mm39_v1_chr7_-_19504446_19504472	9.35878	CCAGUGU	ENSMUST00000003061.14|Bcam|ENSMUSG00000002980.15|basal cell adhesion molecule
mm39_v1_chr6_-_31540913_31540924	8.2836	CCAGUGU	ENSMUST00000026698.8|Podxl|ENSMUSG00000025608.10|podocalyxin-like
mm39_v1_chr7_+_89053562_89053609	7.26623	CCAGUGU	ENSMUST00000058755.5|Fzd4|ENSMUSG00000049791.5|frizzled class receptor 4
mm39_v1_chr16_-_4950285_4950347	6.16563	CCAGUGU	ENSMUST00000035672.5|Ppl|ENSMUSG00000039457.5|periplakin
mm39_v1_chr6_+_135042649_135042680	5.73606	CCAGUGU	ENSMUST00000050104.8|Gprc5a|ENSMUSG00000046733.8|G protein-coupled receptor, family C, group 5, member A
mm39_v1_chr15_-_85918378_85918413	5.27846	CCAGUGU	ENSMUST00000016172.10|Celsr1|ENSMUSG00000016028.12|cadherin, EGF LAG seven-pass G-type receptor 1
mm39_v1_chr17_-_46342739_46342789	4.74758	CCAGUGU	ENSMUST00000024747.14|Vegfa|ENSMUSG00000023951.19|vascular endothelial growth factor A
mm39_v1_chr10_-_70995485_70995537	4.64148	CCAGUGU	ENSMUST00000014473.6|Bicc1|ENSMUSG00000014329.15|BicC family RNA binding protein 1	ENSMUST00000143791.8|Bicc1|ENSMUSG00000014329.15|BicC family RNA binding protein 1
mm39_v1_chr2_-_12306722_12306734	4.55916	CCAGUGU	ENSMUST00000028106.11|Itga8|ENSMUSG00000026768.11|integrin alpha 8
mm39_v1_chr11_+_63022328_63022338	4.4428	CCAGUGU	ENSMUST00000018361.10|Pmp22|ENSMUSG00000018217.13|peripheral myelin protein 22
mm39_v1_chr15_-_55770312_55770353	4.19104	CCAGUGU	ENSMUST00000039769.13|Sntb1|ENSMUSG00000060429.13|syntrophin, basic 1
mm39_v1_chr15_+_38869415_38869443	3.87172	CCAGUGU	ENSMUST00000179165.9|Fzd6|ENSMUSG00000022297.16|frizzled class receptor 6
mm39_v1_chr4_+_137589548_137589559	3.73118	CCAGUGU	ENSMUST00000102518.10|Ece1|ENSMUSG00000057530.15|endothelin converting enzyme 1
mm39_v1_chr8_+_27575611_27575626	3.45914	CCAGUGU	ENSMUST00000178514.8|Adgra2|ENSMUSG00000031486.16|adhesion G protein-coupled receptor A2	ENSMUST00000033876.14|Adgra2|ENSMUSG00000031486.16|adhesion G protein-coupled receptor A2
mm39_v1_chr16_+_42727926_42728047	3.41355	CCAGUGU	ENSMUST00000151244.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20	ENSMUST00000114694.9|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chr11_-_59181573_59181584	3.39946	CCAGUGU	ENSMUST00000010044.8|Wnt3a|ENSMUSG00000009900.8|wingless-type MMTV integration site family, member 3A
mm39_v1_chr1_-_150868802_150868906	3.34917	CCAGUGU	ENSMUST00000074783.12|Hmcn1|ENSMUSG00000066842.19|hemicentin 1	ENSMUST00000137197.9|Hmcn1|ENSMUSG00000066842.19|hemicentin 1
mm39_v1_chr13_-_25015392_25015500	3.14865	CCAGUGU	ENSMUST00000006900.7|Acot13|ENSMUSG00000006717.8|acyl-CoA thioesterase 13
mm39_v1_chr11_-_11987391_11987407	3.05216	CCAGUGU	ENSMUST00000093321.12|Grb10|ENSMUSG00000020176.18|growth factor receptor bound protein 10
mm39_v1_chr11_+_75541324_75541370	3.04794	CCAGUGU	ENSMUST00000102505.10|Myo1c|ENSMUSG00000017774.20|myosin IC
mm39_v1_chr3_+_121746862_121746943	2.98938	CCAGUGU	ENSMUST00000037958.14|Arhgap29|ENSMUSG00000039831.17|Rho GTPase activating protein 29	ENSMUST00000196904.5|Arhgap29|ENSMUSG00000039831.17|Rho GTPase activating protein 29
mm39_v1_chr12_+_9624437_9624448	2.94973	CCAGUGU	ENSMUST00000057021.9|Osr1|ENSMUSG00000048387.9|odd-skipped related transcription factor 1
mm39_v1_chr6_+_17307639_17307730	2.94124	CCAGUGU	ENSMUST00000115453.2|Cav1|ENSMUSG00000007655.17|caveolin 1, caveolae protein
mm39_v1_chr9_+_43655230_43655318	2.38294	CCAGUGU	ENSMUST00000034510.9|Nectin1|ENSMUSG00000032012.10|nectin cell adhesion molecule 1
mm39_v1_chr12_+_78795763_78795793	2.38126	CCAGUGU	ENSMUST00000082024.7|Mpp5|ENSMUSG00000021112.10|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm39_v1_chr9_-_20726344_20726365	2.36983	CCAGUGU	ENSMUST00000004201.8|Col5a3|ENSMUSG00000004098.8|collagen, type V, alpha 3
mm39_v1_chr4_-_138820269_138820304	2.3186	CCAGUGU	ENSMUST00000042844.7|Nbl1|ENSMUSG00000041120.7|NBL1, DAN family BMP antagonist
mm39_v1_chr11_-_120551426_120551438	2.2988	CCAGUGU	ENSMUST00000106177.8|Notum|ENSMUSG00000042988.11|notum palmitoleoyl-protein carboxylesterase
mm39_v1_chr8_-_37081091_37081102	2.28268	CCAGUGU	ENSMUST00000033923.14|Dlc1|ENSMUSG00000031523.17|deleted in liver cancer 1
mm39_v1_chr19_-_47452840_47452894	2.17149	CCAGUGU	ENSMUST00000081619.10|Sh3pxd2a|ENSMUSG00000053617.13|SH3 and PX domains 2A
mm39_v1_chr2_-_140513382_140513399	2.03629	CCAGUGU	ENSMUST00000110057.3|Flrt3|ENSMUSG00000051379.13|fibronectin leucine rich transmembrane protein 3
mm39_v1_chr1_-_93406515_93406544	1.99387	CCAGUGU	ENSMUST00000170883.8|Hdlbp|ENSMUSG00000034088.16|high density lipoprotein (HDL) binding protein	ENSMUST00000189025.7|Hdlbp|ENSMUSG00000034088.16|high density lipoprotein (HDL) binding protein
mm39_v1_chr1_-_186438177_186438196	1.97462	CCAGUGU	ENSMUST00000045288.14|Tgfb2|ENSMUSG00000039239.15|transforming growth factor, beta 2
mm39_v1_chr7_-_16348862_16348946	1.84037	CCAGUGU	ENSMUST00000171937.2|Arhgap35|ENSMUSG00000058230.13|Rho GTPase activating protein 35	ENSMUST00000075845.11|Arhgap35|ENSMUSG00000058230.13|Rho GTPase activating protein 35
mm39_v1_chr16_+_95502911_95502960	1.82003	CCAGUGU	ENSMUST00000023612.17|Ets2|ENSMUSG00000022895.17|E26 avian leukemia oncogene 2, 3' domain
mm39_v1_chr2_+_34661982_34662113	1.81399	CCAGUGU	ENSMUST00000028222.13|Hspa5|ENSMUSG00000026864.14|heat shock protein 5	ENSMUST00000100171.3|Hspa5|ENSMUSG00000026864.14|heat shock protein 5
mm39_v1_chr10_-_121312212_121312252	1.80303	CCAGUGU	ENSMUST00000026902.9|Rassf3|ENSMUSG00000025795.9|Ras association (RalGDS/AF-6) domain family member 3
mm39_v1_chr11_-_116089866_116089916	1.79268	CCAGUGU	ENSMUST00000066587.12|Acox1|ENSMUSG00000020777.17|acyl-Coenzyme A oxidase 1, palmitoyl
mm39_v1_chr5_+_16758777_16758795	1.67	CCAGUGU	ENSMUST00000030683.8|Hgf|ENSMUSG00000028864.8|hepatocyte growth factor
mm39_v1_chr5_-_137101108_137101131	1.6603	CCAGUGU	ENSMUST00000077523.4|Serpine1|ENSMUSG00000037411.11|serine (or cysteine) peptidase inhibitor, clade E, member 1	ENSMUST00000041388.11|Serpine1|ENSMUSG00000037411.11|serine (or cysteine) peptidase inhibitor, clade E, member 1
mm39_v1_chr6_+_43242516_43242643	1.64262	CCAGUGU	ENSMUST00000031750.14|Arhgef5|ENSMUSG00000033542.14|Rho guanine nucleotide exchange factor (GEF) 5
mm39_v1_chr13_-_29137673_29137696	1.61476	CCAGUGU	ENSMUST00000067230.6|Sox4|ENSMUSG00000076431.5|SRY (sex determining region Y)-box 4
mm39_v1_chr19_-_41252370_41252447	1.59908	CCAGUGU	ENSMUST00000237871.2|Tm9sf3|ENSMUSG00000025016.12|transmembrane 9 superfamily member 3	ENSMUST00000025989.10|Tm9sf3|ENSMUSG00000025016.12|transmembrane 9 superfamily member 3
mm39_v1_chr10_-_88192852_88192969	1.58705	CCAGUGU	ENSMUST00000020249.2|Dram1|ENSMUSG00000020057.3|DNA-damage regulated autophagy modulator 1
mm39_v1_chr8_+_36054919_36054981	1.5763	CCAGUGU	ENSMUST00000037666.6|Mfhas1|ENSMUSG00000070056.7|malignant fibrous histiocytoma amplified sequence 1
mm39_v1_chr17_+_78507669_78507687	1.5743	CCAGUGU	ENSMUST00000112498.3|Crim1|ENSMUSG00000024074.9|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm39_v1_chr13_+_41013230_41013299	1.56639	CCAGUGU	ENSMUST00000110191.10|Gcnt2|ENSMUSG00000021360.17|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm39_v1_chr12_-_69728572_69728632	1.55973	CCAGUGU	ENSMUST00000183277.8|Sos2|ENSMUSG00000034801.14|SOS Ras/Rho guanine nucleotide exchange factor 2	ENSMUST00000035773.14|Sos2|ENSMUSG00000034801.14|SOS Ras/Rho guanine nucleotide exchange factor 2
mm39_v1_chr17_-_45997132_45997194	1.55135	CCAGUGU	ENSMUST00000113523.9|Tmem63b|ENSMUSG00000036026.16|transmembrane protein 63b
mm39_v1_chr2_-_93164812_93164869	1.53282	CCAGUGU	ENSMUST00000111265.9|Tspan18|ENSMUSG00000027217.14|tetraspanin 18
mm39_v1_chr7_-_83801073_83801152	1.51714	CCAGUGU	ENSMUST00000117085.2|Abhd17c|ENSMUSG00000038459.11|abhydrolase domain containing 17C
mm39_v1_chr19_+_41471067_41471128	1.49477	CCAGUGU	ENSMUST00000067795.13|Lcor|ENSMUSG00000025019.18|ligand dependent nuclear receptor corepressor
mm39_v1_chr10_+_43354807_43354859	1.48058	CCAGUGU	ENSMUST00000167488.9|Bend3|ENSMUSG00000038214.16|BEN domain containing 3
mm39_v1_chr1_+_194302123_194302141	1.47513	CCAGUGU	ENSMUST00000027952.12|Plxna2|ENSMUSG00000026640.13|plexin A2
mm39_v1_chr5_-_24745436_24745590	1.46236	CCAGUGU	ENSMUST00000048302.13|Asb10|ENSMUSG00000038204.14|ankyrin repeat and SOCS box-containing 10	ENSMUST00000119657.2|Asb10|ENSMUSG00000038204.14|ankyrin repeat and SOCS box-containing 10
mm39_v1_chr2_-_132722767_132722829	1.40913	CCAGUGU	ENSMUST00000049787.3|Lrrn4|ENSMUSG00000043110.3|leucine rich repeat neuronal 4
mm39_v1_chr15_+_78993111_78993186	1.40295	CCAGUGU	ENSMUST00000040320.10|Micall1|ENSMUSG00000033039.11|microtubule associated monooxygenase, calponin and LIM domain containing -like 1
mm39_v1_chr5_-_51711237_51711264	1.38361	CCAGUGU	ENSMUST00000132734.8|Ppargc1a|ENSMUSG00000029167.14|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm39_v1_chrX_-_7607527_7607580	1.38046	CCAGUGU	ENSMUST00000033490.13|Ccdc120|ENSMUSG00000031150.14|coiled-coil domain containing 120
mm39_v1_chr11_-_90281721_90281753	1.32192	CCAGUGU	ENSMUST00000004051.8|Hlf|ENSMUSG00000003949.17|hepatic leukemia factor
mm39_v1_chr5_-_123822351_123822442	1.29918	CCAGUGU	ENSMUST00000111564.8|Clip1|ENSMUSG00000049550.18|CAP-GLY domain containing linker protein 1	ENSMUST00000063905.12|Clip1|ENSMUSG00000049550.18|CAP-GLY domain containing linker protein 1
mm39_v1_chr7_-_19483389_19483498	1.2462	CCAGUGU	ENSMUST00000108450.5|Nectin2|ENSMUSG00000062300.15|nectin cell adhesion molecule 2	ENSMUST00000075447.14|Nectin2|ENSMUSG00000062300.15|nectin cell adhesion molecule 2
mm39_v1_chr19_-_10217968_10218125	1.23308	CCAGUGU	ENSMUST00000189897.2|Myrf|ENSMUSG00000036098.16|myelin regulatory factor	ENSMUST00000186056.7|Myrf|ENSMUSG00000036098.16|myelin regulatory factor	ENSMUST00000088013.12|Myrf|ENSMUSG00000036098.16|myelin regulatory factor
mm39_v1_chr2_+_91287846_91287894	1.19355	CCAGUGU	ENSMUST00000028689.4|Lrp4|ENSMUSG00000027253.16|low density lipoprotein receptor-related protein 4
mm39_v1_chr8_-_74080101_74080180	1.18909	CCAGUGU	ENSMUST00000119826.7|Large1|ENSMUSG00000004383.19|LARGE xylosyl- and glucuronyltransferase 1	ENSMUST00000212459.2|Large1|ENSMUSG00000004383.19|LARGE xylosyl- and glucuronyltransferase 1
mm39_v1_chrX_+_13147209_13147270	1.18119	CCAGUGU	ENSMUST00000000804.7|Ddx3x|ENSMUSG00000000787.13|DEAD box helicase 3, X-linked
mm39_v1_chr11_-_69586884_69586929	1.17178	CCAGUGU	ENSMUST00000180587.8|Tnfsfm13|ENSMUSG00000018752.20|tumor necrosis factor (ligand) superfamily, membrane-bound member 13
mm39_v1_chr16_+_14179421_14179475	1.1588	CCAGUGU	ENSMUST00000100167.10|Abcc1|ENSMUSG00000023088.18|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	ENSMUST00000154748.8|Abcc1|ENSMUSG00000023088.18|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	ENSMUST00000134776.8|Abcc1|ENSMUSG00000023088.18|ATP-binding cassette, sub-family C (CFTR/MRP), member 1
mm39_v1_chr6_+_122285615_122285679	1.1283	CCAGUGU	ENSMUST00000007602.15|M6pr|ENSMUSG00000007458.15|mannose-6-phosphate receptor, cation dependent	ENSMUST00000112610.2|M6pr|ENSMUSG00000007458.15|mannose-6-phosphate receptor, cation dependent
mm39_v1_chr10_+_19810037_19810272	1.12257	CCAGUGU	ENSMUST00000095806.10|Map3k5|ENSMUSG00000071369.12|mitogen-activated protein kinase kinase kinase 5	ENSMUST00000120259.8|Map3k5|ENSMUSG00000071369.12|mitogen-activated protein kinase kinase kinase 5
mm39_v1_chr7_-_4998295_4998339	1.10573	CCAGUGU	ENSMUST00000162731.2|Zfp579|ENSMUSG00000051550.11|zinc finger protein 579
mm39_v1_chr5_-_25047577_25047623	1.10392	CCAGUGU	ENSMUST00000030787.9|Rheb|ENSMUSG00000028945.10|Ras homolog enriched in brain
mm39_v1_chr5_+_115644727_115644915	1.09919	CCAGUGU	ENSMUST00000067268.15|Pxn|ENSMUSG00000029528.20|paxillin	ENSMUST00000086523.7|Pxn|ENSMUSG00000029528.20|paxillin	ENSMUST00000212819.3|Pxn|ENSMUSG00000029528.20|paxillin
mm39_v1_chr3_+_146205562_146205645	1.08955	CCAGUGU	ENSMUST00000090031.12|Gng5|ENSMUSG00000068523.13|guanine nucleotide binding protein (G protein), gamma 5	ENSMUST00000118280.2|Gng5|ENSMUSG00000068523.13|guanine nucleotide binding protein (G protein), gamma 5
mm39_v1_chr13_+_45660905_45660994	1.06092	CCAGUGU	ENSMUST00000000260.13|Gmpr|ENSMUSG00000000253.14|guanosine monophosphate reductase
mm39_v1_chr2_-_74489763_74489901	1.05889	CCAGUGU	ENSMUST00000173623.2|Evx2|ENSMUSG00000001815.16|even-skipped homeobox 2	ENSMUST00000001867.13|Evx2|ENSMUSG00000001815.16|even-skipped homeobox 2
mm39_v1_chr1_+_12762501_12762590	1.04225	CCAGUGU	ENSMUST00000177608.8|Sulf1|ENSMUSG00000016918.16|sulfatase 1	ENSMUST00000180062.8|Sulf1|ENSMUSG00000016918.16|sulfatase 1
mm39_v1_chr17_+_64203017_64203059	1.01815	CCAGUGU	ENSMUST00000000129.14|Fer|ENSMUSG00000000127.16|fer (fms/fps related) protein kinase
mm39_v1_chr17_-_36011378_36011502	1.01339	CCAGUGU	ENSMUST00000119825.8|Ddr1|ENSMUSG00000003534.18|discoidin domain receptor family, member 1
mm39_v1_chr19_+_5088854_5088967	1.00112	CCAGUGU	ENSMUST00000053705.8|B4gat1|ENSMUSG00000047379.8|beta-1,4-glucuronyltransferase 1	ENSMUST00000235776.2|B4gat1|ENSMUSG00000047379.8|beta-1,4-glucuronyltransferase 1
mm39_v1_chr8_+_121842902_121842916	0.99859	CCAGUGU	ENSMUST00000054691.8|Foxc2|ENSMUSG00000046714.8|forkhead box C2
mm39_v1_chr5_-_76452365_76452398	0.997133	CCAGUGU	ENSMUST00000075159.5|Clock|ENSMUSG00000029238.12|circadian locomotor output cycles kaput
mm39_v1_chr2_+_152068729_152068828	0.990967	CCAGUGU	ENSMUST00000099224.10|Csnk2a1|ENSMUSG00000074698.11|casein kinase 2, alpha 1 polypeptide	ENSMUST00000124791.8|Csnk2a1|ENSMUSG00000074698.11|casein kinase 2, alpha 1 polypeptide	ENSMUST00000133119.2|Csnk2a1|ENSMUSG00000074698.11|casein kinase 2, alpha 1 polypeptide
mm39_v1_chr9_+_32607301_32607417	0.973679	CCAGUGU	ENSMUST00000034534.13|Ets1|ENSMUSG00000032035.17|E26 avian leukemia oncogene 1, 5' domain	ENSMUST00000050797.14|Ets1|ENSMUSG00000032035.17|E26 avian leukemia oncogene 1, 5' domain	ENSMUST00000184887.2|Ets1|ENSMUSG00000032035.17|E26 avian leukemia oncogene 1, 5' domain
mm39_v1_chr15_+_80057894_80057922	0.968454	CCAGUGU	ENSMUST00000044970.7|Mgat3|ENSMUSG00000042428.7|mannoside acetylglucosaminyltransferase 3
mm39_v1_chr6_+_116314975_116315044	0.948802	CCAGUGU	ENSMUST00000079012.13|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000101032.10|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000123405.8|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000204657.3|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000203116.2|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000203193.3|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000126376.8|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8
mm39_v1_chr11_-_69576363_69576391	0.945935	CCAGUGU	ENSMUST00000018896.14|Tnfsf13|ENSMUSG00000089669.8|tumor necrosis factor (ligand) superfamily, member 13
mm39_v1_chr11_-_88742285_88742349	0.931244	CCAGUGU	ENSMUST00000107903.8|Akap1|ENSMUSG00000018428.16|A kinase (PRKA) anchor protein 1
mm39_v1_chr11_+_50116145_50116257	0.921436	CCAGUGU	ENSMUST00000041725.14|Mgat4b|ENSMUSG00000036620.15|mannoside acetylglucosaminyltransferase 4, isoenzyme B
mm39_v1_chr17_-_35293447_35293476	0.920221	CCAGUGU	ENSMUST00000007259.4|Ly6g6d|ENSMUSG00000073413.10|lymphocyte antigen 6 complex, locus G6D
mm39_v1_chr11_+_116324913_116324932	0.89272	CCAGUGU	ENSMUST00000057676.7|Ubald2|ENSMUSG00000050628.7|UBA-like domain containing 2
mm39_v1_chr2_+_48704121_48704187	0.858037	CCAGUGU	ENSMUST00000063886.4|Acvr2a|ENSMUSG00000052155.6|activin receptor IIA
mm39_v1_chr8_-_91074971_91075014	0.822015	CCAGUGU	ENSMUST00000109621.10|Tox3|ENSMUSG00000043668.14|TOX high mobility group box family member 3
mm39_v1_chr18_-_10182007_10182092	0.818279	CCAGUGU	ENSMUST00000067947.7|Rock1|ENSMUSG00000024290.10|Rho-associated coiled-coil containing protein kinase 1
mm39_v1_chr4_-_126362372_126362446	0.808702	CCAGUGU	ENSMUST00000097888.10|Ago1|ENSMUSG00000041530.18|argonaute RISC catalytic subunit 1	ENSMUST00000239399.2|Ago1|ENSMUSG00000041530.18|argonaute RISC catalytic subunit 1
mm39_v1_chr8_-_73246435_73246507	0.78823	CCAGUGU	ENSMUST00000152080.8|Slc35e1|ENSMUSG00000019731.14|solute carrier family 35, member E1
mm39_v1_chr12_+_73948143_73948166	0.775035	CCAGUGU	ENSMUST00000110461.8|Hif1a|ENSMUSG00000021109.14|hypoxia inducible factor 1, alpha subunit
mm39_v1_chr6_+_38410848_38410901	0.772815	CCAGUGU	ENSMUST00000160583.8|Ubn2|ENSMUSG00000038538.18|ubinuclein 2
mm39_v1_chr4_-_120955387_120955447	0.756486	CCAGUGU	ENSMUST00000058754.9|Zmpste24|ENSMUSG00000043207.11|zinc metallopeptidase, STE24
mm39_v1_chr7_+_101859542_101859652	0.753712	CCAGUGU	ENSMUST00000140631.2|Pgap2|ENSMUSG00000030990.19|post-GPI attachment to proteins 2	ENSMUST00000120879.8|Pgap2|ENSMUSG00000030990.19|post-GPI attachment to proteins 2	ENSMUST00000146996.8|Pgap2|ENSMUSG00000030990.19|post-GPI attachment to proteins 2
mm39_v1_chr5_+_44025876_44025895	0.731303	CCAGUGU	ENSMUST00000030964.6|Cd38|ENSMUSG00000029084.6|CD38 antigen
mm39_v1_chr4_+_62883796_62883854	0.726389	CCAGUGU	ENSMUST00000030043.13|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618	ENSMUST00000107415.8|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618	ENSMUST00000064814.6|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618
mm39_v1_chr15_-_77726333_77726375	0.715437	CCAGUGU	ENSMUST00000016771.13|Myh9|ENSMUSG00000022443.18|myosin, heavy polypeptide 9, non-muscle
mm39_v1_chr19_-_44058175_44058226	0.713054	CCAGUGU	ENSMUST00000172041.8|Erlin1|ENSMUSG00000025198.17|ER lipid raft associated 1	ENSMUST00000071698.13|Erlin1|ENSMUSG00000025198.17|ER lipid raft associated 1	ENSMUST00000112028.10|Erlin1|ENSMUSG00000025198.17|ER lipid raft associated 1
mm39_v1_chr4_-_43562397_43562438	0.711358	CCAGUGU	ENSMUST00000030187.14|Tln1|ENSMUSG00000028465.17|talin 1
mm39_v1_chr7_+_100122192_100122205	0.709632	CCAGUGU	ENSMUST00000032958.14|Ucp3|ENSMUSG00000032942.15|uncoupling protein 3 (mitochondrial, proton carrier)	ENSMUST00000107059.2|Ucp3|ENSMUSG00000032942.15|uncoupling protein 3 (mitochondrial, proton carrier)
mm39_v1_chr12_-_5425682_5425705	0.707735	CCAGUGU	ENSMUST00000020958.9|Klhl29|ENSMUSG00000020627.11|kelch-like 29
mm39_v1_chr13_-_99027544_99027571	0.698686	CCAGUGU	ENSMUST00000109399.9|Tnpo1|ENSMUSG00000009470.18|transportin 1
mm39_v1_chr4_-_44167509_44167609	0.693589	CCAGUGU	ENSMUST00000098098.9|Rnf38|ENSMUSG00000035696.16|ring finger protein 38
mm39_v1_chr8_+_46924074_46924146	0.669282	CCAGUGU	ENSMUST00000034046.13|Acsl1|ENSMUSG00000018796.14|acyl-CoA synthetase long-chain family member 1	ENSMUST00000211644.2|Acsl1|ENSMUSG00000018796.14|acyl-CoA synthetase long-chain family member 1
mm39_v1_chr1_+_178146689_178146703	0.663975	CCAGUGU	ENSMUST00000027781.7|Cox20|ENSMUSG00000026500.7|cytochrome c oxidase assembly protein 20
mm39_v1_chr14_+_118374511_118374590	0.650789	CCAGUGU	ENSMUST00000022728.4|Gpr180|ENSMUSG00000022131.4|G protein-coupled receptor 180
mm39_v1_chr11_-_23447866_23447962	0.647948	CCAGUGU	ENSMUST00000128559.2|Ahsa2|ENSMUSG00000020288.14|AHA1, activator of heat shock protein ATPase 2	ENSMUST00000147157.8|Ahsa2|ENSMUSG00000020288.14|AHA1, activator of heat shock protein ATPase 2	ENSMUST00000109539.8|Ahsa2|ENSMUSG00000020288.14|AHA1, activator of heat shock protein ATPase 2
mm39_v1_chr6_-_6217021_6217125	0.647314	CCAGUGU	ENSMUST00000015256.15|Slc25a13|ENSMUSG00000015112.16|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm39_v1_chr10_+_128212953_128213024	0.642408	CCAGUGU	ENSMUST00000014642.10|Ankrd52|ENSMUSG00000014498.10|ankyrin repeat domain 52
mm39_v1_chr9_+_22099386_22099464	0.631426	CCAGUGU	ENSMUST00000217301.2|Zfp872|ENSMUSG00000074472.11|zinc finger protein 872	ENSMUST00000178901.8|Zfp872|ENSMUSG00000074472.11|zinc finger protein 872
mm39_v1_chr14_+_26300693_26300767	0.629411	CCAGUGU	ENSMUST00000203874.3|Dennd6a|ENSMUSG00000040818.11|DENN/MADD domain containing 6A	ENSMUST00000037585.9|Dennd6a|ENSMUSG00000040818.11|DENN/MADD domain containing 6A
mm39_v1_chr18_+_36414122_36414204	0.61799	CCAGUGU	ENSMUST00000051301.6|Pura|ENSMUSG00000043991.6|purine rich element binding protein A
mm39_v1_chr2_+_109721189_109721226	0.610727	CCAGUGU	ENSMUST00000028583.8|Lin7c|ENSMUSG00000027162.8|lin-7 homolog C (C. elegans)
mm39_v1_chr6_+_120643323_120643386	0.60914	CCAGUGU	ENSMUST00000112686.8|Cecr2|ENSMUSG00000071226.12|CECR2, histone acetyl-lysine reader
mm39_v1_chr5_-_96309849_96309956	0.598101	CCAGUGU	ENSMUST00000155901.8|Cnot6l|ENSMUSG00000034724.19|CCR4-NOT transcription complex, subunit 6-like
mm39_v1_chr2_+_175116918_175116918	0.575177	CCAGUGU	ENSMUST00000109051.8|Gm14440|ENSMUSG00000078901.9|predicted gene 14440
mm39_v1_chr12_-_51876282_51876336	0.574772	CCAGUGU	ENSMUST00000042052.9|Hectd1|ENSMUSG00000035247.17|HECT domain E3 ubiquitin protein ligase 1	ENSMUST00000179265.8|Hectd1|ENSMUSG00000035247.17|HECT domain E3 ubiquitin protein ligase 1
mm39_v1_chr1_-_143578542_143578631	0.547987	CCAGUGU	ENSMUST00000018337.9|Cdc73|ENSMUSG00000026361.10|cell division cycle 73, Paf1/RNA polymerase II complex component
mm39_v1_chr2_-_103627937_103628009	0.545149	CCAGUGU	ENSMUST00000028607.13|Caprin1|ENSMUSG00000027184.15|cell cycle associated protein 1
mm39_v1_chr10_+_107998219_107998269	0.537834	CCAGUGU	ENSMUST00000070663.6|Ppp1r12a|ENSMUSG00000019907.11|protein phosphatase 1, regulatory subunit 12A
mm39_v1_chrX_-_153999440_153999452	0.523772	CCAGUGU	ENSMUST00000026318.15|Sat1|ENSMUSG00000025283.16|spermidine/spermine N1-acetyl transferase 1
mm39_v1_chr11_-_49603501_49603555	0.523311	CCAGUGU	ENSMUST00000020624.7|Cnot6|ENSMUSG00000020362.14|CCR4-NOT transcription complex, subunit 6	ENSMUST00000145353.8|Cnot6|ENSMUSG00000020362.14|CCR4-NOT transcription complex, subunit 6
mm39_v1_chr7_-_115637970_115637985	0.511932	CCAGUGU	ENSMUST00000166877.8|Sox6|ENSMUSG00000051910.14|SRY (sex determining region Y)-box 6
mm39_v1_chrX_+_23559282_23559357	0.509696	CCAGUGU	ENSMUST00000035766.13|Wdr44|ENSMUSG00000036769.15|WD repeat domain 44	ENSMUST00000101670.3|Wdr44|ENSMUSG00000036769.15|WD repeat domain 44
mm39_v1_chr4_+_42949814_42949924	0.475987	CCAGUGU	ENSMUST00000037872.10|Dnajb5|ENSMUSG00000036052.15|DnaJ heat shock protein family (Hsp40) member B5	ENSMUST00000098112.9|Dnajb5|ENSMUSG00000036052.15|DnaJ heat shock protein family (Hsp40) member B5
mm39_v1_chr6_+_65019574_65019651	0.468108	CCAGUGU	ENSMUST00000031984.9|Smarcad1|ENSMUSG00000029920.10|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	ENSMUST00000205118.3|Smarcad1|ENSMUSG00000029920.10|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm39_v1_chr16_-_95928804_95928939	0.466667	CCAGUGU	ENSMUST00000233292.2|Hmgn1|ENSMUSG00000040681.17|high mobility group nucleosomal binding domain 1	ENSMUST00000050884.16|Hmgn1|ENSMUSG00000040681.17|high mobility group nucleosomal binding domain 1
mm39_v1_chr4_-_109333866_109333924	0.460794	CCAGUGU	ENSMUST00000030284.10|Rnf11|ENSMUSG00000028557.11|ring finger protein 11
mm39_v1_chr2_-_181101158_181101232	0.457497	CCAGUGU	ENSMUST00000155535.2|Zbtb46|ENSMUSG00000027583.14|zinc finger and BTB domain containing 46	ENSMUST00000029106.13|Zbtb46|ENSMUSG00000027583.14|zinc finger and BTB domain containing 46	ENSMUST00000087409.10|Zbtb46|ENSMUSG00000027583.14|zinc finger and BTB domain containing 46
mm39_v1_chr10_+_51898598_51898630	0.430798	CCAGUGU	ENSMUST00000163017.10|Vgll2|ENSMUSG00000049641.16|vestigial like family member 2
mm39_v1_chr3_-_69034425_69034446	0.428124	CCAGUGU	ENSMUST00000194558.6|Kpna4|ENSMUSG00000027782.11|karyopherin (importin) alpha 4	ENSMUST00000029353.9|Kpna4|ENSMUSG00000027782.11|karyopherin (importin) alpha 4
mm39_v1_chr19_+_8875459_8875489	0.425166	CCAGUGU	ENSMUST00000096246.5|Ganab|ENSMUSG00000071650.7|alpha glucosidase 2 alpha neutral subunit	ENSMUST00000235274.2|Ganab|ENSMUSG00000071650.7|alpha glucosidase 2 alpha neutral subunit
mm39_v1_chr12_+_112645237_112645312	0.404216	CCAGUGU	ENSMUST00000174780.2|Zbtb42|ENSMUSG00000037638.6|zinc finger and BTB domain containing 42	ENSMUST00000169593.2|Zbtb42|ENSMUSG00000037638.6|zinc finger and BTB domain containing 42	ENSMUST00000173942.2|Zbtb42|ENSMUSG00000037638.6|zinc finger and BTB domain containing 42
mm39_v1_chr4_-_141412910_141412910	0.399826	CCAGUGU	ENSMUST00000105782.2|Rsc1a1|ENSMUSG00000040715.13|regulatory solute carrier protein, family 1, member 1
mm39_v1_chr12_+_69418886_69418946	0.363347	CCAGUGU	ENSMUST00000050063.9|Arf6|ENSMUSG00000044147.9|ADP-ribosylation factor 6
mm39_v1_chr9_+_108820846_108821046	0.363312	CCAGUGU	ENSMUST00000198140.5|Pfkfb4|ENSMUSG00000025648.19|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	ENSMUST00000051873.15|Pfkfb4|ENSMUSG00000025648.19|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
mm39_v1_chr4_-_11007635_11007676	0.357872	CCAGUGU	ENSMUST00000054776.4|Plekhf2|ENSMUSG00000049969.4|pleckstrin homology domain containing, family F (with FYVE domain) member 2
mm39_v1_chr4_-_154721288_154721330	0.35327	CCAGUGU	ENSMUST00000030902.13|Prdm16|ENSMUSG00000039410.17|PR domain containing 16	ENSMUST00000105637.8|Prdm16|ENSMUSG00000039410.17|PR domain containing 16	ENSMUST00000070313.14|Prdm16|ENSMUSG00000039410.17|PR domain containing 16	ENSMUST00000105636.8|Prdm16|ENSMUSG00000039410.17|PR domain containing 16	ENSMUST00000105638.9|Prdm16|ENSMUSG00000039410.17|PR domain containing 16	ENSMUST00000097759.9|Prdm16|ENSMUSG00000039410.17|PR domain containing 16	ENSMUST00000124771.2|Prdm16|ENSMUSG00000039410.17|PR domain containing 16
mm39_v1_chr7_-_88987917_88988003	0.35309	CCAGUGU	ENSMUST00000137723.2|Tmem135|ENSMUSG00000039428.12|transmembrane protein 135	ENSMUST00000117852.8|Tmem135|ENSMUSG00000039428.12|transmembrane protein 135	ENSMUST00000041968.11|Tmem135|ENSMUSG00000039428.12|transmembrane protein 135
mm39_v1_chr3_-_116506294_116506302	0.347325	CCAGUGU	ENSMUST00000029569.9|Slc35a3|ENSMUSG00000027957.14|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
mm39_v1_chr11_+_70453806_70453896	0.322309	CCAGUGU	ENSMUST00000079244.12|Mink1|ENSMUSG00000020827.19|misshapen-like kinase 1 (zebrafish)	ENSMUST00000102558.11|Mink1|ENSMUSG00000020827.19|misshapen-like kinase 1 (zebrafish)
mm39_v1_chr4_-_62420470_62420519	0.315497	CCAGUGU	ENSMUST00000037820.3|Hdhd3|ENSMUSG00000038422.3|haloacid dehalogenase-like hydrolase domain containing 3
mm39_v1_chr9_-_114393406_114393437	0.311838	CCAGUGU	ENSMUST00000111816.3|Trim71|ENSMUSG00000079259.3|tripartite motif-containing 71
mm39_v1_chr11_+_98239230_98239260	0.309017	CCAGUGU	ENSMUST00000078694.13|Ppp1r1b|ENSMUSG00000061718.13|protein phosphatase 1, regulatory inhibitor subunit 1B
mm39_v1_chr13_+_111822712_111822745	0.302317	CCAGUGU	ENSMUST00000109272.9|Mier3|ENSMUSG00000032727.15|MIER family member 3
mm39_v1_chr14_-_65187287_65187335	0.2927	CCAGUGU	ENSMUST00000067843.10|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1	ENSMUST00000176489.8|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1	ENSMUST00000175905.8|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1	ENSMUST00000022544.14|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1	ENSMUST00000175744.8|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1	ENSMUST00000176128.8|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1
mm39_v1_chr4_+_108576846_108576846	0.283642	CCAGUGU	ENSMUST00000178992.2|3110021N24Rik|ENSMUSG00000094958.2|RIKEN cDNA 3110021N24 gene
mm39_v1_chr5_+_150876072_150876179	0.273525	CCAGUGU	ENSMUST00000078856.8|Kl|ENSMUSG00000058488.8|klotho
mm39_v1_chr2_-_176619602_176619602	0.259711	CCAGUGU	ENSMUST00000099007.3|Gm14296|ENSMUSG00000074527.12|predicted gene 14296
mm39_v1_chr6_-_39095144_39095283	0.251332	CCAGUGU	ENSMUST00000038398.7|Parp12|ENSMUSG00000038507.7|poly (ADP-ribose) polymerase family, member 12
mm39_v1_chr12_-_55867941_55867995	0.249326	CCAGUGU	ENSMUST00000085385.7|Ralgapa1|ENSMUSG00000021027.18|Ral GTPase activating protein, alpha subunit 1	ENSMUST00000110687.8|Ralgapa1|ENSMUSG00000021027.18|Ral GTPase activating protein, alpha subunit 1
mm39_v1_chr19_-_60569323_60569468	0.245573	CCAGUGU	ENSMUST00000111460.5|Cacul1|ENSMUSG00000033417.17|CDK2 associated, cullin domain 1	ENSMUST00000166712.9|Cacul1|ENSMUSG00000033417.17|CDK2 associated, cullin domain 1	ENSMUST00000081790.15|Cacul1|ENSMUSG00000033417.17|CDK2 associated, cullin domain 1
mm39_v1_chr7_+_73025243_73025299	0.235496	CCAGUGU	ENSMUST00000119206.3|Rgma|ENSMUSG00000070509.16|repulsive guidance molecule family member A	ENSMUST00000094312.12|Rgma|ENSMUSG00000070509.16|repulsive guidance molecule family member A
mm39_v1_chr8_-_69187708_69187800	0.234965	CCAGUGU	ENSMUST00000136060.8|Csgalnact1|ENSMUSG00000036356.16|chondroitin sulfate N-acetylgalactosaminyltransferase 1	ENSMUST00000130214.8|Csgalnact1|ENSMUSG00000036356.16|chondroitin sulfate N-acetylgalactosaminyltransferase 1	ENSMUST00000078350.13|Csgalnact1|ENSMUSG00000036356.16|chondroitin sulfate N-acetylgalactosaminyltransferase 1
mm39_v1_chr11_-_104333059_104333117	0.230793	CCAGUGU	ENSMUST00000106977.8|Kansl1|ENSMUSG00000018412.17|KAT8 regulatory NSL complex subunit 1	ENSMUST00000106972.8|Kansl1|ENSMUSG00000018412.17|KAT8 regulatory NSL complex subunit 1
mm39_v1_chr8_+_72676649_72676728	0.229079	CCAGUGU	ENSMUST00000119003.2|Zfp617|ENSMUSG00000066880.16|zinc finger protein 617
mm39_v1_chr6_-_115971914_115971971	0.226994	CCAGUGU	ENSMUST00000015511.15|Plxnd1|ENSMUSG00000030123.16|plexin D1
mm39_v1_chr5_+_48140480_48140504	0.214585	CCAGUGU	ENSMUST00000173107.8|Slit2|ENSMUSG00000031558.16|slit guidance ligand 2	ENSMUST00000174313.8|Slit2|ENSMUSG00000031558.16|slit guidance ligand 2	ENSMUST00000174421.8|Slit2|ENSMUSG00000031558.16|slit guidance ligand 2	ENSMUST00000170109.9|Slit2|ENSMUSG00000031558.16|slit guidance ligand 2
mm39_v1_chr11_+_87938519_87938554	0.213569	CCAGUGU	ENSMUST00000079866.11|Srsf1|ENSMUSG00000018379.18|serine and arginine-rich splicing factor 1
mm39_v1_chr1_-_59276252_59276416	0.210998	CCAGUGU	ENSMUST00000163058.2|Als2|ENSMUSG00000026024.15|alsin Rho guanine nucleotide exchange factor	ENSMUST00000160945.2|Als2|ENSMUSG00000026024.15|alsin Rho guanine nucleotide exchange factor	ENSMUST00000027178.13|Als2|ENSMUSG00000026024.15|alsin Rho guanine nucleotide exchange factor
mm39_v1_chr4_-_126427234_126427272	0.210071	CCAGUGU	ENSMUST00000084289.5|Ago4|ENSMUSG00000042500.12|argonaute RISC catalytic subunit 4
mm39_v1_chr8_+_34621717_34621808	0.207705	CCAGUGU	ENSMUST00000239436.2|Saraf|ENSMUSG00000031532.8|store-operated calcium entry-associated regulatory factor	ENSMUST00000033933.8|Saraf|ENSMUSG00000031532.8|store-operated calcium entry-associated regulatory factor
mm39_v1_chr2_+_175968362_175968366	0.182275	CCAGUGU	ENSMUST00000099009.9|2210418O10Rik|ENSMUSG00000078894.10|RIKEN cDNA 2210418O10 gene	ENSMUST00000136719.2|2210418O10Rik|ENSMUSG00000078894.10|RIKEN cDNA 2210418O10 gene
mm39_v1_chr2_+_14609063_14609117	0.178276	CCAGUGU	ENSMUST00000114723.9|Cacnb2|ENSMUSG00000057914.16|calcium channel, voltage-dependent, beta 2 subunit
mm39_v1_chr13_-_67632333_67632397	0.167438	CCAGUGU	ENSMUST00000223868.2|Zfp874b|ENSMUSG00000059839.10|zinc finger protein 874b	ENSMUST00000019572.9|Zfp874b|ENSMUSG00000059839.10|zinc finger protein 874b
mm39_v1_chr6_-_148732946_148732992	0.157645	CCAGUGU	ENSMUST00000048418.14|Ipo8|ENSMUSG00000040029.16|importin 8
mm39_v1_chr5_+_139186386_139186440	0.155134	CCAGUGU	ENSMUST00000058716.14|Sun1|ENSMUSG00000036817.15|Sad1 and UNC84 domain containing 1	ENSMUST00000110883.9|Sun1|ENSMUSG00000036817.15|Sad1 and UNC84 domain containing 1	ENSMUST00000110884.9|Sun1|ENSMUSG00000036817.15|Sad1 and UNC84 domain containing 1	ENSMUST00000100517.10|Sun1|ENSMUSG00000036817.15|Sad1 and UNC84 domain containing 1	ENSMUST00000127045.8|Sun1|ENSMUSG00000036817.15|Sad1 and UNC84 domain containing 1	ENSMUST00000143562.8|Sun1|ENSMUSG00000036817.15|Sad1 and UNC84 domain containing 1	ENSMUST00000078690.13|Sun1|ENSMUSG00000036817.15|Sad1 and UNC84 domain containing 1	ENSMUST00000146715.8|Sun1|ENSMUSG00000036817.15|Sad1 and UNC84 domain containing 1
mm39_v1_chr4_+_44981389_44981461	0.149997	CCAGUGU	ENSMUST00000045078.13|Grhpr|ENSMUSG00000035637.15|glyoxylate reductase/hydroxypyruvate reductase	ENSMUST00000128973.2|Grhpr|ENSMUSG00000035637.15|glyoxylate reductase/hydroxypyruvate reductase	ENSMUST00000151148.8|Grhpr|ENSMUSG00000035637.15|glyoxylate reductase/hydroxypyruvate reductase
mm39_v1_chr11_-_59363289_59363333	0.135559	CCAGUGU	ENSMUST00000057799.8|Zfp867|ENSMUSG00000054519.9|zinc finger protein 867
mm39_v1_chr11_-_102588536_102588608	0.134199	CCAGUGU	ENSMUST00000164506.3|Ccdc43|ENSMUSG00000020925.17|coiled-coil domain containing 43	ENSMUST00000092569.13|Ccdc43|ENSMUSG00000020925.17|coiled-coil domain containing 43
mm39_v1_chr16_+_37909363_37909426	0.129962	CCAGUGU	ENSMUST00000023507.13|Gsk3b|ENSMUSG00000022812.15|glycogen synthase kinase 3 beta
mm39_v1_chr13_+_62277700_62277737	0.123161	CCAGUGU	ENSMUST00000221772.2|Zfp808|ENSMUSG00000074867.5|zinc finger protein 808	ENSMUST00000099449.4|Zfp808|ENSMUSG00000074867.5|zinc finger protein 808
mm39_v1_chr3_+_157653051_157653148	0.121047	CCAGUGU	ENSMUST00000164582.4|Ankrd13c|ENSMUSG00000039988.15|ankyrin repeat domain 13c	ENSMUST00000040787.13|Ankrd13c|ENSMUSG00000039988.15|ankyrin repeat domain 13c
mm39_v1_chr1_+_44159106_44159147	0.103943	CCAGUGU	ENSMUST00000114709.3|Bivm|ENSMUSG00000041684.12|basic, immunoglobulin-like variable motif containing	ENSMUST00000129068.2|Bivm|ENSMUSG00000041684.12|basic, immunoglobulin-like variable motif containing
mm39_v1_chr7_-_34012956_34012993	0.0943873	CCAGUGU	ENSMUST00000108074.8|Garre1|ENSMUSG00000066571.14|granule associated Rac and RHOG effector 1
mm39_v1_chr8_-_106553822_106553982	0.0923341	CCAGUGU	ENSMUST00000239468.2|Ranbp10|ENSMUSG00000037415.8|RAN binding protein 10	ENSMUST00000041400.6|Ranbp10|ENSMUSG00000037415.8|RAN binding protein 10
mm39_v1_chr5_+_122781941_122782072	0.077356	CCAGUGU	ENSMUST00000100737.10|P2rx7|ENSMUSG00000029468.18|purinergic receptor P2X, ligand-gated ion channel, 7	ENSMUST00000121489.8|P2rx7|ENSMUSG00000029468.18|purinergic receptor P2X, ligand-gated ion channel, 7	ENSMUST00000031425.15|P2rx7|ENSMUSG00000029468.18|purinergic receptor P2X, ligand-gated ion channel, 7	ENSMUST00000086247.6|P2rx7|ENSMUSG00000029468.18|purinergic receptor P2X, ligand-gated ion channel, 7
mm39_v1_chr4_-_25800083_25800146	0.0719693	CCAGUGU	ENSMUST00000084770.5|Fut9|ENSMUSG00000055373.9|fucosyltransferase 9
mm39_v1_chr4_-_34614883_34614944	0.0620761	CCAGUGU	ENSMUST00000140334.2|Orc3|ENSMUSG00000040044.12|origin recognition complex, subunit 3	ENSMUST00000108142.8|Orc3|ENSMUSG00000040044.12|origin recognition complex, subunit 3	ENSMUST00000048706.10|Orc3|ENSMUSG00000040044.12|origin recognition complex, subunit 3
mm39_v1_chr14_+_47120311_47120446	0.0569549	CCAGUGU	ENSMUST00000022386.15|Samd4|ENSMUSG00000021838.18|sterile alpha motif domain containing 4	ENSMUST00000228404.2|Samd4|ENSMUSG00000021838.18|sterile alpha motif domain containing 4	ENSMUST00000100672.11|Samd4|ENSMUSG00000021838.18|sterile alpha motif domain containing 4
mm39_v1_chr15_+_101071948_101072029	0.0468764	CCAGUGU	ENSMUST00000000544.12|Acvr1b|ENSMUSG00000000532.12|activin A receptor, type 1B
mm39_v1_chr9_+_56902172_56902207	0.0433585	CCAGUGU	ENSMUST00000034832.8|Ptpn9|ENSMUSG00000032290.8|protein tyrosine phosphatase, non-receptor type 9
mm39_v1_chr1_+_118104272_118104272	0.0364502	CCAGUGU	ENSMUST00000186264.2|Gm29106|ENSMUSG00000102030.2|predicted gene 29106
mm39_v1_chr14_-_65335479_65335555	0.0281922	CCAGUGU	ENSMUST00000225633.2|Extl3|ENSMUSG00000021978.10|exostosin-like glycosyltransferase 3	ENSMUST00000022550.8|Extl3|ENSMUSG00000021978.10|exostosin-like glycosyltransferase 3
mm39_v1_chr2_-_39116457_39116468	0.024354	CCAGUGU	ENSMUST00000028087.6|Ppp6c|ENSMUSG00000026753.6|protein phosphatase 6, catalytic subunit
mm39_v1_chr16_+_43993599_43993760	0.0183242	CCAGUGU	ENSMUST00000119746.8|Usf3|ENSMUSG00000068284.15|upstream transcription factor family member 3	ENSMUST00000088356.10|Usf3|ENSMUSG00000068284.15|upstream transcription factor family member 3	ENSMUST00000169582.3|Usf3|ENSMUSG00000068284.15|upstream transcription factor family member 3
mm39_v1_chr6_+_72324281_72324362	0.0121042	CCAGUGU	ENSMUST00000077783.5|0610030E20Rik|ENSMUSG00000058706.6|RIKEN cDNA 0610030E20 gene
mm39_v1_chr16_-_3726503_3726554	0.00999346	CCAGUGU	ENSMUST00000115859.8|1700037C18Rik|ENSMUSG00000005983.16|RIKEN cDNA 1700037C18 gene
mm39_v1_chr7_-_4973960_4973960	0.00997356	CCAGUGU	ENSMUST00000144863.8|Sbk3|ENSMUSG00000085272.8|SH3 domain binding kinase family, member 3
mm39_v1_chr9_-_21504101_21504144	0.00950356	CCAGUGU	ENSMUST00000180365.9|Yipf2|ENSMUSG00000032182.16|Yip1 domain family, member 2	ENSMUST00000213809.2|Yipf2|ENSMUSG00000032182.16|Yip1 domain family, member 2	ENSMUST00000034700.15|Yipf2|ENSMUSG00000032182.16|Yip1 domain family, member 2
mm39_v1_chr9_-_96246460_96246495	0.00879532	CCAGUGU	ENSMUST00000034983.7|Atp1b3|ENSMUSG00000032412.9|ATPase, Na+/K+ transporting, beta 3 polypeptide
