mm39_v1_chr2_+_136555364_136555412	6.91558	CACAGUG	ENSMUST00000028727.11|Snap25|ENSMUSG00000027273.14|synaptosomal-associated protein 25	ENSMUST00000110098.4|Snap25|ENSMUSG00000027273.14|synaptosomal-associated protein 25
mm39_v1_chr6_+_114259596_114259777	4.21933	CACAGUG	ENSMUST00000032454.8|Slc6a1|ENSMUSG00000030310.11|solute carrier family 6 (neurotransmitter transporter, GABA), member 1
mm39_v1_chr10_-_108846816_108846844	4.02473	CACAGUG	ENSMUST00000105276.8|Syt1|ENSMUSG00000035864.15|synaptotagmin I	ENSMUST00000064054.14|Syt1|ENSMUSG00000035864.15|synaptotagmin I
mm39_v1_chr5_-_124939428_124939488	3.92462	CACAGUG	ENSMUST00000036206.14|Ccdc92|ENSMUSG00000037979.14|coiled-coil domain containing 92
mm39_v1_chr5_+_101912939_101913014	3.71391	CACAGUG	ENSMUST00000031273.9|Cds1|ENSMUSG00000029330.9|CDP-diacylglycerol synthase 1
mm39_v1_chr13_+_89687915_89687915	3.57502	CACAGUG	ENSMUST00000022108.9|Hapln1|ENSMUSG00000021613.10|hyaluronan and proteoglycan link protein 1
mm39_v1_chr11_-_53371050_53371101	3.46313	CACAGUG	ENSMUST00000104955.4|Sowaha|ENSMUSG00000044352.7|sosondowah ankyrin repeat domain family member A
mm39_v1_chr7_+_64151435_64151454	3.39346	CACAGUG	ENSMUST00000032732.15|Apba2|ENSMUSG00000030519.15|amyloid beta (A4) precursor protein-binding, family A, member 2
mm39_v1_chr2_+_102488985_102489014	3.21948	CACAGUG	ENSMUST00000080210.10|Slc1a2|ENSMUSG00000005089.16|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm39_v1_chr4_-_91260265_91260306	2.99448	CACAGUG	ENSMUST00000107110.8|Elavl2|ENSMUSG00000008489.19|ELAV like RNA binding protein 1	ENSMUST00000008633.15|Elavl2|ENSMUSG00000008489.19|ELAV like RNA binding protein 1	ENSMUST00000107118.8|Elavl2|ENSMUSG00000008489.19|ELAV like RNA binding protein 1
mm39_v1_chr3_-_125732255_125732268	2.9755	CACAGUG	ENSMUST00000057944.12|Ugt8a|ENSMUSG00000032854.13|UDP galactosyltransferase 8A
mm39_v1_chrX_+_149981074_149981136	2.95092	CACAGUG	ENSMUST00000184730.8|Wnk3|ENSMUSG00000041245.14|WNK lysine deficient protein kinase 3	ENSMUST00000184392.8|Wnk3|ENSMUSG00000041245.14|WNK lysine deficient protein kinase 3	ENSMUST00000096285.5|Wnk3|ENSMUSG00000041245.14|WNK lysine deficient protein kinase 3
mm39_v1_chr14_+_76192449_76192456	2.93665	CACAGUG	ENSMUST00000050120.4|Kctd4|ENSMUSG00000046523.6|potassium channel tetramerisation domain containing 4
mm39_v1_chr8_-_70573465_70573523	2.93641	CACAGUG	ENSMUST00000002412.9|Ncan|ENSMUSG00000002341.9|neurocan
mm39_v1_chr18_-_23174698_23174729	2.93022	CACAGUG	ENSMUST00000097651.10|Nol4|ENSMUSG00000041923.16|nucleolar protein 4
mm39_v1_chr3_-_72965136_72965136	2.92735	CACAGUG	ENSMUST00000059407.9|Slitrk3|ENSMUSG00000048304.9|SLIT and NTRK-like family, member 3
mm39_v1_chr3_+_96088467_96088483	2.91555	CACAGUG	ENSMUST00000035371.9|Sv2a|ENSMUSG00000038486.10|synaptic vesicle glycoprotein 2 a
mm39_v1_chr14_-_124914516_124914539	2.67664	CACAGUG	ENSMUST00000095529.10|Fgf14|ENSMUSG00000025551.14|fibroblast growth factor 14
mm39_v1_chr8_+_85141975_85142030	2.67056	CACAGUG	ENSMUST00000121390.8|Cacna1a|ENSMUSG00000034656.19|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	ENSMUST00000122053.2|Cacna1a|ENSMUSG00000034656.19|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
mm39_v1_chr9_+_32027335_32027432	2.63329	CACAGUG	ENSMUST00000174641.8|Arhgap32|ENSMUSG00000041444.15|Rho GTPase activating protein 32
mm39_v1_chr15_-_71599664_71599697	2.62608	CACAGUG	ENSMUST00000022953.10|Fam135b|ENSMUSG00000036800.9|family with sequence similarity 135, member B
mm39_v1_chr11_+_56902624_56902653	2.60001	CACAGUG	ENSMUST00000036315.16|Gria1|ENSMUSG00000020524.17|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm39_v1_chr14_-_29443792_29443842	2.5933	CACAGUG	ENSMUST00000022567.9|Cacna2d3|ENSMUSG00000021991.10|calcium channel, voltage-dependent, alpha2/delta subunit 3
mm39_v1_chr17_-_45860580_45860603	2.58699	CACAGUG	ENSMUST00000180252.3|Tmem151b|ENSMUSG00000096847.3|transmembrane protein 151B
mm39_v1_chr2_-_162502994_162503067	2.57145	CACAGUG	ENSMUST00000109442.8|Ptprt|ENSMUSG00000053141.17|protein tyrosine phosphatase, receptor type, T	ENSMUST00000109445.9|Ptprt|ENSMUSG00000053141.17|protein tyrosine phosphatase, receptor type, T	ENSMUST00000109443.8|Ptprt|ENSMUSG00000053141.17|protein tyrosine phosphatase, receptor type, T	ENSMUST00000109441.2|Ptprt|ENSMUSG00000053141.17|protein tyrosine phosphatase, receptor type, T
mm39_v1_chr3_-_50398027_50398063	2.52085	CACAGUG	ENSMUST00000029297.6|Slc7a11|ENSMUSG00000027737.11|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	ENSMUST00000194462.6|Slc7a11|ENSMUSG00000027737.11|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
mm39_v1_chr16_-_4815645_4815716	2.44833	CACAGUG	ENSMUST00000229321.2|Septin12|ENSMUSG00000022542.8|septin 12	ENSMUST00000230362.2|Septin12|ENSMUSG00000022542.8|septin 12	ENSMUST00000170323.3|Septin12|ENSMUSG00000022542.8|septin 12
mm39_v1_chr15_-_78602971_78602971	2.43142	CACAGUG	ENSMUST00000088592.6|Elfn2|ENSMUSG00000043460.8|leucine rich repeat and fibronectin type III, extracellular 2
mm39_v1_chr15_-_78004211_78004232	2.38093	CACAGUG	ENSMUST00000019290.3|Cacng2|ENSMUSG00000019146.3|calcium channel, voltage-dependent, gamma subunit 2
mm39_v1_chrX_+_92330102_92330128	2.35667	CACAGUG	ENSMUST00000046565.13|Arx|ENSMUSG00000035277.16|aristaless related homeobox	ENSMUST00000113947.6|Arx|ENSMUSG00000035277.16|aristaless related homeobox
mm39_v1_chr2_-_130480014_130480033	2.35185	CACAGUG	ENSMUST00000089561.10|Lzts3|ENSMUSG00000037703.15|leucine zipper, putative tumor suppressor family member 3	ENSMUST00000110260.8|Lzts3|ENSMUSG00000037703.15|leucine zipper, putative tumor suppressor family member 3
mm39_v1_chr4_-_122854966_122854986	2.34412	CACAGUG	ENSMUST00000030408.12|Mfsd2a|ENSMUSG00000028655.12|major facilitator superfamily domain containing 2A	ENSMUST00000127047.2|Mfsd2a|ENSMUSG00000028655.12|major facilitator superfamily domain containing 2A
mm39_v1_chrX_-_142716200_142716307	2.30574	CACAGUG	ENSMUST00000112851.8|Dcx|ENSMUSG00000031285.15|doublecortin	ENSMUST00000112856.3|Dcx|ENSMUSG00000031285.15|doublecortin	ENSMUST00000033642.10|Dcx|ENSMUSG00000031285.15|doublecortin
mm39_v1_chr11_+_92990110_92990156	2.26448	CACAGUG	ENSMUST00000107863.4|Car10|ENSMUSG00000056158.15|carbonic anhydrase 10
mm39_v1_chr15_+_54434576_54434596	2.23898	CACAGUG	ENSMUST00000025356.4|Mal2|ENSMUSG00000024479.4|mal, T cell differentiation protein 2
mm39_v1_chr10_-_80861239_80861246	2.20974	CACAGUG	ENSMUST00000055125.5|Diras1|ENSMUSG00000043670.5|DIRAS family, GTP-binding RAS-like 1
mm39_v1_chr10_-_53627201_53627219	2.20583	CACAGUG	ENSMUST00000020003.15|Fam184a|ENSMUSG00000019856.15|family with sequence similarity 184, member A
mm39_v1_chr12_+_79075924_79076002	2.16909	CACAGUG	ENSMUST00000039928.7|Plekhh1|ENSMUSG00000060716.8|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
mm39_v1_chr7_-_97387145_97387191	2.16273	CACAGUG	ENSMUST00000084986.8|Aqp11|ENSMUSG00000042797.10|aquaporin 11
mm39_v1_chr14_-_65499835_65499941	2.13554	CACAGUG	ENSMUST00000131309.3|Fzd3|ENSMUSG00000007989.8|frizzled class receptor 3
mm39_v1_chr10_-_30531768_30531807	2.10698	CACAGUG	ENSMUST00000092610.12|Ncoa7|ENSMUSG00000039697.17|nuclear receptor coactivator 7
mm39_v1_chr14_-_109151590_109151615	2.08025	CACAGUG	ENSMUST00000100322.4|Slitrk1|ENSMUSG00000075478.4|SLIT and NTRK-like family, member 1
mm39_v1_chr9_-_73876182_73876281	2.07574	CACAGUG	ENSMUST00000184666.8|Unc13c|ENSMUSG00000062151.14|unc-13 homolog C
mm39_v1_chrX_+_135171002_135171018	2.0749	CACAGUG	ENSMUST00000178632.8|Bex3|ENSMUSG00000046432.13|brain expressed X-linked 3	ENSMUST00000053540.11|Bex3|ENSMUSG00000046432.13|brain expressed X-linked 3
mm39_v1_chr2_+_92430043_92430069	2.01186	CACAGUG	ENSMUST00000065797.7|Chst1|ENSMUSG00000027221.6|carbohydrate sulfotransferase 1
mm39_v1_chrX_+_40490005_40490181	1.98603	CACAGUG	ENSMUST00000115103.9|Gria3|ENSMUSG00000001986.17|glutamate receptor, ionotropic, AMPA3 (alpha 3)	ENSMUST00000076349.12|Gria3|ENSMUSG00000001986.17|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm39_v1_chr17_+_9020522_9020559	1.986	CACAGUG	ENSMUST00000089085.10|Pde10a|ENSMUSG00000023868.18|phosphodiesterase 10A
mm39_v1_chr6_-_24956296_24956296	1.98103	CACAGUG	ENSMUST00000127247.4|Tmem229a|ENSMUSG00000048022.12|transmembrane protein 229A
mm39_v1_chr7_+_99876515_99876606	1.97181	CACAGUG	ENSMUST00000084935.11|Pgm2l1|ENSMUSG00000030729.18|phosphoglucomutase 2-like 1
mm39_v1_chr7_-_29204812_29204898	1.95684	CACAGUG	ENSMUST00000183096.8|Sipa1l3|ENSMUSG00000030583.17|signal-induced proliferation-associated 1 like 3	ENSMUST00000085809.11|Sipa1l3|ENSMUSG00000030583.17|signal-induced proliferation-associated 1 like 3
mm39_v1_chr7_+_108610032_108610042	1.95306	CACAGUG	ENSMUST00000033341.12|Tub|ENSMUSG00000031028.15|tubby bipartite transcription factor
mm39_v1_chr12_-_98541293_98541386	1.90546	CACAGUG	ENSMUST00000110113.3|Kcnk10|ENSMUSG00000033854.11|potassium channel, subfamily K, member 10
mm39_v1_chr2_-_65955338_65955486	1.90372	CACAGUG	ENSMUST00000028378.4|Galnt3|ENSMUSG00000026994.10|polypeptide N-acetylgalactosaminyltransferase 3
mm39_v1_chr12_+_24881582_24881657	1.89859	CACAGUG	ENSMUST00000221952.2|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2	ENSMUST00000078902.8|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2	ENSMUST00000110942.11|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2
mm39_v1_chr13_-_52685305_52685321	1.8775	CACAGUG	ENSMUST00000057442.8|Diras2|ENSMUSG00000047842.8|DIRAS family, GTP-binding RAS-like 2
mm39_v1_chrX_-_164110372_164110416	1.85145	CACAGUG	ENSMUST00000058787.9|Glra2|ENSMUSG00000018589.9|glycine receptor, alpha 2 subunit
mm39_v1_chr4_+_155819257_155819331	1.82744	CACAGUG	ENSMUST00000147721.8|Tmem240|ENSMUSG00000084845.10|transmembrane protein 240	ENSMUST00000127188.3|Tmem240|ENSMUSG00000084845.10|transmembrane protein 240
mm39_v1_chr9_-_4796217_4796267	1.8014	CACAGUG	ENSMUST00000027020.13|Gria4|ENSMUSG00000025892.17|glutamate receptor, ionotropic, AMPA4 (alpha 4)	ENSMUST00000163309.2|Gria4|ENSMUSG00000025892.17|glutamate receptor, ionotropic, AMPA4 (alpha 4)
mm39_v1_chr8_+_127025265_127025343	1.79223	CACAGUG	ENSMUST00000108759.3|Slc35f3|ENSMUSG00000057060.9|solute carrier family 35, member F3
mm39_v1_chr7_-_43139390_43139499	1.78367	CACAGUG	ENSMUST00000107974.3|Iglon5|ENSMUSG00000013367.6|IgLON family member 5
mm39_v1_chrX_+_94942639_94942639	1.76137	CACAGUG	ENSMUST00000082183.8|Zc3h12b|ENSMUSG00000035045.18|zinc finger CCCH-type containing 12B
mm39_v1_chr9_-_42035560_42035631	1.75399	CACAGUG	ENSMUST00000060989.9|Sorl1|ENSMUSG00000049313.9|sortilin-related receptor, LDLR class A repeats-containing
mm39_v1_chr2_-_68302612_68302660	1.74493	CACAGUG	ENSMUST00000102715.4|Stk39|ENSMUSG00000027030.16|serine/threonine kinase 39
mm39_v1_chr3_+_129326004_129326089	1.74009	CACAGUG	ENSMUST00000199910.5|Elovl6|ENSMUSG00000041220.11|ELOVL family member 6, elongation of long chain fatty acids (yeast)	ENSMUST00000197070.5|Elovl6|ENSMUSG00000041220.11|ELOVL family member 6, elongation of long chain fatty acids (yeast)	ENSMUST00000071402.7|Elovl6|ENSMUSG00000041220.11|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm39_v1_chr7_-_45516553_45516553	1.73506	CACAGUG	ENSMUST00000002848.10|Grin2d|ENSMUSG00000002771.13|glutamate receptor, ionotropic, NMDA2D (epsilon 4)
mm39_v1_chr11_-_115918784_115918826	1.72994	CACAGUG	ENSMUST00000106454.8|H3f3b|ENSMUSG00000016559.15|H3.3 histone B
mm39_v1_chr9_-_112016834_112016930	1.70411	CACAGUG	ENSMUST00000111872.9|Arpp21|ENSMUSG00000032503.19|cyclic AMP-regulated phosphoprotein, 21	ENSMUST00000164754.9|Arpp21|ENSMUSG00000032503.19|cyclic AMP-regulated phosphoprotein, 21
mm39_v1_chr4_-_124755964_124756093	1.70332	CACAGUG	ENSMUST00000064444.8|Maneal|ENSMUSG00000042763.10|mannosidase, endo-alpha-like
mm39_v1_chr3_+_117368876_117368889	1.68998	CACAGUG	ENSMUST00000106473.5|Plppr5|ENSMUSG00000033342.16|phospholipid phosphatase related 5
mm39_v1_chr5_-_124233812_124233884	1.68621	CACAGUG	ENSMUST00000031354.11|Abcb9|ENSMUSG00000029408.14|ATP-binding cassette, sub-family B (MDR/TAP), member 9
mm39_v1_chr10_+_52566616_52566651	1.68597	CACAGUG	ENSMUST00000105473.3|Slc35f1|ENSMUSG00000038602.8|solute carrier family 35, member F1
mm39_v1_chr11_+_102284229_102284322	1.67587	CACAGUG	ENSMUST00000107105.9|Rundc3a|ENSMUSG00000006575.15|RUN domain containing 3A	ENSMUST00000107102.8|Rundc3a|ENSMUSG00000006575.15|RUN domain containing 3A	ENSMUST00000107103.8|Rundc3a|ENSMUSG00000006575.15|RUN domain containing 3A	ENSMUST00000006750.8|Rundc3a|ENSMUSG00000006575.15|RUN domain containing 3A
mm39_v1_chr1_+_66507523_66507606	1.66708	CACAGUG	ENSMUST00000061620.17|Unc80|ENSMUSG00000055567.19|unc-80, NALCN activator	ENSMUST00000212557.3|Unc80|ENSMUSG00000055567.19|unc-80, NALCN activator
mm39_v1_chr15_+_81820954_81821038	1.66048	CACAGUG	ENSMUST00000038757.8|Csdc2|ENSMUSG00000042109.9|cold shock domain containing C2, RNA binding	ENSMUST00000230633.2|Csdc2|ENSMUSG00000042109.9|cold shock domain containing C2, RNA binding
mm39_v1_chr4_+_125384481_125384495	1.65878	CACAGUG	ENSMUST00000030676.8|Grik3|ENSMUSG00000001985.10|glutamate receptor, ionotropic, kainate 3
mm39_v1_chr18_+_23548455_23548511	1.62432	CACAGUG	ENSMUST00000115832.4|Dtna|ENSMUSG00000024302.17|dystrobrevin alpha
mm39_v1_chr4_+_49059255_49059331	1.61805	CACAGUG	ENSMUST00000076670.3|Plppr1|ENSMUSG00000063446.5|phospholipid phosphatase related 1
mm39_v1_chr18_+_86413077_86413094	1.60403	CACAGUG	ENSMUST00000058829.4|Neto1|ENSMUSG00000050321.4|neuropilin (NRP) and tolloid (TLL)-like 1
mm39_v1_chr4_+_48585135_48585187	1.59194	CACAGUG	ENSMUST00000030032.13|Tmeff1|ENSMUSG00000028347.15|transmembrane protein with EGF-like and two follistatin-like domains 1
mm39_v1_chr1_+_134637031_134637056	1.58152	CACAGUG	ENSMUST00000121990.2|Syt2|ENSMUSG00000026452.16|synaptotagmin II
mm39_v1_chr1_+_153528689_153528771	1.54391	CACAGUG	ENSMUST00000041776.12|Rgs8|ENSMUSG00000042671.13|regulator of G-protein signaling 8
mm39_v1_chr2_+_49509288_49509355	1.54286	CACAGUG	ENSMUST00000028102.14|Kif5c|ENSMUSG00000026764.16|kinesin family member 5C
mm39_v1_chr19_+_59446804_59446883	1.52748	CACAGUG	ENSMUST00000062216.4|Emx2|ENSMUSG00000043969.5|empty spiracles homeobox 2
mm39_v1_chr9_-_52590686_52590737	1.51928	CACAGUG	ENSMUST00000098768.3|AI593442|ENSMUSG00000078307.4|expressed sequence AI593442	ENSMUST00000213843.2|AI593442|ENSMUSG00000078307.4|expressed sequence AI593442
mm39_v1_chr11_-_101979297_101979359	1.49951	CACAGUG	ENSMUST00000017458.11|Mpp2|ENSMUSG00000017314.13|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
mm39_v1_chr4_+_33924632_33924651	1.48549	CACAGUG	ENSMUST00000057188.7|Cnr1|ENSMUSG00000044288.7|cannabinoid receptor 1 (brain)
mm39_v1_chr12_+_4819277_4819337	1.47471	CACAGUG	ENSMUST00000020967.11|Pfn4|ENSMUSG00000020639.15|profilin family, member 4
mm39_v1_chr16_-_45830575_45830587	1.4635	CACAGUG	ENSMUST00000130481.2|Plcxd2|ENSMUSG00000087141.2|phosphatidylinositol-specific phospholipase C, X domain containing 2
mm39_v1_chr11_-_87249837_87249901	1.44773	CACAGUG	ENSMUST00000055438.5|Ppm1e|ENSMUSG00000046442.5|protein phosphatase 1E (PP2C domain containing)
mm39_v1_chr5_+_114706077_114706077	1.44722	CACAGUG	ENSMUST00000043650.8|Fam222a|ENSMUSG00000041930.8|family with sequence similarity 222, member A
mm39_v1_chr10_+_107107477_107107557	1.44213	CACAGUG	ENSMUST00000020057.16|Lin7a|ENSMUSG00000019906.16|lin-7 homolog A (C. elegans)
mm39_v1_chr7_-_83735702_83735717	1.44118	CACAGUG	ENSMUST00000064174.12|Cemip|ENSMUSG00000052353.14|cell migration inducing protein, hyaluronan binding
mm39_v1_chr10_-_116309764_116309835	1.43921	CACAGUG	ENSMUST00000068233.11|Kcnmb4|ENSMUSG00000054934.11|potassium large conductance calcium-activated channel, subfamily M, beta member 4
mm39_v1_chr8_-_92039850_92039905	1.4374	CACAGUG	ENSMUST00000047783.14|Rpgrip1l|ENSMUSG00000033282.15|Rpgrip1-like
mm39_v1_chr1_-_16689660_16689713	1.42827	CACAGUG	ENSMUST00000117146.9|Ube2w|ENSMUSG00000025939.20|ubiquitin-conjugating enzyme E2W (putative)
mm39_v1_chr10_-_86334700_86334730	1.41944	CACAGUG	ENSMUST00000120638.8|Syn3|ENSMUSG00000059602.15|synapsin III
mm39_v1_chr4_+_42916666_42916713	1.41145	CACAGUG	ENSMUST00000132173.8|Phf24|ENSMUSG00000036062.14|PHD finger protein 24	ENSMUST00000107975.8|Phf24|ENSMUSG00000036062.14|PHD finger protein 24
mm39_v1_chr11_-_113456568_113456618	1.38744	CACAGUG	ENSMUST00000071539.10|Slc39a11|ENSMUSG00000041654.16|solute carrier family 39 (metal ion transporter), member 11	ENSMUST00000106633.10|Slc39a11|ENSMUSG00000041654.16|solute carrier family 39 (metal ion transporter), member 11	ENSMUST00000042657.16|Slc39a11|ENSMUSG00000041654.16|solute carrier family 39 (metal ion transporter), member 11	ENSMUST00000149034.8|Slc39a11|ENSMUSG00000041654.16|solute carrier family 39 (metal ion transporter), member 11
mm39_v1_chr2_-_113588983_113589000	1.38694	CACAGUG	ENSMUST00000099575.4|Grem1|ENSMUSG00000074934.4|gremlin 1, DAN family BMP antagonist
mm39_v1_chr4_+_119671688_119671723	1.38391	CACAGUG	ENSMUST00000106307.9|Hivep3|ENSMUSG00000028634.18|human immunodeficiency virus type I enhancer binding protein 3
mm39_v1_chr17_-_91400499_91400504	1.37959	CACAGUG	ENSMUST00000160844.10|Nrxn1|ENSMUSG00000024109.19|neurexin I
mm39_v1_chr1_-_161704224_161704251	1.36649	CACAGUG	ENSMUST00000048377.11|Suco|ENSMUSG00000040297.13|SUN domain containing ossification factor
mm39_v1_chr11_-_46057224_46057335	1.34903	CACAGUG	ENSMUST00000020679.3|Nipal4|ENSMUSG00000020411.3|NIPA-like domain containing 4
mm39_v1_chr13_+_110531571_110531591	1.33234	CACAGUG	ENSMUST00000022212.9|Plk2|ENSMUSG00000021701.9|polo like kinase 2
mm39_v1_chr10_+_58091287_58091361	1.32285	CACAGUG	ENSMUST00000057659.14|Gcc2|ENSMUSG00000038039.14|GRIP and coiled-coil domain containing 2	ENSMUST00000162041.8|Gcc2|ENSMUSG00000038039.14|GRIP and coiled-coil domain containing 2	ENSMUST00000162860.8|Gcc2|ENSMUSG00000038039.14|GRIP and coiled-coil domain containing 2
mm39_v1_chr9_-_96513529_96513670	1.32207	CACAGUG	ENSMUST00000034984.8|Rasa2|ENSMUSG00000032413.13|RAS p21 protein activator 2
mm39_v1_chr18_-_72484126_72484140	1.31966	CACAGUG	ENSMUST00000114943.11|Dcc|ENSMUSG00000060534.17|deleted in colorectal carcinoma
mm39_v1_chr8_-_9821021_9821161	1.31634	CACAGUG	ENSMUST00000208933.2|Fam155a|ENSMUSG00000079157.5|family with sequence similarity 155, member A	ENSMUST00000110969.5|Fam155a|ENSMUSG00000079157.5|family with sequence similarity 155, member A
mm39_v1_chr5_-_74229021_74229099	1.30852	CACAGUG	ENSMUST00000119154.8|Usp46|ENSMUSG00000054814.15|ubiquitin specific peptidase 46	ENSMUST00000068058.14|Usp46|ENSMUSG00000054814.15|ubiquitin specific peptidase 46
mm39_v1_chr14_+_27344385_27344500	1.30508	CACAGUG	ENSMUST00000210135.2|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2	ENSMUST00000090302.6|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2	ENSMUST00000211087.2|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2
mm39_v1_chr2_-_181240921_181241028	1.26649	CACAGUG	ENSMUST00000060173.9|Samd10|ENSMUSG00000038605.12|sterile alpha motif domain containing 10
mm39_v1_chr11_-_85125889_85125963	1.26059	CACAGUG	ENSMUST00000018625.10|Appbp2|ENSMUSG00000018481.10|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
mm39_v1_chr6_-_136150076_136150146	1.25524	CACAGUG	ENSMUST00000053880.13|Grin2b|ENSMUSG00000030209.15|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm39_v1_chr4_-_46991842_46991916	1.25124	CACAGUG	ENSMUST00000107749.4|Gabbr2|ENSMUSG00000039809.11|gamma-aminobutyric acid (GABA) B receptor, 2
mm39_v1_chr3_+_145464413_145464451	1.24458	CACAGUG	ENSMUST00000029845.15|Ddah1|ENSMUSG00000028194.16|dimethylarginine dimethylaminohydrolase 1
mm39_v1_chr6_-_37276885_37276919	1.23369	CACAGUG	ENSMUST00000101532.10|Dgki|ENSMUSG00000038665.16|diacylglycerol kinase, iota
mm39_v1_chr11_+_31822211_31822263	1.2272	CACAGUG	ENSMUST00000020543.13|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4	ENSMUST00000109412.9|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4
mm39_v1_chr7_-_19043955_19043976	1.20753	CACAGUG	ENSMUST00000207334.2|Fosb|ENSMUSG00000003545.4|FBJ osteosarcoma oncogene B	ENSMUST00000208505.2|Fosb|ENSMUSG00000003545.4|FBJ osteosarcoma oncogene B	ENSMUST00000207716.2|Fosb|ENSMUSG00000003545.4|FBJ osteosarcoma oncogene B	ENSMUST00000208326.2|Fosb|ENSMUSG00000003545.4|FBJ osteosarcoma oncogene B	ENSMUST00000003640.4|Fosb|ENSMUSG00000003545.4|FBJ osteosarcoma oncogene B
mm39_v1_chr7_-_46782448_46782465	1.20378	CACAGUG	ENSMUST00000033142.13|Ptpn5|ENSMUSG00000030854.18|protein tyrosine phosphatase, non-receptor type 5
mm39_v1_chr5_+_73648368_73648452	1.19384	CACAGUG	ENSMUST00000113558.8|Dcun1d4|ENSMUSG00000051674.16|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	ENSMUST00000063882.12|Dcun1d4|ENSMUSG00000051674.16|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
mm39_v1_chr4_+_101276474_101276547	1.17925	CACAGUG	ENSMUST00000102780.8|Ak4|ENSMUSG00000028527.19|adenylate kinase 4	ENSMUST00000106946.8|Ak4|ENSMUSG00000028527.19|adenylate kinase 4	ENSMUST00000106945.8|Ak4|ENSMUSG00000028527.19|adenylate kinase 4
mm39_v1_chr8_-_36716445_36716670	1.17477	CACAGUG	ENSMUST00000239119.2|Lonrf1|ENSMUSG00000039633.8|LON peptidase N-terminal domain and ring finger 1	ENSMUST00000065297.6|Lonrf1|ENSMUSG00000039633.8|LON peptidase N-terminal domain and ring finger 1
mm39_v1_chr3_+_63883527_63883556	1.16733	CACAGUG	ENSMUST00000029405.8|Gmps|ENSMUSG00000027823.10|guanine monophosphate synthetase
mm39_v1_chr2_+_55327110_55327194	1.1509	CACAGUG	ENSMUST00000112633.3|Kcnj3|ENSMUSG00000026824.12|potassium inwardly-rectifying channel, subfamily J, member 3	ENSMUST00000112632.2|Kcnj3|ENSMUSG00000026824.12|potassium inwardly-rectifying channel, subfamily J, member 3
mm39_v1_chr6_-_55658242_55658255	1.13813	CACAGUG	ENSMUST00000044767.10|Neurod6|ENSMUSG00000037984.10|neurogenic differentiation 6
mm39_v1_chr11_-_119438569_119438585	1.10844	CACAGUG	ENSMUST00000026670.5|Nptx1|ENSMUSG00000025582.5|neuronal pentraxin 1
mm39_v1_chr5_+_99002293_99002325	1.10739	CACAGUG	ENSMUST00000031278.6|Bmp3|ENSMUSG00000029335.6|bone morphogenetic protein 3	ENSMUST00000200388.2|Bmp3|ENSMUSG00000029335.6|bone morphogenetic protein 3
mm39_v1_chr2_+_149672708_149672727	1.10014	CACAGUG	ENSMUST00000109935.8|Syndig1|ENSMUSG00000074736.11|synapse differentiation inducing 1
mm39_v1_chr7_+_109721230_109721342	1.09964	CACAGUG	ENSMUST00000033326.10|Wee1|ENSMUSG00000031016.10|WEE 1 homolog 1 (S. pombe)
mm39_v1_chr4_+_127062924_127063023	1.09591	CACAGUG	ENSMUST00000046659.14|Dlgap3|ENSMUSG00000042388.15|DLG associated protein 3
mm39_v1_chr14_+_60615128_60615153	1.08437	CACAGUG	ENSMUST00000022561.9|Amer2|ENSMUSG00000021986.10|APC membrane recruitment 2
mm39_v1_chr11_+_82279720_82279775	1.06972	CACAGUG	ENSMUST00000092852.6|Tmem132e|ENSMUSG00000020701.13|transmembrane protein 132E	ENSMUST00000054245.8|Tmem132e|ENSMUSG00000020701.13|transmembrane protein 132E
mm39_v1_chr3_+_105359641_105359688	1.06868	CACAGUG	ENSMUST00000098761.10|Kcnd3|ENSMUSG00000040896.17|potassium voltage-gated channel, Shal-related family, member 3
mm39_v1_chrX_+_98864627_98864627	1.06169	CACAGUG	ENSMUST00000096363.3|Tmem28|ENSMUSG00000071719.3|transmembrane protein 28
mm39_v1_chr19_+_28812474_28812541	1.04839	CACAGUG	ENSMUST00000025875.5|Slc1a1|ENSMUSG00000024935.12|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
mm39_v1_chr9_+_57847387_57847403	1.02639	CACAGUG	ENSMUST00000043059.9|Sema7a|ENSMUSG00000038264.9|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A
mm39_v1_chr11_+_93776965_93777045	1.0215	CACAGUG	ENSMUST00000063718.11|Mbtd1|ENSMUSG00000059474.14|mbt domain containing 1	ENSMUST00000107854.9|Mbtd1|ENSMUSG00000059474.14|mbt domain containing 1
mm39_v1_chr2_-_85027041_85027051	1.02126	CACAGUG	ENSMUST00000099930.9|Lrrc55|ENSMUSG00000075224.11|leucine rich repeat containing 55	ENSMUST00000111601.2|Lrrc55|ENSMUSG00000075224.11|leucine rich repeat containing 55
mm39_v1_chr7_-_123099672_123099799	1.01364	CACAGUG	ENSMUST00000042470.14|Zkscan2|ENSMUSG00000030757.14|zinc finger with KRAB and SCAN domains 2	ENSMUST00000128217.2|Zkscan2|ENSMUSG00000030757.14|zinc finger with KRAB and SCAN domains 2
mm39_v1_chr1_-_57011595_57011661	0.996062	CACAGUG	ENSMUST00000042857.14|Satb2|ENSMUSG00000038331.16|special AT-rich sequence binding protein 2
mm39_v1_chr11_+_78181667_78181710	0.970871	CACAGUG	ENSMUST00000046361.5|Rskr|ENSMUSG00000037593.13|ribosomal protein S6 kinase related	ENSMUST00000238934.2|Rskr|ENSMUSG00000037593.13|ribosomal protein S6 kinase related
mm39_v1_chr1_+_181180183_181180206	0.966677	CACAGUG	ENSMUST00000161880.8|Cnih3|ENSMUSG00000026514.15|cornichon family AMPA receptor auxiliary protein 3	ENSMUST00000027795.14|Cnih3|ENSMUSG00000026514.15|cornichon family AMPA receptor auxiliary protein 3
mm39_v1_chr2_+_181405106_181405148	0.962955	CACAGUG	ENSMUST00000081125.11|Myt1|ENSMUSG00000010505.17|myelin transcription factor 1
mm39_v1_chr5_-_135423353_135423412	0.954429	CACAGUG	ENSMUST00000111171.6|Pom121|ENSMUSG00000053293.10|nuclear pore membrane protein 121
mm39_v1_chr2_-_140513382_140513399	0.946464	CACAGUG	ENSMUST00000110057.3|Flrt3|ENSMUSG00000051379.13|fibronectin leucine rich transmembrane protein 3
mm39_v1_chrX_+_133305291_133305377	0.912166	CACAGUG	ENSMUST00000113228.8|Drp2|ENSMUSG00000000223.14|dystrophin related protein 2	ENSMUST00000153424.8|Drp2|ENSMUSG00000000223.14|dystrophin related protein 2
mm39_v1_chr11_+_74721733_74721746	0.906612	CACAGUG	ENSMUST00000000291.9|Mnt|ENSMUSG00000000282.13|max binding protein
mm39_v1_chr2_+_179684288_179684355	0.903279	CACAGUG	ENSMUST00000041126.9|Ss18l1|ENSMUSG00000039086.10|SS18, nBAF chromatin remodeling complex subunit like 1
mm39_v1_chr5_+_144037171_144037254	0.893919	CACAGUG	ENSMUST00000041804.8|Lmtk2|ENSMUSG00000038970.8|lemur tyrosine kinase 2
mm39_v1_chr8_+_110595216_110595243	0.892247	CACAGUG	ENSMUST00000179721.8|Phlpp2|ENSMUSG00000031732.13|PH domain and leucine rich repeat protein phosphatase 2	ENSMUST00000034175.5|Phlpp2|ENSMUSG00000031732.13|PH domain and leucine rich repeat protein phosphatase 2
mm39_v1_chr10_+_95350975_95351043	0.872352	CACAGUG	ENSMUST00000099329.5|Ube2n|ENSMUSG00000074781.6|ubiquitin-conjugating enzyme E2N
mm39_v1_chr19_-_12478803_12478818	0.872144	CACAGUG	ENSMUST00000045521.9|Dtx4|ENSMUSG00000039982.9|deltex 4, E3 ubiquitin ligase
mm39_v1_chr4_-_25800083_25800146	0.868771	CACAGUG	ENSMUST00000084770.5|Fut9|ENSMUSG00000055373.9|fucosyltransferase 9
mm39_v1_chr3_-_119576911_119577037	0.863422	CACAGUG	ENSMUST00000197464.5|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2	ENSMUST00000198403.2|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2	ENSMUST00000029780.12|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2
mm39_v1_chr1_-_132067404_132067430	0.86211	CACAGUG	ENSMUST00000027697.12|Cdk18|ENSMUSG00000026437.12|cyclin-dependent kinase 18
mm39_v1_chr5_-_120849992_120849992	0.861071	CACAGUG	ENSMUST00000031607.7|Dtx1|ENSMUSG00000029603.16|deltex 1, E3 ubiquitin ligase
mm39_v1_chr5_+_3593811_3593853	0.850098	CACAGUG	ENSMUST00000197082.5|Fam133b|ENSMUSG00000058503.12|family with sequence similarity 133, member B	ENSMUST00000115527.8|Fam133b|ENSMUSG00000058503.12|family with sequence similarity 133, member B
mm39_v1_chr17_+_15720150_15720222	0.84537	CACAGUG	ENSMUST00000159197.8|Tbp|ENSMUSG00000014767.18|TATA box binding protein	ENSMUST00000014911.12|Tbp|ENSMUSG00000014767.18|TATA box binding protein	ENSMUST00000162505.8|Tbp|ENSMUSG00000014767.18|TATA box binding protein	ENSMUST00000147081.9|Tbp|ENSMUSG00000014767.18|TATA box binding protein	ENSMUST00000118001.8|Tbp|ENSMUSG00000014767.18|TATA box binding protein	ENSMUST00000143924.8|Tbp|ENSMUSG00000014767.18|TATA box binding protein	ENSMUST00000119879.9|Tbp|ENSMUSG00000014767.18|TATA box binding protein	ENSMUST00000155051.8|Tbp|ENSMUSG00000014767.18|TATA box binding protein	ENSMUST00000117593.8|Tbp|ENSMUSG00000014767.18|TATA box binding protein
mm39_v1_chr17_+_37356854_37356869	0.845349	CACAGUG	ENSMUST00000025338.16|Gabbr1|ENSMUSG00000024462.18|gamma-aminobutyric acid (GABA) B receptor, 1
mm39_v1_chr5_-_103247920_103247954	0.833054	CACAGUG	ENSMUST00000112848.8|Mapk10|ENSMUSG00000046709.19|mitogen-activated protein kinase 10
mm39_v1_chr4_-_148123223_148123278	0.829657	CACAGUG	ENSMUST00000030879.12|Clcn6|ENSMUSG00000029016.14|chloride channel, voltage-sensitive 6	ENSMUST00000137724.8|Clcn6|ENSMUSG00000029016.14|chloride channel, voltage-sensitive 6
mm39_v1_chr5_+_144482693_144482712	0.827315	CACAGUG	ENSMUST00000071782.8|Nptx2|ENSMUSG00000059991.8|neuronal pentraxin 2
mm39_v1_chr2_+_32425327_32425371	0.821914	CACAGUG	ENSMUST00000133512.2|Fam102a|ENSMUSG00000039157.13|family with sequence similarity 102, member A	ENSMUST00000048375.6|Fam102a|ENSMUSG00000039157.13|family with sequence similarity 102, member A
mm39_v1_chr1_-_54596754_54596856	0.821223	CACAGUG	ENSMUST00000097739.5|Pgap1|ENSMUSG00000073678.5|post-GPI attachment to proteins 1
mm39_v1_chr12_-_110662765_110662852	0.817483	CACAGUG	ENSMUST00000094361.11|Hsp90aa1|ENSMUSG00000021270.14|heat shock protein 90, alpha (cytosolic), class A member 1
mm39_v1_chr4_+_32657105_32657167	0.803364	CACAGUG	ENSMUST00000071642.11|Mdn1|ENSMUSG00000058006.13|midasin AAA ATPase 1	ENSMUST00000178134.2|Mdn1|ENSMUSG00000058006.13|midasin AAA ATPase 1
mm39_v1_chr10_+_106306122_106306228	0.803093	CACAGUG	ENSMUST00000029404.17|Ppfia2|ENSMUSG00000053825.16|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	ENSMUST00000217854.2|Ppfia2|ENSMUSG00000053825.16|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm39_v1_chr17_+_74111823_74111836	0.79736	CACAGUG	ENSMUST00000024860.9|Ehd3|ENSMUSG00000024065.9|EH-domain containing 3
mm39_v1_chr19_+_10366753_10366847	0.795384	CACAGUG	ENSMUST00000169121.9|Syt7|ENSMUSG00000024743.17|synaptotagmin VII	ENSMUST00000076968.11|Syt7|ENSMUSG00000024743.17|synaptotagmin VII	ENSMUST00000235479.2|Syt7|ENSMUSG00000024743.17|synaptotagmin VII	ENSMUST00000223586.2|Syt7|ENSMUSG00000024743.17|synaptotagmin VII	ENSMUST00000235784.2|Syt7|ENSMUSG00000024743.17|synaptotagmin VII	ENSMUST00000224135.3|Syt7|ENSMUSG00000024743.17|synaptotagmin VII	ENSMUST00000225452.3|Syt7|ENSMUSG00000024743.17|synaptotagmin VII	ENSMUST00000237366.2|Syt7|ENSMUSG00000024743.17|synaptotagmin VII
mm39_v1_chr5_-_99400698_99400786	0.793186	CACAGUG	ENSMUST00000031276.15|Rasgef1b|ENSMUSG00000089809.10|RasGEF domain family, member 1B	ENSMUST00000168092.8|Rasgef1b|ENSMUSG00000089809.10|RasGEF domain family, member 1B
mm39_v1_chr9_+_66620959_66620999	0.768989	CACAGUG	ENSMUST00000071889.13|Car12|ENSMUSG00000032373.16|carbonic anhydrase 12
mm39_v1_chr7_+_90739904_90739959	0.768039	CACAGUG	ENSMUST00000107196.10|Dlg2|ENSMUSG00000052572.20|discs large MAGUK scaffold protein 2	ENSMUST00000074273.10|Dlg2|ENSMUSG00000052572.20|discs large MAGUK scaffold protein 2
mm39_v1_chr13_-_110416637_110416747	0.767662	CACAGUG	ENSMUST00000167824.3|Rab3c|ENSMUSG00000021700.11|RAB3C, member RAS oncogene family	ENSMUST00000224180.2|Rab3c|ENSMUSG00000021700.11|RAB3C, member RAS oncogene family
mm39_v1_chr15_+_103411461_103411473	0.767322	CACAGUG	ENSMUST00000023132.5|Pde1b|ENSMUSG00000022489.7|phosphodiesterase 1B, Ca2+-calmodulin dependent
mm39_v1_chr2_-_115896279_115896334	0.759533	CACAGUG	ENSMUST00000110907.8|Meis2|ENSMUSG00000027210.21|Meis homeobox 2	ENSMUST00000110908.9|Meis2|ENSMUSG00000027210.21|Meis homeobox 2
mm39_v1_chr15_-_102425241_102425499	0.75792	CACAGUG	ENSMUST00000169162.8|Map3k12|ENSMUSG00000023050.10|mitogen-activated protein kinase kinase kinase 12	ENSMUST00000023812.10|Map3k12|ENSMUSG00000023050.10|mitogen-activated protein kinase kinase kinase 12	ENSMUST00000165174.8|Map3k12|ENSMUSG00000023050.10|mitogen-activated protein kinase kinase kinase 12	ENSMUST00000169367.8|Map3k12|ENSMUSG00000023050.10|mitogen-activated protein kinase kinase kinase 12	ENSMUST00000169377.8|Map3k12|ENSMUSG00000023050.10|mitogen-activated protein kinase kinase kinase 12
mm39_v1_chr3_+_36917251_36917296	0.750076	CACAGUG	ENSMUST00000057272.15|4932438A13Rik|ENSMUSG00000037270.19|RIKEN cDNA 4932438A13 gene
mm39_v1_chr8_-_61436249_61436353	0.738458	CACAGUG	ENSMUST00000004430.14|Clcn3|ENSMUSG00000004319.16|chloride channel, voltage-sensitive 3	ENSMUST00000110301.2|Clcn3|ENSMUSG00000004319.16|chloride channel, voltage-sensitive 3	ENSMUST00000093490.9|Clcn3|ENSMUSG00000004319.16|chloride channel, voltage-sensitive 3
mm39_v1_chr17_+_34258411_34258455	0.737431	CACAGUG	ENSMUST00000087497.11|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000131134.9|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000235819.2|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000114255.9|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000114252.9|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000237989.2|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2
mm39_v1_chr19_+_3901797_3901840	0.710035	CACAGUG	ENSMUST00000072055.13|Chka|ENSMUSG00000024843.16|choline kinase alpha
mm39_v1_chr2_-_79959178_79959339	0.704334	CACAGUG	ENSMUST00000102654.11|Pde1a|ENSMUSG00000059173.20|phosphodiesterase 1A, calmodulin-dependent	ENSMUST00000102655.10|Pde1a|ENSMUSG00000059173.20|phosphodiesterase 1A, calmodulin-dependent
mm39_v1_chr15_+_85220438_85220479	0.703805	CACAGUG	ENSMUST00000163242.3|Atxn10|ENSMUSG00000016541.11|ataxin 10
mm39_v1_chr2_+_173918715_173918859	0.700349	CACAGUG	ENSMUST00000087908.10|Stx16|ENSMUSG00000027522.16|syntaxin 16	ENSMUST00000044638.13|Stx16|ENSMUSG00000027522.16|syntaxin 16	ENSMUST00000156054.2|Stx16|ENSMUSG00000027522.16|syntaxin 16
mm39_v1_chr19_+_53517528_53517545	0.698031	CACAGUG	ENSMUST00000038287.7|Dusp5|ENSMUSG00000034765.7|dual specificity phosphatase 5
mm39_v1_chr12_+_102095260_102095433	0.694769	CACAGUG	ENSMUST00000079020.12|Slc24a4|ENSMUSG00000041771.15|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
mm39_v1_chr5_-_37874461_37874523	0.694531	CACAGUG	ENSMUST00000094836.6|Stk32b|ENSMUSG00000029123.9|serine/threonine kinase 32B
mm39_v1_chr4_+_120711974_120712041	0.691271	CACAGUG	ENSMUST00000071093.9|Rims3|ENSMUSG00000032890.18|regulating synaptic membrane exocytosis 3
mm39_v1_chr3_-_32419609_32419840	0.670115	CACAGUG	ENSMUST00000139660.2|Zmat3|ENSMUSG00000027663.13|zinc finger matrin type 3	ENSMUST00000168566.3|Zmat3|ENSMUSG00000027663.13|zinc finger matrin type 3	ENSMUST00000029199.11|Zmat3|ENSMUSG00000027663.13|zinc finger matrin type 3
mm39_v1_chr9_+_83430363_83430393	0.666632	CACAGUG	ENSMUST00000188241.7|Sh3bgrl2|ENSMUSG00000032261.17|SH3 domain binding glutamic acid-rich protein like 2	ENSMUST00000113215.10|Sh3bgrl2|ENSMUSG00000032261.17|SH3 domain binding glutamic acid-rich protein like 2
mm39_v1_chr13_+_104315301_104315374	0.665849	CACAGUG	ENSMUST00000022225.12|Trim23|ENSMUSG00000021712.16|tripartite motif-containing 23	ENSMUST00000069187.12|Trim23|ENSMUSG00000021712.16|tripartite motif-containing 23
mm39_v1_chr14_-_70864666_70864748	0.656704	CACAGUG	ENSMUST00000022694.17|Dmtn|ENSMUSG00000022099.18|dematin actin binding protein
mm39_v1_chr7_+_24335969_24335989	0.65566	CACAGUG	ENSMUST00000080718.6|Lypd3|ENSMUSG00000057454.6|Ly6/Plaur domain containing 3
mm39_v1_chr12_-_59266511_59266563	0.650671	CACAGUG	ENSMUST00000043204.8|Fbxo33|ENSMUSG00000035329.8|F-box protein 33
mm39_v1_chr5_-_67585137_67585157	0.646477	CACAGUG	ENSMUST00000169190.5|Bend4|ENSMUSG00000092060.5|BEN domain containing 4
mm39_v1_chr17_-_25155868_25155976	0.64627	CACAGUG	ENSMUST00000115228.9|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000117509.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000121723.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000119115.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000121787.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000088345.12|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000120035.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000115229.10|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000178969.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3
mm39_v1_chr7_+_63094489_63094510	0.642358	CACAGUG	ENSMUST00000058476.14|Otud7a|ENSMUSG00000033510.15|OTU domain containing 7A
mm39_v1_chr14_-_54878804_54878834	0.639546	CACAGUG	ENSMUST00000067784.8|Cdh24|ENSMUSG00000059674.8|cadherin-like 24
mm39_v1_chr2_-_58247764_58247907	0.630726	CACAGUG	ENSMUST00000112608.9|Acvr1c|ENSMUSG00000026834.14|activin A receptor, type IC	ENSMUST00000112607.3|Acvr1c|ENSMUSG00000026834.14|activin A receptor, type IC	ENSMUST00000028178.14|Acvr1c|ENSMUSG00000026834.14|activin A receptor, type IC
mm39_v1_chr11_-_95200382_95200428	0.629862	CACAGUG	ENSMUST00000092766.12|Kat7|ENSMUSG00000038909.17|K(lysine) acetyltransferase 7	ENSMUST00000072621.12|Kat7|ENSMUSG00000038909.17|K(lysine) acetyltransferase 7
mm39_v1_chr6_+_95094721_95094938	0.628671	CACAGUG	ENSMUST00000032107.10|Kbtbd8|ENSMUSG00000030031.15|kelch repeat and BTB (POZ) domain containing 8	ENSMUST00000119582.3|Kbtbd8|ENSMUSG00000030031.15|kelch repeat and BTB (POZ) domain containing 8
mm39_v1_chr15_+_12824901_12824919	0.624679	CACAGUG	ENSMUST00000169061.8|Drosha|ENSMUSG00000022191.17|drosha, ribonuclease type III
mm39_v1_chr16_+_41353360_41353429	0.622456	CACAGUG	ENSMUST00000099761.10|Lsamp|ENSMUSG00000061080.12|limbic system-associated membrane protein
mm39_v1_chr6_-_72935468_72935479	0.616302	CACAGUG	ENSMUST00000114050.8|Tmsb10|ENSMUSG00000079523.9|thymosin, beta 10
mm39_v1_chr2_+_57127665_57127741	0.614946	CACAGUG	ENSMUST00000169687.8|Gpd2|ENSMUSG00000026827.13|glycerol phosphate dehydrogenase 2, mitochondrial
mm39_v1_chr7_-_57036920_57036972	0.611811	CACAGUG	ENSMUST00000068911.13|Gabrg3|ENSMUSG00000055026.14|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3
mm39_v1_chr8_-_47805383_47805401	0.602796	CACAGUG	ENSMUST00000110367.10|Stox2|ENSMUSG00000038143.17|storkhead box 2
mm39_v1_chr9_+_64292957_64292980	0.595073	CACAGUG	ENSMUST00000068967.11|Megf11|ENSMUSG00000036466.18|multiple EGF-like-domains 11
mm39_v1_chr3_-_62512561_62512561	0.591812	CACAGUG	ENSMUST00000058535.6|Gpr149|ENSMUSG00000043441.6|G protein-coupled receptor 149
mm39_v1_chr2_-_124965537_124965581	0.589763	CACAGUG	ENSMUST00000142718.8|Myef2|ENSMUSG00000027201.17|myelin basic protein expression factor 2, repressor	ENSMUST00000152367.8|Myef2|ENSMUSG00000027201.17|myelin basic protein expression factor 2, repressor	ENSMUST00000067780.10|Myef2|ENSMUSG00000027201.17|myelin basic protein expression factor 2, repressor	ENSMUST00000147105.8|Myef2|ENSMUSG00000027201.17|myelin basic protein expression factor 2, repressor
mm39_v1_chr7_-_35453818_35453879	0.587491	CACAGUG	ENSMUST00000051377.15|Dpy19l3|ENSMUSG00000043671.15|dpy-19-like 3 (C. elegans)
mm39_v1_chr13_+_20274708_20274803	0.586309	CACAGUG	ENSMUST00000072519.7|Elmo1|ENSMUSG00000041112.18|engulfment and cell motility 1
mm39_v1_chr2_-_104240679_104240679	0.581897	CACAGUG	ENSMUST00000136156.9|D430041D05Rik|ENSMUSG00000068373.16|RIKEN cDNA D430041D05 gene	ENSMUST00000141159.9|D430041D05Rik|ENSMUSG00000068373.16|RIKEN cDNA D430041D05 gene	ENSMUST00000089726.10|D430041D05Rik|ENSMUSG00000068373.16|RIKEN cDNA D430041D05 gene
mm39_v1_chr2_+_163836880_163836880	0.57519	CACAGUG	ENSMUST00000018470.10|Ywhab|ENSMUSG00000018326.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm39_v1_chr14_-_45096827_45096839	0.570054	CACAGUG	ENSMUST00000095959.2|Ptgdr|ENSMUSG00000071489.2|prostaglandin D receptor
mm39_v1_chr7_-_100021514_100021514	0.569412	CACAGUG	ENSMUST00000032963.10|Ppme1|ENSMUSG00000030718.10|protein phosphatase methylesterase 1
mm39_v1_chr13_-_116446166_116446235	0.56679	CACAGUG	ENSMUST00000036060.13|Isl1|ENSMUSG00000042258.14|ISL1 transcription factor, LIM/homeodomain
mm39_v1_chr7_+_133239272_133239288	0.559572	CACAGUG	ENSMUST00000051169.13|Edrf1|ENSMUSG00000039990.17|erythroid differentiation regulatory factor 1
mm39_v1_chrX_+_141009756_141009775	0.554691	CACAGUG	ENSMUST00000112916.9|Nxt2|ENSMUSG00000042271.14|nuclear transport factor 2-like export factor 2
mm39_v1_chr7_-_44024429_44024459	0.552887	CACAGUG	ENSMUST00000107933.8|1700008O03Rik|ENSMUSG00000008028.16|RIKEN cDNA 1700008O03 gene
mm39_v1_chr12_+_81678143_81678169	0.552332	CACAGUG	ENSMUST00000036116.6|Ttc9|ENSMUSG00000042734.7|tetratricopeptide repeat domain 9
mm39_v1_chr5_-_134717443_134717491	0.551588	CACAGUG	ENSMUST00000015137.10|Limk1|ENSMUSG00000029674.14|LIM-domain containing, protein kinase
mm39_v1_chr2_+_28531239_28531274	0.549282	CACAGUG	ENSMUST00000028155.12|Tsc1|ENSMUSG00000026812.17|TSC complex subunit 1	ENSMUST00000113869.8|Tsc1|ENSMUSG00000026812.17|TSC complex subunit 1	ENSMUST00000113867.9|Tsc1|ENSMUSG00000026812.17|TSC complex subunit 1
mm39_v1_chr2_-_168576155_168576259	0.54495	CACAGUG	ENSMUST00000109175.9|Atp9a|ENSMUSG00000027546.16|ATPase, class II, type 9A
mm39_v1_chr9_-_75518585_75518616	0.543833	CACAGUG	ENSMUST00000098552.10|Tmod2|ENSMUSG00000032186.16|tropomodulin 2	ENSMUST00000064433.11|Tmod2|ENSMUSG00000032186.16|tropomodulin 2
mm39_v1_chr10_+_98750978_98751034	0.528346	CACAGUG	ENSMUST00000020107.8|Atp2b1|ENSMUSG00000019943.11|ATPase, Ca++ transporting, plasma membrane 1
mm39_v1_chr3_+_101284391_101284421	0.523378	CACAGUG	ENSMUST00000043983.11|Igsf3|ENSMUSG00000042035.12|immunoglobulin superfamily, member 3
mm39_v1_chr12_-_4788415_4788444	0.521441	CACAGUG	ENSMUST00000111154.4|Fam228a|ENSMUSG00000079177.5|family with sequence similarity 228, member A
mm39_v1_chr1_-_97589675_97589799	0.51191	CACAGUG	ENSMUST00000053033.14|Macir|ENSMUSG00000044768.17|macrophage immunometabolism regulator	ENSMUST00000149927.2|Macir|ENSMUSG00000044768.17|macrophage immunometabolism regulator
mm39_v1_chr2_+_69553141_69553189	0.508742	CACAGUG	ENSMUST00000090858.10|Ppig|ENSMUSG00000042133.17|peptidyl-prolyl isomerase G (cyclophilin G)
mm39_v1_chr13_-_69147639_69147684	0.506925	CACAGUG	ENSMUST00000022013.8|Adcy2|ENSMUSG00000021536.8|adenylate cyclase 2
mm39_v1_chr9_+_70586232_70586292	0.505035	CACAGUG	ENSMUST00000067880.13|Adam10|ENSMUSG00000054693.15|a disintegrin and metallopeptidase domain 10
mm39_v1_chr7_-_83533497_83533523	0.503242	CACAGUG	ENSMUST00000094216.5|Tlnrd1|ENSMUSG00000070462.5|talin rod domain containing 1
mm39_v1_chr14_+_48358267_48358285	0.501933	CACAGUG	ENSMUST00000073150.6|Peli2|ENSMUSG00000021846.10|pellino 2
mm39_v1_chr15_-_103248512_103248527	0.500169	CACAGUG	ENSMUST00000168828.3|Zfp385a|ENSMUSG00000000552.11|zinc finger protein 385A
mm39_v1_chr11_+_97306353_97306402	0.4944	CACAGUG	ENSMUST00000121799.8|Arhgap23|ENSMUSG00000049807.17|Rho GTPase activating protein 23
mm39_v1_chr1_+_70764874_70765082	0.48126	CACAGUG	ENSMUST00000053922.12|Vwc2l|ENSMUSG00000045648.16|von Willebrand factor C domain-containing protein 2-like	ENSMUST00000161937.2|Vwc2l|ENSMUSG00000045648.16|von Willebrand factor C domain-containing protein 2-like	ENSMUST00000162182.2|Vwc2l|ENSMUSG00000045648.16|von Willebrand factor C domain-containing protein 2-like
mm39_v1_chr1_+_166081664_166081722	0.479096	CACAGUG	ENSMUST00000111416.7|Ildr2|ENSMUSG00000040612.14|immunoglobulin-like domain containing receptor 2
mm39_v1_chr8_-_103512274_103512408	0.478617	CACAGUG	ENSMUST00000075190.5|Cdh11|ENSMUSG00000031673.7|cadherin 11
mm39_v1_chr17_+_84819260_84819342	0.477718	CACAGUG	ENSMUST00000047206.7|Plekhh2|ENSMUSG00000040852.7|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
mm39_v1_chr6_-_126621751_126621768	0.474275	CACAGUG	ENSMUST00000055168.5|Kcna1|ENSMUSG00000047976.5|potassium voltage-gated channel, shaker-related subfamily, member 1
mm39_v1_chr9_-_44710480_44710604	0.473939	CACAGUG	ENSMUST00000214833.2|Tmem25|ENSMUSG00000002032.18|transmembrane protein 25	ENSMUST00000213972.2|Tmem25|ENSMUSG00000002032.18|transmembrane protein 25	ENSMUST00000214431.2|Tmem25|ENSMUSG00000002032.18|transmembrane protein 25	ENSMUST00000213363.2|Tmem25|ENSMUSG00000002032.18|transmembrane protein 25	ENSMUST00000114705.9|Tmem25|ENSMUSG00000002032.18|transmembrane protein 25	ENSMUST00000002100.8|Tmem25|ENSMUSG00000002032.18|transmembrane protein 25
mm39_v1_chr5_-_22549688_22549708	0.47143	CACAGUG	ENSMUST00000062372.14|Reln|ENSMUSG00000042453.15|reelin	ENSMUST00000161356.8|Reln|ENSMUSG00000042453.15|reelin
mm39_v1_chr9_+_108337726_108337771	0.468284	CACAGUG	ENSMUST00000061209.7|Ccdc71|ENSMUSG00000049305.7|coiled-coil domain containing 71	ENSMUST00000193269.2|Ccdc71|ENSMUSG00000049305.7|coiled-coil domain containing 71
mm39_v1_chr18_+_10325148_10325222	0.465764	CACAGUG	ENSMUST00000048977.16|Greb1l|ENSMUSG00000042942.19|growth regulation by estrogen in breast cancer-like
mm39_v1_chr12_+_108145997_108146089	0.464991	CACAGUG	ENSMUST00000101055.5|Ccnk|ENSMUSG00000021258.11|cyclin K
mm39_v1_chr9_-_57513510_57513564	0.463473	CACAGUG	ENSMUST00000215487.2|Cplx3|ENSMUSG00000039714.10|complexin 3	ENSMUST00000045068.10|Cplx3|ENSMUSG00000039714.10|complexin 3
mm39_v1_chr19_-_10434837_10434922	0.457878	CACAGUG	ENSMUST00000171400.4|Lrrc10b|ENSMUSG00000090291.4|leucine rich repeat containing 10B
mm39_v1_chr1_-_23961379_23961508	0.457809	CACAGUG	ENSMUST00000027339.14|Smap1|ENSMUSG00000026155.14|small ArfGAP 1
mm39_v1_chrX_-_103024847_103024893	0.456376	CACAGUG	ENSMUST00000121153.8|Rlim|ENSMUSG00000056537.12|ring finger protein, LIM domain interacting	ENSMUST00000070705.6|Rlim|ENSMUSG00000056537.12|ring finger protein, LIM domain interacting
mm39_v1_chrX_+_55419876_55419977	0.452383	CACAGUG	ENSMUST00000068106.5|Smim10l2a|ENSMUSG00000054850.5|small integral membrane protein 10 like 2A
mm39_v1_chr3_-_107425316_107425339	0.449813	CACAGUG	ENSMUST00000169449.8|Slc6a17|ENSMUSG00000027894.15|solute carrier family 6 (neurotransmitter transporter), member 17	ENSMUST00000029499.15|Slc6a17|ENSMUSG00000027894.15|solute carrier family 6 (neurotransmitter transporter), member 17
mm39_v1_chr4_-_129566505_129566567	0.447836	CACAGUG	ENSMUST00000102590.11|Kpna6|ENSMUSG00000003731.14|karyopherin (importin) alpha 6
mm39_v1_chr15_-_63932288_63932327	0.437866	CACAGUG	ENSMUST00000063838.11|Cyrib|ENSMUSG00000022378.15|CYFIP related Rac1 interactor B	ENSMUST00000228908.2|Cyrib|ENSMUSG00000022378.15|CYFIP related Rac1 interactor B
mm39_v1_chr6_+_54658609_54658770	0.425636	CACAGUG	ENSMUST00000190641.7|Mturn|ENSMUSG00000038065.14|maturin, neural progenitor differentiation regulator homolog (Xenopus)	ENSMUST00000187701.2|Mturn|ENSMUSG00000038065.14|maturin, neural progenitor differentiation regulator homolog (Xenopus)
mm39_v1_chr4_+_109264284_109264364	0.425469	CACAGUG	ENSMUST00000064129.14|Ttc39a|ENSMUSG00000028555.16|tetratricopeptide repeat domain 39A	ENSMUST00000106619.8|Ttc39a|ENSMUSG00000028555.16|tetratricopeptide repeat domain 39A
mm39_v1_chr6_-_53797748_53797822	0.422647	CACAGUG	ENSMUST00000127748.5|Tril|ENSMUSG00000043496.8|TLR4 interactor with leucine-rich repeats
mm39_v1_chr2_+_29951859_29951880	0.420358	CACAGUG	ENSMUST00000102866.10|Set|ENSMUSG00000054766.14|SET nuclear oncogene
mm39_v1_chr7_-_83801073_83801152	0.419238	CACAGUG	ENSMUST00000117085.2|Abhd17c|ENSMUSG00000038459.11|abhydrolase domain containing 17C
mm39_v1_chr14_+_3575879_3575951	0.41136	CACAGUG	ENSMUST00000150727.8|Ube2e2|ENSMUSG00000058317.13|ubiquitin-conjugating enzyme E2E 2
mm39_v1_chr2_-_167473892_167474015	0.407605	CACAGUG	ENSMUST00000060645.13|Ube2v1|ENSMUSG00000078923.11|ubiquitin-conjugating enzyme E2 variant 1	ENSMUST00000140216.2|Ube2v1|ENSMUSG00000078923.11|ubiquitin-conjugating enzyme E2 variant 1	ENSMUST00000151365.8|Ube2v1|ENSMUSG00000078923.11|ubiquitin-conjugating enzyme E2 variant 1	ENSMUST00000109207.10|Ube2v1|ENSMUSG00000078923.11|ubiquitin-conjugating enzyme E2 variant 1
mm39_v1_chr7_+_109617456_109617481	0.406581	CACAGUG	ENSMUST00000084731.5|Ipo7|ENSMUSG00000066232.5|importin 7
mm39_v1_chr11_+_98754434_98754472	0.40568	CACAGUG	ENSMUST00000142414.8|Wipf2|ENSMUSG00000038013.15|WAS/WASL interacting protein family, member 2	ENSMUST00000037480.9|Wipf2|ENSMUSG00000038013.15|WAS/WASL interacting protein family, member 2
mm39_v1_chr3_+_157653051_157653148	0.403892	CACAGUG	ENSMUST00000164582.4|Ankrd13c|ENSMUSG00000039988.15|ankyrin repeat domain 13c	ENSMUST00000040787.13|Ankrd13c|ENSMUSG00000039988.15|ankyrin repeat domain 13c
mm39_v1_chr6_+_55428963_55429042	0.399872	CACAGUG	ENSMUST00000070736.12|Adcyap1r1|ENSMUSG00000029778.13|adenylate cyclase activating polypeptide 1 receptor 1	ENSMUST00000070756.12|Adcyap1r1|ENSMUSG00000029778.13|adenylate cyclase activating polypeptide 1 receptor 1	ENSMUST00000166962.8|Adcyap1r1|ENSMUSG00000029778.13|adenylate cyclase activating polypeptide 1 receptor 1
mm39_v1_chr11_-_79145489_79145506	0.399708	CACAGUG	ENSMUST00000017821.12|Wsb1|ENSMUSG00000017677.12|WD repeat and SOCS box-containing 1
mm39_v1_chr12_-_46865709_46865720	0.399667	CACAGUG	ENSMUST00000021438.8|Nova1|ENSMUSG00000021047.8|NOVA alternative splicing regulator 1
mm39_v1_chr8_+_84334805_84334827	0.398088	CACAGUG	ENSMUST00000005620.10|Dnajb1|ENSMUSG00000005483.11|DnaJ heat shock protein family (Hsp40) member B1
mm39_v1_chr18_-_34139972_34140042	0.395776	CACAGUG	ENSMUST00000025234.7|Epb41l4a|ENSMUSG00000024376.8|erythrocyte membrane protein band 4.1 like 4a
mm39_v1_chr17_+_26633794_26633939	0.392223	CACAGUG	ENSMUST00000182897.8|Neurl1b|ENSMUSG00000034413.15|neuralized E3 ubiquitin protein ligase 1B	ENSMUST00000183077.8|Neurl1b|ENSMUSG00000034413.15|neuralized E3 ubiquitin protein ligase 1B	ENSMUST00000053020.8|Neurl1b|ENSMUSG00000034413.15|neuralized E3 ubiquitin protein ligase 1B
mm39_v1_chr11_+_105069591_105069633	0.387311	CACAGUG	ENSMUST00000106939.9|Tlk2|ENSMUSG00000020694.18|tousled-like kinase 2 (Arabidopsis)
mm39_v1_chr18_+_43340616_43340648	0.386695	CACAGUG	ENSMUST00000045477.6|Stk32a|ENSMUSG00000039954.10|serine/threonine kinase 32A
mm39_v1_chr13_+_38010203_38010291	0.38153	CACAGUG	ENSMUST00000128570.9|Rreb1|ENSMUSG00000039087.18|ras responsive element binding protein 1
mm39_v1_chr2_-_120801186_120801242	0.381429	CACAGUG	ENSMUST00000028728.6|Ubr1|ENSMUSG00000027272.6|ubiquitin protein ligase E3 component n-recognin 1
mm39_v1_chr12_-_100995242_100995302	0.381366	CACAGUG	ENSMUST00000085096.10|Ccdc88c|ENSMUSG00000021182.17|coiled-coil domain containing 88C
mm39_v1_chr4_-_111759951_111760115	0.372944	CACAGUG	ENSMUST00000102719.8|Slc5a9|ENSMUSG00000028544.15|solute carrier family 5 (sodium/glucose cotransporter), member 9	ENSMUST00000102721.8|Slc5a9|ENSMUSG00000028544.15|solute carrier family 5 (sodium/glucose cotransporter), member 9
mm39_v1_chr5_+_150597204_150597269	0.372036	CACAGUG	ENSMUST00000202170.4|Pds5b|ENSMUSG00000034021.16|PDS5 cohesin associated factor B	ENSMUST00000016569.11|Pds5b|ENSMUSG00000034021.16|PDS5 cohesin associated factor B
mm39_v1_chr13_+_31740117_31740117	0.368878	CACAGUG	ENSMUST00000042118.11|Foxq1|ENSMUSG00000038415.11|forkhead box Q1
mm39_v1_chr15_-_53765869_53765926	0.366695	CACAGUG	ENSMUST00000078673.14|Samd12|ENSMUSG00000058656.14|sterile alpha motif domain containing 12
mm39_v1_chr1_+_156386414_156386619	0.360428	CACAGUG	ENSMUST00000166172.9|Abl2|ENSMUSG00000026596.14|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)	ENSMUST00000027888.13|Abl2|ENSMUSG00000026596.14|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)
mm39_v1_chr2_-_39080701_39080762	0.35398	CACAGUG	ENSMUST00000142872.2|Scai|ENSMUSG00000035236.18|suppressor of cancer cell invasion	ENSMUST00000038874.12|Scai|ENSMUSG00000035236.18|suppressor of cancer cell invasion
mm39_v1_chr10_+_12966532_12966587	0.347238	CACAGUG	ENSMUST00000121646.8|Plagl1|ENSMUSG00000019817.19|pleiomorphic adenoma gene-like 1	ENSMUST00000121325.8|Plagl1|ENSMUSG00000019817.19|pleiomorphic adenoma gene-like 1	ENSMUST00000121766.8|Plagl1|ENSMUSG00000019817.19|pleiomorphic adenoma gene-like 1
mm39_v1_chr15_+_58287305_58287361	0.346912	CACAGUG	ENSMUST00000037270.5|Fam91a1|ENSMUSG00000037119.5|family with sequence similarity 91, member A1
mm39_v1_chr12_+_86994117_86994204	0.346497	CACAGUG	ENSMUST00000187814.7|Cipc|ENSMUSG00000034157.13|CLOCK interacting protein, circadian	ENSMUST00000038369.11|Cipc|ENSMUSG00000034157.13|CLOCK interacting protein, circadian
mm39_v1_chr18_+_44513547_44513644	0.336007	CACAGUG	ENSMUST00000202306.2|Dcp2|ENSMUSG00000024472.10|decapping mRNA 2	ENSMUST00000025350.10|Dcp2|ENSMUSG00000024472.10|decapping mRNA 2
mm39_v1_chr10_-_94780695_94780724	0.335284	CACAGUG	ENSMUST00000099337.5|Plxnc1|ENSMUSG00000074785.6|plexin C1
mm39_v1_chr5_-_110596352_110596385	0.332271	CACAGUG	ENSMUST00000069483.12|Fbrsl1|ENSMUSG00000043323.18|fibrosin-like 1	ENSMUST00000200293.2|Fbrsl1|ENSMUSG00000043323.18|fibrosin-like 1
mm39_v1_chr11_+_77985486_77985504	0.33224	CACAGUG	ENSMUST00000073705.12|Fam222b|ENSMUSG00000037750.17|family with sequence similarity 222, member B
mm39_v1_chr9_-_49710190_49710231	0.332109	CACAGUG	ENSMUST00000114476.8|Ncam1|ENSMUSG00000039542.17|neural cell adhesion molecule 1	ENSMUST00000193547.6|Ncam1|ENSMUSG00000039542.17|neural cell adhesion molecule 1
mm39_v1_chr11_+_98686321_98686421	0.331708	CACAGUG	ENSMUST00000037915.9|Msl1|ENSMUSG00000052915.15|male specific lethal 1
mm39_v1_chr11_-_82719850_82719869	0.328864	CACAGUG	ENSMUST00000021036.13|Rffl|ENSMUSG00000020696.19|ring finger and FYVE like domain containing protein	ENSMUST00000074515.11|Rffl|ENSMUSG00000020696.19|ring finger and FYVE like domain containing protein	ENSMUST00000103218.3|Rffl|ENSMUSG00000020696.19|ring finger and FYVE like domain containing protein
mm39_v1_chr1_+_42734889_42734937	0.323337	CACAGUG	ENSMUST00000054883.4|Pou3f3|ENSMUSG00000045515.5|POU domain, class 3, transcription factor 3
mm39_v1_chr4_+_106418224_106418235	0.313892	CACAGUG	ENSMUST00000047973.4|Dhcr24|ENSMUSG00000034926.4|24-dehydrocholesterol reductase
mm39_v1_chr6_+_4903299_4903347	0.313116	CACAGUG	ENSMUST00000035813.9|Ppp1r9a|ENSMUSG00000032827.16|protein phosphatase 1, regulatory subunit 9A
mm39_v1_chr2_+_32340459_32340474	0.313022	CACAGUG	ENSMUST00000048431.3|Naif1|ENSMUSG00000039164.3|nuclear apoptosis inducing factor 1
mm39_v1_chr12_+_111504450_111504633	0.312436	CACAGUG	ENSMUST00000166123.9|Eif5|ENSMUSG00000021282.18|eukaryotic translation initiation factor 5	ENSMUST00000222441.2|Eif5|ENSMUSG00000021282.18|eukaryotic translation initiation factor 5
mm39_v1_chr13_-_95386776_95386844	0.303874	CACAGUG	ENSMUST00000162153.9|Pde8b|ENSMUSG00000021684.18|phosphodiesterase 8B	ENSMUST00000160957.9|Pde8b|ENSMUSG00000021684.18|phosphodiesterase 8B	ENSMUST00000159598.2|Pde8b|ENSMUSG00000021684.18|phosphodiesterase 8B	ENSMUST00000162412.8|Pde8b|ENSMUSG00000021684.18|phosphodiesterase 8B
mm39_v1_chr10_-_128727542_128727587	0.301507	CACAGUG	ENSMUST00000026408.7|Gdf11|ENSMUSG00000025352.7|growth differentiation factor 11
mm39_v1_chr1_-_143652711_143652806	0.299795	CACAGUG	ENSMUST00000159879.2|Ro60|ENSMUSG00000018199.10|Ro60, Y RNA binding protein
mm39_v1_chr2_+_125514997_125515053	0.296843	CACAGUG	ENSMUST00000164756.4|Eid1|ENSMUSG00000091337.4|EP300 interacting inhibitor of differentiation 1
mm39_v1_chr2_-_20973692_20973768	0.293524	CACAGUG	ENSMUST00000114594.8|Arhgap21|ENSMUSG00000036591.17|Rho GTPase activating protein 21
mm39_v1_chr2_+_31462780_31462841	0.29111	CACAGUG	ENSMUST00000137889.7|Fubp3|ENSMUSG00000026843.16|far upstream element (FUSE) binding protein 3	ENSMUST00000194386.6|Fubp3|ENSMUSG00000026843.16|far upstream element (FUSE) binding protein 3	ENSMUST00000055244.13|Fubp3|ENSMUSG00000026843.16|far upstream element (FUSE) binding protein 3
mm39_v1_chr19_-_4993060_4993155	0.290928	CACAGUG	ENSMUST00000133504.2|Peli3|ENSMUSG00000024901.16|pellino 3	ENSMUST00000133254.2|Peli3|ENSMUSG00000024901.16|pellino 3	ENSMUST00000120475.8|Peli3|ENSMUSG00000024901.16|pellino 3	ENSMUST00000025834.15|Peli3|ENSMUSG00000024901.16|pellino 3
mm39_v1_chr10_-_105410280_105410313	0.28405	CACAGUG	ENSMUST00000061506.9|Tmtc2|ENSMUSG00000036019.9|transmembrane and tetratricopeptide repeat containing 2
mm39_v1_chr12_-_72117865_72117899	0.281783	CACAGUG	ENSMUST00000050649.6|Gpr135|ENSMUSG00000043398.6|G protein-coupled receptor 135
mm39_v1_chr4_-_154721288_154721330	0.276324	CACAGUG	ENSMUST00000030902.13|Prdm16|ENSMUSG00000039410.17|PR domain containing 16	ENSMUST00000105637.8|Prdm16|ENSMUSG00000039410.17|PR domain containing 16	ENSMUST00000070313.14|Prdm16|ENSMUSG00000039410.17|PR domain containing 16	ENSMUST00000105636.8|Prdm16|ENSMUSG00000039410.17|PR domain containing 16	ENSMUST00000105638.9|Prdm16|ENSMUSG00000039410.17|PR domain containing 16	ENSMUST00000097759.9|Prdm16|ENSMUSG00000039410.17|PR domain containing 16	ENSMUST00000124771.2|Prdm16|ENSMUSG00000039410.17|PR domain containing 16
mm39_v1_chr12_-_91556761_91556783	0.274232	CACAGUG	ENSMUST00000021345.14|Gtf2a1|ENSMUSG00000020962.15|general transcription factor II A, 1
mm39_v1_chr9_+_95441652_95441710	0.272342	CACAGUG	ENSMUST00000079597.7|Paqr9|ENSMUSG00000064225.7|progestin and adipoQ receptor family member IX
mm39_v1_chr5_+_30437579_30437678	0.269857	CACAGUG	ENSMUST00000145167.9|Selenoi|ENSMUSG00000075703.17|selenoprotein I
mm39_v1_chr2_+_14609063_14609117	0.265756	CACAGUG	ENSMUST00000114723.9|Cacnb2|ENSMUSG00000057914.16|calcium channel, voltage-dependent, beta 2 subunit
mm39_v1_chr10_+_92996686_92996756	0.265561	CACAGUG	ENSMUST00000069965.9|Cdk17|ENSMUSG00000020015.11|cyclin-dependent kinase 17
mm39_v1_chr3_-_104771716_104771821	0.263827	CACAGUG	ENSMUST00000195912.2|Capza1|ENSMUSG00000070372.12|capping protein (actin filament) muscle Z-line, alpha 1	ENSMUST00000094028.10|Capza1|ENSMUSG00000070372.12|capping protein (actin filament) muscle Z-line, alpha 1
mm39_v1_chr17_-_88105422_88105476	0.263608	CACAGUG	ENSMUST00000055221.9|Kcnk12|ENSMUSG00000050138.9|potassium channel, subfamily K, member 12
mm39_v1_chr19_+_26582450_26582519	0.263013	CACAGUG	ENSMUST00000176769.9|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000208163.2|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000025862.15|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000176030.8|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm39_v1_chr2_-_167503416_167503502	0.261682	CACAGUG	ENSMUST00000125544.3|Gm20431|ENSMUSG00000089739.3|predicted gene 20431	ENSMUST00000006587.7|Tmem189|ENSMUSG00000090213.2|transmembrane protein 189
mm39_v1_chr17_-_24360516_24360569	0.259628	CACAGUG	ENSMUST00000115411.8|Pdpk1|ENSMUSG00000024122.17|3-phosphoinositide dependent protein kinase 1	ENSMUST00000115409.9|Pdpk1|ENSMUSG00000024122.17|3-phosphoinositide dependent protein kinase 1	ENSMUST00000115407.9|Pdpk1|ENSMUSG00000024122.17|3-phosphoinositide dependent protein kinase 1	ENSMUST00000102927.10|Pdpk1|ENSMUSG00000024122.17|3-phosphoinositide dependent protein kinase 1
mm39_v1_chr6_-_38230890_38231089	0.258699	CACAGUG	ENSMUST00000117556.8|D630045J12Rik|ENSMUSG00000063455.17|RIKEN cDNA D630045J12 gene	ENSMUST00000169256.5|D630045J12Rik|ENSMUSG00000063455.17|RIKEN cDNA D630045J12 gene
mm39_v1_chr4_-_32923389_32923455	0.25614	CACAGUG	ENSMUST00000035719.11|Ankrd6|ENSMUSG00000040183.14|ankyrin repeat domain 6
mm39_v1_chr1_-_9770434_9770554	0.255783	CACAGUG	ENSMUST00000088658.11|Mybl1|ENSMUSG00000025912.17|myeloblastosis oncogene-like 1
mm39_v1_chr4_+_12089373_12089441	0.25267	CACAGUG	ENSMUST00000095143.9|Rbm12b2|ENSMUSG00000052137.12|RNA binding motif protein 12 B2	ENSMUST00000063839.6|Rbm12b2|ENSMUSG00000052137.12|RNA binding motif protein 12 B2
mm39_v1_chr2_+_48704121_48704187	0.248049	CACAGUG	ENSMUST00000063886.4|Acvr2a|ENSMUSG00000052155.6|activin receptor IIA
mm39_v1_chr11_+_105480796_105480857	0.247649	CACAGUG	ENSMUST00000168598.8|Tanc2|ENSMUSG00000053580.17|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	ENSMUST00000100330.10|Tanc2|ENSMUSG00000053580.17|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm39_v1_chr9_-_58943670_58943743	0.24726	CACAGUG	ENSMUST00000214547.2|Neo1|ENSMUSG00000032340.9|neogenin	ENSMUST00000068664.7|Neo1|ENSMUSG00000032340.9|neogenin
mm39_v1_chr2_+_129642371_129642493	0.244836	CACAGUG	ENSMUST00000165413.9|Stk35|ENSMUSG00000037885.19|serine/threonine kinase 35	ENSMUST00000166282.3|Stk35|ENSMUSG00000037885.19|serine/threonine kinase 35
mm39_v1_chr16_-_92622972_92623037	0.235341	CACAGUG	ENSMUST00000023673.14|Runx1|ENSMUSG00000022952.18|runt related transcription factor 1
mm39_v1_chr4_+_62883796_62883854	0.231214	CACAGUG	ENSMUST00000030043.13|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618	ENSMUST00000107415.8|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618	ENSMUST00000064814.6|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618
mm39_v1_chr18_-_6241470_6241550	0.229058	CACAGUG	ENSMUST00000163210.2|Kif5b|ENSMUSG00000006740.15|kinesin family member 5B	ENSMUST00000025083.14|Kif5b|ENSMUSG00000006740.15|kinesin family member 5B
mm39_v1_chr6_-_28421678_28421742	0.22895	CACAGUG	ENSMUST00000090511.4|Gcc1|ENSMUSG00000029708.10|golgi coiled coil 1
mm39_v1_chr6_+_66873381_66873533	0.228723	CACAGUG	ENSMUST00000043148.13|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000114228.8|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000114227.8|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000114226.8|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000204511.3|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000114225.8|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000114224.8|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000114222.4|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12
mm39_v1_chr8_-_96534085_96534099	0.220393	CACAGUG	ENSMUST00000098473.11|Cnot1|ENSMUSG00000036550.17|CCR4-NOT transcription complex, subunit 1	ENSMUST00000211887.2|Cnot1|ENSMUSG00000036550.17|CCR4-NOT transcription complex, subunit 1
mm39_v1_chr18_-_55123153_55123238	0.215695	CACAGUG	ENSMUST00000064763.7|Zfp608|ENSMUSG00000052713.10|zinc finger protein 608
mm39_v1_chr11_+_73158214_73158363	0.21493	CACAGUG	ENSMUST00000049676.3|Trpv3|ENSMUSG00000043029.3|transient receptor potential cation channel, subfamily V, member 3
mm39_v1_chr18_+_31892933_31893026	0.210739	CACAGUG	ENSMUST00000115808.4|Ammecr1l|ENSMUSG00000041915.10|AMME chromosomal region gene 1-like
mm39_v1_chr11_-_86884507_86884538	0.208083	CACAGUG	ENSMUST00000018571.5|Ypel2|ENSMUSG00000018427.9|yippee like 2
mm39_v1_chr2_+_151544086_151544231	0.205705	CACAGUG	ENSMUST00000109872.2|Tmem74b|ENSMUSG00000044364.6|transmembrane protein 74B
mm39_v1_chr19_+_53298906_53298983	0.203972	CACAGUG	ENSMUST00000003870.15|Mxi1|ENSMUSG00000025025.15|MAX interactor 1, dimerization protein
mm39_v1_chr9_+_55234197_55234263	0.203304	CACAGUG	ENSMUST00000085754.10|Tmem266|ENSMUSG00000032313.12|transmembrane protein 266	ENSMUST00000034862.5|Tmem266|ENSMUSG00000032313.12|transmembrane protein 266
mm39_v1_chr7_-_110443557_110443664	0.202986	CACAGUG	ENSMUST00000177462.8|Rnf141|ENSMUSG00000030788.17|ring finger protein 141	ENSMUST00000176716.3|Rnf141|ENSMUSG00000030788.17|ring finger protein 141	ENSMUST00000176746.8|Rnf141|ENSMUSG00000030788.17|ring finger protein 141	ENSMUST00000177236.8|Rnf141|ENSMUSG00000030788.17|ring finger protein 141
mm39_v1_chr11_+_29323618_29323777	0.201803	CACAGUG	ENSMUST00000040182.13|Ccdc88a|ENSMUSG00000032740.18|coiled coil domain containing 88A	ENSMUST00000109477.2|Ccdc88a|ENSMUSG00000032740.18|coiled coil domain containing 88A
mm39_v1_chr2_-_153083322_153083346	0.201764	CACAGUG	ENSMUST00000056924.14|Plagl2|ENSMUSG00000051413.18|pleiomorphic adenoma gene-like 2
mm39_v1_chr15_-_64184485_64184537	0.197288	CACAGUG	ENSMUST00000177083.8|Asap1|ENSMUSG00000022377.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain1	ENSMUST00000177371.8|Asap1|ENSMUSG00000022377.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain1
mm39_v1_chr2_+_18069375_18069516	0.192391	CACAGUG	ENSMUST00000114671.8|Mllt10|ENSMUSG00000026743.17|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10	ENSMUST00000114680.9|Mllt10|ENSMUSG00000026743.17|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
mm39_v1_chr2_-_5719302_5719349	0.190748	CACAGUG	ENSMUST00000044009.14|Camk1d|ENSMUSG00000039145.17|calcium/calmodulin-dependent protein kinase ID
mm39_v1_chr11_+_105927698_105927716	0.190077	CACAGUG	ENSMUST00000058438.9|Dcaf7|ENSMUSG00000049354.9|DDB1 and CUL4 associated factor 7
mm39_v1_chr11_+_90140294_90140312	0.187481	CACAGUG	ENSMUST00000004050.7|Mmd|ENSMUSG00000003948.18|monocyte to macrophage differentiation-associated
mm39_v1_chr13_-_34529157_34529257	0.186765	CACAGUG	ENSMUST00000040336.12|Slc22a23|ENSMUSG00000038267.16|solute carrier family 22, member 23
mm39_v1_chr12_+_55171254_55171254	0.186286	CACAGUG	ENSMUST00000177768.3|Fam177a|ENSMUSG00000095595.3|family with sequence similarity 177, member A
mm39_v1_chr11_+_87482971_87483055	0.183251	CACAGUG	ENSMUST00000103179.10|Mtmr4|ENSMUSG00000018401.18|myotubularin related protein 4	ENSMUST00000092802.12|Mtmr4|ENSMUSG00000018401.18|myotubularin related protein 4	ENSMUST00000146871.8|Mtmr4|ENSMUSG00000018401.18|myotubularin related protein 4
mm39_v1_chr12_+_55246377_55246377	0.182312	CACAGUG	ENSMUST00000177978.3|Fam177a2|ENSMUSG00000094103.3|family with sequence similarity 177 member A2
mm39_v1_chr3_-_153430741_153430816	0.180724	CACAGUG	ENSMUST00000064460.7|St6galnac3|ENSMUSG00000052544.10|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	ENSMUST00000200397.5|St6galnac3|ENSMUSG00000052544.10|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
mm39_v1_chr11_-_65679101_65679147	0.180638	CACAGUG	ENSMUST00000152096.8|Map2k4|ENSMUSG00000033352.12|mitogen-activated protein kinase kinase 4	ENSMUST00000046963.10|Map2k4|ENSMUSG00000033352.12|mitogen-activated protein kinase kinase 4
mm39_v1_chr1_-_58625431_58625482	0.179054	CACAGUG	ENSMUST00000161000.2|Fam126b|ENSMUSG00000038174.15|family with sequence similarity 126, member B	ENSMUST00000161600.8|Fam126b|ENSMUSG00000038174.15|family with sequence similarity 126, member B
mm39_v1_chr2_+_10377237_10377309	0.178329	CACAGUG	ENSMUST00000114864.9|Sfmbt2|ENSMUSG00000061186.16|Scm-like with four mbt domains 2	ENSMUST00000116594.9|Sfmbt2|ENSMUSG00000061186.16|Scm-like with four mbt domains 2	ENSMUST00000041105.7|Sfmbt2|ENSMUSG00000061186.16|Scm-like with four mbt domains 2
mm39_v1_chr10_-_78188153_78188294	0.177661	CACAGUG	ENSMUST00000001240.12|Agpat3|ENSMUSG00000001211.16|1-acylglycerol-3-phosphate O-acyltransferase 3
mm39_v1_chr15_+_100366886_100366954	0.176446	CACAGUG	ENSMUST00000037001.10|Letmd1|ENSMUSG00000037353.10|LETM1 domain containing 1	ENSMUST00000230294.2|Letmd1|ENSMUSG00000037353.10|LETM1 domain containing 1
mm39_v1_chr15_-_93493758_93493795	0.174533	CACAGUG	ENSMUST00000048982.11|Prickle1|ENSMUSG00000036158.13|prickle planar cell polarity protein 1
mm39_v1_chr5_-_73413888_73413979	0.174507	CACAGUG	ENSMUST00000101127.12|Fryl|ENSMUSG00000070733.14|FRY like transcription coactivator
mm39_v1_chr7_-_46658144_46658169	0.16233	CACAGUG	ENSMUST00000061639.10|Spty2d1|ENSMUSG00000049516.10|SPT2 chromatin protein domain containing 1
mm39_v1_chr7_+_135139542_135139560	0.160952	CACAGUG	ENSMUST00000073961.8|Ptpre|ENSMUSG00000041836.11|protein tyrosine phosphatase, receptor type, E
mm39_v1_chr4_+_126915104_126915133	0.159272	CACAGUG	ENSMUST00000030623.8|Sfpq|ENSMUSG00000028820.14|splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
mm39_v1_chr14_-_106134253_106134253	0.157176	CACAGUG	ENSMUST00000022709.6|Spry2|ENSMUSG00000022114.6|sprouty RTK signaling antagonist 2
mm39_v1_chr12_+_8997929_8997979	0.156453	CACAGUG	ENSMUST00000020899.5|Matn3|ENSMUSG00000020583.5|matrilin 3
mm39_v1_chr5_+_130248547_130248681	0.149099	CACAGUG	ENSMUST00000202305.4|Tmem248|ENSMUSG00000053094.16|transmembrane protein 248	ENSMUST00000065329.13|Tmem248|ENSMUSG00000053094.16|transmembrane protein 248	ENSMUST00000200802.4|Tmem248|ENSMUSG00000053094.16|transmembrane protein 248
mm39_v1_chr4_-_136563154_136563299	0.148801	CACAGUG	ENSMUST00000105846.9|Ephb2|ENSMUSG00000028664.15|Eph receptor B2	ENSMUST00000059287.14|Ephb2|ENSMUSG00000028664.15|Eph receptor B2	ENSMUST00000105845.9|Ephb2|ENSMUSG00000028664.15|Eph receptor B2
mm39_v1_chr5_+_122296322_122296419	0.148032	CACAGUG	ENSMUST00000102528.11|Ppp1cc|ENSMUSG00000004455.17|protein phosphatase 1 catalytic subunit gamma	ENSMUST00000086294.11|Ppp1cc|ENSMUSG00000004455.17|protein phosphatase 1 catalytic subunit gamma
mm39_v1_chr12_+_4183032_4183127	0.145821	CACAGUG	ENSMUST00000124505.8|Adcy3|ENSMUSG00000020654.16|adenylate cyclase 3
mm39_v1_chr15_+_65658874_65658939	0.14269	CACAGUG	ENSMUST00000015146.16|Efr3a|ENSMUSG00000015002.19|EFR3 homolog A	ENSMUST00000173858.8|Efr3a|ENSMUSG00000015002.19|EFR3 homolog A	ENSMUST00000172756.2|Efr3a|ENSMUSG00000015002.19|EFR3 homolog A	ENSMUST00000174856.7|Efr3a|ENSMUSG00000015002.19|EFR3 homolog A
mm39_v1_chr6_+_87019819_87019900	0.142079	CACAGUG	ENSMUST00000113657.8|Gfpt1|ENSMUSG00000029992.15|glutamine fructose-6-phosphate transaminase 1	ENSMUST00000113658.8|Gfpt1|ENSMUSG00000029992.15|glutamine fructose-6-phosphate transaminase 1	ENSMUST00000113655.8|Gfpt1|ENSMUSG00000029992.15|glutamine fructose-6-phosphate transaminase 1	ENSMUST00000032057.8|Gfpt1|ENSMUSG00000029992.15|glutamine fructose-6-phosphate transaminase 1
mm39_v1_chr3_+_145643760_145643812	0.14121	CACAGUG	ENSMUST00000039571.14|2410004B18Rik|ENSMUSG00000036873.14|RIKEN cDNA 2410004B18 gene
mm39_v1_chr19_-_18978463_18978483	0.140532	CACAGUG	ENSMUST00000040153.15|Rorb|ENSMUSG00000036192.16|RAR-related orphan receptor beta	ENSMUST00000112828.8|Rorb|ENSMUSG00000036192.16|RAR-related orphan receptor beta
mm39_v1_chr7_-_26928029_26928061	0.138175	CACAGUG	ENSMUST00000003850.8|Itpkc|ENSMUSG00000003752.10|inositol 1,4,5-trisphosphate 3-kinase C
mm39_v1_chr5_-_22755274_22755384	0.135278	CACAGUG	ENSMUST00000030872.12|Orc5|ENSMUSG00000029012.12|origin recognition complex, subunit 5
mm39_v1_chr4_+_63133639_63133672	0.133368	CACAGUG	ENSMUST00000036300.13|Col27a1|ENSMUSG00000045672.16|collagen, type XXVII, alpha 1
mm39_v1_chr9_+_56902172_56902207	0.132765	CACAGUG	ENSMUST00000034832.8|Ptpn9|ENSMUSG00000032290.8|protein tyrosine phosphatase, non-receptor type 9
mm39_v1_chr18_-_21433186_21433226	0.131155	CACAGUG	ENSMUST00000049260.7|Garem1|ENSMUSG00000042680.9|GRB2 associated regulator of MAPK1 subtype 1
mm39_v1_chr4_+_33310306_33310374	0.129424	CACAGUG	ENSMUST00000108153.9|Rngtt|ENSMUSG00000028274.18|RNA guanylyltransferase and 5'-phosphatase	ENSMUST00000029942.8|Rngtt|ENSMUSG00000028274.18|RNA guanylyltransferase and 5'-phosphatase
mm39_v1_chr17_-_80787398_80787398	0.127521	CACAGUG	ENSMUST00000068714.7|Sos1|ENSMUSG00000024241.8|SOS Ras/Rac guanine nucleotide exchange factor 1
mm39_v1_chr11_-_95478517_95478561	0.124956	CACAGUG	ENSMUST00000000122.7|Ngfr|ENSMUSG00000000120.7|nerve growth factor receptor (TNFR superfamily, member 16)
mm39_v1_chr7_-_128063354_128063397	0.124723	CACAGUG	ENSMUST00000106226.9|Tial1|ENSMUSG00000030846.16|Tia1 cytotoxic granule-associated RNA binding protein-like 1	ENSMUST00000106228.8|Tial1|ENSMUSG00000030846.16|Tia1 cytotoxic granule-associated RNA binding protein-like 1
mm39_v1_chr1_+_127701901_127701975	0.121779	CACAGUG	ENSMUST00000112570.2|Ccnt2|ENSMUSG00000026349.15|cyclin T2	ENSMUST00000027587.15|Ccnt2|ENSMUSG00000026349.15|cyclin T2
mm39_v1_chr5_+_54155814_54155841	0.121056	CACAGUG	ENSMUST00000117661.9|Stim2|ENSMUSG00000039156.20|stromal interaction molecule 2
mm39_v1_chr11_-_87878301_87878364	0.119891	CACAGUG	ENSMUST00000020775.9|Dynll2|ENSMUSG00000020483.15|dynein light chain LC8-type 2
mm39_v1_chr1_+_64571942_64572013	0.116484	CACAGUG	ENSMUST00000171164.8|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1	ENSMUST00000187811.7|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1	ENSMUST00000049932.12|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1	ENSMUST00000087366.11|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1
mm39_v1_chr4_+_59189239_59189257	0.112716	CACAGUG	ENSMUST00000030074.8|Ugcg|ENSMUSG00000028381.9|UDP-glucose ceramide glucosyltransferase
mm39_v1_chr1_-_136888118_136888234	0.108773	CACAGUG	ENSMUST00000192357.6|Nr5a2|ENSMUSG00000026398.15|nuclear receptor subfamily 5, group A, member 2	ENSMUST00000027649.14|Nr5a2|ENSMUSG00000026398.15|nuclear receptor subfamily 5, group A, member 2
mm39_v1_chr1_+_89382491_89382643	0.107885	CACAGUG	ENSMUST00000027521.15|Agap1|ENSMUSG00000055013.17|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	ENSMUST00000190096.7|Agap1|ENSMUSG00000055013.17|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm39_v1_chr17_+_87415049_87415129	0.106704	CACAGUG	ENSMUST00000041369.8|Socs5|ENSMUSG00000037104.10|suppressor of cytokine signaling 5	ENSMUST00000234803.2|Socs5|ENSMUSG00000037104.10|suppressor of cytokine signaling 5
mm39_v1_chr18_-_38345010_38345106	0.106581	CACAGUG	ENSMUST00000159405.3|Pcdh1|ENSMUSG00000051375.16|protocadherin 1	ENSMUST00000160721.8|Pcdh1|ENSMUSG00000051375.16|protocadherin 1
mm39_v1_chr9_-_75316625_75316668	0.102985	CACAGUG	ENSMUST00000168937.8|Mapk6|ENSMUSG00000042688.17|mitogen-activated protein kinase 6
mm39_v1_chr6_-_116170389_116170462	0.102079	CACAGUG	ENSMUST00000088896.10|Tmcc1|ENSMUSG00000030126.18|transmembrane and coiled coil domains 1
mm39_v1_chr9_+_94551929_94551984	0.100771	CACAGUG	ENSMUST00000033463.10|Slc9a9|ENSMUSG00000031129.10|solute carrier family 9 (sodium/hydrogen exchanger), member 9
mm39_v1_chr15_+_12205095_12205124	0.0997217	CACAGUG	ENSMUST00000038172.16|Mtmr12|ENSMUSG00000039458.16|myotubularin related protein 12
mm39_v1_chr11_+_69792642_69792720	0.0977007	CACAGUG	ENSMUST00000177138.8|Neurl4|ENSMUSG00000047284.15|neuralized E3 ubiquitin protein ligase 4	ENSMUST00000108617.10|Neurl4|ENSMUSG00000047284.15|neuralized E3 ubiquitin protein ligase 4	ENSMUST00000177476.8|Neurl4|ENSMUSG00000047284.15|neuralized E3 ubiquitin protein ligase 4	ENSMUST00000061837.11|Neurl4|ENSMUSG00000047284.15|neuralized E3 ubiquitin protein ligase 4
mm39_v1_chr11_+_11064125_11064223	0.0937327	CACAGUG	ENSMUST00000109681.8|Vwc2|ENSMUSG00000050830.18|von Willebrand factor C domain containing 2
mm39_v1_chr17_+_29768757_29768773	0.0936233	CACAGUG	ENSMUST00000048677.9|Tbc1d22b|ENSMUSG00000042203.9|TBC1 domain family, member 22B	ENSMUST00000150388.3|Gm28052|ENSMUSG00000099329.3|predicted gene, 28052
mm39_v1_chr10_+_80591030_80591073	0.0928336	CACAGUG	ENSMUST00000105336.9|Dot1l|ENSMUSG00000061589.15|DOT1-like, histone H3 methyltransferase (S. cerevisiae)
mm39_v1_chr11_-_82781369_82781452	0.0885495	CACAGUG	ENSMUST00000092844.13|Rad51d|ENSMUSG00000018841.18|RAD51 paralog D	ENSMUST00000021033.16|Rad51d|ENSMUSG00000018841.18|RAD51 paralog D	ENSMUST00000018985.15|Rad51d|ENSMUSG00000018841.18|RAD51 paralog D
mm39_v1_chr7_-_46360066_46360121	0.0792164	CACAGUG	ENSMUST00000143082.4|Saal1|ENSMUSG00000006763.15|serum amyloid A-like 1
mm39_v1_chr11_-_95956176_95956214	0.0748099	CACAGUG	ENSMUST00000100528.5|Ube2z|ENSMUSG00000014349.8|ubiquitin-conjugating enzyme E2Z
mm39_v1_chr11_-_115590318_115590360	0.0747896	CACAGUG	ENSMUST00000106497.8|Grb2|ENSMUSG00000059923.14|growth factor receptor bound protein 2
mm39_v1_chr2_+_106523532_106523624	0.0726977	CACAGUG	ENSMUST00000111063.8|Mpped2|ENSMUSG00000016386.16|metallophosphoesterase domain containing 2
mm39_v1_chr3_+_87524848_87524920	0.0703194	CACAGUG	ENSMUST00000039476.15|Arhgef11|ENSMUSG00000041977.19|Rho guanine nucleotide exchange factor (GEF) 11	ENSMUST00000129113.8|Arhgef11|ENSMUSG00000041977.19|Rho guanine nucleotide exchange factor (GEF) 11
mm39_v1_chr15_-_79571977_79572120	0.0698033	CACAGUG	ENSMUST00000023061.7|Josd1|ENSMUSG00000022426.7|Josephin domain containing 1
mm39_v1_chr18_+_23885390_23885458	0.0697985	CACAGUG	ENSMUST00000170802.8|Mapre2|ENSMUSG00000024277.15|microtubule-associated protein, RP/EB family, member 2	ENSMUST00000155708.8|Mapre2|ENSMUSG00000024277.15|microtubule-associated protein, RP/EB family, member 2	ENSMUST00000118826.9|Mapre2|ENSMUSG00000024277.15|microtubule-associated protein, RP/EB family, member 2
mm39_v1_chr6_+_108760025_108760096	0.0697851	CACAGUG	ENSMUST00000032196.9|Arl8b|ENSMUSG00000030105.9|ADP-ribosylation factor-like 8B
mm39_v1_chr19_+_10160249_10160260	0.068073	CACAGUG	ENSMUST00000010807.6|Fads1|ENSMUSG00000010663.6|fatty acid desaturase 1
mm39_v1_chr1_-_160040286_160040445	0.0666435	CACAGUG	ENSMUST00000195654.2|Cacybp|ENSMUSG00000014226.11|calcyclin binding protein	ENSMUST00000014370.11|Cacybp|ENSMUSG00000014226.11|calcyclin binding protein
mm39_v1_chr11_+_98798627_98798692	0.0640918	CACAGUG	ENSMUST00000092706.13|Cdc6|ENSMUSG00000017499.16|cell division cycle 6
mm39_v1_chrX_-_100266032_100266169	0.0636299	CACAGUG	ENSMUST00000120389.8|Snx12|ENSMUSG00000046032.17|sorting nexin 12	ENSMUST00000156473.8|Snx12|ENSMUSG00000046032.17|sorting nexin 12	ENSMUST00000077876.4|Snx12|ENSMUSG00000046032.17|sorting nexin 12
mm39_v1_chr16_+_17269845_17269903	0.0615976	CACAGUG	ENSMUST00000006293.5|Crkl|ENSMUSG00000006134.5|v-crk avian sarcoma virus CT10 oncogene homolog-like	ENSMUST00000231228.2|Crkl|ENSMUSG00000006134.5|v-crk avian sarcoma virus CT10 oncogene homolog-like
mm39_v1_chr15_+_96185399_96185487	0.0607845	CACAGUG	ENSMUST00000134985.9|Arid2|ENSMUSG00000033237.20|AT rich interactive domain 2 (ARID, RFX-like)	ENSMUST00000096250.5|Arid2|ENSMUSG00000033237.20|AT rich interactive domain 2 (ARID, RFX-like)
mm39_v1_chr11_-_113574981_113575013	0.0591499	CACAGUG	ENSMUST00000120194.2|Fam104a|ENSMUSG00000041629.8|family with sequence similarity 104, member A
mm39_v1_chr4_+_12140263_12140317	0.0590473	CACAGUG	ENSMUST00000050069.9|Rbm12b1|ENSMUSG00000046667.15|RNA binding motif protein 12 B1	ENSMUST00000069128.8|Rbm12b1|ENSMUSG00000046667.15|RNA binding motif protein 12 B1
mm39_v1_chr2_+_118731860_118731969	0.0580877	CACAGUG	ENSMUST00000036578.7|Bahd1|ENSMUSG00000040007.9|bromo adjacent homology domain containing 1
mm39_v1_chr4_-_133746138_133746152	0.0479055	CACAGUG	ENSMUST00000051674.3|Lin28a|ENSMUSG00000050966.10|lin-28 homolog A (C. elegans)
mm39_v1_chr17_+_29879569_29879680	0.0447165	CACAGUG	ENSMUST00000024816.13|Cmtr1|ENSMUSG00000024019.19|cap methyltransferase 1	ENSMUST00000235031.2|Cmtr1|ENSMUSG00000024019.19|cap methyltransferase 1	ENSMUST00000234911.2|Cmtr1|ENSMUSG00000024019.19|cap methyltransferase 1
mm39_v1_chr1_-_132953068_132953154	0.0436999	CACAGUG	ENSMUST00000186617.7|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4	ENSMUST00000067429.10|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4	ENSMUST00000067398.13|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4	ENSMUST00000188090.7|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4
mm39_v1_chr5_-_51711237_51711264	0.041571	CACAGUG	ENSMUST00000132734.8|Ppargc1a|ENSMUSG00000029167.14|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm39_v1_chr5_+_118698689_118698804	0.0411614	CACAGUG	ENSMUST00000100816.8|Med13l|ENSMUSG00000018076.13|mediator complex subunit 13-like	ENSMUST00000201010.2|Med13l|ENSMUSG00000018076.13|mediator complex subunit 13-like
mm39_v1_chr19_+_6291698_6291764	0.0388847	CACAGUG	ENSMUST00000045351.13|Atg2a|ENSMUSG00000024773.16|autophagy related 2A
mm39_v1_chr2_+_156038562_156038695	0.0386039	CACAGUG	ENSMUST00000037401.10|Phf20|ENSMUSG00000038116.17|PHD finger protein 20
mm39_v1_chr12_-_27392356_27392573	0.0381887	CACAGUG	ENSMUST00000079063.7|Sox11|ENSMUSG00000063632.7|SRY (sex determining region Y)-box 11
mm39_v1_chr15_-_10713621_10713632	0.0364045	CACAGUG	ENSMUST00000090339.11|Rai14|ENSMUSG00000022246.15|retinoic acid induced 14
mm39_v1_chr2_-_102016717_102016735	0.0346945	CACAGUG	ENSMUST00000058790.12|Ldlrad3|ENSMUSG00000048058.18|low density lipoprotein receptor class A domain containing 3
mm39_v1_chr16_-_46317318_46317349	0.031042	CACAGUG	ENSMUST00000023335.13|Nectin3|ENSMUSG00000022656.16|nectin cell adhesion molecule 3	ENSMUST00000023334.15|Nectin3|ENSMUSG00000022656.16|nectin cell adhesion molecule 3
mm39_v1_chrX_+_52001108_52001238	0.0285547	CACAGUG	ENSMUST00000078944.13|Phf6|ENSMUSG00000025626.17|PHD finger protein 6	ENSMUST00000101587.10|Phf6|ENSMUSG00000025626.17|PHD finger protein 6	ENSMUST00000154864.4|Phf6|ENSMUSG00000025626.17|PHD finger protein 6
mm39_v1_chr5_+_124939739_124939836	0.0270151	CACAGUG	ENSMUST00000111417.9|Zfp664|ENSMUSG00000079215.9|zinc finger protein 664
mm39_v1_chr6_-_28261881_28261942	0.025872	CACAGUG	ENSMUST00000115320.8|Zfp800|ENSMUSG00000039841.15|zinc finger protein 800	ENSMUST00000123098.8|Zfp800|ENSMUSG00000039841.15|zinc finger protein 800	ENSMUST00000115321.9|Zfp800|ENSMUSG00000039841.15|zinc finger protein 800	ENSMUST00000155494.2|Zfp800|ENSMUSG00000039841.15|zinc finger protein 800
mm39_v1_chr2_-_34645241_34645268	0.0246083	CACAGUG	ENSMUST00000102800.9|Gapvd1|ENSMUSG00000026867.20|GTPase activating protein and VPS9 domains 1
mm39_v1_chr11_+_72938609_72938728	0.0238635	CACAGUG	ENSMUST00000021135.5|Ncbp3|ENSMUSG00000020783.15|nuclear cap binding subunit 3
mm39_v1_chr1_-_131455039_131455123	0.0228847	CACAGUG	ENSMUST00000097588.9|Srgap2|ENSMUSG00000026425.16|SLIT-ROBO Rho GTPase activating protein 2	ENSMUST00000186543.7|Srgap2|ENSMUSG00000026425.16|SLIT-ROBO Rho GTPase activating protein 2
mm39_v1_chr15_+_82012114_82012155	0.0208856	CACAGUG	ENSMUST00000089174.6|Ccdc134|ENSMUSG00000068114.8|coiled-coil domain containing 134
mm39_v1_chr10_-_67120959_67121093	0.0190074	CACAGUG	ENSMUST00000159002.2|Nrbf2|ENSMUSG00000075000.12|nuclear receptor binding factor 2	ENSMUST00000077839.13|Nrbf2|ENSMUSG00000075000.12|nuclear receptor binding factor 2
mm39_v1_chr4_+_108691798_108691814	0.0187482	CACAGUG	ENSMUST00000030296.9|Txndc12|ENSMUSG00000028567.9|thioredoxin domain containing 12 (endoplasmic reticulum)
mm39_v1_chr11_-_50216426_50216500	0.0163353	CACAGUG	ENSMUST00000179865.8|Canx|ENSMUSG00000020368.16|calnexin	ENSMUST00000020637.9|Canx|ENSMUSG00000020368.16|calnexin
mm39_v1_chr17_+_25407352_25407392	0.0149738	CACAGUG	ENSMUST00000039734.12|Unkl|ENSMUSG00000015127.15|unkempt family like zinc finger
mm39_v1_chr2_-_103133524_103133623	0.0149294	CACAGUG	ENSMUST00000090475.10|Ehf|ENSMUSG00000012350.16|ets homologous factor
mm39_v1_chr17_+_26934617_26934698	0.0126115	CACAGUG	ENSMUST00000062519.14|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor	ENSMUST00000144221.2|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor	ENSMUST00000142539.8|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor	ENSMUST00000151681.2|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor
mm39_v1_chr4_+_139302009_139302036	0.0111799	CACAGUG	ENSMUST00000174078.2|Iffo2|ENSMUSG00000041025.16|intermediate filament family orphan 2
mm39_v1_chr13_+_14238361_14238407	0.0101568	CACAGUG	ENSMUST00000129488.8|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000110536.8|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000110534.8|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000039538.15|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000110533.2|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)
mm39_v1_chr1_-_165762469_165762605	0.00797097	CACAGUG	ENSMUST00000069609.12|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000111427.9|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000111426.11|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1
mm39_v1_chr4_-_133066549_133066582	0.00754611	CACAGUG	ENSMUST00000105906.2|Wdtc1|ENSMUSG00000037622.15|WD and tetratricopeptide repeats 1
mm39_v1_chr16_+_37688744_37688844	0.0070573	CACAGUG	ENSMUST00000078717.7|Lrrc58|ENSMUSG00000034158.10|leucine rich repeat containing 58
mm39_v1_chr5_+_36050663_36050817	0.00697823	CACAGUG	ENSMUST00000064571.11|Afap1|ENSMUSG00000029094.13|actin filament associated protein 1
mm39_v1_chr7_+_126376099_126376256	0.00625308	CACAGUG	ENSMUST00000038614.12|Ypel3|ENSMUSG00000042675.16|yippee like 3	ENSMUST00000170882.8|Ypel3|ENSMUSG00000042675.16|yippee like 3	ENSMUST00000106359.2|Ypel3|ENSMUSG00000042675.16|yippee like 3	ENSMUST00000106357.8|Ypel3|ENSMUSG00000042675.16|yippee like 3	ENSMUST00000145762.8|Ypel3|ENSMUSG00000042675.16|yippee like 3
mm39_v1_chr12_-_108241392_108241476	0.00614044	CACAGUG	ENSMUST00000136175.3|Ccdc85c|ENSMUSG00000084883.3|coiled-coil domain containing 85C
mm39_v1_chr16_+_29398149_29398160	0.000838227	CACAGUG	ENSMUST00000160597.8|Opa1|ENSMUSG00000038084.17|OPA1, mitochondrial dynamin like GTPase
mm39_v1_chr16_-_20245138_20245149	0.000450698	CACAGUG	ENSMUST00000079158.13|Abcc5|ENSMUSG00000022822.17|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
