752	0.812789	AUGGCUU	ENSMUST00000090380.6|Lmbrd2|ENSMUSG00000039704.9|LMBR1 domain containing 2
mm39_v1_chr10_+_58091287_58091361	0.794199	AUGGCUU	ENSMUST00000057659.14|Gcc2|ENSMUSG00000038039.14|GRIP and coiled-coil domain containing 2	ENSMUST00000162041.8|Gcc2|ENSMUSG00000038039.14|GRIP and coiled-coil domain containing 2	ENSMUST00000162860.8|Gcc2|ENSMUSG00000038039.14|GRIP and coiled-coil domain containing 2
mm39_v1_chr10_-_121422635_121422708	0.763525	AUGGCUU	ENSMUST00000219493.2|Tbk1|ENSMUSG00000020115.4|TANK-binding kinase 1	ENSMUST00000020316.4|Tbk1|ENSMUSG00000020115.4|TANK-binding kinase 1
mm39_v1_chr4_-_9643636_9643717	0.76112	AUGGCUU	ENSMUST00000108333.8|Asph|ENSMUSG00000028207.19|aspartate-beta-hydroxylase	ENSMUST00000108334.8|Asph|ENSMUSG00000028207.19|aspartate-beta-hydroxylase	ENSMUST00000108335.8|Asph|ENSMUSG00000028207.19|aspartate-beta-hydroxylase	ENSMUST00000152526.8|Asph|ENSMUSG00000028207.19|aspartate-beta-hydroxylase	ENSMUST00000103004.10|Asph|ENSMUSG00000028207.19|aspartate-beta-hydroxylase
mm39_v1_chr5_-_5564730_5564830	0.749681	AUGGCUU	ENSMUST00000115445.8|Cldn12|ENSMUSG00000046798.15|claudin 12	ENSMUST00000179804.8|Cldn12|ENSMUSG00000046798.15|claudin 12	ENSMUST00000125110.2|Cldn12|ENSMUSG00000046798.15|claudin 12	ENSMUST00000115446.8|Cldn12|ENSMUSG00000046798.15|claudin 12
mm39_v1_chr14_+_69792873_69792897	0.745251	AUGGCUU	ENSMUST00000185072.8|Entpd4b|ENSMUSG00000022066.17|ectonucleoside triphosphate diphosphohydrolase 4B	ENSMUST00000064846.8|Entpd4b|ENSMUSG00000022066.17|ectonucleoside triphosphate diphosphohydrolase 4B
mm39_v1_chr11_-_121245251_121245271	0.695663	AUGGCUU	ENSMUST00000026173.13|Wdr45b|ENSMUSG00000025173.14|WD repeat domain 45B
mm39_v1_chr15_-_73295029_73295068	0.686137	AUGGCUU	ENSMUST00000239146.2|Ptk2|ENSMUSG00000022607.19|PTK2 protein tyrosine kinase 2	ENSMUST00000110036.11|Ptk2|ENSMUSG00000022607.19|PTK2 protein tyrosine kinase 2	ENSMUST00000228180.3|Ptk2|ENSMUSG00000022607.19|PTK2 protein tyrosine kinase 2
mm39_v1_chr3_-_10396418_10396499	0.67344	AUGGCUU	ENSMUST00000191670.6|Impa1|ENSMUSG00000027531.17|inositol (myo)-1(or 4)-monophosphatase 1	ENSMUST00000065938.15|Impa1|ENSMUSG00000027531.17|inositol (myo)-1(or 4)-monophosphatase 1	ENSMUST00000118410.8|Impa1|ENSMUSG00000027531.17|inositol (myo)-1(or 4)-monophosphatase 1
mm39_v1_chr4_-_126323291_126323349	0.670976	AUGGCUU	ENSMUST00000069097.13|Ago3|ENSMUSG00000028842.16|argonaute RISC catalytic subunit 3
mm39_v1_chr11_-_94212783_94212814	0.669889	AUGGCUU	ENSMUST00000166312.8|Luc7l3|ENSMUSG00000020863.16|LUC7-like 3 (S. cerevisiae)	ENSMUST00000107821.9|Luc7l3|ENSMUSG00000020863.16|LUC7-like 3 (S. cerevisiae)	ENSMUST00000021226.14|Luc7l3|ENSMUSG00000020863.16|LUC7-like 3 (S. cerevisiae)	ENSMUST00000107820.2|Luc7l3|ENSMUSG00000020863.16|LUC7-like 3 (S. cerevisiae)
mm39_v1_chr9_+_53448322_53448374	0.657678	AUGGCUU	ENSMUST00000035850.8|Npat|ENSMUSG00000033054.8|nuclear protein in the AT region
mm39_v1_chr3_-_59251573_59251677	0.644646	AUGGCUU	ENSMUST00000193455.6|Igsf10|ENSMUSG00000036334.13|immunoglobulin superfamily, member 10	ENSMUST00000039419.12|Igsf10|ENSMUSG00000036334.13|immunoglobulin superfamily, member 10	ENSMUST00000195983.2|Igsf10|ENSMUSG00000036334.13|immunoglobulin superfamily, member 10
mm39_v1_chr12_-_103208402_103208409	0.643426	AUGGCUU	ENSMUST00000074416.10|Prima1|ENSMUSG00000041669.16|proline rich membrane anchor 1
mm39_v1_chr4_-_35845204_35845204	0.6324	AUGGCUU	ENSMUST00000164772.8|Lingo2|ENSMUSG00000045083.15|leucine rich repeat and Ig domain containing 2	ENSMUST00000065173.9|Lingo2|ENSMUSG00000045083.15|leucine rich repeat and Ig domain containing 2
mm39_v1_chr4_-_149783097_149783165	0.63112	AUGGCUU	ENSMUST00000038859.14|Pik3cd|ENSMUSG00000039936.19|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta	ENSMUST00000105690.9|Pik3cd|ENSMUSG00000039936.19|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
mm39_v1_chr8_-_110464345_110464418	0.624606	AUGGCUU	ENSMUST00000212605.2|Atxn1l|ENSMUSG00000069895.5|ataxin 1-like	ENSMUST00000093162.4|Atxn1l|ENSMUSG00000069895.5|ataxin 1-like	ENSMUST00000212726.2|Atxn1l|ENSMUSG00000069895.5|ataxin 1-like
mm39_v1_chr15_+_78761360_78761396	0.600469	AUGGCUU	ENSMUST00000041587.8|Gga1|ENSMUSG00000033128.10|golgi associated, gamma adaptin ear containing, ARF binding protein 1
mm39_v1_chr2_-_124965537_124965581	0.592221	AUGGCUU	ENSMUST00000142718.8|Myef2|ENSMUSG00000027201.17|myelin basic protein expression factor 2, repressor	ENSMUST00000152367.8|Myef2|ENSMUSG00000027201.17|myelin basic protein expression factor 2, repressor	ENSMUST00000067780.10|Myef2|ENSMUSG00000027201.17|myelin basic protein expression factor 2, repressor	ENSMUST00000147105.8|Myef2|ENSMUSG00000027201.17|myelin basic protein expression factor 2, repressor
mm39_v1_chr8_+_106002772_106002772	0.58674	AUGGCUU	ENSMUST00000014920.8|Nol3|ENSMUSG00000014776.8|nucleolar protein 3 (apoptosis repressor with CARD domain)
mm39_v1_chr12_+_110452222_110452293	0.581032	AUGGCUU	ENSMUST00000084985.11|Ppp2r5c|ENSMUSG00000017843.15|protein phosphatase 2, regulatory subunit B', gamma	ENSMUST00000221074.2|Ppp2r5c|ENSMUSG00000017843.15|protein phosphatase 2, regulatory subunit B', gamma
mm39_v1_chrX_-_162859095_162859125	0.549755	AUGGCUU	ENSMUST00000037928.9|Siah1b|ENSMUSG00000040749.12|siah E3 ubiquitin protein ligase 1B
mm39_v1_chr15_-_28025920_28025970	0.548178	AUGGCUU	ENSMUST00000090247.7|Trio|ENSMUSG00000022263.11|triple functional domain (PTPRF interacting)
mm39_v1_chr11_-_65679101_65679147	0.534568	AUGGCUU	ENSMUST00000152096.8|Map2k4|ENSMUSG00000033352.12|mitogen-activated protein kinase kinase 4	ENSMUST00000046963.10|Map2k4|ENSMUSG00000033352.12|mitogen-activated protein kinase kinase 4
mm39_v1_chr14_+_58035614_58035637	0.52994	AUGGCUU	ENSMUST00000128764.9|Sap18|ENSMUSG00000021963.18|Sin3-associated polypeptide 18
mm39_v1_chr1_+_127701901_127701975	0.503743	AUGGCUU	ENSMUST00000112570.2|Ccnt2|ENSMUSG00000026349.15|cyclin T2	ENSMUST00000027587.15|Ccnt2|ENSMUSG00000026349.15|cyclin T2
mm39_v1_chr2_-_130471891_130471958	0.488081	AUGGCUU	ENSMUST00000110262.3|Fastkd5|ENSMUSG00000079043.4|FAST kinase domains 5	ENSMUST00000028761.5|Ubox5|ENSMUSG00000027300.11|U box domain containing 5
mm39_v1_chr19_+_44919585_44919613	0.455459	AUGGCUU	ENSMUST00000096053.5|Slf2|ENSMUSG00000036097.9|SMC5-SMC6 complex localization factor 2
mm39_v1_chr3_-_127574167_127574178	0.432741	AUGGCUU	ENSMUST00000029662.12|Alpk1|ENSMUSG00000028028.12|alpha-kinase 1
mm39_v1_chr2_+_166647426_166647525	0.406509	AUGGCUU	ENSMUST00000099078.10|Arfgef2|ENSMUSG00000074582.11|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
mm39_v1_chr1_+_191449946_191450017	0.393163	AUGGCUU	ENSMUST00000133076.7|Lpgat1|ENSMUSG00000026623.17|lysophosphatidylglycerol acyltransferase 1	ENSMUST00000110855.8|Lpgat1|ENSMUSG00000026623.17|lysophosphatidylglycerol acyltransferase 1
mm39_v1_chr18_-_61919707_61919773	0.366276	AUGGCUU	ENSMUST00000120472.2|Afap1l1|ENSMUSG00000033032.16|actin filament associated protein 1-like 1
mm39_v1_chr11_+_120123727_120123779	0.361503	AUGGCUU	ENSMUST00000122148.8|Bahcc1|ENSMUSG00000039741.16|BAH domain and coiled-coil containing 1	ENSMUST00000044985.14|Bahcc1|ENSMUSG00000039741.16|BAH domain and coiled-coil containing 1
mm39_v1_chr16_+_51851588_51851705	0.327775	AUGGCUU	ENSMUST00000114471.3|Cblb|ENSMUSG00000022637.12|Casitas B-lineage lymphoma b
mm39_v1_chr5_+_30971915_30971985	0.267636	AUGGCUU	ENSMUST00000031058.15|Mapre3|ENSMUSG00000029166.15|microtubule-associated protein, RP/EB family, member 3
mm39_v1_chr6_-_148113872_148113889	0.264681	AUGGCUU	ENSMUST00000136008.8|Ergic2|ENSMUSG00000030304.12|ERGIC and golgi 2
mm39_v1_chr16_-_13485986_13486045	0.259461	AUGGCUU	ENSMUST00000058884.10|Parn|ENSMUSG00000022685.10|poly(A)-specific ribonuclease (deadenylation nuclease)
mm39_v1_chr3_+_126390600_126390688	0.243062	AUGGCUU	ENSMUST00000106402.8|Camk2d|ENSMUSG00000053819.17|calcium/calmodulin-dependent protein kinase II, delta	ENSMUST00000106399.8|Camk2d|ENSMUSG00000053819.17|calcium/calmodulin-dependent protein kinase II, delta	ENSMUST00000066466.13|Camk2d|ENSMUSG00000053819.17|calcium/calmodulin-dependent protein kinase II, delta	ENSMUST00000163226.8|Camk2d|ENSMUSG00000053819.17|calcium/calmodulin-dependent protein kinase II, delta	ENSMUST00000199300.5|Camk2d|ENSMUSG00000053819.17|calcium/calmodulin-dependent protein kinase II, delta
mm39_v1_chr1_-_156767123_156767186	0.225813	AUGGCUU	ENSMUST00000189316.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000190648.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000172057.8|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000191605.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2
mm39_v1_chr2_-_160714473_160714542	0.218656	AUGGCUU	ENSMUST00000103111.9|Zhx3|ENSMUSG00000035877.18|zinc fingers and homeoboxes 3
mm39_v1_chr9_+_23134372_23134372	0.209278	AUGGCUU	ENSMUST00000071982.7|Bmper|ENSMUSG00000031963.9|BMP-binding endothelial regulator
mm39_v1_chr11_+_95715295_95715376	0.207079	AUGGCUU	ENSMUST00000150134.2|Phospho1|ENSMUSG00000050860.7|phosphatase, orphan 1	ENSMUST00000054173.4|Phospho1|ENSMUSG00000050860.7|phosphatase, orphan 1
mm39_v1_chr15_-_81900335_81900372	0.203281	AUGGCUU	ENSMUST00000152227.8|Desi1|ENSMUSG00000022472.17|desumoylating isopeptidase 1
mm39_v1_chr9_+_78020554_78020659	0.190896	AUGGCUU	ENSMUST00000009972.6|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1	ENSMUST00000117330.8|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1	ENSMUST00000044551.8|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1
mm39_v1_chr16_-_21513317_21513415	0.189635	AUGGCUU	ENSMUST00000231592.2|2510009E07Rik|ENSMUSG00000043391.11|RIKEN cDNA 2510009E07 gene	ENSMUST00000053336.8|2510009E07Rik|ENSMUSG00000043391.11|RIKEN cDNA 2510009E07 gene
mm39_v1_chr11_-_86148344_86148376	0.179593	AUGGCUU	ENSMUST00000136469.2|Ints2|ENSMUSG00000018068.14|integrator complex subunit 2	ENSMUST00000018212.13|Ints2|ENSMUSG00000018068.14|integrator complex subunit 2
mm39_v1_chr12_-_100691251_100691287	0.176294	AUGGCUU	ENSMUST00000043599.7|Rps6ka5|ENSMUSG00000021180.10|ribosomal protein S6 kinase, polypeptide 5
mm39_v1_chr10_-_126906123_126906143	0.173337	AUGGCUU	ENSMUST00000060991.6|Tspan31|ENSMUSG00000006736.10|tetraspanin 31
mm39_v1_chr12_-_4527138_4527196	0.168517	AUGGCUU	ENSMUST00000085814.5|Ncoa1|ENSMUSG00000020647.11|nuclear receptor coactivator 1
mm39_v1_chr17_-_24863956_24863969	0.158252	AUGGCUU	ENSMUST00000019684.13|Slc9a3r2|ENSMUSG00000002504.16|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
mm39_v1_chr14_-_110992533_110992584	0.147555	AUGGCUU	ENSMUST00000078386.4|Slitrk6|ENSMUSG00000045871.6|SLIT and NTRK-like family, member 6
mm39_v1_chr10_-_80492315_80492357	0.141536	AUGGCUU	ENSMUST00000126980.8|Btbd2|ENSMUSG00000003344.15|BTB (POZ) domain containing 2
mm39_v1_chr6_-_83418656_83418666	0.13229	AUGGCUU	ENSMUST00000089622.11|Tet3|ENSMUSG00000034832.16|tet methylcytosine dioxygenase 3
mm39_v1_chr12_+_16944896_16944904	0.114375	AUGGCUU	ENSMUST00000020904.8|Rock2|ENSMUSG00000020580.11|Rho-associated coiled-coil containing protein kinase 2
mm39_v1_chr2_+_32617671_32617727	0.113288	AUGGCUU	ENSMUST00000113242.5|Sh2d3c|ENSMUSG00000059013.13|SH2 domain containing 3C
mm39_v1_chr7_-_131012202_131012250	0.0652183	AUGGCUU	ENSMUST00000207243.2|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5	ENSMUST00000128432.3|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5	ENSMUST00000121033.8|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5	ENSMUST00000046306.15|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5
mm39_v1_chrX_+_152020744_152020838	0.0651602	AUGGCUU	ENSMUST00000112574.9|Klf8|ENSMUSG00000041649.14|Kruppel-like factor 8
mm39_v1_chr19_+_36532061_36532115	0.0591871	AUGGCUU	ENSMUST00000169036.9|Hectd2|ENSMUSG00000041180.14|HECT domain E3 ubiquitin protein ligase 2	ENSMUST00000047247.12|Hectd2|ENSMUSG00000041180.14|HECT domain E3 ubiquitin protein ligase 2
mm39_v1_chr9_+_56902172_56902207	0.055637	AUGGCUU	ENSMUST00000034832.8|Ptpn9|ENSMUSG00000032290.8|protein tyrosine phosphatase, non-receptor type 9
mm39_v1_chrX_+_72716756_72716848	0.0396147	AUGGCUU	ENSMUST00000033752.14|Slc6a8|ENSMUSG00000019558.15|solute carrier family 6 (neurotransmitter transporter, creatine), member 8	ENSMUST00000114467.9|Slc6a8|ENSMUSG00000019558.15|solute carrier family 6 (neurotransmitter transporter, creatine), member 8
mm39_v1_chr4_+_57845240_57845265	0.022188	AUGGCUU	ENSMUST00000102903.8|Pakap|ENSMUSG00000038729.25|paralemmin A kinase anchor protein	ENSMUST00000107598.9|Pakap|ENSMUSG00000038729.25|paralemmin A kinase anchor protein
mm39_v1_chr4_-_70453140_70453224	0.00913133	AUGGCUU	ENSMUST00000107359.9|Megf9|ENSMUSG00000039270.10|multiple EGF-like-domains 9
mm39_v1_chr6_-_38276157_38276225	0.00483084	AUGGCUU	ENSMUST00000058524.3|Zc3hav1l|ENSMUSG00000047749.3|zinc finger CCCH-type, antiviral 1-like
