mm39_v1_chr13_-_110416637_110416747	3.54038	AUUGCAC	ENSMUST00000167824.3|Rab3c|ENSMUSG00000021700.11|RAB3C, member RAS oncogene family	ENSMUST00000224180.2|Rab3c|ENSMUSG00000021700.11|RAB3C, member RAS oncogene family
mm39_v1_chr14_+_68321302_68321319	3.24908	AUUGCAC	ENSMUST00000022639.8|Nefl|ENSMUSG00000022055.8|neurofilament, light polypeptide
mm39_v1_chr5_-_108697857_108697890	2.75181	AUUGCAC	ENSMUST00000129040.2|Cplx1|ENSMUSG00000033615.10|complexin 1	ENSMUST00000046892.10|Cplx1|ENSMUSG00000033615.10|complexin 1
mm39_v1_chr7_-_111758241_111758303	2.26945	AUUGCAC	ENSMUST00000033036.7|Dkk3|ENSMUSG00000030772.7|dickkopf WNT signaling pathway inhibitor 3
mm39_v1_chr16_-_42160957_42161014	2.24166	AUUGCAC	ENSMUST00000102817.5|Gap43|ENSMUSG00000047261.10|growth associated protein 43
mm39_v1_chr5_+_130477642_130477671	2.22575	AUUGCAC	ENSMUST00000111288.4|Caln1|ENSMUSG00000060371.13|calneuron 1
mm39_v1_chrX_-_71699740_71699795	1.84166	AUUGCAC	ENSMUST00000055966.13|Gabra3|ENSMUSG00000031343.14|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3
mm39_v1_chr7_+_108610032_108610042	1.83906	AUUGCAC	ENSMUST00000033341.12|Tub|ENSMUSG00000031028.15|tubby bipartite transcription factor
mm39_v1_chr4_+_80828883_80828922	1.70756	AUUGCAC	ENSMUST00000055922.4|Lurap1l|ENSMUSG00000048706.4|leucine rich adaptor protein 1-like
mm39_v1_chr1_+_63485002_63485102	1.63863	AUUGCAC	ENSMUST00000087374.10|Adam23|ENSMUSG00000025964.16|a disintegrin and metallopeptidase domain 23
mm39_v1_chr6_+_114259596_114259777	1.62525	AUUGCAC	ENSMUST00000032454.8|Slc6a1|ENSMUSG00000030310.11|solute carrier family 6 (neurotransmitter transporter, GABA), member 1
mm39_v1_chr15_+_91949032_91949052	1.57707	AUUGCAC	ENSMUST00000169825.8|Cntn1|ENSMUSG00000055022.15|contactin 1
mm39_v1_chr2_+_96148418_96148561	1.48219	AUUGCAC	ENSMUST00000135431.8|Lrrc4c|ENSMUSG00000050587.15|leucine rich repeat containing 4C	ENSMUST00000162807.9|Lrrc4c|ENSMUSG00000050587.15|leucine rich repeat containing 4C
mm39_v1_chr6_+_96090127_96090153	1.4612	AUUGCAC	ENSMUST00000122120.8|Tafa1|ENSMUSG00000059187.13|TAFA chemokine like family member 1
mm39_v1_chr5_+_30745447_30745514	1.43755	AUUGCAC	ENSMUST00000066295.5|Kcnk3|ENSMUSG00000049265.9|potassium channel, subfamily K, member 3
mm39_v1_chr6_-_18514801_18514859	1.35433	AUUGCAC	ENSMUST00000090601.12|Cttnbp2|ENSMUSG00000000416.17|cortactin binding protein 2
mm39_v1_chr5_-_129030367_129030550	1.35133	AUUGCAC	ENSMUST00000111346.6|Rimbp2|ENSMUSG00000029420.15|RIMS binding protein 2	ENSMUST00000200470.5|Rimbp2|ENSMUSG00000029420.15|RIMS binding protein 2
mm39_v1_chr9_+_74978429_74978511	1.33807	AUUGCAC	ENSMUST00000123128.8|Myo5a|ENSMUSG00000034593.17|myosin VA
mm39_v1_chr1_+_143516402_143516488	1.32677	AUUGCAC	ENSMUST00000038252.4|B3galt2|ENSMUSG00000033849.4|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
mm39_v1_chr6_-_28831746_28831746	1.31166	AUUGCAC	ENSMUST00000062304.7|Lrrc4|ENSMUSG00000049939.7|leucine rich repeat containing 4
mm39_v1_chr17_+_26633794_26633939	1.3035	AUUGCAC	ENSMUST00000182897.8|Neurl1b|ENSMUSG00000034413.15|neuralized E3 ubiquitin protein ligase 1B	ENSMUST00000183077.8|Neurl1b|ENSMUSG00000034413.15|neuralized E3 ubiquitin protein ligase 1B	ENSMUST00000053020.8|Neurl1b|ENSMUSG00000034413.15|neuralized E3 ubiquitin protein ligase 1B
mm39_v1_chr2_+_158452651_158452693	1.28301	AUUGCAC	ENSMUST00000045738.5|Slc32a1|ENSMUSG00000037771.12|solute carrier family 32 (GABA vesicular transporter), member 1
mm39_v1_chr19_+_41900360_41900371	1.25927	AUUGCAC	ENSMUST00000011896.8|Pgam1|ENSMUSG00000011752.8|phosphoglycerate mutase 1
mm39_v1_chr19_+_43600738_43600764	1.24183	AUUGCAC	ENSMUST00000057178.11|Nkx2-3|ENSMUSG00000044220.14|NK2 homeobox 3
mm39_v1_chr8_+_57774010_57774027	1.24039	AUUGCAC	ENSMUST00000040104.5|Hand2|ENSMUSG00000038193.5|heart and neural crest derivatives expressed 2
mm39_v1_chr6_-_24956296_24956296	1.23894	AUUGCAC	ENSMUST00000127247.4|Tmem229a|ENSMUSG00000048022.12|transmembrane protein 229A
mm39_v1_chr18_-_21785419_21785430	1.21631	AUUGCAC	ENSMUST00000049105.11|Klhl14|ENSMUSG00000042514.12|kelch-like 14
mm39_v1_chr16_-_74208180_74208314	1.21475	AUUGCAC	ENSMUST00000117200.8|Robo2|ENSMUSG00000052516.20|roundabout guidance receptor 2
mm39_v1_chr2_+_24944367_24944403	1.18895	AUUGCAC	ENSMUST00000100334.11|Nsmf|ENSMUSG00000006476.20|NMDA receptor synaptonuclear signaling and neuronal migration factor	ENSMUST00000152122.8|Nsmf|ENSMUSG00000006476.20|NMDA receptor synaptonuclear signaling and neuronal migration factor	ENSMUST00000116574.10|Nsmf|ENSMUSG00000006476.20|NMDA receptor synaptonuclear signaling and neuronal migration factor	ENSMUST00000006646.15|Nsmf|ENSMUSG00000006476.20|NMDA receptor synaptonuclear signaling and neuronal migration factor
mm39_v1_chr3_+_156267429_156267507	1.1865	AUUGCAC	ENSMUST00000074015.11|Negr1|ENSMUSG00000040037.14|neuronal growth regulator 1
mm39_v1_chr2_+_21372338_21372353	1.17553	AUUGCAC	ENSMUST00000055946.8|Gpr158|ENSMUSG00000045967.12|G protein-coupled receptor 158
mm39_v1_chr1_+_174329361_174329410	1.14611	AUUGCAC	ENSMUST00000030039.13|Fmn2|ENSMUSG00000028354.14|formin 2
mm39_v1_chr11_-_103844870_103844882	1.1396	AUUGCAC	ENSMUST00000103075.11|Nsf|ENSMUSG00000034187.19|N-ethylmaleimide sensitive fusion protein
mm39_v1_chr8_+_55407872_55407889	1.13188	AUUGCAC	ENSMUST00000033915.9|Gpm6a|ENSMUSG00000031517.9|glycoprotein m6a
mm39_v1_chr19_+_28812474_28812541	1.06691	AUUGCAC	ENSMUST00000025875.5|Slc1a1|ENSMUSG00000024935.12|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
mm39_v1_chr15_+_80171435_80171453	1.06152	AUUGCAC	ENSMUST00000160424.8|Cacna1i|ENSMUSG00000022416.16|calcium channel, voltage-dependent, alpha 1I subunit
mm39_v1_chr8_+_14145848_14145931	1.04791	AUUGCAC	ENSMUST00000152652.8|Dlgap2|ENSMUSG00000047495.16|DLG associated protein 2	ENSMUST00000133298.8|Dlgap2|ENSMUSG00000047495.16|DLG associated protein 2
mm39_v1_chr6_-_91784405_91784437	1.01389	AUUGCAC	ENSMUST00000162300.8|Grip2|ENSMUSG00000030098.16|glutamate receptor interacting protein 2
mm39_v1_chr13_-_96028412_96028503	1.01259	AUUGCAC	ENSMUST00000068603.8|Iqgap2|ENSMUSG00000021676.11|IQ motif containing GTPase activating protein 2
mm39_v1_chrX_+_40490005_40490181	1.01028	AUUGCAC	ENSMUST00000115103.9|Gria3|ENSMUSG00000001986.17|glutamate receptor, ionotropic, AMPA3 (alpha 3)	ENSMUST00000076349.12|Gria3|ENSMUSG00000001986.17|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm39_v1_chr14_-_68362284_68362305	1.00038	AUUGCAC	ENSMUST00000111089.8|Nefm|ENSMUSG00000022054.12|neurofilament, medium polypeptide	ENSMUST00000022638.6|Nefm|ENSMUSG00000022054.12|neurofilament, medium polypeptide
mm39_v1_chr13_+_94194269_94194323	0.991329	AUUGCAC	ENSMUST00000054274.8|Lhfpl2|ENSMUSG00000045312.13|lipoma HMGIC fusion partner-like 2
mm39_v1_chr2_+_55327110_55327194	0.982478	AUUGCAC	ENSMUST00000112633.3|Kcnj3|ENSMUSG00000026824.12|potassium inwardly-rectifying channel, subfamily J, member 3	ENSMUST00000112632.2|Kcnj3|ENSMUSG00000026824.12|potassium inwardly-rectifying channel, subfamily J, member 3
mm39_v1_chr14_+_111912529_111912556	0.979505	AUUGCAC	ENSMUST00000042767.9|Slitrk5|ENSMUSG00000033214.11|SLIT and NTRK-like family, member 5
mm39_v1_chr17_+_55752485_55752551	0.977134	AUUGCAC	ENSMUST00000025000.4|St6gal2|ENSMUSG00000024172.11|beta galactoside alpha 2,6 sialyltransferase 2
mm39_v1_chr2_-_12306722_12306734	0.965284	AUUGCAC	ENSMUST00000028106.11|Itga8|ENSMUSG00000026768.11|integrin alpha 8
mm39_v1_chr9_-_86762467_86762520	0.963127	AUUGCAC	ENSMUST00000074501.12|Snap91|ENSMUSG00000033419.17|synaptosomal-associated protein 91	ENSMUST00000239074.2|Snap91|ENSMUSG00000033419.17|synaptosomal-associated protein 91	ENSMUST00000098495.10|Snap91|ENSMUSG00000033419.17|synaptosomal-associated protein 91	ENSMUST00000036347.13|Snap91|ENSMUSG00000033419.17|synaptosomal-associated protein 91	ENSMUST00000074468.13|Snap91|ENSMUSG00000033419.17|synaptosomal-associated protein 91
mm39_v1_chr9_-_106533279_106533295	0.932555	AUUGCAC	ENSMUST00000023959.13|Grm2|ENSMUSG00000023192.13|glutamate receptor, metabotropic 2	ENSMUST00000201681.2|Grm2|ENSMUSG00000023192.13|glutamate receptor, metabotropic 2
mm39_v1_chr6_+_108190050_108190065	0.921725	AUUGCAC	ENSMUST00000032192.9|Itpr1|ENSMUSG00000030102.12|inositol 1,4,5-trisphosphate receptor 1
mm39_v1_chr13_-_99653045_99653092	0.91137	AUUGCAC	ENSMUST00000064762.6|Map1b|ENSMUSG00000052727.7|microtubule-associated protein 1B
mm39_v1_chr7_-_100581314_100581413	0.887905	AUUGCAC	ENSMUST00000107032.3|Arhgef17|ENSMUSG00000032875.9|Rho guanine nucleotide exchange factor (GEF) 17
mm39_v1_chr16_+_72460029_72460077	0.887845	AUUGCAC	ENSMUST00000023600.8|Robo1|ENSMUSG00000022883.12|roundabout guidance receptor 1
mm39_v1_chr15_+_18819033_18819048	0.885249	AUUGCAC	ENSMUST00000166873.9|Cdh10|ENSMUSG00000022321.16|cadherin 10
mm39_v1_chr7_-_141009264_141009339	0.873882	AUUGCAC	ENSMUST00000164387.2|Cend1|ENSMUSG00000060240.13|cell cycle exit and neuronal differentiation 1	ENSMUST00000137488.2|Cend1|ENSMUSG00000060240.13|cell cycle exit and neuronal differentiation 1	ENSMUST00000084436.10|Cend1|ENSMUSG00000060240.13|cell cycle exit and neuronal differentiation 1
mm39_v1_chr11_+_56902624_56902653	0.869617	AUUGCAC	ENSMUST00000036315.16|Gria1|ENSMUSG00000020524.17|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm39_v1_chr9_-_83688294_83688337	0.846468	AUUGCAC	ENSMUST00000034796.14|Elovl4|ENSMUSG00000032262.14|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4	ENSMUST00000183614.2|Elovl4|ENSMUSG00000032262.14|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4
mm39_v1_chr9_-_108067552_108067617	0.841224	AUUGCAC	ENSMUST00000035208.14|Bsn|ENSMUSG00000032589.15|bassoon
mm39_v1_chr11_-_119937896_119937955	0.830395	AUUGCAC	ENSMUST00000064307.10|Aatk|ENSMUSG00000025375.16|apoptosis-associated tyrosine kinase
mm39_v1_chr2_+_145009625_145009693	0.829103	AUUGCAC	ENSMUST00000110007.8|Slc24a3|ENSMUSG00000063873.11|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
mm39_v1_chr13_+_54225828_54225928	0.827554	AUUGCAC	ENSMUST00000021930.10|Sfxn1|ENSMUSG00000021474.10|sideroflexin 1
mm39_v1_chr15_-_48655329_48655459	0.816645	AUUGCAC	ENSMUST00000160658.8|Csmd3|ENSMUSG00000022311.16|CUB and Sushi multiple domains 3	ENSMUST00000100670.10|Csmd3|ENSMUSG00000022311.16|CUB and Sushi multiple domains 3	ENSMUST00000162830.8|Csmd3|ENSMUSG00000022311.16|CUB and Sushi multiple domains 3
mm39_v1_chr8_+_66070661_66070743	0.810993	AUUGCAC	ENSMUST00000110258.8|Marchf1|ENSMUSG00000036469.17|membrane associated ring-CH-type finger 1	ENSMUST00000110256.8|Marchf1|ENSMUSG00000036469.17|membrane associated ring-CH-type finger 1	ENSMUST00000110255.8|Marchf1|ENSMUSG00000036469.17|membrane associated ring-CH-type finger 1
mm39_v1_chr11_-_4897991_4898064	0.797581	AUUGCAC	ENSMUST00000093369.5|Nefh|ENSMUSG00000020396.9|neurofilament, heavy polypeptide
mm39_v1_chr1_-_184731672_184731767	0.79635	AUUGCAC	ENSMUST00000192657.2|Mark1|ENSMUSG00000026620.12|MAP/microtubule affinity regulating kinase 1	ENSMUST00000027929.10|Mark1|ENSMUSG00000026620.12|MAP/microtubule affinity regulating kinase 1
mm39_v1_chr1_-_91386976_91387058	0.794741	AUUGCAC	ENSMUST00000069620.10|Per2|ENSMUSG00000055866.10|period circadian clock 2
mm39_v1_chr6_+_4903299_4903347	0.793914	AUUGCAC	ENSMUST00000035813.9|Ppp1r9a|ENSMUSG00000032827.16|protein phosphatase 1, regulatory subunit 9A
mm39_v1_chr8_+_110595216_110595243	0.776447	AUUGCAC	ENSMUST00000179721.8|Phlpp2|ENSMUSG00000031732.13|PH domain and leucine rich repeat protein phosphatase 2	ENSMUST00000034175.5|Phlpp2|ENSMUSG00000031732.13|PH domain and leucine rich repeat protein phosphatase 2
mm39_v1_chr1_-_123973223_123973308	0.77438	AUUGCAC	ENSMUST00000112606.8|Dpp10|ENSMUSG00000036815.18|dipeptidylpeptidase 10
mm39_v1_chr17_+_9020522_9020559	0.75855	AUUGCAC	ENSMUST00000089085.10|Pde10a|ENSMUSG00000023868.18|phosphodiesterase 10A
mm39_v1_chr3_+_107008867_107008883	0.751262	AUUGCAC	ENSMUST00000038695.6|Kcna2|ENSMUSG00000040724.6|potassium voltage-gated channel, shaker-related subfamily, member 2
mm39_v1_chr11_-_57723502_57723644	0.744963	AUUGCAC	ENSMUST00000160392.9|Hand1|ENSMUSG00000037335.14|heart and neural crest derivatives expressed 1	ENSMUST00000108845.3|Hand1|ENSMUSG00000037335.14|heart and neural crest derivatives expressed 1
mm39_v1_chr2_-_171885386_171885386	0.741206	AUUGCAC	ENSMUST00000087950.4|Cbln4|ENSMUSG00000067578.4|cerebellin 4 precursor protein
mm39_v1_chr1_-_189902868_189902942	0.740759	AUUGCAC	ENSMUST00000177288.4|Prox1|ENSMUSG00000010175.14|prospero homeobox 1	ENSMUST00000175916.8|Prox1|ENSMUSG00000010175.14|prospero homeobox 1
mm39_v1_chr10_+_27950809_27950870	0.74047	AUUGCAC	ENSMUST00000166468.2|Ptprk|ENSMUSG00000019889.11|protein tyrosine phosphatase, receptor type, K	ENSMUST00000218359.2|Ptprk|ENSMUSG00000019889.11|protein tyrosine phosphatase, receptor type, K	ENSMUST00000218276.2|Ptprk|ENSMUSG00000019889.11|protein tyrosine phosphatase, receptor type, K
mm39_v1_chr8_-_71938598_71938624	0.733499	AUUGCAC	ENSMUST00000093450.6|Ano8|ENSMUSG00000034863.10|anoctamin 8	ENSMUST00000213382.2|Ano8|ENSMUSG00000034863.10|anoctamin 8
mm39_v1_chr2_+_79465696_79465729	0.728969	AUUGCAC	ENSMUST00000111785.9|Itprid2|ENSMUSG00000027007.17|ITPR interacting domain containing 2
mm39_v1_chr11_-_35871300_35871406	0.723534	AUUGCAC	ENSMUST00000018993.7|Wwc1|ENSMUSG00000018849.7|WW, C2 and coiled-coil domain containing 1
mm39_v1_chr12_+_55883101_55883146	0.717565	AUUGCAC	ENSMUST00000059250.8|Brms1l|ENSMUSG00000012076.9|breast cancer metastasis-suppressor 1-like
mm39_v1_chr6_+_36364990_36365019	0.715654	AUUGCAC	ENSMUST00000172278.8|Chrm2|ENSMUSG00000045613.10|cholinergic receptor, muscarinic 2, cardiac
mm39_v1_chr5_+_32293145_32293201	0.715176	AUUGCAC	ENSMUST00000031017.11|Fosl2|ENSMUSG00000029135.11|fos-like antigen 2
mm39_v1_chr6_+_21215472_21215502	0.714072	AUUGCAC	ENSMUST00000081542.6|Kcnd2|ENSMUSG00000060882.6|potassium voltage-gated channel, Shal-related family, member 2
mm39_v1_chr10_+_81128795_81128839	0.713653	AUUGCAC	ENSMUST00000163075.8|Pip5k1c|ENSMUSG00000034902.18|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma	ENSMUST00000105327.10|Pip5k1c|ENSMUSG00000034902.18|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma	ENSMUST00000045469.15|Pip5k1c|ENSMUSG00000034902.18|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
mm39_v1_chr18_+_59308722_59308722	0.71105	AUUGCAC	ENSMUST00000080721.6|Chsy3|ENSMUSG00000058152.9|chondroitin sulfate synthase 3
mm39_v1_chr1_+_131890679_131890708	0.709886	AUUGCAC	ENSMUST00000191034.2|Gm29103|ENSMUSG00000100037.2|predicted gene 29103	ENSMUST00000177943.8|Slc45a3|ENSMUSG00000026435.16|solute carrier family 45, member 3
mm39_v1_chr6_+_122851433_122851541	0.703207	AUUGCAC	ENSMUST00000032477.6|Necap1|ENSMUSG00000030327.9|NECAP endocytosis associated 1
mm39_v1_chr10_-_22696025_22696073	0.68596	AUUGCAC	ENSMUST00000218002.2|Tcf21|ENSMUSG00000045680.9|transcription factor 21	ENSMUST00000049930.9|Tcf21|ENSMUSG00000045680.9|transcription factor 21
mm39_v1_chr1_-_57011595_57011661	0.684118	AUUGCAC	ENSMUST00000042857.14|Satb2|ENSMUSG00000038331.16|special AT-rich sequence binding protein 2
mm39_v1_chr1_+_7159134_7159217	0.654514	AUUGCAC	ENSMUST00000061280.17|Pcmtd1|ENSMUSG00000051285.18|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	ENSMUST00000182114.8|Pcmtd1|ENSMUSG00000051285.18|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
mm39_v1_chr5_+_28276353_28276371	0.654102	AUUGCAC	ENSMUST00000059155.11|Insig1|ENSMUSG00000045294.12|insulin induced gene 1
mm39_v1_chr9_-_4796217_4796267	0.650653	AUUGCAC	ENSMUST00000027020.13|Gria4|ENSMUSG00000025892.17|glutamate receptor, ionotropic, AMPA4 (alpha 4)	ENSMUST00000163309.2|Gria4|ENSMUSG00000025892.17|glutamate receptor, ionotropic, AMPA4 (alpha 4)
mm39_v1_chr12_+_29578354_29578468	0.645152	AUUGCAC	ENSMUST00000218583.2|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like	ENSMUST00000049784.17|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like
mm39_v1_chr3_-_107366868_107366868	0.643632	AUUGCAC	ENSMUST00000009617.10|Kcnc4|ENSMUSG00000027895.11|potassium voltage gated channel, Shaw-related subfamily, member 4	ENSMUST00000238670.2|Kcnc4|ENSMUSG00000027895.11|potassium voltage gated channel, Shaw-related subfamily, member 4
mm39_v1_chr12_+_111132779_111132832	0.635396	AUUGCAC	ENSMUST00000117269.8|Traf3|ENSMUSG00000021277.17|TNF receptor-associated factor 3
mm39_v1_chr2_+_81883566_81883655	0.624987	AUUGCAC	ENSMUST00000047527.8|Zfp804a|ENSMUSG00000070866.5|zinc finger protein 804A
mm39_v1_chr3_-_115508680_115508721	0.620527	AUUGCAC	ENSMUST00000055676.4|S1pr1|ENSMUSG00000045092.9|sphingosine-1-phosphate receptor 1
mm39_v1_chr5_+_138740214_138740277	0.620015	AUUGCAC	ENSMUST00000026972.8|Fam20c|ENSMUSG00000025854.16|FAM20C, golgi associated secretory pathway kinase
mm39_v1_chr6_-_137626207_137626298	0.618652	AUUGCAC	ENSMUST00000134630.6|Eps8|ENSMUSG00000015766.15|epidermal growth factor receptor pathway substrate 8	ENSMUST00000058210.13|Eps8|ENSMUSG00000015766.15|epidermal growth factor receptor pathway substrate 8	ENSMUST00000111878.8|Eps8|ENSMUSG00000015766.15|epidermal growth factor receptor pathway substrate 8
mm39_v1_chr9_-_70048766_70048860	0.615151	AUUGCAC	ENSMUST00000034749.16|Fam81a|ENSMUSG00000032224.16|family with sequence similarity 81, member A
mm39_v1_chr14_+_27344385_27344500	0.608609	AUUGCAC	ENSMUST00000210135.2|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2	ENSMUST00000090302.6|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2	ENSMUST00000211087.2|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2
mm39_v1_chr4_-_46566431_46566472	0.607283	AUUGCAC	ENSMUST00000030021.14|Coro2a|ENSMUSG00000028337.15|coronin, actin binding protein 2A	ENSMUST00000107757.8|Coro2a|ENSMUSG00000028337.15|coronin, actin binding protein 2A
mm39_v1_chr3_-_19217174_19217249	0.602942	AUUGCAC	ENSMUST00000029125.10|Armc1|ENSMUSG00000027599.10|armadillo repeat containing 1
mm39_v1_chr4_+_17853452_17853474	0.594758	AUUGCAC	ENSMUST00000029881.10|Mmp16|ENSMUSG00000028226.16|matrix metallopeptidase 16
mm39_v1_chr7_+_130467486_130467542	0.586752	AUUGCAC	ENSMUST00000120441.8|Plekha1|ENSMUSG00000040268.18|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
mm39_v1_chr1_+_133173826_133173844	0.580079	AUUGCAC	ENSMUST00000105082.9|Plekha6|ENSMUSG00000041757.18|pleckstrin homology domain containing, family A member 6	ENSMUST00000038295.15|Plekha6|ENSMUSG00000041757.18|pleckstrin homology domain containing, family A member 6
mm39_v1_chr16_-_67417768_67417810	0.575306	AUUGCAC	ENSMUST00000114292.8|Cadm2|ENSMUSG00000064115.14|cell adhesion molecule 2	ENSMUST00000120898.8|Cadm2|ENSMUSG00000064115.14|cell adhesion molecule 2
mm39_v1_chr8_-_41087793_41087849	0.575099	AUUGCAC	ENSMUST00000173957.2|Mtmr7|ENSMUSG00000039431.17|myotubularin related protein 7	ENSMUST00000048898.17|Mtmr7|ENSMUSG00000039431.17|myotubularin related protein 7	ENSMUST00000174205.8|Mtmr7|ENSMUSG00000039431.17|myotubularin related protein 7
mm39_v1_chr12_-_5425682_5425705	0.570597	AUUGCAC	ENSMUST00000020958.9|Klhl29|ENSMUSG00000020627.11|kelch-like 29
mm39_v1_chr7_+_55699883_55700001	0.566711	AUUGCAC	ENSMUST00000205653.2|Herc2|ENSMUSG00000030451.17|HECT and RLD domain containing E3 ubiquitin protein ligase 2	ENSMUST00000076226.13|Herc2|ENSMUSG00000030451.17|HECT and RLD domain containing E3 ubiquitin protein ligase 2
mm39_v1_chr4_+_116078830_116078872	0.558243	AUUGCAC	ENSMUST00000030464.14|Pik3r3|ENSMUSG00000028698.14|phosphoinositide-3-kinase regulatory subunit 3
mm39_v1_chr13_+_55840888_55840964	0.556461	AUUGCAC	ENSMUST00000057844.10|B230219D22Rik|ENSMUSG00000045767.10|RIKEN cDNA B230219D22 gene
mm39_v1_chr16_-_90807983_90808001	0.556208	AUUGCAC	ENSMUST00000170853.8|Synj1|ENSMUSG00000022973.19|synaptojanin 1	ENSMUST00000130813.3|Synj1|ENSMUSG00000022973.19|synaptojanin 1	ENSMUST00000118390.10|Synj1|ENSMUSG00000022973.19|synaptojanin 1
mm39_v1_chr18_-_72484126_72484140	0.554105	AUUGCAC	ENSMUST00000114943.11|Dcc|ENSMUSG00000060534.17|deleted in colorectal carcinoma
mm39_v1_chr14_+_121272950_121272990	0.552237	AUUGCAC	ENSMUST00000026635.8|Farp1|ENSMUSG00000025555.15|FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
mm39_v1_chr18_-_38345010_38345106	0.550347	AUUGCAC	ENSMUST00000159405.3|Pcdh1|ENSMUSG00000051375.16|protocadherin 1	ENSMUST00000160721.8|Pcdh1|ENSMUSG00000051375.16|protocadherin 1
mm39_v1_chr12_+_73948143_73948166	0.549393	AUUGCAC	ENSMUST00000110461.8|Hif1a|ENSMUSG00000021109.14|hypoxia inducible factor 1, alpha subunit
mm39_v1_chr11_-_100363551_100363585	0.544367	AUUGCAC	ENSMUST00000056665.4|Klhl11|ENSMUSG00000048732.6|kelch-like 11
mm39_v1_chr9_-_42035560_42035631	0.543872	AUUGCAC	ENSMUST00000060989.9|Sorl1|ENSMUSG00000049313.9|sortilin-related receptor, LDLR class A repeats-containing
mm39_v1_chr4_+_149602673_149602735	0.543315	AUUGCAC	ENSMUST00000030839.13|Ctnnbip1|ENSMUSG00000028988.14|catenin beta interacting protein 1
mm39_v1_chr13_-_14697770_14697811	0.541858	AUUGCAC	ENSMUST00000110516.3|Hecw1|ENSMUSG00000021301.10|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
mm39_v1_chr15_-_77191079_77191128	0.540594	AUUGCAC	ENSMUST00000171751.10|Rbfox2|ENSMUSG00000033565.19|RNA binding protein, fox-1 homolog (C. elegans) 2
mm39_v1_chr2_-_65397809_65397839	0.539483	AUUGCAC	ENSMUST00000066432.12|Scn3a|ENSMUSG00000057182.16|sodium channel, voltage-gated, type III, alpha
mm39_v1_chr7_-_105049197_105049261	0.536598	AUUGCAC	ENSMUST00000048079.14|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2	ENSMUST00000118726.8|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2	ENSMUST00000074686.10|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2	ENSMUST00000122327.7|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2	ENSMUST00000179474.9|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2
mm39_v1_chr2_+_83554741_83554763	0.530913	AUUGCAC	ENSMUST00000028499.11|Itgav|ENSMUSG00000027087.12|integrin alpha V
mm39_v1_chr9_-_52590686_52590737	0.530567	AUUGCAC	ENSMUST00000098768.3|AI593442|ENSMUSG00000078307.4|expressed sequence AI593442	ENSMUST00000213843.2|AI593442|ENSMUSG00000078307.4|expressed sequence AI593442
mm39_v1_chr4_-_106321363_106321526	0.528032	AUUGCAC	ENSMUST00000049507.6|Pcsk9|ENSMUSG00000044254.7|proprotein convertase subtilisin/kexin type 9
mm39_v1_chr9_+_45341589_45341677	0.525575	AUUGCAC	ENSMUST00000239471.2|Dscaml1|ENSMUSG00000032087.12|DS cell adhesion molecule like 1	ENSMUST00000034592.11|Dscaml1|ENSMUSG00000032087.12|DS cell adhesion molecule like 1	ENSMUST00000239429.2|Dscaml1|ENSMUSG00000032087.12|DS cell adhesion molecule like 1
mm39_v1_chrX_-_20157966_20158078	0.523378	AUUGCAC	ENSMUST00000115393.3|Slc9a7|ENSMUSG00000037341.15|solute carrier family 9 (sodium/hydrogen exchanger), member 7	ENSMUST00000072451.11|Slc9a7|ENSMUSG00000037341.15|solute carrier family 9 (sodium/hydrogen exchanger), member 7
mm39_v1_chr10_-_5872386_5872405	0.518432	AUUGCAC	ENSMUST00000131996.8|Rgs17|ENSMUSG00000019775.18|regulator of G-protein signaling 17	ENSMUST00000064225.14|Rgs17|ENSMUSG00000019775.18|regulator of G-protein signaling 17
mm39_v1_chr12_+_4183032_4183127	0.517967	AUUGCAC	ENSMUST00000124505.8|Adcy3|ENSMUSG00000020654.16|adenylate cyclase 3
mm39_v1_chr10_+_99099084_99099106	0.513491	AUUGCAC	ENSMUST00000020118.5|Dusp6|ENSMUSG00000019960.9|dual specificity phosphatase 6	ENSMUST00000220291.2|Dusp6|ENSMUSG00000019960.9|dual specificity phosphatase 6
mm39_v1_chrX_-_142716200_142716307	0.508622	AUUGCAC	ENSMUST00000112851.8|Dcx|ENSMUSG00000031285.15|doublecortin	ENSMUST00000112856.3|Dcx|ENSMUSG00000031285.15|doublecortin	ENSMUST00000033642.10|Dcx|ENSMUSG00000031285.15|doublecortin
mm39_v1_chr7_+_110226857_110226873	0.508279	AUUGCAC	ENSMUST00000033054.10|Adm|ENSMUSG00000030790.16|adrenomedullin
mm39_v1_chr1_-_51955126_51955230	0.499627	AUUGCAC	ENSMUST00000046390.14|Myo1b|ENSMUSG00000018417.15|myosin IB
mm39_v1_chr17_+_86475205_86475223	0.496434	AUUGCAC	ENSMUST00000097275.9|Prkce|ENSMUSG00000045038.15|protein kinase C, epsilon
mm39_v1_chr6_+_56691875_56691937	0.495247	AUUGCAC	ENSMUST00000031805.11|Avl9|ENSMUSG00000029787.11|AVL9 cell migration associated	ENSMUST00000177249.3|Avl9|ENSMUSG00000029787.11|AVL9 cell migration associated
mm39_v1_chr7_+_51271742_51271762	0.494362	AUUGCAC	ENSMUST00000032710.7|Slc17a6|ENSMUSG00000030500.7|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
mm39_v1_chr2_-_113047397_113047439	0.481989	AUUGCAC	ENSMUST00000080673.13|Ryr3|ENSMUSG00000057378.16|ryanodine receptor 3	ENSMUST00000208151.2|Ryr3|ENSMUSG00000057378.16|ryanodine receptor 3	ENSMUST00000208290.2|Ryr3|ENSMUSG00000057378.16|ryanodine receptor 3
mm39_v1_chr5_+_13449276_13449350	0.471649	AUUGCAC	ENSMUST00000030714.9|Sema3a|ENSMUSG00000028883.20|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	ENSMUST00000141968.2|Sema3a|ENSMUSG00000028883.20|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm39_v1_chr5_-_108022900_108022973	0.470566	AUUGCAC	ENSMUST00000138111.8|Evi5|ENSMUSG00000011831.17|ecotropic viral integration site 5	ENSMUST00000112642.8|Evi5|ENSMUSG00000011831.17|ecotropic viral integration site 5
mm39_v1_chr4_+_133097013_133097020	0.470097	AUUGCAC	ENSMUST00000030669.8|Slc9a1|ENSMUSG00000028854.10|solute carrier family 9 (sodium/hydrogen exchanger), member 1
mm39_v1_chr6_-_13839914_13839941	0.46876	AUUGCAC	ENSMUST00000060442.14|Gpr85|ENSMUSG00000048216.14|G protein-coupled receptor 85
mm39_v1_chr12_+_49429574_49429666	0.465516	AUUGCAC	ENSMUST00000179669.3|Foxg1|ENSMUSG00000020950.11|forkhead box G1
mm39_v1_chr15_-_101759212_101759229	0.463314	AUUGCAC	ENSMUST00000023790.5|Krt1|ENSMUSG00000046834.8|keratin 1
mm39_v1_chrY_-_1286623_1286635	0.459928	AUUGCAC	ENSMUST00000091190.12|Ddx3y|ENSMUSG00000069045.12|DEAD box helicase 3, Y-linked
mm39_v1_chr7_-_16657825_16658039	0.452947	AUUGCAC	ENSMUST00000019514.10|Calm3|ENSMUSG00000019370.11|calmodulin 3
mm39_v1_chr4_-_119279551_119279618	0.443196	AUUGCAC	ENSMUST00000106316.2|Ppcs|ENSMUSG00000028636.15|phosphopantothenoylcysteine synthetase	ENSMUST00000030385.13|Ppcs|ENSMUSG00000028636.15|phosphopantothenoylcysteine synthetase
mm39_v1_chrX_+_92698469_92698587	0.440458	AUUGCAC	ENSMUST00000113933.9|Pcyt1b|ENSMUSG00000035246.17|phosphate cytidylyltransferase 1, choline, beta isoform
mm39_v1_chrX_-_17438520_17438564	0.438623	AUUGCAC	ENSMUST00000026016.13|Fundc1|ENSMUSG00000025040.14|FUN14 domain containing 1
mm39_v1_chr1_+_134637031_134637056	0.438221	AUUGCAC	ENSMUST00000121990.2|Syt2|ENSMUSG00000026452.16|synaptotagmin II
mm39_v1_chr15_+_81686622_81686779	0.437023	AUUGCAC	ENSMUST00000109553.10|Tef|ENSMUSG00000022389.16|thyrotroph embryonic factor
mm39_v1_chr12_+_102915102_102915133	0.433269	AUUGCAC	ENSMUST00000101099.12|Unc79|ENSMUSG00000021198.17|unc-79 homolog
mm39_v1_chrX_-_104973003_104973014	0.43197	AUUGCAC	ENSMUST00000130980.2|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler	ENSMUST00000113573.8|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler
mm39_v1_chr8_-_17585263_17585335	0.421171	AUUGCAC	ENSMUST00000082104.7|Csmd1|ENSMUSG00000060924.16|CUB and Sushi multiple domains 1
mm39_v1_chr3_+_33853941_33853981	0.41506	AUUGCAC	ENSMUST00000099153.10|Ttc14|ENSMUSG00000027677.18|tetratricopeptide repeat domain 14
mm39_v1_chr1_-_25267894_25267916	0.411357	AUUGCAC	ENSMUST00000126626.8|Adgrb3|ENSMUSG00000033569.18|adhesion G protein-coupled receptor B3
mm39_v1_chr17_-_25652750_25652764	0.404852	AUUGCAC	ENSMUST00000159610.8|Cacna1h|ENSMUSG00000024112.17|calcium channel, voltage-dependent, T type, alpha 1H subunit	ENSMUST00000159048.8|Cacna1h|ENSMUSG00000024112.17|calcium channel, voltage-dependent, T type, alpha 1H subunit	ENSMUST00000078496.12|Cacna1h|ENSMUSG00000024112.17|calcium channel, voltage-dependent, T type, alpha 1H subunit
mm39_v1_chr6_+_137229427_137229472	0.399642	AUUGCAC	ENSMUST00000077115.13|Ptpro|ENSMUSG00000030223.15|protein tyrosine phosphatase, receptor type, O
mm39_v1_chr9_+_58536386_58536393	0.398168	AUUGCAC	ENSMUST00000176250.2|Nptn|ENSMUSG00000032336.18|neuroplastin
mm39_v1_chr12_+_110855664_110855746	0.397405	AUUGCAC	ENSMUST00000165978.3|Tecpr2|ENSMUSG00000021275.17|tectonin beta-propeller repeat containing 2	ENSMUST00000169597.9|Tecpr2|ENSMUSG00000021275.17|tectonin beta-propeller repeat containing 2
mm39_v1_chr5_+_57876401_57876457	0.391208	AUUGCAC	ENSMUST00000094783.7|Pcdh7|ENSMUSG00000029108.15|protocadherin 7
mm39_v1_chr5_+_76988444_76988484	0.387303	AUUGCAC	ENSMUST00000120639.9|Cracd|ENSMUSG00000036377.20|capping protein inhibiting regulator of actin	ENSMUST00000163347.8|Cracd|ENSMUSG00000036377.20|capping protein inhibiting regulator of actin	ENSMUST00000121851.2|Cracd|ENSMUSG00000036377.20|capping protein inhibiting regulator of actin
mm39_v1_chr13_-_58261406_58261469	0.386375	AUUGCAC	ENSMUST00000160860.9|Klhl3|ENSMUSG00000014164.16|kelch-like 3
mm39_v1_chr14_-_26693189_26693189	0.380706	AUUGCAC	ENSMUST00000036570.5|Appl1|ENSMUSG00000040760.12|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
mm39_v1_chr6_+_34686373_34686381	0.370944	AUUGCAC	ENSMUST00000115021.8|Cald1|ENSMUSG00000029761.17|caldesmon 1
mm39_v1_chr1_-_143652711_143652806	0.365282	AUUGCAC	ENSMUST00000159879.2|Ro60|ENSMUSG00000018199.10|Ro60, Y RNA binding protein
mm39_v1_chrX_-_13712746_13712826	0.358951	AUUGCAC	ENSMUST00000115436.9|Cask|ENSMUSG00000031012.18|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	ENSMUST00000033321.11|Cask|ENSMUSG00000031012.18|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	ENSMUST00000115438.10|Cask|ENSMUSG00000031012.18|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm39_v1_chr9_-_56151334_56151382	0.35525	AUUGCAC	ENSMUST00000188142.7|Peak1|ENSMUSG00000074305.10|pseudopodium-enriched atypical kinase 1
mm39_v1_chr8_+_91555449_91555470	0.353641	AUUGCAC	ENSMUST00000109614.9|Chd9|ENSMUSG00000056608.15|chromodomain helicase DNA binding protein 9
mm39_v1_chr18_-_6241470_6241550	0.35287	AUUGCAC	ENSMUST00000163210.2|Kif5b|ENSMUSG00000006740.15|kinesin family member 5B	ENSMUST00000025083.14|Kif5b|ENSMUSG00000006740.15|kinesin family member 5B
mm39_v1_chr6_-_24664959_24665039	0.347092	AUUGCAC	ENSMUST00000041737.8|Wasl|ENSMUSG00000029684.15|WASP like actin nucleation promoting factor	ENSMUST00000031695.15|Wasl|ENSMUSG00000029684.15|WASP like actin nucleation promoting factor
mm39_v1_chr10_+_122514669_122514703	0.338694	AUUGCAC	ENSMUST00000161487.8|Ppm1h|ENSMUSG00000034613.13|protein phosphatase 1H (PP2C domain containing)	ENSMUST00000067918.12|Ppm1h|ENSMUSG00000034613.13|protein phosphatase 1H (PP2C domain containing)
mm39_v1_chr4_+_48045143_48045160	0.336575	AUUGCAC	ENSMUST00000030025.10|Nr4a3|ENSMUSG00000028341.10|nuclear receptor subfamily 4, group A, member 3
mm39_v1_chr16_-_45830575_45830587	0.334679	AUUGCAC	ENSMUST00000130481.2|Plcxd2|ENSMUSG00000087141.2|phosphatidylinositol-specific phospholipase C, X domain containing 2
mm39_v1_chr3_-_132655954_132656052	0.334387	AUUGCAC	ENSMUST00000042744.16|Npnt|ENSMUSG00000040998.19|nephronectin	ENSMUST00000117811.8|Npnt|ENSMUSG00000040998.19|nephronectin
mm39_v1_chr11_-_118181044_118181070	0.334176	AUUGCAC	ENSMUST00000106296.9|Usp36|ENSMUSG00000033909.18|ubiquitin specific peptidase 36	ENSMUST00000092382.10|Usp36|ENSMUSG00000033909.18|ubiquitin specific peptidase 36
mm39_v1_chr7_-_19297001_19297001	0.33013	AUUGCAC	ENSMUST00000058444.10|Ppp1r37|ENSMUSG00000051403.10|protein phosphatase 1, regulatory subunit 37
mm39_v1_chr1_+_131755715_131755757	0.329469	AUUGCAC	ENSMUST00000086559.7|Slc41a1|ENSMUSG00000013275.10|solute carrier family 41, member 1
mm39_v1_chr5_+_117552042_117552076	0.329194	AUUGCAC	ENSMUST00000180430.2|Ksr2|ENSMUSG00000061578.9|kinase suppressor of ras 2
mm39_v1_chr7_-_68398989_68398998	0.328543	AUUGCAC	ENSMUST00000048068.15|Arrdc4|ENSMUSG00000042659.16|arrestin domain containing 4
mm39_v1_chr18_+_58011691_58011750	0.327687	AUUGCAC	ENSMUST00000115366.3|Slc12a2|ENSMUSG00000024597.12|solute carrier family 12, member 2
mm39_v1_chr15_+_32920869_32920972	0.327219	AUUGCAC	ENSMUST00000022871.7|Sdc2|ENSMUSG00000022261.7|syndecan 2
mm39_v1_chr10_+_107998219_107998269	0.323215	AUUGCAC	ENSMUST00000070663.6|Ppp1r12a|ENSMUSG00000019907.11|protein phosphatase 1, regulatory subunit 12A
mm39_v1_chr9_+_74860335_74860374	0.315749	AUUGCAC	ENSMUST00000170846.8|Fam214a|ENSMUSG00000034858.17|family with sequence similarity 214, member A
mm39_v1_chr17_+_83522700_83522721	0.315439	AUUGCAC	ENSMUST00000170794.8|Pkdcc|ENSMUSG00000024247.15|protein kinase domain containing, cytoplasmic
mm39_v1_chr3_-_107603778_107603890	0.315313	AUUGCAC	ENSMUST00000029490.15|Ahcyl1|ENSMUSG00000027893.15|S-adenosylhomocysteine hydrolase-like 1
mm39_v1_chr8_+_10027707_10027725	0.315143	AUUGCAC	ENSMUST00000139793.8|Abhd13|ENSMUSG00000040396.13|abhydrolase domain containing 13	ENSMUST00000048216.6|Abhd13|ENSMUSG00000040396.13|abhydrolase domain containing 13
mm39_v1_chr10_+_21870565_21870591	0.30679	AUUGCAC	ENSMUST00000020145.12|Sgk1|ENSMUSG00000019970.16|serum/glucocorticoid regulated kinase 1
mm39_v1_chr2_-_172782089_172782141	0.304375	AUUGCAC	ENSMUST00000009143.8|Bmp7|ENSMUSG00000008999.8|bone morphogenetic protein 7
mm39_v1_chr11_+_77654072_77654166	0.303584	AUUGCAC	ENSMUST00000108375.9|Myo18a|ENSMUSG00000000631.21|myosin XVIIIA
mm39_v1_chr1_+_187730018_187730031	0.301086	AUUGCAC	ENSMUST00000027906.13|Esrrg|ENSMUSG00000026610.14|estrogen-related receptor gamma
mm39_v1_chr19_+_3901797_3901840	0.300612	AUUGCAC	ENSMUST00000072055.13|Chka|ENSMUSG00000024843.16|choline kinase alpha
mm39_v1_chr12_-_32111214_32111302	0.297514	AUUGCAC	ENSMUST00000003079.12|Prkar2b|ENSMUSG00000002997.16|protein kinase, cAMP dependent regulatory, type II beta	ENSMUST00000036497.16|Prkar2b|ENSMUSG00000002997.16|protein kinase, cAMP dependent regulatory, type II beta
mm39_v1_chr17_-_24863956_24863969	0.294027	AUUGCAC	ENSMUST00000019684.13|Slc9a3r2|ENSMUSG00000002504.16|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
mm39_v1_chr5_+_53966956_53967025	0.292017	AUUGCAC	ENSMUST00000037337.10|Tbc1d19|ENSMUSG00000039178.10|TBC1 domain family, member 19
mm39_v1_chr1_-_58625431_58625482	0.289389	AUUGCAC	ENSMUST00000161000.2|Fam126b|ENSMUSG00000038174.15|family with sequence similarity 126, member B	ENSMUST00000161600.8|Fam126b|ENSMUSG00000038174.15|family with sequence similarity 126, member B
mm39_v1_chr11_+_31822211_31822263	0.289304	AUUGCAC	ENSMUST00000020543.13|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4	ENSMUST00000109412.9|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4
mm39_v1_chr18_+_56565188_56565236	0.287525	AUUGCAC	ENSMUST00000070166.6|Gramd3|ENSMUSG00000001700.11|GRAM domain containing 3
mm39_v1_chr4_+_5644090_5644129	0.282514	AUUGCAC	ENSMUST00000054857.13|Fam110b|ENSMUSG00000049119.15|family with sequence similarity 110, member B
mm39_v1_chr11_-_116303791_116303830	0.281693	AUUGCAC	ENSMUST00000100202.10|Rnf157|ENSMUSG00000052949.15|ring finger protein 157	ENSMUST00000106398.9|Rnf157|ENSMUSG00000052949.15|ring finger protein 157
mm39_v1_chr12_+_24881582_24881657	0.279745	AUUGCAC	ENSMUST00000221952.2|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2	ENSMUST00000078902.8|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2	ENSMUST00000110942.11|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2
mm39_v1_chr5_-_102217770_102217807	0.275261	AUUGCAC	ENSMUST00000053177.14|Wdfy3|ENSMUSG00000043940.16|WD repeat and FYVE domain containing 3	ENSMUST00000174698.2|Wdfy3|ENSMUSG00000043940.16|WD repeat and FYVE domain containing 3
mm39_v1_chr14_-_47805861_47805896	0.273778	AUUGCAC	ENSMUST00000228784.2|Atg14|ENSMUSG00000037526.8|autophagy related 14	ENSMUST00000042988.7|Atg14|ENSMUSG00000037526.8|autophagy related 14
mm39_v1_chr5_+_43390513_43390580	0.269227	AUUGCAC	ENSMUST00000166713.9|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2	ENSMUST00000169035.8|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2	ENSMUST00000114065.9|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2
mm39_v1_chrX_-_151151680_151151737	0.269127	AUUGCAC	ENSMUST00000070316.12|Gpr173|ENSMUSG00000056679.14|G-protein coupled receptor 173
mm39_v1_chr7_-_110443557_110443664	0.267613	AUUGCAC	ENSMUST00000177462.8|Rnf141|ENSMUSG00000030788.17|ring finger protein 141	ENSMUST00000176716.3|Rnf141|ENSMUSG00000030788.17|ring finger protein 141	ENSMUST00000176746.8|Rnf141|ENSMUSG00000030788.17|ring finger protein 141	ENSMUST00000177236.8|Rnf141|ENSMUSG00000030788.17|ring finger protein 141
mm39_v1_chr4_+_136197066_136197161	0.26711	AUUGCAC	ENSMUST00000170102.8|Luzp1|ENSMUSG00000001089.15|leucine zipper protein 1	ENSMUST00000105849.9|Luzp1|ENSMUSG00000001089.15|leucine zipper protein 1	ENSMUST00000129230.3|Luzp1|ENSMUSG00000001089.15|leucine zipper protein 1
mm39_v1_chr15_-_38976034_38976111	0.265484	AUUGCAC	ENSMUST00000227323.2|Slc25a32|ENSMUSG00000022299.10|solute carrier family 25, member 32	ENSMUST00000022908.10|Slc25a32|ENSMUSG00000022299.10|solute carrier family 25, member 32
mm39_v1_chr18_+_77981636_77981692	0.263116	AUUGCAC	ENSMUST00000044622.7|Epg5|ENSMUSG00000039840.9|ectopic P-granules autophagy protein 5 homolog (C. elegans)
mm39_v1_chr8_+_27575611_27575626	0.262561	AUUGCAC	ENSMUST00000178514.8|Adgra2|ENSMUSG00000031486.16|adhesion G protein-coupled receptor A2	ENSMUST00000033876.14|Adgra2|ENSMUSG00000031486.16|adhesion G protein-coupled receptor A2
mm39_v1_chrX_+_105070907_105070929	0.25932	AUUGCAC	ENSMUST00000055941.7|Atp7a|ENSMUSG00000033792.13|ATPase, Cu++ transporting, alpha polypeptide
mm39_v1_chr2_-_3333586_3333690	0.258831	AUUGCAC	ENSMUST00000062672.7|Rpp38|ENSMUSG00000049950.7|ribonuclease P/MRP 38 subunit
mm39_v1_chr12_-_107969853_107969872	0.256514	AUUGCAC	ENSMUST00000066060.11|Bcl11b|ENSMUSG00000048251.16|B cell leukemia/lymphoma 11B
mm39_v1_chr14_-_103584179_103584277	0.248724	AUUGCAC	ENSMUST00000159855.8|Mycbp2|ENSMUSG00000033004.17|MYC binding protein 2, E3 ubiquitin protein ligase
mm39_v1_chr4_+_130519788_130519983	0.244844	AUUGCAC	ENSMUST00000070478.4|Sdc3|ENSMUSG00000025743.15|syndecan 3
mm39_v1_chr5_-_92231314_92231416	0.240594	AUUGCAC	ENSMUST00000169094.8|G3bp2|ENSMUSG00000029405.17|GTPase activating protein (SH3 domain) binding protein 2	ENSMUST00000167918.8|G3bp2|ENSMUSG00000029405.17|GTPase activating protein (SH3 domain) binding protein 2
mm39_v1_chr2_-_45003270_45003296	0.236497	AUUGCAC	ENSMUST00000202935.4|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000068415.11|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000127520.8|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2
mm39_v1_chr9_-_96993169_96993214	0.235722	AUUGCAC	ENSMUST00000085206.11|Slc25a36|ENSMUSG00000032449.14|solute carrier family 25, member 36
mm39_v1_chr7_-_25516041_25516078	0.235638	AUUGCAC	ENSMUST00000043314.10|Cyp2s1|ENSMUSG00000040703.12|cytochrome P450, family 2, subfamily s, polypeptide 1
mm39_v1_chr2_-_125701059_125701141	0.23098	AUUGCAC	ENSMUST00000110463.8|Cops2|ENSMUSG00000027206.14|COP9 signalosome subunit 2	ENSMUST00000028635.6|Cops2|ENSMUSG00000027206.14|COP9 signalosome subunit 2
mm39_v1_chr9_-_40257586_40257634	0.228816	AUUGCAC	ENSMUST00000121357.8|Gramd1b|ENSMUSG00000040111.18|GRAM domain containing 1B
mm39_v1_chr3_-_133250129_133250174	0.228576	AUUGCAC	ENSMUST00000196398.5|Tet2|ENSMUSG00000040943.13|tet methylcytosine dioxygenase 2	ENSMUST00000098603.8|Tet2|ENSMUSG00000040943.13|tet methylcytosine dioxygenase 2
mm39_v1_chr5_-_69749617_69749683	0.228382	AUUGCAC	ENSMUST00000173927.8|Gnpda2|ENSMUSG00000029209.16|glucosamine-6-phosphate deaminase 2	ENSMUST00000120789.8|Gnpda2|ENSMUSG00000029209.16|glucosamine-6-phosphate deaminase 2	ENSMUST00000031117.13|Gnpda2|ENSMUSG00000029209.16|glucosamine-6-phosphate deaminase 2
mm39_v1_chr18_-_64794338_64794338	0.227222	AUUGCAC	ENSMUST00000025482.10|Atp8b1|ENSMUSG00000039529.10|ATPase, class I, type 8B, member 1
mm39_v1_chr6_-_126621751_126621768	0.226498	AUUGCAC	ENSMUST00000055168.5|Kcna1|ENSMUSG00000047976.5|potassium voltage-gated channel, shaker-related subfamily, member 1
mm39_v1_chr11_-_78588194_78588205	0.224331	AUUGCAC	ENSMUST00000142739.8|Nlk|ENSMUSG00000017376.16|nemo like kinase
mm39_v1_chr16_-_45664664_45664744	0.221516	AUUGCAC	ENSMUST00000036355.13|Phldb2|ENSMUSG00000033149.18|pleckstrin homology like domain, family B, member 2
mm39_v1_chr16_-_4867703_4867756	0.217458	AUUGCAC	ENSMUST00000115844.3|Glyr1|ENSMUSG00000022536.15|glyoxylate reductase 1 homolog (Arabidopsis)	ENSMUST00000023189.15|Glyr1|ENSMUSG00000022536.15|glyoxylate reductase 1 homolog (Arabidopsis)
mm39_v1_chr8_+_36054919_36054981	0.215278	AUUGCAC	ENSMUST00000037666.6|Mfhas1|ENSMUSG00000070056.7|malignant fibrous histiocytoma amplified sequence 1
mm39_v1_chr1_-_170695328_170695354	0.211383	AUUGCAC	ENSMUST00000027974.7|Atf6|ENSMUSG00000026663.7|activating transcription factor 6
mm39_v1_chr6_+_88701394_88701412	0.206829	AUUGCAC	ENSMUST00000113585.9|Mgll|ENSMUSG00000033174.18|monoglyceride lipase
mm39_v1_chr3_-_86828140_86828284	0.202609	AUUGCAC	ENSMUST00000029719.14|Dclk2|ENSMUSG00000028078.15|doublecortin-like kinase 2
mm39_v1_chr16_+_10884156_10884247	0.201222	AUUGCAC	ENSMUST00000089011.6|Snn|ENSMUSG00000037972.8|stannin
mm39_v1_chr2_-_63014622_63014681	0.201218	AUUGCAC	ENSMUST00000075052.10|Kcnh7|ENSMUSG00000059742.11|potassium voltage-gated channel, subfamily H (eag-related), member 7	ENSMUST00000112454.8|Kcnh7|ENSMUSG00000059742.11|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm39_v1_chr10_-_127047396_127047502	0.200646	AUUGCAC	ENSMUST00000013970.9|Pip4k2c|ENSMUSG00000025417.9|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
mm39_v1_chr1_+_33758937_33759080	0.198107	AUUGCAC	ENSMUST00000088287.10|Rab23|ENSMUSG00000004768.15|RAB23, member RAS oncogene family
mm39_v1_chr9_+_43655230_43655318	0.19353	AUUGCAC	ENSMUST00000034510.9|Nectin1|ENSMUSG00000032012.10|nectin cell adhesion molecule 1
mm39_v1_chr2_+_71617266_71617322	0.189948	AUUGCAC	ENSMUST00000112101.8|Itga6|ENSMUSG00000027111.17|integrin alpha 6	ENSMUST00000028522.10|Itga6|ENSMUSG00000027111.17|integrin alpha 6
mm39_v1_chr6_+_113054314_113054343	0.189846	AUUGCAC	ENSMUST00000042889.12|Setd5|ENSMUSG00000034269.13|SET domain containing 5
mm39_v1_chr1_-_16689660_16689713	0.189201	AUUGCAC	ENSMUST00000117146.9|Ube2w|ENSMUSG00000025939.20|ubiquitin-conjugating enzyme E2W (putative)
mm39_v1_chr6_+_116314975_116315044	0.188101	AUUGCAC	ENSMUST00000079012.13|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000101032.10|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000123405.8|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000204657.3|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000203116.2|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000203193.3|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000126376.8|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8
mm39_v1_chr10_+_7556948_7556990	0.186246	AUUGCAC	ENSMUST00000165952.9|Lats1|ENSMUSG00000040021.14|large tumor suppressor
mm39_v1_chr2_-_68302612_68302660	0.185323	AUUGCAC	ENSMUST00000102715.4|Stk39|ENSMUSG00000027030.16|serine/threonine kinase 39
mm39_v1_chr9_+_70586232_70586292	0.18532	AUUGCAC	ENSMUST00000067880.13|Adam10|ENSMUSG00000054693.15|a disintegrin and metallopeptidase domain 10
mm39_v1_chr8_+_111760521_111760565	0.178396	AUUGCAC	ENSMUST00000034441.8|Aars|ENSMUSG00000031960.15|alanyl-tRNA synthetase
mm39_v1_chr2_-_38955452_38955513	0.175731	AUUGCAC	ENSMUST00000112850.9|Golga1|ENSMUSG00000026754.17|golgi autoantigen, golgin subfamily a, 1
mm39_v1_chr9_-_62029877_62029900	0.174413	AUUGCAC	ENSMUST00000185675.7|Glce|ENSMUSG00000032252.15|glucuronyl C5-epimerase
mm39_v1_chr1_+_131935342_131935373	0.17305	AUUGCAC	ENSMUST00000086556.12|Elk4|ENSMUSG00000026436.16|ELK4, member of ETS oncogene family
mm39_v1_chr11_-_51748450_51748511	0.172561	AUUGCAC	ENSMUST00000020655.14|Jade2|ENSMUSG00000020387.16|jade family PHD finger 2	ENSMUST00000109090.8|Jade2|ENSMUSG00000020387.16|jade family PHD finger 2
mm39_v1_chr2_+_165834546_165834563	0.170782	AUUGCAC	ENSMUST00000109252.8|Ncoa3|ENSMUSG00000027678.18|nuclear receptor coactivator 3	ENSMUST00000088095.6|Ncoa3|ENSMUSG00000027678.18|nuclear receptor coactivator 3
mm39_v1_chr8_-_11058458_11058458	0.169818	AUUGCAC	ENSMUST00000040514.8|Irs2|ENSMUSG00000038894.8|insulin receptor substrate 2
mm39_v1_chr2_+_28531239_28531274	0.169439	AUUGCAC	ENSMUST00000028155.12|Tsc1|ENSMUSG00000026812.17|TSC complex subunit 1	ENSMUST00000113869.8|Tsc1|ENSMUSG00000026812.17|TSC complex subunit 1	ENSMUST00000113867.9|Tsc1|ENSMUSG00000026812.17|TSC complex subunit 1
mm39_v1_chr11_+_120123727_120123779	0.168901	AUUGCAC	ENSMUST00000122148.8|Bahcc1|ENSMUSG00000039741.16|BAH domain and coiled-coil containing 1	ENSMUST00000044985.14|Bahcc1|ENSMUSG00000039741.16|BAH domain and coiled-coil containing 1
mm39_v1_chr11_-_76108316_76108490	0.168594	AUUGCAC	ENSMUST00000102500.5|Gemin4|ENSMUSG00000049396.7|gem nuclear organelle associated protein 4
mm39_v1_chr12_+_74011255_74011316	0.167009	AUUGCAC	ENSMUST00000021532.6|Snapc1|ENSMUSG00000021113.6|small nuclear RNA activating complex, polypeptide 1
mm39_v1_chr18_+_10325148_10325222	0.162466	AUUGCAC	ENSMUST00000048977.16|Greb1l|ENSMUSG00000042942.19|growth regulation by estrogen in breast cancer-like
mm39_v1_chr3_+_88049633_88049790	0.157948	AUUGCAC	ENSMUST00000001455.13|Mef2d|ENSMUSG00000001419.18|myocyte enhancer factor 2D	ENSMUST00000119251.8|Mef2d|ENSMUSG00000001419.18|myocyte enhancer factor 2D
mm39_v1_chr14_+_49303952_49304045	0.157306	AUUGCAC	ENSMUST00000037473.6|Ap5m1|ENSMUSG00000036291.7|adaptor-related protein complex 5, mu 1 subunit	ENSMUST00000228238.2|Ap5m1|ENSMUSG00000036291.7|adaptor-related protein complex 5, mu 1 subunit
mm39_v1_chrX_-_9529189_9529242	0.155837	AUUGCAC	ENSMUST00000033519.3|Dynlt3|ENSMUSG00000031176.9|dynein light chain Tctex-type 3
mm39_v1_chr18_+_69478790_69478882	0.153234	AUUGCAC	ENSMUST00000202116.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000114982.8|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000078486.13|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000202772.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000201288.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4
mm39_v1_chr17_+_28361115_28361167	0.153209	AUUGCAC	ENSMUST00000043503.11|Scube3|ENSMUSG00000038677.15|signal peptide, CUB domain, EGF-like 3
mm39_v1_chr4_+_106768662_106768708	0.152771	AUUGCAC	ENSMUST00000030367.15|Ssbp3|ENSMUSG00000061887.15|single-stranded DNA binding protein 3	ENSMUST00000149926.8|Ssbp3|ENSMUSG00000061887.15|single-stranded DNA binding protein 3
mm39_v1_chr5_-_23988696_23988709	0.15188	AUUGCAC	ENSMUST00000119946.8|Pus7|ENSMUSG00000057541.15|pseudouridylate synthase 7
mm39_v1_chr9_+_13739003_13739075	0.151548	AUUGCAC	ENSMUST00000059579.12|Fam76b|ENSMUSG00000037808.14|family with sequence similarity 76, member B
mm39_v1_chr3_+_122039206_122039227	0.149448	AUUGCAC	ENSMUST00000029769.14|Gclm|ENSMUSG00000028124.16|glutamate-cysteine ligase, modifier subunit
mm39_v1_chr15_-_28025920_28025970	0.148433	AUUGCAC	ENSMUST00000090247.7|Trio|ENSMUSG00000022263.11|triple functional domain (PTPRF interacting)
mm39_v1_chr14_+_118374511_118374590	0.148427	AUUGCAC	ENSMUST00000022728.4|Gpr180|ENSMUSG00000022131.4|G protein-coupled receptor 180
mm39_v1_chr19_+_38825005_38825056	0.148377	AUUGCAC	ENSMUST00000037302.6|Tbc1d12|ENSMUSG00000048720.9|TBC1D12: TBC1 domain family, member 12
mm39_v1_chr1_+_74275648_74275681	0.146783	AUUGCAC	ENSMUST00000113820.9|Arpc2|ENSMUSG00000006304.15|actin related protein 2/3 complex, subunit 2	ENSMUST00000006467.14|Arpc2|ENSMUSG00000006304.15|actin related protein 2/3 complex, subunit 2
mm39_v1_chr3_+_108191398_108191458	0.146032	AUUGCAC	ENSMUST00000135636.6|Sort1|ENSMUSG00000068747.15|sortilin 1	ENSMUST00000102632.7|Sort1|ENSMUSG00000068747.15|sortilin 1
mm39_v1_chr15_+_81284333_81284417	0.143692	AUUGCAC	ENSMUST00000163754.9|Xpnpep3|ENSMUSG00000022401.13|X-prolyl aminopeptidase 3, mitochondrial	ENSMUST00000041609.11|Xpnpep3|ENSMUSG00000022401.13|X-prolyl aminopeptidase 3, mitochondrial
mm39_v1_chr5_-_120726721_120726743	0.143188	AUUGCAC	ENSMUST00000046426.10|Tpcn1|ENSMUSG00000032741.10|two pore channel 1
mm39_v1_chr1_+_65225834_65225881	0.137975	AUUGCAC	ENSMUST00000081154.14|Pikfyve|ENSMUSG00000025949.17|phosphoinositide kinase, FYVE type zinc finger containing
mm39_v1_chr3_+_157653051_157653148	0.136815	AUUGCAC	ENSMUST00000164582.4|Ankrd13c|ENSMUSG00000039988.15|ankyrin repeat domain 13c	ENSMUST00000040787.13|Ankrd13c|ENSMUSG00000039988.15|ankyrin repeat domain 13c
mm39_v1_chr2_-_173118315_173118336	0.135256	AUUGCAC	ENSMUST00000036248.13|Pmepa1|ENSMUSG00000038400.16|prostate transmembrane protein, androgen induced 1
mm39_v1_chr7_+_34611804_34611854	0.13507	AUUGCAC	ENSMUST00000075068.14|Pepd|ENSMUSG00000063931.15|peptidase D
mm39_v1_chr6_+_63232955_63233024	0.13496	AUUGCAC	ENSMUST00000095852.5|Grid2|ENSMUSG00000071424.11|glutamate receptor, ionotropic, delta 2
mm39_v1_chr18_-_61533434_61533520	0.131158	AUUGCAC	ENSMUST00000063307.6|Ppargc1b|ENSMUSG00000033871.15|peroxisome proliferative activated receptor, gamma, coactivator 1 beta	ENSMUST00000075299.13|Ppargc1b|ENSMUSG00000033871.15|peroxisome proliferative activated receptor, gamma, coactivator 1 beta
mm39_v1_chr11_-_65679101_65679147	0.129253	AUUGCAC	ENSMUST00000152096.8|Map2k4|ENSMUSG00000033352.12|mitogen-activated protein kinase kinase 4	ENSMUST00000046963.10|Map2k4|ENSMUSG00000033352.12|mitogen-activated protein kinase kinase 4
mm39_v1_chr12_-_4527138_4527196	0.127241	AUUGCAC	ENSMUST00000085814.5|Ncoa1|ENSMUSG00000020647.11|nuclear receptor coactivator 1
mm39_v1_chr15_-_81284244_81284294	0.1242	AUUGCAC	ENSMUST00000172107.8|St13|ENSMUSG00000022403.16|suppression of tumorigenicity 13	ENSMUST00000169204.2|St13|ENSMUSG00000022403.16|suppression of tumorigenicity 13	ENSMUST00000163382.2|St13|ENSMUSG00000022403.16|suppression of tumorigenicity 13
mm39_v1_chrX_+_119199956_119200030	0.122816	AUUGCAC	ENSMUST00000113364.10|Pcdh11x|ENSMUSG00000034755.19|protocadherin 11 X-linked	ENSMUST00000050239.16|Pcdh11x|ENSMUSG00000034755.19|protocadherin 11 X-linked	ENSMUST00000113358.10|Pcdh11x|ENSMUSG00000034755.19|protocadherin 11 X-linked
mm39_v1_chr3_+_31204069_31204106	0.12096	AUUGCAC	ENSMUST00000046174.8|Cldn11|ENSMUSG00000037625.8|claudin 11
mm39_v1_chr6_-_124834670_124834718	0.120768	AUUGCAC	ENSMUST00000023958.10|P3h3|ENSMUSG00000023191.10|prolyl 3-hydroxylase 3
mm39_v1_chr8_+_88845375_88845405	0.118076	AUUGCAC	ENSMUST00000095214.10|Cnep1r1|ENSMUSG00000036810.17|CTD nuclear envelope phosphatase 1 regulatory subunit 1
mm39_v1_chr14_-_75185281_75185324	0.113593	AUUGCAC	ENSMUST00000088970.7|Lrch1|ENSMUSG00000068015.9|leucine-rich repeats and calponin homology (CH) domain containing 1	ENSMUST00000228252.2|Lrch1|ENSMUSG00000068015.9|leucine-rich repeats and calponin homology (CH) domain containing 1
mm39_v1_chr4_+_129355374_129355629	0.113431	AUUGCAC	ENSMUST00000048162.10|Bsdc1|ENSMUSG00000040859.15|BSD domain containing 1	ENSMUST00000138013.3|Bsdc1|ENSMUSG00000040859.15|BSD domain containing 1
mm39_v1_chr19_-_59932079_59932110	0.112945	AUUGCAC	ENSMUST00000171986.8|Rab11fip2|ENSMUSG00000040022.15|RAB11 family interacting protein 2 (class I)
mm39_v1_chr19_+_56710570_56710631	0.110706	AUUGCAC	ENSMUST00000038949.6|Adrb1|ENSMUSG00000035283.6|adrenergic receptor, beta 1
mm39_v1_chr2_-_48839276_48839288	0.109947	AUUGCAC	ENSMUST00000028098.11|Orc4|ENSMUSG00000026761.13|origin recognition complex, subunit 4
mm39_v1_chr13_-_95511837_95511877	0.108767	AUUGCAC	ENSMUST00000022189.9|Aggf1|ENSMUSG00000021681.9|angiogenic factor with G patch and FHA domains 1
mm39_v1_chr9_-_24685572_24685599	0.108488	AUUGCAC	ENSMUST00000052946.12|Tbx20|ENSMUSG00000031965.16|T-box 20	ENSMUST00000166018.4|Tbx20|ENSMUSG00000031965.16|T-box 20
mm39_v1_chr4_-_45408646_45408768	0.105646	AUUGCAC	ENSMUST00000153904.2|Slc25a51|ENSMUSG00000045973.19|solute carrier family 25, member 51	ENSMUST00000132815.3|Slc25a51|ENSMUSG00000045973.19|solute carrier family 25, member 51	ENSMUST00000107796.8|Slc25a51|ENSMUSG00000045973.19|solute carrier family 25, member 51	ENSMUST00000116341.4|Slc25a51|ENSMUSG00000045973.19|solute carrier family 25, member 51
mm39_v1_chr5_+_150183201_150183232	0.101552	AUUGCAC	ENSMUST00000087204.9|Fry|ENSMUSG00000056602.14|FRY microtubule binding protein
mm39_v1_chr19_+_3817396_3817523	0.101112	AUUGCAC	ENSMUST00000052699.13|Kmt5b|ENSMUSG00000045098.20|lysine methyltransferase 5B	ENSMUST00000113974.11|Kmt5b|ENSMUSG00000045098.20|lysine methyltransferase 5B	ENSMUST00000113972.9|Kmt5b|ENSMUSG00000045098.20|lysine methyltransferase 5B	ENSMUST00000113973.8|Kmt5b|ENSMUSG00000045098.20|lysine methyltransferase 5B	ENSMUST00000113977.9|Kmt5b|ENSMUSG00000045098.20|lysine methyltransferase 5B	ENSMUST00000113968.9|Kmt5b|ENSMUSG00000045098.20|lysine methyltransferase 5B
mm39_v1_chr11_+_75478890_75478968	0.100002	AUUGCAC	ENSMUST00000143219.8|Pitpna|ENSMUSG00000017781.18|phosphatidylinositol transfer protein, alpha	ENSMUST00000179521.8|Pitpna|ENSMUSG00000017781.18|phosphatidylinositol transfer protein, alpha	ENSMUST00000179445.8|Pitpna|ENSMUSG00000017781.18|phosphatidylinositol transfer protein, alpha
mm39_v1_chr4_+_21727695_21727726	0.0982419	AUUGCAC	ENSMUST00000065928.11|Ccnc|ENSMUSG00000028252.21|cyclin C	ENSMUST00000102997.8|Ccnc|ENSMUSG00000028252.21|cyclin C	ENSMUST00000120679.8|Ccnc|ENSMUSG00000028252.21|cyclin C
mm39_v1_chr4_-_120682859_120682904	0.0976412	AUUGCAC	ENSMUST00000134979.8|Nfyc|ENSMUSG00000032897.18|nuclear transcription factor-Y gamma	ENSMUST00000136236.8|Nfyc|ENSMUSG00000032897.18|nuclear transcription factor-Y gamma	ENSMUST00000043429.12|Nfyc|ENSMUSG00000032897.18|nuclear transcription factor-Y gamma	ENSMUST00000145658.2|Nfyc|ENSMUSG00000032897.18|nuclear transcription factor-Y gamma
mm39_v1_chr8_+_35274440_35274464	0.0969798	AUUGCAC	ENSMUST00000033930.5|Dusp4|ENSMUSG00000031530.7|dual specificity phosphatase 4
mm39_v1_chr12_+_40495951_40496015	0.0969625	AUUGCAC	ENSMUST00000037488.8|Dock4|ENSMUSG00000035954.11|dedicator of cytokinesis 4
mm39_v1_chr19_+_45991907_45991987	0.0955471	AUUGCAC	ENSMUST00000099393.4|Hps6|ENSMUSG00000074811.4|HPS6, biogenesis of lysosomal organelles complex 2 subunit 3
mm39_v1_chr2_+_33106062_33106096	0.0932104	AUUGCAC	ENSMUST00000004208.7|Angptl2|ENSMUSG00000004105.9|angiopoietin-like 2
mm39_v1_chr17_+_79244553_79244612	0.0913687	AUUGCAC	ENSMUST00000024887.6|Ndufaf7|ENSMUSG00000024082.6|NADH:ubiquinone oxidoreductase complex assembly factor 7	ENSMUST00000233068.2|Ndufaf7|ENSMUSG00000024082.6|NADH:ubiquinone oxidoreductase complex assembly factor 7	ENSMUST00000233777.2|Ndufaf7|ENSMUSG00000024082.6|NADH:ubiquinone oxidoreductase complex assembly factor 7
mm39_v1_chr5_-_3852857_3852925	0.0909707	AUUGCAC	ENSMUST00000043551.11|Ankib1|ENSMUSG00000040351.12|ankyrin repeat and IBR domain containing 1
mm39_v1_chr15_+_78993111_78993186	0.089881	AUUGCAC	ENSMUST00000040320.10|Micall1|ENSMUSG00000033039.11|microtubule associated monooxygenase, calponin and LIM domain containing -like 1
mm39_v1_chr13_+_13764982_13765058	0.089475	AUUGCAC	ENSMUST00000110559.3|Lyst|ENSMUSG00000019726.13|lysosomal trafficking regulator
mm39_v1_chr4_+_48124902_48124938	0.0885993	AUUGCAC	ENSMUST00000107721.8|Stx17|ENSMUSG00000061455.14|syntaxin 17	ENSMUST00000153502.8|Stx17|ENSMUSG00000061455.14|syntaxin 17	ENSMUST00000107720.9|Stx17|ENSMUSG00000061455.14|syntaxin 17	ENSMUST00000064765.6|Stx17|ENSMUSG00000061455.14|syntaxin 17
mm39_v1_chr13_+_55782814_55782864	0.0885987	AUUGCAC	ENSMUST00000172272.8|Ddx46|ENSMUSG00000021500.18|DEAD box helicase 46	ENSMUST00000099479.4|Ddx46|ENSMUSG00000021500.18|DEAD box helicase 46	ENSMUST00000223736.2|Ddx46|ENSMUSG00000021500.18|DEAD box helicase 46
mm39_v1_chr7_-_45367382_45367426	0.087636	AUUGCAC	ENSMUST00000107737.11|Sphk2|ENSMUSG00000057342.16|sphingosine kinase 2
mm39_v1_chr5_-_151113619_151113734	0.0853102	AUUGCAC	ENSMUST00000062015.15|Stard13|ENSMUSG00000016128.15|StAR-related lipid transfer (START) domain containing 13	ENSMUST00000110483.9|Stard13|ENSMUSG00000016128.15|StAR-related lipid transfer (START) domain containing 13
mm39_v1_chr2_-_130681978_130682070	0.0836813	AUUGCAC	ENSMUST00000044766.15|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000138990.2|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000120316.8|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000110243.8|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene
mm39_v1_chr1_+_38037086_38037096	0.0785663	AUUGCAC	ENSMUST00000027252.8|Eif5b|ENSMUSG00000026083.13|eukaryotic translation initiation factor 5B
mm39_v1_chr2_-_120234539_120234584	0.0778901	AUUGCAC	ENSMUST00000090042.12|Tmem87a|ENSMUSG00000033808.17|transmembrane protein 87A	ENSMUST00000110729.2|Tmem87a|ENSMUSG00000033808.17|transmembrane protein 87A	ENSMUST00000090046.12|Tmem87a|ENSMUSG00000033808.17|transmembrane protein 87A
mm39_v1_chr10_-_128047658_128047693	0.0777085	AUUGCAC	ENSMUST00000061995.10|Spryd4|ENSMUSG00000051346.10|SPRY domain containing 4
mm39_v1_chr1_+_179788037_179788150	0.073882	AUUGCAC	ENSMUST00000097453.9|Cdc42bpa|ENSMUSG00000026490.19|CDC42 binding protein kinase alpha	ENSMUST00000111117.8|Cdc42bpa|ENSMUSG00000026490.19|CDC42 binding protein kinase alpha
mm39_v1_chr4_+_21848039_21848077	0.0724537	AUUGCAC	ENSMUST00000098238.9|Pnisr|ENSMUSG00000028248.16|PNN interacting serine/arginine-rich	ENSMUST00000108229.2|Pnisr|ENSMUSG00000028248.16|PNN interacting serine/arginine-rich
mm39_v1_chr10_+_115220826_115220927	0.0701481	AUUGCAC	ENSMUST00000036044.9|Zfc3h1|ENSMUSG00000034163.11|zinc finger, C3H1-type containing
mm39_v1_chr13_-_104057016_104057075	0.0694864	AUUGCAC	ENSMUST00000022222.12|Erbin|ENSMUSG00000021709.15|Erbb2 interacting protein
mm39_v1_chr11_-_102446947_102447025	0.0688283	AUUGCAC	ENSMUST00000143842.2|Gpatch8|ENSMUSG00000034621.15|G patch domain containing 8
mm39_v1_chr4_-_141412910_141412910	0.0618352	AUUGCAC	ENSMUST00000105782.2|Rsc1a1|ENSMUSG00000040715.13|regulatory solute carrier protein, family 1, member 1
mm39_v1_chr15_-_79287747_79287778	0.061512	AUUGCAC	ENSMUST00000074991.10|Tmem184b|ENSMUSG00000009035.16|transmembrane protein 184b
mm39_v1_chr12_+_35097179_35097230	0.0610347	AUUGCAC	ENSMUST00000163677.3|Snx13|ENSMUSG00000020590.17|sorting nexin 13	ENSMUST00000048519.17|Snx13|ENSMUSG00000020590.17|sorting nexin 13
mm39_v1_chr5_+_108609087_108609107	0.0597179	AUUGCAC	ENSMUST00000112597.8|Pcgf3|ENSMUSG00000033623.14|polycomb group ring finger 3	ENSMUST00000046975.12|Pcgf3|ENSMUSG00000033623.14|polycomb group ring finger 3
mm39_v1_chr5_-_23821523_23821596	0.0586112	AUUGCAC	ENSMUST00000088392.9|Srpk2|ENSMUSG00000062604.12|serine/arginine-rich protein specific kinase 2
mm39_v1_chr4_+_85972125_85972250	0.0585935	AUUGCAC	ENSMUST00000107178.9|Adamtsl1|ENSMUSG00000066113.17|ADAMTS-like 1	ENSMUST00000048885.12|Adamtsl1|ENSMUSG00000066113.17|ADAMTS-like 1	ENSMUST00000141889.8|Adamtsl1|ENSMUSG00000066113.17|ADAMTS-like 1	ENSMUST00000120678.2|Adamtsl1|ENSMUSG00000066113.17|ADAMTS-like 1
mm39_v1_chr1_+_138891447_138891539	0.0568588	AUUGCAC	ENSMUST00000168527.8|Dennd1b|ENSMUSG00000056268.16|DENN/MADD domain containing 1B
mm39_v1_chr5_+_105847811_105847907	0.0548315	AUUGCAC	ENSMUST00000060531.16|Lrrc8d|ENSMUSG00000046079.17|leucine rich repeat containing 8D
mm39_v1_chr1_-_30912662_30912738	0.0548044	AUUGCAC	ENSMUST00000186733.7|Phf3|ENSMUSG00000048874.16|PHD finger protein 3
mm39_v1_chr11_+_109540201_109540264	0.0536755	AUUGCAC	ENSMUST00000106677.8|Prkar1a|ENSMUSG00000020612.17|protein kinase, cAMP dependent regulatory, type I, alpha
mm39_v1_chr9_+_64939695_64939748	0.0495938	AUUGCAC	ENSMUST00000034960.14|Dpp8|ENSMUSG00000032393.16|dipeptidylpeptidase 8
mm39_v1_chr9_+_78020554_78020659	0.0451803	AUUGCAC	ENSMUST00000009972.6|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1	ENSMUST00000117330.8|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1	ENSMUST00000044551.8|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1
mm39_v1_chr14_+_69792873_69792897	0.0444068	AUUGCAC	ENSMUST00000185072.8|Entpd4b|ENSMUSG00000022066.17|ectonucleoside triphosphate diphosphohydrolase 4B	ENSMUST00000064846.8|Entpd4b|ENSMUSG00000022066.17|ectonucleoside triphosphate diphosphohydrolase 4B
mm39_v1_chr15_+_102927366_102927405	0.0437135	AUUGCAC	ENSMUST00000165375.3|Hoxc4|ENSMUSG00000075394.5|homeobox C4
mm39_v1_chr5_+_110324506_110324567	0.0421434	AUUGCAC	ENSMUST00000112512.8|Golga3|ENSMUSG00000029502.15|golgi autoantigen, golgin subfamily a, 3
mm39_v1_chr10_-_43050516_43050565	0.0411957	AUUGCAC	ENSMUST00000040275.9|Sobp|ENSMUSG00000038248.9|sine oculis binding protein
mm39_v1_chr2_+_90575714_90575813	0.0377625	AUUGCAC	ENSMUST00000238890.2|Fnbp4|ENSMUSG00000008200.16|formin binding protein 4	ENSMUST00000013759.6|Fnbp4|ENSMUSG00000008200.16|formin binding protein 4
mm39_v1_chr12_-_59266511_59266563	0.0345775	AUUGCAC	ENSMUST00000043204.8|Fbxo33|ENSMUSG00000035329.8|F-box protein 33
mm39_v1_chr4_-_126323291_126323349	0.0330397	AUUGCAC	ENSMUST00000069097.13|Ago3|ENSMUSG00000028842.16|argonaute RISC catalytic subunit 3
mm39_v1_chr8_+_91796680_91796751	0.0325932	AUUGCAC	ENSMUST00000034091.8|Rbl2|ENSMUSG00000031666.16|RB transcriptional corepressor like 2	ENSMUST00000211136.2|Rbl2|ENSMUSG00000031666.16|RB transcriptional corepressor like 2
mm39_v1_chr7_+_63094489_63094510	0.0297114	AUUGCAC	ENSMUST00000058476.14|Otud7a|ENSMUSG00000033510.15|OTU domain containing 7A
mm39_v1_chr10_+_59715378_59715434	0.025925	AUUGCAC	ENSMUST00000147914.8|Dnajb12|ENSMUSG00000020109.14|DnaJ heat shock protein family (Hsp40) member B12	ENSMUST00000146590.8|Dnajb12|ENSMUSG00000020109.14|DnaJ heat shock protein family (Hsp40) member B12
mm39_v1_chr12_+_111780604_111780678	0.0254287	AUUGCAC	ENSMUST00000021714.9|Zfyve21|ENSMUSG00000021286.9|zinc finger, FYVE domain containing 21	ENSMUST00000223211.2|Zfyve21|ENSMUSG00000021286.9|zinc finger, FYVE domain containing 21	ENSMUST00000222843.2|Zfyve21|ENSMUSG00000021286.9|zinc finger, FYVE domain containing 21	ENSMUST00000221375.2|Zfyve21|ENSMUSG00000021286.9|zinc finger, FYVE domain containing 21
mm39_v1_chr13_-_93636224_93636333	0.0249566	AUUGCAC	ENSMUST00000220513.2|Jmy|ENSMUSG00000021690.11|junction-mediating and regulatory protein	ENSMUST00000065537.9|Jmy|ENSMUSG00000021690.11|junction-mediating and regulatory protein
mm39_v1_chr15_-_53209513_53209565	0.0239791	AUUGCAC	ENSMUST00000077273.9|Ext1|ENSMUSG00000061731.10|exostosin glycosyltransferase 1
mm39_v1_chr8_-_23747023_23747047	0.021959	AUUGCAC	ENSMUST00000121783.7|Golga7|ENSMUSG00000015341.18|golgi autoantigen, golgin subfamily a, 7
mm39_v1_chr8_+_79755194_79755242	0.0218754	AUUGCAC	ENSMUST00000119254.8|Zfp827|ENSMUSG00000071064.16|zinc finger protein 827	ENSMUST00000238669.2|Zfp827|ENSMUSG00000071064.16|zinc finger protein 827
mm39_v1_chr14_-_69969959_69970031	0.021859	AUUGCAC	ENSMUST00000036381.10|Chmp7|ENSMUSG00000034190.10|charged multivesicular body protein 7
mm39_v1_chr1_-_161616031_161616079	0.0205952	AUUGCAC	ENSMUST00000000834.4|Fasl|ENSMUSG00000000817.11|Fas ligand (TNF superfamily, member 6)
mm39_v1_chr13_+_42205491_42205548	0.0190914	AUUGCAC	ENSMUST00000060148.6|Hivep1|ENSMUSG00000021366.9|human immunodeficiency virus type I enhancer binding protein 1
mm39_v1_chr15_-_96597610_96597617	0.0163442	AUUGCAC	ENSMUST00000023099.8|Slc38a2|ENSMUSG00000022462.8|solute carrier family 38, member 2
mm39_v1_chr1_-_97589675_97589799	0.0161375	AUUGCAC	ENSMUST00000053033.14|Macir|ENSMUSG00000044768.17|macrophage immunometabolism regulator	ENSMUST00000149927.2|Macir|ENSMUSG00000044768.17|macrophage immunometabolism regulator
mm39_v1_chr18_-_12369351_12369463	0.014666	AUUGCAC	ENSMUST00000025279.6|Npc1|ENSMUSG00000024413.15|NPC intracellular cholesterol transporter 1
mm39_v1_chr7_+_125871761_125871791	0.0139252	AUUGCAC	ENSMUST00000056028.11|Sbk1|ENSMUSG00000042978.12|SH3-binding kinase 1
mm39_v1_chr4_-_141450710_141450747	0.00326308	AUUGCAC	ENSMUST00000102484.5|Ddi2|ENSMUSG00000078515.5|DNA-damage inducible protein 2	ENSMUST00000177592.2|Ddi2|ENSMUSG00000078515.5|DNA-damage inducible protein 2
mm39_v1_chr9_+_65536892_65536965	0.00161944	AUUGCAC	ENSMUST00000169003.8|Rbpms2|ENSMUSG00000032387.16|RNA binding protein with multiple splicing 2
