mm39_v1_chr16_-_14109219_14109236	9.73448	CUUUGGU	ENSMUST00000230397.2|Myh11|ENSMUSG00000018830.11|myosin, heavy polypeptide 11, smooth muscle	ENSMUST00000231567.2|Myh11|ENSMUSG00000018830.11|myosin, heavy polypeptide 11, smooth muscle	ENSMUST00000090287.5|Myh11|ENSMUSG00000018830.11|myosin, heavy polypeptide 11, smooth muscle
mm39_v1_chr7_+_18828519_18828558	6.67868	CUUUGGU	ENSMUST00000049454.6|Six5|ENSMUSG00000040841.6|sine oculis-related homeobox 5
mm39_v1_chr16_-_21982049_21982049	6.26605	CUUUGGU	ENSMUST00000100052.11|Igf2bp2|ENSMUSG00000033581.18|insulin-like growth factor 2 mRNA binding protein 2
mm39_v1_chr9_+_69360902_69360998	5.9285	CUUUGGU	ENSMUST00000034756.15|Anxa2|ENSMUSG00000032231.15|annexin A2	ENSMUST00000123470.8|Anxa2|ENSMUSG00000032231.15|annexin A2
mm39_v1_chrX_-_141749704_141749730	5.45002	CUUUGGU	ENSMUST00000041317.3|Ammecr1|ENSMUSG00000042225.4|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
mm39_v1_chr6_-_82751429_82751444	5.34644	CUUUGGU	ENSMUST00000000642.11|Hk2|ENSMUSG00000000628.11|hexokinase 2
mm39_v1_chr16_+_24212284_24212320	5.14741	CUUUGGU	ENSMUST00000038053.14|Lpp|ENSMUSG00000033306.16|LIM domain containing preferred translocation partner in lipoma
mm39_v1_chr7_-_144292257_144292286	4.95895	CUUUGGU	ENSMUST00000121758.8|Ano1|ENSMUSG00000031075.20|anoctamin 1, calcium activated chloride channel
mm39_v1_chr7_-_118091135_118091198	4.94189	CUUUGGU	ENSMUST00000178344.3|Itpripl2|ENSMUSG00000095115.3|inositol 1,4,5-triphosphate receptor interacting protein-like 2
mm39_v1_chr12_-_16850674_16850711	4.84599	CUUUGGU	ENSMUST00000162112.8|Greb1|ENSMUSG00000036523.17|gene regulated by estrogen in breast cancer protein
mm39_v1_chr12_+_8821317_8821328	4.76752	CUUUGGU	ENSMUST00000020911.14|Sdc1|ENSMUSG00000020592.15|syndecan 1
mm39_v1_chr2_-_125348305_125348328	4.75646	CUUUGGU	ENSMUST00000028633.13|Fbn1|ENSMUSG00000027204.14|fibrillin 1
mm39_v1_chr13_-_47083194_47083276	4.42942	CUUUGGU	ENSMUST00000056978.8|Kif13a|ENSMUSG00000021375.12|kinesin family member 13A
mm39_v1_chrX_-_7054952_7054981	4.42806	CUUUGGU	ENSMUST00000004428.14|Clcn5|ENSMUSG00000004317.15|chloride channel, voltage-sensitive 5
mm39_v1_chr1_-_74163575_74163626	4.41426	CUUUGGU	ENSMUST00000169786.8|Tns1|ENSMUSG00000055322.17|tensin 1	ENSMUST00000212888.2|Tns1|ENSMUSG00000055322.17|tensin 1	ENSMUST00000191104.7|Tns1|ENSMUSG00000055322.17|tensin 1
mm39_v1_chr5_+_137348638_137348775	4.40875	CUUUGGU	ENSMUST00000166239.8|Ephb4|ENSMUSG00000029710.16|Eph receptor B4	ENSMUST00000111054.2|Ephb4|ENSMUSG00000029710.16|Eph receptor B4
mm39_v1_chr12_-_87435091_87435129	4.20094	CUUUGGU	ENSMUST00000021424.5|Sptlc2|ENSMUSG00000021036.11|serine palmitoyltransferase, long chain base subunit 2
mm39_v1_chr11_-_7163897_7163937	4.19806	CUUUGGU	ENSMUST00000020702.11|Igfbp3|ENSMUSG00000020427.12|insulin-like growth factor binding protein 3	ENSMUST00000135887.3|Igfbp3|ENSMUSG00000020427.12|insulin-like growth factor binding protein 3
mm39_v1_chr3_+_109030419_109030486	4.16204	CUUUGGU	ENSMUST00000029477.11|Slc25a24|ENSMUSG00000040322.11|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24
mm39_v1_chr5_+_30745447_30745514	4.12092	CUUUGGU	ENSMUST00000066295.5|Kcnk3|ENSMUSG00000049265.9|potassium channel, subfamily K, member 3
mm39_v1_chr17_-_32074754_32074780	4.11518	CUUUGGU	ENSMUST00000024839.6|Sik1|ENSMUSG00000024042.8|salt inducible kinase 1
mm39_v1_chr11_+_75541324_75541370	4.09919	CUUUGGU	ENSMUST00000102505.10|Myo1c|ENSMUSG00000017774.20|myosin IC
mm39_v1_chr11_-_65160767_65160780	4.08656	CUUUGGU	ENSMUST00000102635.10|Myocd|ENSMUSG00000020542.19|myocardin
mm39_v1_chr2_-_119985078_119985092	4.07517	CUUUGGU	ENSMUST00000028755.8|Ehd4|ENSMUSG00000027293.14|EH-domain containing 4
mm39_v1_chr17_+_29020064_29020108	4.06129	CUUUGGU	ENSMUST00000004985.11|Brpf3|ENSMUSG00000063952.17|bromodomain and PHD finger containing, 3
mm39_v1_chr1_-_131025562_131025581	4.05981	CUUUGGU	ENSMUST00000016672.11|Mapkapk2|ENSMUSG00000016528.11|MAP kinase-activated protein kinase 2
mm39_v1_chr4_+_47208004_47208161	3.9169	CUUUGGU	ENSMUST00000082303.13|Col15a1|ENSMUSG00000028339.18|collagen, type XV, alpha 1	ENSMUST00000102917.11|Col15a1|ENSMUSG00000028339.18|collagen, type XV, alpha 1
mm39_v1_chr11_-_100288566_100288617	3.90529	CUUUGGU	ENSMUST00000001592.15|Jup|ENSMUSG00000001552.15|junction plakoglobin	ENSMUST00000107403.2|Jup|ENSMUSG00000001552.15|junction plakoglobin
mm39_v1_chr14_+_99536111_99536133	3.89627	CUUUGGU	ENSMUST00000005279.8|Klf5|ENSMUSG00000005148.9|Kruppel-like factor 5
mm39_v1_chr2_-_65955338_65955486	3.85417	CUUUGGU	ENSMUST00000028378.4|Galnt3|ENSMUSG00000026994.10|polypeptide N-acetylgalactosaminyltransferase 3
mm39_v1_chr8_+_11362805_11362867	3.84301	CUUUGGU	ENSMUST00000033899.14|Col4a2|ENSMUSG00000031503.14|collagen, type IV, alpha 2
mm39_v1_chr10_-_128361731_128361746	3.81809	CUUUGGU	ENSMUST00000026427.8|Esyt1|ENSMUSG00000025366.9|extended synaptotagmin-like protein 1
mm39_v1_chr13_-_111945499_111945552	3.76722	CUUUGGU	ENSMUST00000109267.9|Map3k1|ENSMUSG00000021754.18|mitogen-activated protein kinase kinase kinase 1
mm39_v1_chr3_+_60408600_60408663	3.72369	CUUUGGU	ENSMUST00000099087.8|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1
mm39_v1_chr3_-_89186940_89186954	3.71835	CUUUGGU	ENSMUST00000118860.2|Efna1|ENSMUSG00000027954.10|ephrin A1	ENSMUST00000029566.9|Efna1|ENSMUSG00000027954.10|ephrin A1
mm39_v1_chr3_-_101017594_101017652	3.62862	CUUUGGU	ENSMUST00000102694.4|Ptgfrn|ENSMUSG00000027864.10|prostaglandin F2 receptor negative regulator
mm39_v1_chr4_-_59549314_59549364	3.60898	CUUUGGU	ENSMUST00000148331.9|Ptbp3|ENSMUSG00000028382.16|polypyrimidine tract binding protein 3	ENSMUST00000030076.12|Ptbp3|ENSMUSG00000028382.16|polypyrimidine tract binding protein 3
mm39_v1_chr5_+_73071607_73071647	3.58911	CUUUGGU	ENSMUST00000144843.8|Slain2|ENSMUSG00000036087.19|SLAIN motif family, member 2
mm39_v1_chr13_+_31809774_31809799	3.53718	CUUUGGU	ENSMUST00000042054.3|Foxf2|ENSMUSG00000038402.3|forkhead box F2
mm39_v1_chr9_+_62765362_62765420	3.53612	CUUUGGU	ENSMUST00000213643.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000034777.14|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000163820.3|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000215870.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000214633.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000215968.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4
mm39_v1_chr3_-_129126362_129126375	3.53468	CUUUGGU	ENSMUST00000029658.14|Enpep|ENSMUSG00000028024.15|glutamyl aminopeptidase
mm39_v1_chr6_-_37419030_37419117	3.49849	CUUUGGU	ENSMUST00000041093.6|Creb3l2|ENSMUSG00000038648.6|cAMP responsive element binding protein 3-like 2
mm39_v1_chr17_+_88748139_88748217	3.45918	CUUUGGU	ENSMUST00000112238.9|Foxn2|ENSMUSG00000034998.19|forkhead box N2	ENSMUST00000155640.2|Foxn2|ENSMUSG00000034998.19|forkhead box N2
mm39_v1_chr16_+_29884153_29884169	3.44354	CUUUGGU	ENSMUST00000023171.8|Hes1|ENSMUSG00000022528.9|hes family bHLH transcription factor 1
mm39_v1_chr8_+_106786190_106786265	3.43973	CUUUGGU	ENSMUST00000109308.3|Nfatc3|ENSMUSG00000031902.11|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3
mm39_v1_chr16_+_37597235_37597235	3.41814	CUUUGGU	ENSMUST00000114763.3|Fstl1|ENSMUSG00000022816.12|follistatin-like 1
mm39_v1_chr10_-_117681864_117681940	3.40743	CUUUGGU	ENSMUST00000064667.9|Rap1b|ENSMUSG00000052681.9|RAS related protein 1b
mm39_v1_chr6_-_131365380_131365451	3.35298	CUUUGGU	ENSMUST00000032309.13|Ybx3|ENSMUSG00000030189.16|Y box protein 3	ENSMUST00000087865.4|Ybx3|ENSMUSG00000030189.16|Y box protein 3
mm39_v1_chr8_-_116434517_116434533	3.339	CUUUGGU	ENSMUST00000109104.2|Maf|ENSMUSG00000055435.7|avian musculoaponeurotic fibrosarcoma oncogene homolog
mm39_v1_chr10_+_69048464_69048503	3.33051	CUUUGGU	ENSMUST00000020101.12|Rhobtb1|ENSMUSG00000019944.15|Rho-related BTB domain containing 1
mm39_v1_chr6_-_136638926_136638946	3.33034	CUUUGGU	ENSMUST00000032336.7|Plbd1|ENSMUSG00000030214.8|phospholipase B domain containing 1
mm39_v1_chr17_-_25179635_25179667	3.32421	CUUUGGU	ENSMUST00000024981.9|Jpt2|ENSMUSG00000024165.10|Jupiter microtubule associated homolog 2
mm39_v1_chr6_+_91661034_91661058	3.30934	CUUUGGU	ENSMUST00000032185.9|Slc6a6|ENSMUSG00000030096.9|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
mm39_v1_chr10_+_79690452_79690476	3.27503	CUUUGGU	ENSMUST00000165704.8|Ptbp1|ENSMUSG00000006498.17|polypyrimidine tract binding protein 1
mm39_v1_chr3_+_89325750_89325879	3.26316	CUUUGGU	ENSMUST00000039110.12|Shc1|ENSMUSG00000042626.14|src homology 2 domain-containing transforming protein C1	ENSMUST00000125036.8|Shc1|ENSMUSG00000042626.14|src homology 2 domain-containing transforming protein C1	ENSMUST00000191485.7|Shc1|ENSMUSG00000042626.14|src homology 2 domain-containing transforming protein C1	ENSMUST00000154791.8|Shc1|ENSMUSG00000042626.14|src homology 2 domain-containing transforming protein C1
mm39_v1_chr5_+_77413282_77413396	3.21085	CUUUGGU	ENSMUST00000080359.12|Rest|ENSMUSG00000029249.16|RE1-silencing transcription factor
mm39_v1_chr4_+_137004793_137004800	3.17456	CUUUGGU	ENSMUST00000045747.5|Wnt4|ENSMUSG00000036856.5|wingless-type MMTV integration site family, member 4
mm39_v1_chr7_-_80052491_80052510	3.15549	CUUUGGU	ENSMUST00000122232.8|Furin|ENSMUSG00000030530.16|furin (paired basic amino acid cleaving enzyme)
mm39_v1_chr4_-_125021610_125021636	3.14055	CUUUGGU	ENSMUST00000036188.8|Zc3h12a|ENSMUSG00000042677.8|zinc finger CCCH type containing 12A
mm39_v1_chr16_-_45664664_45664744	3.13689	CUUUGGU	ENSMUST00000036355.13|Phldb2|ENSMUSG00000033149.18|pleckstrin homology like domain, family B, member 2
mm39_v1_chr9_-_85209162_85209183	3.11942	CUUUGGU	ENSMUST00000034802.15|Tent5a|ENSMUSG00000032265.15|terminal nucleotidyltransferase 5A
mm39_v1_chr6_-_52222776_52222806	3.11841	CUUUGGU	ENSMUST00000048026.10|Hoxa11|ENSMUSG00000038210.11|homeobox A11
mm39_v1_chr11_-_101357046_101357065	3.09271	CUUUGGU	ENSMUST00000040430.8|Vat1|ENSMUSG00000034993.8|vesicle amine transport 1
mm39_v1_chr3_-_100396635_100396652	3.06581	CUUUGGU	ENSMUST00000061455.9|Tent5c|ENSMUSG00000044468.15|terminal nucleotidyltransferase 5C
mm39_v1_chr8_+_27575611_27575626	3.06568	CUUUGGU	ENSMUST00000178514.8|Adgra2|ENSMUSG00000031486.16|adhesion G protein-coupled receptor A2	ENSMUST00000033876.14|Adgra2|ENSMUSG00000031486.16|adhesion G protein-coupled receptor A2
mm39_v1_chr5_+_92957231_92957295	2.97372	CUUUGGU	ENSMUST00000113054.9|Shroom3|ENSMUSG00000029381.17|shroom family member 3
mm39_v1_chr2_-_93164812_93164869	2.95878	CUUUGGU	ENSMUST00000111265.9|Tspan18|ENSMUSG00000027217.14|tetraspanin 18
mm39_v1_chr17_+_87270504_87270537	2.95601	CUUUGGU	ENSMUST00000024956.15|Rhoq|ENSMUSG00000024143.16|ras homolog family member Q
mm39_v1_chr10_-_70995485_70995537	2.91839	CUUUGGU	ENSMUST00000014473.6|Bicc1|ENSMUSG00000014329.15|BicC family RNA binding protein 1	ENSMUST00000143791.8|Bicc1|ENSMUSG00000014329.15|BicC family RNA binding protein 1
mm39_v1_chr3_-_131138541_131138589	2.88731	CUUUGGU	ENSMUST00000090246.5|Sgms2|ENSMUSG00000050931.8|sphingomyelin synthase 2	ENSMUST00000126569.2|Sgms2|ENSMUSG00000050931.8|sphingomyelin synthase 2
mm39_v1_chr3_-_102111892_102112009	2.88051	CUUUGGU	ENSMUST00000029453.13|Vangl1|ENSMUSG00000027860.16|VANGL planar cell polarity 1
mm39_v1_chr15_+_7840327_7840327	2.84365	CUUUGGU	ENSMUST00000022744.5|Gdnf|ENSMUSG00000022144.5|glial cell line derived neurotrophic factor
mm39_v1_chr3_+_106455114_106455205	2.82881	CUUUGGU	ENSMUST00000067630.13|Dram2|ENSMUSG00000027900.16|DNA-damage regulated autophagy modulator 2	ENSMUST00000134396.8|Dram2|ENSMUSG00000027900.16|DNA-damage regulated autophagy modulator 2	ENSMUST00000121034.8|Dram2|ENSMUSG00000027900.16|DNA-damage regulated autophagy modulator 2	ENSMUST00000029507.13|Dram2|ENSMUSG00000027900.16|DNA-damage regulated autophagy modulator 2	ENSMUST00000144746.8|Dram2|ENSMUSG00000027900.16|DNA-damage regulated autophagy modulator 2	ENSMUST00000132923.8|Dram2|ENSMUSG00000027900.16|DNA-damage regulated autophagy modulator 2	ENSMUST00000151465.2|Dram2|ENSMUSG00000027900.16|DNA-damage regulated autophagy modulator 2
mm39_v1_chr12_+_70872266_70872288	2.78389	CUUUGGU	ENSMUST00000057859.9|Frmd6|ENSMUSG00000048285.10|FERM domain containing 6
mm39_v1_chr13_+_56757389_56757411	2.75944	CUUUGGU	ENSMUST00000045173.10|Tgfbi|ENSMUSG00000035493.11|transforming growth factor, beta induced
mm39_v1_chr4_-_136563154_136563299	2.75677	CUUUGGU	ENSMUST00000105846.9|Ephb2|ENSMUSG00000028664.15|Eph receptor B2	ENSMUST00000059287.14|Ephb2|ENSMUSG00000028664.15|Eph receptor B2	ENSMUST00000105845.9|Ephb2|ENSMUSG00000028664.15|Eph receptor B2
mm39_v1_chr2_-_60793536_60793595	2.73015	CUUUGGU	ENSMUST00000028347.13|Rbms1|ENSMUSG00000026970.17|RNA binding motif, single stranded interacting protein 1
mm39_v1_chr5_+_114912738_114912738	2.72395	CUUUGGU	ENSMUST00000102578.11|Ankrd13a|ENSMUSG00000041870.18|ankyrin repeat domain 13a
mm39_v1_chr18_+_75953244_75953308	2.70723	CUUUGGU	ENSMUST00000058997.15|Zbtb7c|ENSMUSG00000044646.16|zinc finger and BTB domain containing 7C
mm39_v1_chr6_-_92920466_92920488	2.68808	CUUUGGU	ENSMUST00000113438.8|Adamts9|ENSMUSG00000030022.15|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9
mm39_v1_chr5_-_96309849_96309956	2.68159	CUUUGGU	ENSMUST00000155901.8|Cnot6l|ENSMUSG00000034724.19|CCR4-NOT transcription complex, subunit 6-like
mm39_v1_chr3_-_53564759_53564812	2.67252	CUUUGGU	ENSMUST00000091137.6|Frem2|ENSMUSG00000037016.12|Fras1 related extracellular matrix protein 2
mm39_v1_chr14_-_101846459_101846511	2.65979	CUUUGGU	ENSMUST00000161991.8|Tbc1d4|ENSMUSG00000033083.17|TBC1 domain family, member 4
mm39_v1_chr18_+_61178211_61178278	2.59192	CUUUGGU	ENSMUST00000025522.11|Pdgfrb|ENSMUSG00000024620.12|platelet derived growth factor receptor, beta polypeptide	ENSMUST00000115274.2|Pdgfrb|ENSMUSG00000024620.12|platelet derived growth factor receptor, beta polypeptide
mm39_v1_chr3_+_89427458_89427481	2.57987	CUUUGGU	ENSMUST00000000811.8|Kcnn3|ENSMUSG00000000794.10|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
mm39_v1_chr14_+_65596070_65596135	2.55458	CUUUGGU	ENSMUST00000066994.7|Zfp395|ENSMUSG00000034522.11|zinc finger protein 395
mm39_v1_chr1_-_13660027_13660134	2.54311	CUUUGGU	ENSMUST00000027068.11|Tram1|ENSMUSG00000025935.11|translocating chain-associating membrane protein 1
mm39_v1_chr13_+_111822712_111822745	2.5367	CUUUGGU	ENSMUST00000109272.9|Mier3|ENSMUSG00000032727.15|MIER family member 3
mm39_v1_chr9_+_102594867_102594929	2.53422	CUUUGGU	ENSMUST00000035121.14|Amotl2|ENSMUSG00000032531.16|angiomotin-like 2
mm39_v1_chr1_-_134006847_134006862	2.52939	CUUUGGU	ENSMUST00000020692.7|Btg2|ENSMUSG00000020423.7|BTG anti-proliferation factor 2
mm39_v1_chr12_-_54250646_54250673	2.49978	CUUUGGU	ENSMUST00000039516.4|Egln3|ENSMUSG00000035105.6|egl-9 family hypoxia-inducible factor 3
mm39_v1_chr8_+_93687561_93687672	2.4813	CUUUGGU	ENSMUST00000072939.8|Slc6a2|ENSMUSG00000055368.15|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2
mm39_v1_chr13_+_117356808_117356848	2.47309	CUUUGGU	ENSMUST00000022242.9|Emb|ENSMUSG00000021728.9|embigin
mm39_v1_chr19_+_59249316_59249333	2.44431	CUUUGGU	ENSMUST00000026084.5|Slc18a2|ENSMUSG00000025094.9|solute carrier family 18 (vesicular monoamine), member 2
mm39_v1_chr12_+_111005768_111005834	2.43909	CUUUGGU	ENSMUST00000084968.14|Rcor1|ENSMUSG00000037896.18|REST corepressor 1
mm39_v1_chr10_-_44334711_44334747	2.43045	CUUUGGU	ENSMUST00000039174.11|Prdm1|ENSMUSG00000038151.14|PR domain containing 1, with ZNF domain
mm39_v1_chr19_-_41252370_41252447	2.42941	CUUUGGU	ENSMUST00000237871.2|Tm9sf3|ENSMUSG00000025016.12|transmembrane 9 superfamily member 3	ENSMUST00000025989.10|Tm9sf3|ENSMUSG00000025016.12|transmembrane 9 superfamily member 3
mm39_v1_chr4_+_118384426_118384445	2.41162	CUUUGGU	ENSMUST00000030261.6|2610528J11Rik|ENSMUSG00000028536.13|RIKEN cDNA 2610528J11 gene
mm39_v1_chr11_-_80670815_80670871	2.39035	CUUUGGU	ENSMUST00000041065.14|Myo1d|ENSMUSG00000035441.15|myosin ID	ENSMUST00000070997.6|Myo1d|ENSMUSG00000035441.15|myosin ID
mm39_v1_chr18_+_35251912_35251979	2.37407	CUUUGGU	ENSMUST00000042345.8|Ctnna1|ENSMUSG00000037815.8|catenin (cadherin associated protein), alpha 1	ENSMUST00000236037.2|Ctnna1|ENSMUSG00000037815.8|catenin (cadherin associated protein), alpha 1
mm39_v1_chr14_-_54815000_54815015	2.36113	CUUUGGU	ENSMUST00000054487.10|Ajuba|ENSMUSG00000022178.12|ajuba LIM protein
mm39_v1_chr7_+_141047298_141047338	2.35325	CUUUGGU	ENSMUST00000106000.10|Cd151|ENSMUSG00000025510.15|CD151 antigen	ENSMUST00000209892.2|Cd151|ENSMUSG00000025510.15|CD151 antigen	ENSMUST00000177840.9|Cd151|ENSMUSG00000025510.15|CD151 antigen
mm39_v1_chr16_-_85698679_85698716	2.3389	CUUUGGU	ENSMUST00000023611.7|Adamts5|ENSMUSG00000022894.7|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm39_v1_chr4_+_62204678_62204754	2.33236	CUUUGGU	ENSMUST00000084530.9|Slc31a2|ENSMUSG00000066152.12|solute carrier family 31, member 2
mm39_v1_chrX_-_161671421_161671471	2.3292	CUUUGGU	ENSMUST00000033723.4|Syap1|ENSMUSG00000031357.4|synapse associated protein 1
mm39_v1_chr5_+_103902020_103902056	2.31804	CUUUGGU	ENSMUST00000054979.10|Aff1|ENSMUSG00000029313.19|AF4/FMR2 family, member 1
mm39_v1_chr14_+_70782788_70782800	2.31795	CUUUGGU	ENSMUST00000047218.5|Reep4|ENSMUSG00000033589.5|receptor accessory protein 4
mm39_v1_chr4_-_152080634_152080715	2.31469	CUUUGGU	ENSMUST00000055688.10|Phf13|ENSMUSG00000047777.10|PHD finger protein 13
mm39_v1_chr7_-_109464793_109464886	2.30356	CUUUGGU	ENSMUST00000007423.12|Scube2|ENSMUSG00000007279.15|signal peptide, CUB domain, EGF-like 2	ENSMUST00000106728.3|Scube2|ENSMUSG00000007279.15|signal peptide, CUB domain, EGF-like 2	ENSMUST00000106729.8|Scube2|ENSMUSG00000007279.15|signal peptide, CUB domain, EGF-like 2
mm39_v1_chr2_+_71617266_71617322	2.26085	CUUUGGU	ENSMUST00000112101.8|Itga6|ENSMUSG00000027111.17|integrin alpha 6	ENSMUST00000028522.10|Itga6|ENSMUSG00000027111.17|integrin alpha 6
mm39_v1_chr13_-_116446166_116446235	2.25906	CUUUGGU	ENSMUST00000036060.13|Isl1|ENSMUSG00000042258.14|ISL1 transcription factor, LIM/homeodomain
mm39_v1_chr15_-_77726333_77726375	2.2551	CUUUGGU	ENSMUST00000016771.13|Myh9|ENSMUSG00000022443.18|myosin, heavy polypeptide 9, non-muscle
mm39_v1_chr3_-_27764571_27764616	2.25093	CUUUGGU	ENSMUST00000046157.10|Fndc3b|ENSMUSG00000039286.13|fibronectin type III domain containing 3B
mm39_v1_chr12_+_116244792_116244855	2.24002	CUUUGGU	ENSMUST00000100986.4|Esyt2|ENSMUSG00000021171.9|extended synaptotagmin-like protein 2	ENSMUST00000220816.2|Esyt2|ENSMUSG00000021171.9|extended synaptotagmin-like protein 2
mm39_v1_chr17_-_74601769_74601801	2.23234	CUUUGGU	ENSMUST00000078459.8|Memo1|ENSMUSG00000058704.10|mediator of cell motility 1	ENSMUST00000232989.2|Memo1|ENSMUSG00000058704.10|mediator of cell motility 1
mm39_v1_chr2_+_118756973_118757035	2.22769	CUUUGGU	ENSMUST00000099546.6|Chst14|ENSMUSG00000074916.6|carbohydrate sulfotransferase 14	ENSMUST00000110837.2|Chst14|ENSMUSG00000074916.6|carbohydrate sulfotransferase 14
mm39_v1_chr17_-_48235560_48235577	2.21888	CUUUGGU	ENSMUST00000113265.8|Foxp4|ENSMUSG00000023991.17|forkhead box P4
mm39_v1_chr12_-_102844537_102844709	2.21337	CUUUGGU	ENSMUST00000045652.8|Btbd7|ENSMUSG00000041702.8|BTB (POZ) domain containing 7	ENSMUST00000223554.2|Btbd7|ENSMUSG00000041702.8|BTB (POZ) domain containing 7
mm39_v1_chr17_-_14914484_14914503	2.19885	CUUUGGU	ENSMUST00000170872.3|Thbs2|ENSMUSG00000023885.10|thrombospondin 2
mm39_v1_chr18_+_14916295_14916316	2.18852	CUUUGGU	ENSMUST00000234789.2|Taf4b|ENSMUSG00000054321.8|TATA-box binding protein associated factor 4b	ENSMUST00000169862.2|Taf4b|ENSMUSG00000054321.8|TATA-box binding protein associated factor 4b
mm39_v1_chr6_+_70933434_70933590	2.18523	CUUUGGU	ENSMUST00000163089.2|Foxi3|ENSMUSG00000055874.7|forkhead box I3	ENSMUST00000069634.6|Foxi3|ENSMUSG00000055874.7|forkhead box I3
mm39_v1_chr11_-_78056347_78056415	2.17302	CUUUGGU	ENSMUST00000017530.4|Traf4|ENSMUSG00000017386.11|TNF receptor associated factor 4
mm39_v1_chr12_-_54703281_54703358	2.16891	CUUUGGU	ENSMUST00000056228.8|Sptssa|ENSMUSG00000044408.8|serine palmitoyltransferase, small subunit A
mm39_v1_chr1_-_119349969_119350021	2.15991	CUUUGGU	ENSMUST00000038765.6|Inhbb|ENSMUSG00000037035.6|inhibin beta-B
mm39_v1_chr14_+_59862751_59862767	2.15807	CUUUGGU	ENSMUST00000053949.7|Shisa2|ENSMUSG00000044461.7|shisa family member 2
mm39_v1_chr10_-_40018243_40018256	2.1562	CUUUGGU	ENSMUST00000092566.8|Slc16a10|ENSMUSG00000019838.12|solute carrier family 16 (monocarboxylic acid transporters), member 10	ENSMUST00000213488.2|Slc16a10|ENSMUSG00000019838.12|solute carrier family 16 (monocarboxylic acid transporters), member 10
mm39_v1_chr12_+_69418886_69418946	2.15381	CUUUGGU	ENSMUST00000050063.9|Arf6|ENSMUSG00000044147.9|ADP-ribosylation factor 6
mm39_v1_chrX_+_98179725_98179744	2.15315	CUUUGGU	ENSMUST00000052839.7|Efnb1|ENSMUSG00000031217.9|ephrin B1
mm39_v1_chr3_-_87081939_87082054	2.13205	CUUUGGU	ENSMUST00000159976.8|Kirrel|ENSMUSG00000041734.16|kirre like nephrin family adhesion molecule 1	ENSMUST00000107618.9|Kirrel|ENSMUSG00000041734.16|kirre like nephrin family adhesion molecule 1
mm39_v1_chr1_-_69724939_69724987	2.13004	CUUUGGU	ENSMUST00000027146.9|Ikzf2|ENSMUSG00000025997.14|IKAROS family zinc finger 2
mm39_v1_chr4_+_97665843_97665870	2.11665	CUUUGGU	ENSMUST00000075448.13|Nfia|ENSMUSG00000028565.19|nuclear factor I/A	ENSMUST00000092532.13|Nfia|ENSMUSG00000028565.19|nuclear factor I/A
mm39_v1_chr13_+_14129054_14129141	2.11653	CUUUGGU	ENSMUST00000099747.5|B3galnt2|ENSMUSG00000039242.11|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
mm39_v1_chr6_-_39183712_39183769	2.11313	CUUUGGU	ENSMUST00000002305.9|Kdm7a|ENSMUSG00000042599.9|lysine (K)-specific demethylase 7A
mm39_v1_chr7_-_110462446_110462465	2.10654	CUUUGGU	ENSMUST00000033050.5|Lyve1|ENSMUSG00000030787.5|lymphatic vessel endothelial hyaluronan receptor 1
mm39_v1_chrX_-_166165743_166165757	2.10338	CUUUGGU	ENSMUST00000026839.5|Prps2|ENSMUSG00000025742.6|phosphoribosyl pyrophosphate synthetase 2
mm39_v1_chr14_+_20979466_20979519	2.10165	CUUUGGU	ENSMUST00000022369.9|Vcl|ENSMUSG00000021823.11|vinculin
mm39_v1_chr14_-_47426863_47426877	2.09783	CUUUGGU	ENSMUST00000089959.7|Gch1|ENSMUSG00000037580.11|GTP cyclohydrolase 1
mm39_v1_chr11_+_32297803_32297865	2.09524	CUUUGGU	ENSMUST00000038753.6|Sh3pxd2b|ENSMUSG00000040711.9|SH3 and PX domains 2B	ENSMUST00000239041.2|Sh3pxd2b|ENSMUSG00000040711.9|SH3 and PX domains 2B
mm39_v1_chr4_-_151142351_151142444	2.08291	CUUUGGU	ENSMUST00000030797.4|Vamp3|ENSMUSG00000028955.4|vesicle-associated membrane protein 3
mm39_v1_chr4_+_123798625_123798643	2.08099	CUUUGGU	ENSMUST00000030400.14|Mycbp|ENSMUSG00000028647.14|MYC binding protein
mm39_v1_chrX_+_138511360_138511408	2.08092	CUUUGGU	ENSMUST00000113026.2|Rnf128|ENSMUSG00000031438.12|ring finger protein 128
mm39_v1_chr5_-_114518566_114518581	2.07544	CUUUGGU	ENSMUST00000102581.11|Kctd10|ENSMUSG00000001098.16|potassium channel tetramerisation domain containing 10
mm39_v1_chr5_+_146168020_146168195	2.07471	CUUUGGU	ENSMUST00000161181.8|Cdk8|ENSMUSG00000029635.16|cyclin-dependent kinase 8	ENSMUST00000161652.8|Cdk8|ENSMUSG00000029635.16|cyclin-dependent kinase 8	ENSMUST00000031640.15|Cdk8|ENSMUSG00000029635.16|cyclin-dependent kinase 8	ENSMUST00000159467.2|Cdk8|ENSMUSG00000029635.16|cyclin-dependent kinase 8
mm39_v1_chr10_-_120312374_120312388	2.06573	CUUUGGU	ENSMUST00000072777.14|Hmga2|ENSMUSG00000056758.15|high mobility group AT-hook 2	ENSMUST00000159699.2|Hmga2|ENSMUSG00000056758.15|high mobility group AT-hook 2
mm39_v1_chr15_+_10177709_10177741	2.06004	CUUUGGU	ENSMUST00000124470.8|Prlr|ENSMUSG00000005268.21|prolactin receptor
mm39_v1_chr18_+_64473091_64473114	2.0552	CUUUGGU	ENSMUST00000175965.10|Onecut2|ENSMUSG00000045991.20|one cut domain, family member 2
mm39_v1_chr16_+_42727926_42728047	2.05417	CUUUGGU	ENSMUST00000151244.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20	ENSMUST00000114694.9|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chr11_+_95010935_95010954	2.04561	CUUUGGU	ENSMUST00000092768.7|Dlx3|ENSMUSG00000001510.9|distal-less homeobox 3
mm39_v1_chr9_-_116004265_116004333	2.03836	CUUUGGU	ENSMUST00000061101.12|Tgfbr2|ENSMUSG00000032440.14|transforming growth factor, beta receptor II
mm39_v1_chr9_-_115139489_115139516	2.02504	CUUUGGU	ENSMUST00000035010.10|Stt3b|ENSMUSG00000032437.11|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)
mm39_v1_chr4_-_84593512_84593631	2.01979	CUUUGGU	ENSMUST00000176612.8|Bnc2|ENSMUSG00000028487.19|basonuclin 2
mm39_v1_chr7_+_86895851_86895877	2.01685	CUUUGGU	ENSMUST00000032781.14|Nox4|ENSMUSG00000030562.18|NADPH oxidase 4
mm39_v1_chr1_-_136888118_136888234	2.01215	CUUUGGU	ENSMUST00000192357.6|Nr5a2|ENSMUSG00000026398.15|nuclear receptor subfamily 5, group A, member 2	ENSMUST00000027649.14|Nr5a2|ENSMUSG00000026398.15|nuclear receptor subfamily 5, group A, member 2
mm39_v1_chr4_-_133480922_133480977	2.009	CUUUGGU	ENSMUST00000145664.9|Arid1a|ENSMUSG00000007880.17|AT rich interactive domain 1A (SWI-like)	ENSMUST00000105897.10|Arid1a|ENSMUSG00000007880.17|AT rich interactive domain 1A (SWI-like)
mm39_v1_chr3_+_63203516_63203615	2.00843	CUUUGGU	ENSMUST00000029400.7|Mme|ENSMUSG00000027820.13|membrane metallo endopeptidase
mm39_v1_chr2_-_34803988_34804055	2.00729	CUUUGGU	ENSMUST00000028232.7|Phf19|ENSMUSG00000026873.10|PHD finger protein 19	ENSMUST00000202907.2|Phf19|ENSMUSG00000026873.10|PHD finger protein 19
mm39_v1_chr9_+_30941924_30941997	2.00684	CUUUGGU	ENSMUST00000216649.2|Zbtb44|ENSMUSG00000047412.17|zinc finger and BTB domain containing 44	ENSMUST00000115222.10|Zbtb44|ENSMUSG00000047412.17|zinc finger and BTB domain containing 44
mm39_v1_chr9_-_32452885_32452898	2.00534	CUUUGGU	ENSMUST00000016231.14|Fli1|ENSMUSG00000016087.14|Friend leukemia integration 1
mm39_v1_chr3_+_97920819_97920863	2.0036	CUUUGGU	ENSMUST00000079812.8|Notch2|ENSMUSG00000027878.12|notch 2
mm39_v1_chr11_+_44508137_44508169	2.00341	CUUUGGU	ENSMUST00000109268.2|Ebf1|ENSMUSG00000057098.15|early B cell factor 1	ENSMUST00000101326.10|Ebf1|ENSMUSG00000057098.15|early B cell factor 1	ENSMUST00000081265.12|Ebf1|ENSMUSG00000057098.15|early B cell factor 1
mm39_v1_chr13_-_104057016_104057075	1.99658	CUUUGGU	ENSMUST00000022222.12|Erbin|ENSMUSG00000021709.15|Erbb2 interacting protein
mm39_v1_chr13_-_38712387_38712466	1.99165	CUUUGGU	ENSMUST00000035988.16|Txndc5|ENSMUSG00000038991.18|thioredoxin domain containing 5
mm39_v1_chr6_-_100264439_100264461	1.98881	CUUUGGU	ENSMUST00000101118.4|Rybp|ENSMUSG00000072872.4|RING1 and YY1 binding protein
mm39_v1_chr2_+_3714492_3714507	1.98744	CUUUGGU	ENSMUST00000027965.11|Fam107b|ENSMUSG00000026655.16|family with sequence similarity 107, member B
mm39_v1_chr7_-_34089109_34089120	1.98301	CUUUGGU	ENSMUST00000085585.12|Lsm14a|ENSMUSG00000066568.13|LSM14A mRNA processing body assembly factor
mm39_v1_chr9_-_8004586_8004632	1.98211	CUUUGGU	ENSMUST00000086580.12|Yap1|ENSMUSG00000053110.14|yes-associated protein 1	ENSMUST00000065353.13|Yap1|ENSMUSG00000053110.14|yes-associated protein 1
mm39_v1_chr8_+_96078886_96078957	1.97897	CUUUGGU	ENSMUST00000034243.7|Mmp15|ENSMUSG00000031790.9|matrix metallopeptidase 15
mm39_v1_chr11_-_47270201_47270349	1.9772	CUUUGGU	ENSMUST00000077221.6|Sgcd|ENSMUSG00000020354.16|sarcoglycan, delta (dystrophin-associated glycoprotein)
mm39_v1_chr1_-_190915441_190915537	1.97536	CUUUGGU	ENSMUST00000027941.14|Atf3|ENSMUSG00000026628.14|activating transcription factor 3
mm39_v1_chr13_-_89890609_89890634	1.97068	CUUUGGU	ENSMUST00000109546.9|Vcan|ENSMUSG00000021614.17|versican
mm39_v1_chr15_-_100952206_100952280	1.96768	CUUUGGU	ENSMUST00000178140.2|Fignl2|ENSMUSG00000095440.3|fidgetin-like 2
mm39_v1_chr9_-_96993169_96993214	1.95541	CUUUGGU	ENSMUST00000085206.11|Slc25a36|ENSMUSG00000032449.14|solute carrier family 25, member 36
mm39_v1_chr4_+_148025316_148025390	1.95456	CUUUGGU	ENSMUST00000103232.2|2510039O18Rik|ENSMUSG00000044496.7|RIKEN cDNA 2510039O18 gene
mm39_v1_chr2_-_73360069_73360080	1.95107	CUUUGGU	ENSMUST00000094681.11|Wipf1|ENSMUSG00000075284.11|WAS/WASL interacting protein family, member 1
mm39_v1_chr7_-_26928029_26928061	1.94707	CUUUGGU	ENSMUST00000003850.8|Itpkc|ENSMUSG00000003752.10|inositol 1,4,5-trisphosphate 3-kinase C
mm39_v1_chr7_+_88079465_88079495	1.93469	CUUUGGU	ENSMUST00000107256.4|Rab38|ENSMUSG00000030559.9|RAB38, member RAS oncogene family
mm39_v1_chr3_-_69767208_69767273	1.93047	CUUUGGU	ENSMUST00000171529.4|Sptssb|ENSMUSG00000043461.14|serine palmitoyltransferase, small subunit B	ENSMUST00000051239.13|Sptssb|ENSMUSG00000043461.14|serine palmitoyltransferase, small subunit B
mm39_v1_chr6_+_14901343_14901363	1.92512	CUUUGGU	ENSMUST00000115477.8|Foxp2|ENSMUSG00000029563.17|forkhead box P2
mm39_v1_chr11_+_60822859_60822921	1.91921	CUUUGGU	ENSMUST00000019076.10|Map2k3|ENSMUSG00000018932.10|mitogen-activated protein kinase kinase 3
mm39_v1_chr10_-_62067026_62067033	1.90965	CUUUGGU	ENSMUST00000047883.11|Tspan15|ENSMUSG00000037031.11|tetraspanin 15
mm39_v1_chr11_+_68858942_68859001	1.90343	CUUUGGU	ENSMUST00000102606.10|Slc25a35|ENSMUSG00000018740.15|solute carrier family 25, member 35	ENSMUST00000018884.6|Slc25a35|ENSMUSG00000018740.15|solute carrier family 25, member 35
mm39_v1_chr9_+_109704609_109704684	1.90341	CUUUGGU	ENSMUST00000094324.8|Cdc25a|ENSMUSG00000032477.15|cell division cycle 25A
mm39_v1_chr9_+_121946321_121946401	1.89488	CUUUGGU	ENSMUST00000119215.9|Snrk|ENSMUSG00000038145.18|SNF related kinase	ENSMUST00000146832.8|Snrk|ENSMUSG00000038145.18|SNF related kinase	ENSMUST00000118886.9|Snrk|ENSMUSG00000038145.18|SNF related kinase	ENSMUST00000120173.9|Snrk|ENSMUSG00000038145.18|SNF related kinase	ENSMUST00000139181.2|Snrk|ENSMUSG00000038145.18|SNF related kinase
mm39_v1_chr2_-_126718129_126718191	1.8943	CUUUGGU	ENSMUST00000103224.10|Trpm7|ENSMUSG00000027365.15|transient receptor potential cation channel, subfamily M, member 7
mm39_v1_chr4_+_63133639_63133672	1.89118	CUUUGGU	ENSMUST00000036300.13|Col27a1|ENSMUSG00000045672.16|collagen, type XXVII, alpha 1
mm39_v1_chr9_-_119151428_119151517	1.88442	CUUUGGU	ENSMUST00000040853.11|Oxsr1|ENSMUSG00000036737.13|oxidative-stress responsive 1
mm39_v1_chr17_-_66258110_66258221	1.87541	CUUUGGU	ENSMUST00000233580.2|Twsg1|ENSMUSG00000024098.7|twisted gastrulation BMP signaling modulator 1	ENSMUST00000024906.6|Twsg1|ENSMUSG00000024098.7|twisted gastrulation BMP signaling modulator 1
mm39_v1_chr12_+_105651643_105651689	1.87516	CUUUGGU	ENSMUST00000051934.7|Gskip|ENSMUSG00000044715.8|GSK3B interacting protein
mm39_v1_chr18_-_73836810_73836877	1.8677	CUUUGGU	ENSMUST00000025393.14|Smad4|ENSMUSG00000024515.14|SMAD family member 4
mm39_v1_chr1_-_165830160_165830182	1.86696	CUUUGGU	ENSMUST00000111429.11|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000176800.2|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000177358.8|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1
mm39_v1_chr7_+_65759198_65759263	1.85704	CUUUGGU	ENSMUST00000036372.8|Chsy1|ENSMUSG00000032640.11|chondroitin sulfate synthase 1
mm39_v1_chr15_-_35155896_35155959	1.85138	CUUUGGU	ENSMUST00000067033.8|Stk3|ENSMUSG00000022329.16|serine/threonine kinase 3	ENSMUST00000018476.14|Stk3|ENSMUSG00000022329.16|serine/threonine kinase 3
mm39_v1_chr8_-_84059048_84059121	1.84155	CUUUGGU	ENSMUST00000177594.8|Elmod2|ENSMUSG00000035151.13|ELMO/CED-12 domain containing 2	ENSMUST00000053902.4|Elmod2|ENSMUSG00000035151.13|ELMO/CED-12 domain containing 2
mm39_v1_chr17_+_56610321_56610349	1.84066	CUUUGGU	ENSMUST00000001258.15|Uhrf1|ENSMUSG00000001228.15|ubiquitin-like, containing PHD and RING finger domains, 1
mm39_v1_chr3_+_52175757_52175827	1.8339	CUUUGGU	ENSMUST00000053764.7|Foxo1|ENSMUSG00000044167.7|forkhead box O1
mm39_v1_chr3_-_117662575_117662592	1.82457	CUUUGGU	ENSMUST00000029639.12|Snx7|ENSMUSG00000028007.14|sorting nexin 7
mm39_v1_chr1_-_128520002_128520055	1.82344	CUUUGGU	ENSMUST00000052172.7|Cxcr4|ENSMUSG00000045382.7|chemokine (C-X-C motif) receptor 4	ENSMUST00000142893.2|Cxcr4|ENSMUSG00000045382.7|chemokine (C-X-C motif) receptor 4
mm39_v1_chr11_+_53991750_53991853	1.81833	CUUUGGU	ENSMUST00000093107.12|P4ha2|ENSMUSG00000018906.15|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	ENSMUST00000019050.12|P4ha2|ENSMUSG00000018906.15|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	ENSMUST00000174616.8|P4ha2|ENSMUSG00000018906.15|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	ENSMUST00000129499.8|P4ha2|ENSMUSG00000018906.15|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	ENSMUST00000126840.8|P4ha2|ENSMUSG00000018906.15|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
mm39_v1_chr6_-_5496261_5496316	1.81477	CUUUGGU	ENSMUST00000203347.3|Pdk4|ENSMUSG00000019577.7|pyruvate dehydrogenase kinase, isoenzyme 4	ENSMUST00000019721.7|Pdk4|ENSMUSG00000019577.7|pyruvate dehydrogenase kinase, isoenzyme 4
mm39_v1_chr4_-_134495234_134495335	1.81063	CUUUGGU	ENSMUST00000037828.8|Ldlrap1|ENSMUSG00000037295.8|low density lipoprotein receptor adaptor protein 1
mm39_v1_chr6_-_38853097_38853167	1.80841	CUUUGGU	ENSMUST00000161779.8|Hipk2|ENSMUSG00000061436.16|homeodomain interacting protein kinase 2
mm39_v1_chr10_-_34083570_34083711	1.79727	CUUUGGU	ENSMUST00000215547.2|Dse|ENSMUSG00000039497.9|dermatan sulfate epimerase	ENSMUST00000048010.9|Dse|ENSMUSG00000039497.9|dermatan sulfate epimerase
mm39_v1_chr2_-_62242562_62242581	1.78135	CUUUGGU	ENSMUST00000047812.8|Dpp4|ENSMUSG00000035000.9|dipeptidylpeptidase 4
mm39_v1_chr2_+_162773440_162773581	1.77731	CUUUGGU	ENSMUST00000130411.7|Srsf6|ENSMUSG00000016921.15|serine and arginine-rich splicing factor 6	ENSMUST00000126163.3|Srsf6|ENSMUSG00000016921.15|serine and arginine-rich splicing factor 6
mm39_v1_chr1_-_156301821_156301901	1.77033	CUUUGGU	ENSMUST00000188027.2|Soat1|ENSMUSG00000026600.13|sterol O-acyltransferase 1	ENSMUST00000187507.7|Soat1|ENSMUSG00000026600.13|sterol O-acyltransferase 1	ENSMUST00000189661.7|Soat1|ENSMUSG00000026600.13|sterol O-acyltransferase 1
mm39_v1_chr10_-_77002377_77002390	1.77018	CUUUGGU	ENSMUST00000081654.13|Col18a1|ENSMUSG00000001435.16|collagen, type XVIII, alpha 1
mm39_v1_chrX_-_105055486_105055512	1.76045	CUUUGGU	ENSMUST00000238718.2|Magt1|ENSMUSG00000031232.18|magnesium transporter 1	ENSMUST00000033583.14|Magt1|ENSMUSG00000031232.18|magnesium transporter 1	ENSMUST00000151689.9|Magt1|ENSMUSG00000031232.18|magnesium transporter 1
mm39_v1_chr10_+_43354807_43354859	1.75339	CUUUGGU	ENSMUST00000167488.9|Bend3|ENSMUSG00000038214.16|BEN domain containing 3
mm39_v1_chr8_-_107064615_107064640	1.74864	CUUUGGU	ENSMUST00000067512.8|Smpd3|ENSMUSG00000031906.10|sphingomyelin phosphodiesterase 3, neutral
mm39_v1_chrX_+_105070907_105070929	1.74244	CUUUGGU	ENSMUST00000055941.7|Atp7a|ENSMUSG00000033792.13|ATPase, Cu++ transporting, alpha polypeptide
mm39_v1_chr5_-_21087023_21087122	1.74148	CUUUGGU	ENSMUST00000118174.8|Phtf2|ENSMUSG00000039987.16|putative homeodomain transcription factor 2
mm39_v1_chr1_+_88998115_88998147	1.72269	CUUUGGU	ENSMUST00000066279.11|Sh3bp4|ENSMUSG00000036206.13|SH3-domain binding protein 4
mm39_v1_chr10_-_121312212_121312252	1.67295	CUUUGGU	ENSMUST00000026902.9|Rassf3|ENSMUSG00000025795.9|Ras association (RalGDS/AF-6) domain family member 3
mm39_v1_chr9_-_82857528_82857569	1.66444	CUUUGGU	ENSMUST00000034787.12|Phip|ENSMUSG00000032253.14|pleckstrin homology domain interacting protein
mm39_v1_chr2_-_140513382_140513399	1.6607	CUUUGGU	ENSMUST00000110057.3|Flrt3|ENSMUSG00000051379.13|fibronectin leucine rich transmembrane protein 3
mm39_v1_chr2_-_180929828_180929828	1.65761	CUUUGGU	ENSMUST00000049032.13|Gmeb2|ENSMUSG00000038705.14|glucocorticoid modulatory element binding protein 2
mm39_v1_chr19_-_17814984_17815006	1.65605	CUUUGGU	ENSMUST00000025618.16|Pcsk5|ENSMUSG00000024713.17|proprotein convertase subtilisin/kexin type 5	ENSMUST00000050715.10|Pcsk5|ENSMUSG00000024713.17|proprotein convertase subtilisin/kexin type 5
mm39_v1_chr4_-_44167509_44167609	1.6495	CUUUGGU	ENSMUST00000098098.9|Rnf38|ENSMUSG00000035696.16|ring finger protein 38
mm39_v1_chr14_+_117163215_117163348	1.64586	CUUUGGU	ENSMUST00000078849.12|Gpc6|ENSMUSG00000058571.12|glypican 6
mm39_v1_chr4_-_41464816_41464903	1.62727	CUUUGGU	ENSMUST00000108055.9|Kif24|ENSMUSG00000028438.17|kinesin family member 24	ENSMUST00000154535.8|Kif24|ENSMUSG00000028438.17|kinesin family member 24	ENSMUST00000030148.6|Kif24|ENSMUSG00000028438.17|kinesin family member 24
mm39_v1_chr6_-_128120488_128120556	1.62113	CUUUGGU	ENSMUST00000145940.8|Tspan9|ENSMUSG00000030352.16|tetraspanin 9	ENSMUST00000032503.12|Tspan9|ENSMUSG00000030352.16|tetraspanin 9	ENSMUST00000154375.8|Tspan9|ENSMUSG00000030352.16|tetraspanin 9	ENSMUST00000112173.8|Tspan9|ENSMUSG00000030352.16|tetraspanin 9
mm39_v1_chr15_+_100125693_100125705	1.61523	CUUUGGU	ENSMUST00000023769.11|Atf1|ENSMUSG00000023027.14|activating transcription factor 1
mm39_v1_chr6_+_54793894_54793905	1.60429	CUUUGGU	ENSMUST00000079869.13|Znrf2|ENSMUSG00000058446.15|zinc and ring finger 2
mm39_v1_chr14_+_34395845_34395890	1.59123	CUUUGGU	ENSMUST00000048263.14|Wapl|ENSMUSG00000041408.19|WAPL cohesin release factor
mm39_v1_chr14_+_119175328_119175404	1.5911	CUUUGGU	ENSMUST00000022734.9|Dnajc3|ENSMUSG00000022136.9|DnaJ heat shock protein family (Hsp40) member C3
mm39_v1_chr13_-_114595475_114595493	1.59041	CUUUGGU	ENSMUST00000022287.8|Fst|ENSMUSG00000021765.10|follistatin	ENSMUST00000223640.3|Fst|ENSMUSG00000021765.10|follistatin
mm39_v1_chr9_+_72439496_72439553	1.58547	CUUUGGU	ENSMUST00000163401.9|Rfx7|ENSMUSG00000037674.16|regulatory factor X, 7	ENSMUST00000093820.10|Rfx7|ENSMUSG00000037674.16|regulatory factor X, 7
mm39_v1_chr10_-_62363217_62363241	1.57791	CUUUGGU	ENSMUST00000160987.8|Srgn|ENSMUSG00000020077.15|serglycin
mm39_v1_chr2_+_120398133_120398158	1.57704	CUUUGGU	ENSMUST00000110711.9|Snap23|ENSMUSG00000027287.15|synaptosomal-associated protein 23
mm39_v1_chr7_-_116042674_116042698	1.53359	CUUUGGU	ENSMUST00000170430.3|Pik3c2a|ENSMUSG00000030660.10|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha	ENSMUST00000206219.2|Pik3c2a|ENSMUSG00000030660.10|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha
mm39_v1_chr11_-_52173391_52173405	1.53207	CUUUGGU	ENSMUST00000086844.10|Tcf7|ENSMUSG00000000782.17|transcription factor 7, T cell specific
mm39_v1_chr15_+_12321502_12321552	1.52318	CUUUGGU	ENSMUST00000059680.7|Golph3|ENSMUSG00000022200.9|golgi phosphoprotein 3
mm39_v1_chr6_-_30304512_30304569	1.50669	CUUUGGU	ENSMUST00000094543.3|Ube2h|ENSMUSG00000039159.17|ubiquitin-conjugating enzyme E2H	ENSMUST00000102993.10|Ube2h|ENSMUSG00000039159.17|ubiquitin-conjugating enzyme E2H
mm39_v1_chr2_+_27567213_27567241	1.5063	CUUUGGU	ENSMUST00000077257.12|Rxra|ENSMUSG00000015846.16|retinoid X receptor alpha
mm39_v1_chr19_-_3625698_3625756	1.50462	CUUUGGU	ENSMUST00000172362.3|Ppp6r3|ENSMUSG00000024908.16|protein phosphatase 6, regulatory subunit 3	ENSMUST00000025846.16|Ppp6r3|ENSMUSG00000024908.16|protein phosphatase 6, regulatory subunit 3	ENSMUST00000226109.2|Ppp6r3|ENSMUSG00000024908.16|protein phosphatase 6, regulatory subunit 3	ENSMUST00000113997.9|Ppp6r3|ENSMUSG00000024908.16|protein phosphatase 6, regulatory subunit 3
mm39_v1_chr2_+_29692638_29692660	1.48564	CUUUGGU	ENSMUST00000080065.3|Slc27a4|ENSMUSG00000059316.3|solute carrier family 27 (fatty acid transporter), member 4
mm39_v1_chr1_-_143578542_143578631	1.48441	CUUUGGU	ENSMUST00000018337.9|Cdc73|ENSMUSG00000026361.10|cell division cycle 73, Paf1/RNA polymerase II complex component
mm39_v1_chr9_-_113537277_113537327	1.47338	CUUUGGU	ENSMUST00000111861.4|Pdcd6ip|ENSMUSG00000032504.16|programmed cell death 6 interacting protein	ENSMUST00000035086.13|Pdcd6ip|ENSMUSG00000032504.16|programmed cell death 6 interacting protein
mm39_v1_chr14_-_103220066_103220081	1.46604	CUUUGGU	ENSMUST00000184744.2|Kctd12|ENSMUSG00000098557.2|potassium channel tetramerisation domain containing 12
mm39_v1_chr2_+_128659997_128660061	1.46546	CUUUGGU	ENSMUST00000110325.8|Tmem87b|ENSMUSG00000014353.16|transmembrane protein 87B
mm39_v1_chr1_-_51517548_51517584	1.46445	CUUUGGU	ENSMUST00000027279.12|Nabp1|ENSMUSG00000026107.12|nucleic acid binding protein 1	ENSMUST00000186684.7|Nabp1|ENSMUSG00000026107.12|nucleic acid binding protein 1	ENSMUST00000188204.7|Nabp1|ENSMUSG00000026107.12|nucleic acid binding protein 1	ENSMUST00000185534.2|Nabp1|ENSMUSG00000026107.12|nucleic acid binding protein 1	ENSMUST00000188051.7|Nabp1|ENSMUSG00000026107.12|nucleic acid binding protein 1
mm39_v1_chr10_-_66932685_66932738	1.46332	CUUUGGU	ENSMUST00000020023.9|Reep3|ENSMUSG00000019873.9|receptor accessory protein 3
mm39_v1_chr4_-_43562397_43562438	1.4632	CUUUGGU	ENSMUST00000030187.14|Tln1|ENSMUSG00000028465.17|talin 1
mm39_v1_chr12_+_76417040_76417040	1.46298	CUUUGGU	ENSMUST00000042779.4|Zbtb1|ENSMUSG00000033454.7|zinc finger and BTB domain containing 1
mm39_v1_chr6_-_83294526_83294593	1.45194	CUUUGGU	ENSMUST00000005810.9|Mthfd2|ENSMUSG00000005667.9|methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase
mm39_v1_chr11_+_35660288_35660311	1.44804	CUUUGGU	ENSMUST00000018990.8|Pank3|ENSMUSG00000018846.9|pantothenate kinase 3
mm39_v1_chr3_-_104771716_104771821	1.43194	CUUUGGU	ENSMUST00000195912.2|Capza1|ENSMUSG00000070372.12|capping protein (actin filament) muscle Z-line, alpha 1	ENSMUST00000094028.10|Capza1|ENSMUSG00000070372.12|capping protein (actin filament) muscle Z-line, alpha 1
mm39_v1_chr3_+_109247938_109247976	1.43142	CUUUGGU	ENSMUST00000046864.14|Vav3|ENSMUSG00000033721.17|vav 3 oncogene
mm39_v1_chr9_+_114560235_114560308	1.43012	CUUUGGU	ENSMUST00000035007.10|Cmtm6|ENSMUSG00000032434.10|CKLF-like MARVEL transmembrane domain containing 6
mm39_v1_chr9_+_96078340_96078406	1.42731	CUUUGGU	ENSMUST00000034982.16|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000188008.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000188750.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000185644.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2
mm39_v1_chr11_-_63813083_63813119	1.42687	CUUUGGU	ENSMUST00000094103.4|Hs3st3b1|ENSMUSG00000070407.6|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
mm39_v1_chr10_+_80330669_80330714	1.42362	CUUUGGU	ENSMUST00000051773.9|Onecut3|ENSMUSG00000045518.9|one cut domain, family member 3
mm39_v1_chr1_+_59952131_59952186	1.4172	CUUUGGU	ENSMUST00000036540.12|Fam117b|ENSMUSG00000041040.13|family with sequence similarity 117, member B
mm39_v1_chr11_-_40646090_40646138	1.41001	CUUUGGU	ENSMUST00000020576.8|Ccng1|ENSMUSG00000020326.8|cyclin G1
mm39_v1_chr10_+_69932930_69933066	1.40939	CUUUGGU	ENSMUST00000147545.8|Ccdc6|ENSMUSG00000048701.14|coiled-coil domain containing 6
mm39_v1_chr7_+_96730763_96730793	1.40018	CUUUGGU	ENSMUST00000004622.7|Gab2|ENSMUSG00000004508.7|growth factor receptor bound protein 2-associated protein 2
mm39_v1_chr10_-_118705029_118705091	1.39838	CUUUGGU	ENSMUST00000004281.10|Dyrk2|ENSMUSG00000028630.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
mm39_v1_chr11_+_67090878_67090964	1.39481	CUUUGGU	ENSMUST00000124516.8|Myh1|ENSMUSG00000056328.15|myosin, heavy polypeptide 1, skeletal muscle, adult	ENSMUST00000018637.15|Myh1|ENSMUSG00000056328.15|myosin, heavy polypeptide 1, skeletal muscle, adult	ENSMUST00000129018.8|Myh1|ENSMUSG00000056328.15|myosin, heavy polypeptide 1, skeletal muscle, adult
mm39_v1_chr18_+_61688329_61688361	1.39273	CUUUGGU	ENSMUST00000165123.8|Csnk1a1|ENSMUSG00000024576.15|casein kinase 1, alpha 1
mm39_v1_chrX_-_50106844_50106910	1.3841	CUUUGGU	ENSMUST00000053593.8|Rap2c|ENSMUSG00000050029.8|RAP2C, member of RAS oncogene family
mm39_v1_chr4_+_46450892_46450903	1.38329	CUUUGGU	ENSMUST00000102926.5|Anp32b|ENSMUSG00000028333.11|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
mm39_v1_chr9_-_79625800_79625854	1.37257	CUUUGGU	ENSMUST00000071750.13|Col12a1|ENSMUSG00000032332.18|collagen, type XII, alpha 1
mm39_v1_chr18_+_36414122_36414204	1.36779	CUUUGGU	ENSMUST00000051301.6|Pura|ENSMUSG00000043991.6|purine rich element binding protein A
mm39_v1_chr15_-_53209513_53209565	1.36346	CUUUGGU	ENSMUST00000077273.9|Ext1|ENSMUSG00000061731.10|exostosin glycosyltransferase 1
mm39_v1_chr9_+_72569628_72569697	1.34719	CUUUGGU	ENSMUST00000034740.15|Nedd4|ENSMUSG00000032216.16|neural precursor cell expressed, developmentally down-regulated 4
mm39_v1_chr13_-_63713549_63713549	1.34523	CUUUGGU	ENSMUST00000021921.11|Ptch1|ENSMUSG00000021466.13|patched 1
mm39_v1_chr10_-_92558219_92558286	1.33866	CUUUGGU	ENSMUST00000020163.7|Nedd1|ENSMUSG00000019988.8|neural precursor cell expressed, developmentally down-regulated gene 1
mm39_v1_chr4_-_87951565_87951610	1.33184	CUUUGGU	ENSMUST00000078090.12|Mllt3|ENSMUSG00000028496.18|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
mm39_v1_chr10_+_127575407_127575457	1.30058	CUUUGGU	ENSMUST00000054287.9|Zbtb39|ENSMUSG00000044617.9|zinc finger and BTB domain containing 39
mm39_v1_chrX_+_72030945_72030972	1.29452	CUUUGGU	ENSMUST00000164800.8|Zfp185|ENSMUSG00000031351.16|zinc finger protein 185	ENSMUST00000114546.9|Zfp185|ENSMUSG00000031351.16|zinc finger protein 185
mm39_v1_chr4_+_132857816_132857901	1.29188	CUUUGGU	ENSMUST00000084241.12|Wasf2|ENSMUSG00000028868.14|WASP family, member 2	ENSMUST00000138831.2|Wasf2|ENSMUSG00000028868.14|WASP family, member 2
mm39_v1_chr17_-_63188139_63188352	1.28955	CUUUGGU	ENSMUST00000078839.5|Efna5|ENSMUSG00000048915.13|ephrin A5	ENSMUST00000076840.12|Efna5|ENSMUSG00000048915.13|ephrin A5
mm39_v1_chr13_+_54769592_54769606	1.28663	CUUUGGU	ENSMUST00000126071.9|Faf2|ENSMUSG00000025873.17|Fas associated factor family member 2
mm39_v1_chr1_+_86454431_86454459	1.28023	CUUUGGU	ENSMUST00000045897.15|Ptma|ENSMUSG00000026238.15|prothymosin alpha	ENSMUST00000186255.7|Ptma|ENSMUSG00000026238.15|prothymosin alpha	ENSMUST00000188699.7|Ptma|ENSMUSG00000026238.15|prothymosin alpha
mm39_v1_chr16_+_58228806_58228886	1.27335	CUUUGGU	ENSMUST00000046663.8|Dcbld2|ENSMUSG00000035107.14|discoidin, CUB and LCCL domain containing 2
mm39_v1_chr16_-_31898088_31898178	1.26837	CUUUGGU	ENSMUST00000023467.9|Pak2|ENSMUSG00000022781.9|p21 (RAC1) activated kinase 2
mm39_v1_chr7_-_71956332_71956395	1.26387	CUUUGGU	ENSMUST00000079323.8|Mctp2|ENSMUSG00000032776.10|multiple C2 domains, transmembrane 2
mm39_v1_chr15_-_96358612_96358724	1.26326	CUUUGGU	ENSMUST00000047835.8|Scaf11|ENSMUSG00000033228.9|SR-related CTD-associated factor 11
mm39_v1_chrX_-_51254129_51254157	1.25439	CUUUGGU	ENSMUST00000033450.3|Gpc4|ENSMUSG00000031119.5|glypican 4
mm39_v1_chr5_-_64126194_64126247	1.24172	CUUUGGU	ENSMUST00000154169.4|Rell1|ENSMUSG00000047881.15|RELT-like 1
mm39_v1_chr3_-_135397298_135397309	1.22984	CUUUGGU	ENSMUST00000029812.14|Nfkb1|ENSMUSG00000028163.18|nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105
mm39_v1_chr17_+_5045178_5045349	1.2291	CUUUGGU	ENSMUST00000092723.11|Arid1b|ENSMUSG00000069729.15|AT rich interactive domain 1B (SWI-like)	ENSMUST00000232180.2|Arid1b|ENSMUSG00000069729.15|AT rich interactive domain 1B (SWI-like)	ENSMUST00000115797.9|Arid1b|ENSMUSG00000069729.15|AT rich interactive domain 1B (SWI-like)
mm39_v1_chrX_+_135950334_135950415	1.22463	CUUUGGU	ENSMUST00000047852.8|Fam199x|ENSMUSG00000042595.8|family with sequence similarity 199, X-linked
mm39_v1_chr2_-_168608949_168608965	1.22358	CUUUGGU	ENSMUST00000075044.10|Sall4|ENSMUSG00000027547.18|spalt like transcription factor 4
mm39_v1_chr7_-_83533497_83533523	1.2167	CUUUGGU	ENSMUST00000094216.5|Tlnrd1|ENSMUSG00000070462.5|talin rod domain containing 1
mm39_v1_chr5_+_123532819_123532892	1.21588	CUUUGGU	ENSMUST00000111596.8|Mlxip|ENSMUSG00000038342.16|MLX interacting protein	ENSMUST00000068237.12|Mlxip|ENSMUSG00000038342.16|MLX interacting protein
mm39_v1_chr10_+_126814542_126814618	1.20385	CUUUGGU	ENSMUST00000105256.10|Ctdsp2|ENSMUSG00000078429.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
mm39_v1_chr3_+_79536378_79536442	1.19989	CUUUGGU	ENSMUST00000029388.10|4930579G24Rik|ENSMUSG00000027811.10|RIKEN cDNA 4930579G24 gene
mm39_v1_chr11_-_120472379_120472452	1.19731	CUUUGGU	ENSMUST00000106197.10|Arhgdia|ENSMUSG00000025132.14|Rho GDP dissociation inhibitor (GDI) alpha
mm39_v1_chr18_-_82710859_82711058	1.19113	CUUUGGU	ENSMUST00000182122.8|Zfp236|ENSMUSG00000041258.19|zinc finger protein 236	ENSMUST00000171071.9|Zfp236|ENSMUSG00000041258.19|zinc finger protein 236
mm39_v1_chr19_-_32365862_32365912	1.191	CUUUGGU	ENSMUST00000099514.10|Sgms1|ENSMUSG00000040451.19|sphingomyelin synthase 1
mm39_v1_chr8_+_129085719_129085787	1.19071	CUUUGGU	ENSMUST00000026917.10|Nrp1|ENSMUSG00000025810.10|neuropilin 1
mm39_v1_chr15_+_88746380_88746396	1.18595	CUUUGGU	ENSMUST00000042818.11|Pim3|ENSMUSG00000035828.12|proviral integration site 3
mm39_v1_chr15_+_85942928_85942981	1.18048	CUUUGGU	ENSMUST00000138134.8|Gramd4|ENSMUSG00000035900.19|GRAM domain containing 4
mm39_v1_chr9_-_117081518_117081557	1.17114	CUUUGGU	ENSMUST00000111773.10|Rbms3|ENSMUSG00000039607.18|RNA binding motif, single stranded interacting protein	ENSMUST00000068962.14|Rbms3|ENSMUSG00000039607.18|RNA binding motif, single stranded interacting protein	ENSMUST00000044901.14|Rbms3|ENSMUSG00000039607.18|RNA binding motif, single stranded interacting protein
mm39_v1_chr5_-_114911548_114911577	1.16854	CUUUGGU	ENSMUST00000178440.8|Git2|ENSMUSG00000041890.18|GIT ArfGAP 2	ENSMUST00000043283.14|Git2|ENSMUSG00000041890.18|GIT ArfGAP 2	ENSMUST00000112185.9|Git2|ENSMUSG00000041890.18|GIT ArfGAP 2	ENSMUST00000155908.8|Git2|ENSMUSG00000041890.18|GIT ArfGAP 2
mm39_v1_chr6_+_72391283_72391302	1.16785	CUUUGGU	ENSMUST00000065906.9|Ggcx|ENSMUSG00000053460.9|gamma-glutamyl carboxylase
mm39_v1_chrX_+_13147209_13147270	1.16464	CUUUGGU	ENSMUST00000000804.7|Ddx3x|ENSMUSG00000000787.13|DEAD box helicase 3, X-linked
mm39_v1_chr8_-_120828211_120828246	1.14237	CUUUGGU	ENSMUST00000034280.9|Zdhhc7|ENSMUSG00000031823.15|zinc finger, DHHC domain containing 7
mm39_v1_chr5_+_102629240_102629257	1.14176	CUUUGGU	ENSMUST00000073302.12|Arhgap24|ENSMUSG00000057315.15|Rho GTPase activating protein 24	ENSMUST00000094559.9|Arhgap24|ENSMUSG00000057315.15|Rho GTPase activating protein 24
mm39_v1_chr13_+_23715220_23715265	1.13896	CUUUGGU	ENSMUST00000102972.6|H4c8|ENSMUSG00000060981.8|H4 clustered histone 8
mm39_v1_chr15_+_58761057_58761080	1.13359	CUUUGGU	ENSMUST00000036904.7|Rnf139|ENSMUSG00000037075.8|ring finger protein 139
mm39_v1_chr3_+_19698631_19698638	1.12022	CUUUGGU	ENSMUST00000029139.9|Trim55|ENSMUSG00000060913.7|tripartite motif-containing 55
mm39_v1_chr16_+_91855158_91855216	1.11736	CUUUGGU	ENSMUST00000047429.9|Mrps6|ENSMUSG00000039680.11|mitochondrial ribosomal protein S6	ENSMUST00000232677.2|Gm49711|ENSMUSG00000116930.2|predicted gene, 49711	ENSMUST00000113975.3|Slc5a3|ENSMUSG00000089774.3|solute carrier family 5 (inositol transporters), member 3
mm39_v1_chr11_+_78079243_78079311	1.11067	CUUUGGU	ENSMUST00000002128.14|Rab34|ENSMUSG00000002059.19|RAB34, member RAS oncogene family	ENSMUST00000150941.8|Rab34|ENSMUSG00000002059.19|RAB34, member RAS oncogene family
mm39_v1_chr3_+_20111958_20112024	1.10931	CUUUGGU	ENSMUST00000002502.12|Hltf|ENSMUSG00000002428.13|helicase-like transcription factor
mm39_v1_chr1_-_119432455_119432526	1.10896	CUUUGGU	ENSMUST00000004565.15|Ralb|ENSMUSG00000004451.15|v-ral simian leukemia viral oncogene B
mm39_v1_chr4_+_43957401_43957498	1.10021	CUUUGGU	ENSMUST00000030202.14|Glipr2|ENSMUSG00000028480.15|GLI pathogenesis-related 2
mm39_v1_chr11_-_99121822_99121844	1.09962	CUUUGGU	ENSMUST00000103133.4|Smarce1|ENSMUSG00000037935.17|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
mm39_v1_chr5_+_33492853_33492922	1.09168	CUUUGGU	ENSMUST00000114449.7|Maea|ENSMUSG00000079562.8|macrophage erythroblast attacher	ENSMUST00000200716.3|Maea|ENSMUSG00000079562.8|macrophage erythroblast attacher
mm39_v1_chr16_-_92622972_92623037	1.09005	CUUUGGU	ENSMUST00000023673.14|Runx1|ENSMUSG00000022952.18|runt related transcription factor 1
mm39_v1_chr9_+_108867633_108867714	1.08354	CUUUGGU	ENSMUST00000112059.10|Shisa5|ENSMUSG00000025647.17|shisa family member 5	ENSMUST00000026737.12|Shisa5|ENSMUSG00000025647.17|shisa family member 5
mm39_v1_chr6_-_99243455_99243501	1.07747	CUUUGGU	ENSMUST00000113326.9|Foxp1|ENSMUSG00000030067.18|forkhead box P1
mm39_v1_chr2_+_157266175_157266243	1.07669	CUUUGGU	ENSMUST00000029175.14|Src|ENSMUSG00000027646.16|Rous sarcoma oncogene	ENSMUST00000092576.11|Src|ENSMUSG00000027646.16|Rous sarcoma oncogene
mm39_v1_chr3_-_104960437_104960467	1.07219	CUUUGGU	ENSMUST00000077548.12|Cttnbp2nl|ENSMUSG00000062127.12|CTTNBP2 N-terminal like
mm39_v1_chr1_+_139349912_139350120	1.06987	CUUUGGU	ENSMUST00000200243.5|Zbtb41|ENSMUSG00000033964.13|zinc finger and BTB domain containing 41	ENSMUST00000039867.10|Zbtb41|ENSMUSG00000033964.13|zinc finger and BTB domain containing 41
mm39_v1_chr4_-_141412910_141412910	1.06688	CUUUGGU	ENSMUST00000105782.2|Rsc1a1|ENSMUSG00000040715.13|regulatory solute carrier protein, family 1, member 1
mm39_v1_chr17_-_35827676_35827732	1.06317	CUUUGGU	ENSMUST00000160885.2|Tcf19|ENSMUSG00000050410.16|transcription factor 19	ENSMUST00000159009.2|Tcf19|ENSMUSG00000050410.16|transcription factor 19	ENSMUST00000161012.8|Tcf19|ENSMUSG00000050410.16|transcription factor 19
mm39_v1_chr1_+_89382491_89382643	1.05846	CUUUGGU	ENSMUST00000027521.15|Agap1|ENSMUSG00000055013.17|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	ENSMUST00000190096.7|Agap1|ENSMUSG00000055013.17|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm39_v1_chr8_+_110944575_110944637	1.05816	CUUUGGU	ENSMUST00000056972.6|Cmtr2|ENSMUSG00000046441.6|cap methyltransferase 2
mm39_v1_chr13_+_104424359_104424432	1.05171	CUUUGGU	ENSMUST00000065766.7|Adamts6|ENSMUSG00000046169.11|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
mm39_v1_chr9_-_114393406_114393437	1.05148	CUUUGGU	ENSMUST00000111816.3|Trim71|ENSMUSG00000079259.3|tripartite motif-containing 71
mm39_v1_chr15_-_10713621_10713632	1.04752	CUUUGGU	ENSMUST00000090339.11|Rai14|ENSMUSG00000022246.15|retinoic acid induced 14
mm39_v1_chr4_-_82777746_82777917	1.03985	CUUUGGU	ENSMUST00000156055.2|Zdhhc21|ENSMUSG00000028403.16|zinc finger, DHHC domain containing 21	ENSMUST00000030110.15|Zdhhc21|ENSMUSG00000028403.16|zinc finger, DHHC domain containing 21
mm39_v1_chr11_+_105975403_105975449	1.03964	CUUUGGU	ENSMUST00000002044.10|Map3k3|ENSMUSG00000020700.12|mitogen-activated protein kinase kinase kinase 3
mm39_v1_chr3_-_103698853_103698879	1.02826	CUUUGGU	ENSMUST00000118317.8|Hipk1|ENSMUSG00000008730.18|homeodomain interacting protein kinase 1
mm39_v1_chr9_+_32607301_32607417	1.02825	CUUUGGU	ENSMUST00000034534.13|Ets1|ENSMUSG00000032035.17|E26 avian leukemia oncogene 1, 5' domain	ENSMUST00000050797.14|Ets1|ENSMUSG00000032035.17|E26 avian leukemia oncogene 1, 5' domain	ENSMUST00000184887.2|Ets1|ENSMUSG00000032035.17|E26 avian leukemia oncogene 1, 5' domain
mm39_v1_chr8_+_12807001_12807028	1.02525	CUUUGGU	ENSMUST00000033818.10|Atp11a|ENSMUSG00000031441.16|ATPase, class VI, type 11A	ENSMUST00000091237.12|Atp11a|ENSMUSG00000031441.16|ATPase, class VI, type 11A
mm39_v1_chr15_-_103148239_103148297	1.01754	CUUUGGU	ENSMUST00000118152.8|Cbx5|ENSMUSG00000009575.15|chromobox 5
mm39_v1_chr12_+_80837284_80837348	1.01751	CUUUGGU	ENSMUST00000220238.2|Susd6|ENSMUSG00000021133.10|sushi domain containing 6	ENSMUST00000068519.7|Susd6|ENSMUSG00000021133.10|sushi domain containing 6
mm39_v1_chr4_+_62883796_62883854	1.00199	CUUUGGU	ENSMUST00000030043.13|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618	ENSMUST00000107415.8|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618	ENSMUST00000064814.6|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618
mm39_v1_chr14_-_58127698_58127777	0.996766	CUUUGGU	ENSMUST00000089473.5|Zdhhc20|ENSMUSG00000021969.9|zinc finger, DHHC domain containing 20
mm39_v1_chr6_-_50359797_50359829	0.995955	CUUUGGU	ENSMUST00000114468.9|Osbpl3|ENSMUSG00000029822.16|oxysterol binding protein-like 3
mm39_v1_chr6_-_99643723_99643784	0.98553	CUUUGGU	ENSMUST00000032151.3|Eif4e3|ENSMUSG00000093661.2|eukaryotic translation initiation factor 4E member 3
mm39_v1_chr14_-_55019387_55019411	0.976938	CUUUGGU	ENSMUST00000022787.8|Slc7a8|ENSMUSG00000022180.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8
mm39_v1_chr14_-_103336990_103337007	0.966675	CUUUGGU	ENSMUST00000022720.15|Fbxl3|ENSMUSG00000022124.16|F-box and leucine-rich repeat protein 3	ENSMUST00000144141.8|Fbxl3|ENSMUSG00000022124.16|F-box and leucine-rich repeat protein 3
mm39_v1_chr4_-_140867038_140867083	0.955006	CUUUGGU	ENSMUST00000148204.8|Szrd1|ENSMUSG00000040842.18|SUZ RNA binding domain containing 1	ENSMUST00000102487.4|Szrd1|ENSMUSG00000040842.18|SUZ RNA binding domain containing 1
mm39_v1_chr14_-_45626237_45626418	0.953198	CUUUGGU	ENSMUST00000227865.2|Gnpnat1|ENSMUSG00000037722.9|glucosamine-phosphate N-acetyltransferase 1	ENSMUST00000226856.2|Gnpnat1|ENSMUSG00000037722.9|glucosamine-phosphate N-acetyltransferase 1	ENSMUST00000226276.2|Gnpnat1|ENSMUSG00000037722.9|glucosamine-phosphate N-acetyltransferase 1	ENSMUST00000046191.9|Gnpnat1|ENSMUSG00000037722.9|glucosamine-phosphate N-acetyltransferase 1
mm39_v1_chr13_-_64422693_64422761	0.950669	CUUUGGU	ENSMUST00000109770.2|Cdc14b|ENSMUSG00000033102.16|CDC14 cell division cycle 14B
mm39_v1_chr1_-_165762469_165762605	0.949054	CUUUGGU	ENSMUST00000069609.12|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000111427.9|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000111426.11|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1
mm39_v1_chr16_+_27207599_27207619	0.937422	CUUUGGU	ENSMUST00000239351.2|Ccdc50|ENSMUSG00000038127.16|coiled-coil domain containing 50	ENSMUST00000100026.10|Ccdc50|ENSMUSG00000038127.16|coiled-coil domain containing 50
mm39_v1_chr7_-_128342158_128342238	0.934819	CUUUGGU	ENSMUST00000119081.2|Mcmbp|ENSMUSG00000048170.15|minichromosome maintenance complex binding protein	ENSMUST00000057557.14|Mcmbp|ENSMUSG00000048170.15|minichromosome maintenance complex binding protein
mm39_v1_chr3_+_58322119_58322161	0.934096	CUUUGGU	ENSMUST00000099090.7|Tsc22d2|ENSMUSG00000027806.10|TSC22 domain family, member 2	ENSMUST00000199164.2|Tsc22d2|ENSMUSG00000027806.10|TSC22 domain family, member 2
mm39_v1_chr2_-_26393826_26393849	0.933759	CUUUGGU	ENSMUST00000028288.5|Notch1|ENSMUSG00000026923.16|notch 1
mm39_v1_chr4_-_45530330_45530330	0.930775	CUUUGGU	ENSMUST00000061986.12|Shb|ENSMUSG00000044813.16|src homology 2 domain-containing transforming protein B
mm39_v1_chr1_-_95595280_95595323	0.927321	CUUUGGU	ENSMUST00000043336.11|St8sia4|ENSMUSG00000040710.11|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm39_v1_chr2_+_30282266_30282317	0.925787	CUUUGGU	ENSMUST00000028209.15|Dolpp1|ENSMUSG00000026856.15|dolichyl pyrophosphate phosphatase 1
mm39_v1_chr2_-_59955995_59956119	0.916462	CUUUGGU	ENSMUST00000112550.8|Baz2b|ENSMUSG00000026987.17|bromodomain adjacent to zinc finger domain, 2B
mm39_v1_chr1_+_36510670_36510701	0.914334	CUUUGGU	ENSMUST00000153128.2|Cnnm4|ENSMUSG00000037408.11|cyclin M4
mm39_v1_chr10_+_128212953_128213024	0.904444	CUUUGGU	ENSMUST00000014642.10|Ankrd52|ENSMUSG00000014498.10|ankyrin repeat domain 52
mm39_v1_chr3_+_80943667_80943723	0.903277	CUUUGGU	ENSMUST00000029652.4|Pdgfc|ENSMUSG00000028019.10|platelet-derived growth factor, C polypeptide
mm39_v1_chr17_+_66090336_66090594	0.8933	CUUUGGU	ENSMUST00000073104.11|Ppp4r1|ENSMUSG00000061950.18|protein phosphatase 4, regulatory subunit 1	ENSMUST00000160664.8|Ppp4r1|ENSMUSG00000061950.18|protein phosphatase 4, regulatory subunit 1	ENSMUST00000162272.2|Ppp4r1|ENSMUSG00000061950.18|protein phosphatase 4, regulatory subunit 1
mm39_v1_chr11_-_106811507_106811599	0.883929	CUUUGGU	ENSMUST00000103067.10|Smurf2|ENSMUSG00000018363.17|SMAD specific E3 ubiquitin protein ligase 2
mm39_v1_chr7_-_25488060_25488135	0.88021	CUUUGGU	ENSMUST00000002677.11|Axl|ENSMUSG00000002602.17|AXL receptor tyrosine kinase	ENSMUST00000085948.11|Axl|ENSMUSG00000002602.17|AXL receptor tyrosine kinase
mm39_v1_chr7_+_122723365_122723446	0.879075	CUUUGGU	ENSMUST00000205514.2|Tnrc6a|ENSMUSG00000052707.9|trinucleotide repeat containing 6a	ENSMUST00000094053.7|Tnrc6a|ENSMUSG00000052707.9|trinucleotide repeat containing 6a
mm39_v1_chr18_+_32296126_32296249	0.878923	CUUUGGU	ENSMUST00000096575.5|Map3k2|ENSMUSG00000024383.10|mitogen-activated protein kinase kinase kinase 2
mm39_v1_chr2_-_84545504_84545562	0.875434	CUUUGGU	ENSMUST00000035840.6|Zdhhc5|ENSMUSG00000034075.11|zinc finger, DHHC domain containing 5
mm39_v1_chr5_-_73413888_73413979	0.869522	CUUUGGU	ENSMUST00000101127.12|Fryl|ENSMUSG00000070733.14|FRY like transcription coactivator
mm39_v1_chr13_-_49369454_49369538	0.869489	CUUUGGU	ENSMUST00000048946.7|Card19|ENSMUSG00000037960.12|caspase recruitment domain family, member 19
mm39_v1_chrX_+_72760183_72760224	0.864815	CUUUGGU	ENSMUST00000002084.14|Abcd1|ENSMUSG00000031378.15|ATP-binding cassette, sub-family D (ALD), member 1
mm39_v1_chr13_-_39144800_39144859	0.863473	CUUUGGU	ENSMUST00000225432.2|Slc35b3|ENSMUSG00000021432.16|solute carrier family 35, member B3	ENSMUST00000021870.12|Slc35b3|ENSMUSG00000021432.16|solute carrier family 35, member B3
mm39_v1_chr1_+_151631088_151631148	0.855785	CUUUGGU	ENSMUST00000188145.7|Edem3|ENSMUSG00000043019.13|ER degradation enhancer, mannosidase alpha-like 3	ENSMUST00000059498.12|Edem3|ENSMUSG00000043019.13|ER degradation enhancer, mannosidase alpha-like 3
mm39_v1_chr10_+_128641520_128641565	0.855578	CUUUGGU	ENSMUST00000219508.2|Dnajc14|ENSMUSG00000025354.6|DnaJ heat shock protein family (Hsp40) member C14	ENSMUST00000026410.2|Dnajc14|ENSMUSG00000025354.6|DnaJ heat shock protein family (Hsp40) member C14
mm39_v1_chr3_-_46402355_46402415	0.84332	CUUUGGU	ENSMUST00000195537.2|Pabpc4l|ENSMUSG00000090919.7|poly(A) binding protein, cytoplasmic 4-like	ENSMUST00000166505.7|Pabpc4l|ENSMUSG00000090919.7|poly(A) binding protein, cytoplasmic 4-like	ENSMUST00000195436.2|Pabpc4l|ENSMUSG00000090919.7|poly(A) binding protein, cytoplasmic 4-like
mm39_v1_chr16_+_49675969_49676120	0.842558	CUUUGGU	ENSMUST00000229101.2|Cd47|ENSMUSG00000055447.20|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	ENSMUST00000230836.2|Cd47|ENSMUSG00000055447.20|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	ENSMUST00000229206.2|Cd47|ENSMUSG00000055447.20|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	ENSMUST00000084838.14|Cd47|ENSMUSG00000055447.20|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	ENSMUST00000230281.2|Cd47|ENSMUSG00000055447.20|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
mm39_v1_chr11_-_97078698_97078752	0.840427	CUUUGGU	ENSMUST00000001479.5|Kpnb1|ENSMUSG00000001440.6|karyopherin (importin) beta 1
mm39_v1_chr9_+_15217548_15217625	0.839939	CUUUGGU	ENSMUST00000215124.2|Taf1d|ENSMUSG00000031939.17|TATA-box binding protein associated factor, RNA polymerase I, D	ENSMUST00000164079.9|Taf1d|ENSMUSG00000031939.17|TATA-box binding protein associated factor, RNA polymerase I, D	ENSMUST00000216109.2|Taf1d|ENSMUSG00000031939.17|TATA-box binding protein associated factor, RNA polymerase I, D
mm39_v1_chr3_+_31956814_31956852	0.838009	CUUUGGU	ENSMUST00000192429.6|Kcnmb2|ENSMUSG00000037610.16|potassium large conductance calcium-activated channel, subfamily M, beta member 2	ENSMUST00000191869.6|Kcnmb2|ENSMUSG00000037610.16|potassium large conductance calcium-activated channel, subfamily M, beta member 2	ENSMUST00000178668.2|Kcnmb2|ENSMUSG00000037610.16|potassium large conductance calcium-activated channel, subfamily M, beta member 2	ENSMUST00000119970.8|Kcnmb2|ENSMUSG00000037610.16|potassium large conductance calcium-activated channel, subfamily M, beta member 2
mm39_v1_chr4_+_116414855_116414932	0.837405	CUUUGGU	ENSMUST00000030460.15|Gpbp1l1|ENSMUSG00000034042.17|GC-rich promoter binding protein 1-like 1
mm39_v1_chr5_+_122422428_122422461	0.834988	CUUUGGU	ENSMUST00000053426.15|Pptc7|ENSMUSG00000038582.16|PTC7 protein phosphatase homolog
mm39_v1_chr2_+_127967951_127967976	0.832513	CUUUGGU	ENSMUST00000089634.12|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)	ENSMUST00000019281.14|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)	ENSMUST00000110341.9|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)	ENSMUST00000103211.8|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)	ENSMUST00000103210.2|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)
mm39_v1_chr7_-_66339319_66339351	0.826191	CUUUGGU	ENSMUST00000124899.8|Asb7|ENSMUSG00000030509.18|ankyrin repeat and SOCS box-containing 7
mm39_v1_chr4_+_19280850_19280908	0.820142	CUUUGGU	ENSMUST00000102999.2|Cngb3|ENSMUSG00000056494.8|cyclic nucleotide gated channel beta 3
mm39_v1_chr12_-_73160181_73160230	0.816229	CUUUGGU	ENSMUST00000043208.8|Six4|ENSMUSG00000034460.10|sine oculis-related homeobox 4	ENSMUST00000175693.3|Six4|ENSMUSG00000034460.10|sine oculis-related homeobox 4
mm39_v1_chr3_-_115800989_115801060	0.81292	CUUUGGU	ENSMUST00000067485.4|Slc30a7|ENSMUSG00000054414.5|solute carrier family 30 (zinc transporter), member 7
mm39_v1_chr11_+_69737437_69737476	0.80846	CUUUGGU	ENSMUST00000152566.8|Plscr3|ENSMUSG00000019461.13|phospholipid scramblase 3	ENSMUST00000108633.9|Plscr3|ENSMUSG00000019461.13|phospholipid scramblase 3
mm39_v1_chr14_+_30201569_30201642	0.804272	CUUUGGU	ENSMUST00000022535.9|Dcp1a|ENSMUSG00000021962.10|decapping mRNA 1A	ENSMUST00000223658.2|Dcp1a|ENSMUSG00000021962.10|decapping mRNA 1A
mm39_v1_chr15_-_75941530_75941633	0.787376	CUUUGGU	ENSMUST00000002603.12|Scrib|ENSMUSG00000022568.18|scribbled planar cell polarity	ENSMUST00000063747.12|Scrib|ENSMUSG00000022568.18|scribbled planar cell polarity	ENSMUST00000109946.9|Scrib|ENSMUSG00000022568.18|scribbled planar cell polarity
mm39_v1_chr2_+_4405769_4405786	0.784459	CUUUGGU	ENSMUST00000075767.14|Frmd4a|ENSMUSG00000026657.18|FERM domain containing 4A
mm39_v1_chr5_+_36050663_36050817	0.78028	CUUUGGU	ENSMUST00000064571.11|Afap1|ENSMUSG00000029094.13|actin filament associated protein 1
mm39_v1_chr16_-_97723753_97723833	0.773656	CUUUGGU	ENSMUST00000170757.3|C2cd2|ENSMUSG00000045975.9|C2 calcium-dependent domain containing 2
mm39_v1_chr3_+_52948938_52949004	0.76202	CUUUGGU	ENSMUST00000059562.14|Lhfp|ENSMUSG00000048332.14|lipoma HMGIC fusion partner	ENSMUST00000147139.2|Lhfp|ENSMUSG00000048332.14|lipoma HMGIC fusion partner
mm39_v1_chr4_-_128699838_128699966	0.759873	CUUUGGU	ENSMUST00000106072.9|Zfp362|ENSMUSG00000028799.16|zinc finger protein 362	ENSMUST00000170934.3|Zfp362|ENSMUSG00000028799.16|zinc finger protein 362
mm39_v1_chr1_-_163141230_163141246	0.747203	CUUUGGU	ENSMUST00000174397.3|Prrx1|ENSMUSG00000026586.17|paired related homeobox 1	ENSMUST00000075805.13|Prrx1|ENSMUSG00000026586.17|paired related homeobox 1
mm39_v1_chr18_-_38068456_38068529	0.746295	CUUUGGU	ENSMUST00000080033.7|Diaph1|ENSMUSG00000024456.17|diaphanous related formin 1	ENSMUST00000115631.8|Diaph1|ENSMUSG00000024456.17|diaphanous related formin 1	ENSMUST00000115634.8|Diaph1|ENSMUSG00000024456.17|diaphanous related formin 1
mm39_v1_chr2_+_119727689_119727786	0.745621	CUUUGGU	ENSMUST00000046717.13|Mga|ENSMUSG00000033943.16|MAX gene associated	ENSMUST00000079934.12|Mga|ENSMUSG00000033943.16|MAX gene associated	ENSMUST00000110774.8|Mga|ENSMUSG00000033943.16|MAX gene associated	ENSMUST00000110773.9|Mga|ENSMUSG00000033943.16|MAX gene associated	ENSMUST00000156510.2|Mga|ENSMUSG00000033943.16|MAX gene associated
mm39_v1_chr8_+_41692755_41692815	0.729581	CUUUGGU	ENSMUST00000210862.2|Pcm1|ENSMUSG00000031592.11|pericentriolar material 1	ENSMUST00000045218.9|Pcm1|ENSMUSG00000031592.11|pericentriolar material 1	ENSMUST00000211247.2|Pcm1|ENSMUSG00000031592.11|pericentriolar material 1
mm39_v1_chr7_+_65511777_65511888	0.725933	CUUUGGU	ENSMUST00000055576.12|Pcsk6|ENSMUSG00000030513.15|proprotein convertase subtilisin/kexin type 6	ENSMUST00000098391.11|Pcsk6|ENSMUSG00000030513.15|proprotein convertase subtilisin/kexin type 6
mm39_v1_chrX_+_159551009_159551114	0.722939	CUUUGGU	ENSMUST00000033650.14|Rs1|ENSMUSG00000031293.14|retinoschisis (X-linked, juvenile) 1 (human)
mm39_v1_chr2_-_181101158_181101232	0.721251	CUUUGGU	ENSMUST00000155535.2|Zbtb46|ENSMUSG00000027583.14|zinc finger and BTB domain containing 46	ENSMUST00000029106.13|Zbtb46|ENSMUSG00000027583.14|zinc finger and BTB domain containing 46	ENSMUST00000087409.10|Zbtb46|ENSMUSG00000027583.14|zinc finger and BTB domain containing 46
mm39_v1_chr12_-_101049884_101049977	0.720454	CUUUGGU	ENSMUST00000048305.10|Ppp4r3a|ENSMUSG00000041846.16|protein phosphatase 4 regulatory subunit 3A	ENSMUST00000163095.9|Ppp4r3a|ENSMUSG00000041846.16|protein phosphatase 4 regulatory subunit 3A
mm39_v1_chr6_+_87019819_87019900	0.718668	CUUUGGU	ENSMUST00000113657.8|Gfpt1|ENSMUSG00000029992.15|glutamine fructose-6-phosphate transaminase 1	ENSMUST00000113658.8|Gfpt1|ENSMUSG00000029992.15|glutamine fructose-6-phosphate transaminase 1	ENSMUST00000113655.8|Gfpt1|ENSMUSG00000029992.15|glutamine fructose-6-phosphate transaminase 1	ENSMUST00000032057.8|Gfpt1|ENSMUSG00000029992.15|glutamine fructose-6-phosphate transaminase 1
mm39_v1_chr7_+_127084283_127084393	0.692334	CUUUGGU	ENSMUST00000048896.8|Fbrs|ENSMUSG00000042423.10|fibrosin
mm39_v1_chr1_-_64160557_64160650	0.688773	CUUUGGU	ENSMUST00000055001.10|Klf7|ENSMUSG00000025959.14|Kruppel-like factor 7 (ubiquitous)	ENSMUST00000114086.8|Klf7|ENSMUSG00000025959.14|Kruppel-like factor 7 (ubiquitous)
mm39_v1_chr2_+_118731860_118731969	0.68821	CUUUGGU	ENSMUST00000036578.7|Bahd1|ENSMUSG00000040007.9|bromo adjacent homology domain containing 1
mm39_v1_chr9_-_44679136_44679147	0.683386	CUUUGGU	ENSMUST00000034607.10|Arcn1|ENSMUSG00000032096.17|archain 1
mm39_v1_chr10_-_37014859_37014933	0.680351	CUUUGGU	ENSMUST00000092584.6|Marcks|ENSMUSG00000069662.6|myristoylated alanine rich protein kinase C substrate
mm39_v1_chr16_-_65359566_65359655	0.661983	CUUUGGU	ENSMUST00000004965.8|Chmp2b|ENSMUSG00000004843.8|charged multivesicular body protein 2B
mm39_v1_chr1_+_180978491_180978549	0.660397	CUUUGGU	ENSMUST00000134115.8|Cnih4|ENSMUSG00000062169.14|cornichon family AMPA receptor auxiliary protein 4	ENSMUST00000111059.2|Cnih4|ENSMUSG00000062169.14|cornichon family AMPA receptor auxiliary protein 4
mm39_v1_chr2_-_102016717_102016735	0.659886	CUUUGGU	ENSMUST00000058790.12|Ldlrad3|ENSMUSG00000048058.18|low density lipoprotein receptor class A domain containing 3
mm39_v1_chr1_-_135241429_135241516	0.658796	CUUUGGU	ENSMUST00000134088.3|Timm17a|ENSMUSG00000062580.10|translocase of inner mitochondrial membrane 17a	ENSMUST00000081104.10|Timm17a|ENSMUSG00000062580.10|translocase of inner mitochondrial membrane 17a
mm39_v1_chr8_-_85414528_85414539	0.65221	CUUUGGU	ENSMUST00000001975.6|Nacc1|ENSMUSG00000001910.6|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
mm39_v1_chr5_+_137627376_137627383	0.649244	CUUUGGU	ENSMUST00000031734.16|Lrch4|ENSMUSG00000093445.8|leucine-rich repeats and calponin homology (CH) domain containing 4
mm39_v1_chr4_-_133746138_133746152	0.640329	CUUUGGU	ENSMUST00000051674.3|Lin28a|ENSMUSG00000050966.10|lin-28 homolog A (C. elegans)
mm39_v1_chr12_+_29988035_29988058	0.639325	CUUUGGU	ENSMUST00000122328.8|Pxdn|ENSMUSG00000020674.18|peroxidasin	ENSMUST00000118321.3|Pxdn|ENSMUSG00000020674.18|peroxidasin
mm39_v1_chr2_+_153187729_153187809	0.636983	CUUUGGU	ENSMUST00000227428.2|Asxl1|ENSMUSG00000042548.15|ASXL transcriptional regulator 1	ENSMUST00000109790.2|Asxl1|ENSMUSG00000042548.15|ASXL transcriptional regulator 1
mm39_v1_chrX_-_110372733_110372745	0.627676	CUUUGGU	ENSMUST00000065976.12|Rps6ka6|ENSMUSG00000025665.17|ribosomal protein S6 kinase polypeptide 6
mm39_v1_chr5_+_108416763_108416790	0.624762	CUUUGGU	ENSMUST00000031190.5|Dr1|ENSMUSG00000029265.5|down-regulator of transcription 1
mm39_v1_chr11_-_95956176_95956214	0.621572	CUUUGGU	ENSMUST00000100528.5|Ube2z|ENSMUSG00000014349.8|ubiquitin-conjugating enzyme E2Z
mm39_v1_chr4_+_150366028_150366103	0.620396	CUUUGGU	ENSMUST00000105682.9|Rere|ENSMUSG00000039852.18|arginine glutamic acid dipeptide (RE) repeats
mm39_v1_chr10_-_107330580_107330603	0.61789	CUUUGGU	ENSMUST00000044210.5|Myf6|ENSMUSG00000035923.5|myogenic factor 6
mm39_v1_chr2_-_33321306_33321359	0.608998	CUUUGGU	ENSMUST00000113158.8|Zbtb34|ENSMUSG00000068966.11|zinc finger and BTB domain containing 34
mm39_v1_chr18_-_58343423_58343559	0.607534	CUUUGGU	ENSMUST00000025497.8|Fbn2|ENSMUSG00000024598.10|fibrillin 2
mm39_v1_chr14_-_67309866_67309925	0.607218	CUUUGGU	ENSMUST00000225380.2|Ppp2r2a|ENSMUSG00000022052.10|protein phosphatase 2, regulatory subunit B, alpha	ENSMUST00000089230.7|Ppp2r2a|ENSMUSG00000022052.10|protein phosphatase 2, regulatory subunit B, alpha
mm39_v1_chr6_-_72212547_72212569	0.605221	CUUUGGU	ENSMUST00000042646.8|Atoh8|ENSMUSG00000037621.9|atonal bHLH transcription factor 8
mm39_v1_chr18_-_80512850_80512934	0.59937	CUUUGGU	ENSMUST00000036229.13|Ctdp1|ENSMUSG00000033323.15|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
mm39_v1_chr1_-_84818223_84818261	0.585223	CUUUGGU	ENSMUST00000186465.7|Trip12|ENSMUSG00000026219.15|thyroid hormone receptor interactor 12
mm39_v1_chr4_+_80828883_80828922	0.584694	CUUUGGU	ENSMUST00000055922.4|Lurap1l|ENSMUSG00000048706.4|leucine rich adaptor protein 1-like
mm39_v1_chr4_+_108477117_108477195	0.580588	CUUUGGU	ENSMUST00000030320.13|Cc2d1b|ENSMUSG00000028582.15|coiled-coil and C2 domain containing 1B
mm39_v1_chr14_-_70391260_70391296	0.577205	CUUUGGU	ENSMUST00000035612.7|Ccar2|ENSMUSG00000033712.7|cell cycle activator and apoptosis regulator 2
mm39_v1_chr16_-_78373510_78373535	0.574544	CUUUGGU	ENSMUST00000231973.2|D16Ertd472e|ENSMUSG00000022864.15|DNA segment, Chr 16, ERATO Doi 472, expressed	ENSMUST00000232528.2|D16Ertd472e|ENSMUSG00000022864.15|DNA segment, Chr 16, ERATO Doi 472, expressed	ENSMUST00000114220.9|D16Ertd472e|ENSMUSG00000022864.15|DNA segment, Chr 16, ERATO Doi 472, expressed
mm39_v1_chr9_-_77452152_77452196	0.574269	CUUUGGU	ENSMUST00000183873.8|Lrrc1|ENSMUSG00000032352.17|leucine rich repeat containing 1
mm39_v1_chr8_+_4288733_4288768	0.574081	CUUUGGU	ENSMUST00000110998.9|Map2k7|ENSMUSG00000002948.20|mitogen-activated protein kinase kinase 7	ENSMUST00000062686.11|Map2k7|ENSMUSG00000002948.20|mitogen-activated protein kinase kinase 7
mm39_v1_chr11_+_97576619_97576673	0.569383	CUUUGGU	ENSMUST00000107584.8|Cisd3|ENSMUSG00000078695.9|CDGSH iron sulfur domain 3	ENSMUST00000107585.9|Cisd3|ENSMUSG00000078695.9|CDGSH iron sulfur domain 3
mm39_v1_chr13_-_46118433_46118477	0.564242	CUUUGGU	ENSMUST00000167708.4|Atxn1|ENSMUSG00000046876.17|ataxin 1	ENSMUST00000091628.11|Atxn1|ENSMUSG00000046876.17|ataxin 1	ENSMUST00000180110.9|Atxn1|ENSMUSG00000046876.17|ataxin 1
mm39_v1_chr13_-_81859056_81859132	0.561833	CUUUGGU	ENSMUST00000161920.2|Polr3g|ENSMUSG00000035834.12|polymerase (RNA) III (DNA directed) polypeptide G	ENSMUST00000048993.12|Polr3g|ENSMUSG00000035834.12|polymerase (RNA) III (DNA directed) polypeptide G
mm39_v1_chr14_-_69522431_69522561	0.561527	CUUUGGU	ENSMUST00000183882.2|Slc25a37|ENSMUSG00000034248.8|solute carrier family 25, member 37	ENSMUST00000037064.5|Slc25a37|ENSMUSG00000034248.8|solute carrier family 25, member 37
mm39_v1_chr4_+_119090093_119090153	0.554234	CUUUGGU	ENSMUST00000121111.9|P3h1|ENSMUSG00000028641.17|prolyl 3-hydroxylase 1	ENSMUST00000030393.13|P3h1|ENSMUSG00000028641.17|prolyl 3-hydroxylase 1	ENSMUST00000102662.11|P3h1|ENSMUSG00000028641.17|prolyl 3-hydroxylase 1
mm39_v1_chr3_+_96508400_96508465	0.546274	CUUUGGU	ENSMUST00000062058.5|Lix1l|ENSMUSG00000049288.5|Lix1-like
mm39_v1_chr9_+_45924105_45924119	0.544747	CUUUGGU	ENSMUST00000126865.8|Sik3|ENSMUSG00000034135.16|SIK family kinase 3
mm39_v1_chr16_-_22084700_22084755	0.540577	CUUUGGU	ENSMUST00000161286.8|Tra2b|ENSMUSG00000022858.17|transformer 2 beta
mm39_v1_chr19_+_46561801_46561860	0.535915	CUUUGGU	ENSMUST00000026011.8|Sfxn2|ENSMUSG00000025036.8|sideroflexin 2
mm39_v1_chr14_-_63746541_63746541	0.535564	CUUUGGU	ENSMUST00000022522.15|Tdh|ENSMUSG00000021953.15|L-threonine dehydrogenase
mm39_v1_chr10_-_123032821_123032868	0.535423	CUUUGGU	ENSMUST00000219619.2|Usp15|ENSMUSG00000020124.11|ubiquitin specific peptidase 15	ENSMUST00000020334.9|Usp15|ENSMUSG00000020124.11|ubiquitin specific peptidase 15
mm39_v1_chr3_-_79474989_79475000	0.535235	CUUUGGU	ENSMUST00000076136.7|Fnip2|ENSMUSG00000061175.13|folliculin interacting protein 2
mm39_v1_chr15_-_38079089_38079100	0.534888	CUUUGGU	ENSMUST00000110336.4|Ubr5|ENSMUSG00000037487.8|ubiquitin protein ligase E3 component n-recognin 5
mm39_v1_chr12_+_3476857_3476925	0.532549	CUUUGGU	ENSMUST00000111215.10|Asxl2|ENSMUSG00000037486.19|ASXL transcriptional regulator 2	ENSMUST00000092003.12|Asxl2|ENSMUSG00000037486.19|ASXL transcriptional regulator 2	ENSMUST00000144247.9|Asxl2|ENSMUSG00000037486.19|ASXL transcriptional regulator 2	ENSMUST00000153102.9|Asxl2|ENSMUSG00000037486.19|ASXL transcriptional regulator 2
mm39_v1_chr8_-_117459730_117459824	0.531902	CUUUGGU	ENSMUST00000109102.4|Cdyl2|ENSMUSG00000031758.11|chromodomain protein, Y chromosome-like 2
mm39_v1_chr12_+_75355082_75355096	0.531858	CUUUGGU	ENSMUST00000118602.8|Rhoj|ENSMUSG00000046768.14|ras homolog family member J	ENSMUST00000118966.8|Rhoj|ENSMUSG00000046768.14|ras homolog family member J	ENSMUST00000055390.6|Rhoj|ENSMUSG00000046768.14|ras homolog family member J
mm39_v1_chr1_-_10302895_10302895	0.531271	CUUUGGU	ENSMUST00000088615.11|Arfgef1|ENSMUSG00000067851.12|ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)	ENSMUST00000131556.2|Arfgef1|ENSMUSG00000067851.12|ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)
mm39_v1_chr19_-_55087849_55087925	0.529594	CUUUGGU	ENSMUST00000061856.6|Gpam|ENSMUSG00000024978.12|glycerol-3-phosphate acyltransferase, mitochondrial
mm39_v1_chr2_+_28403255_28403338	0.518833	CUUUGGU	ENSMUST00000028170.15|Ralgds|ENSMUSG00000026821.17|ral guanine nucleotide dissociation stimulator
mm39_v1_chr15_+_80595486_80595541	0.51386	CUUUGGU	ENSMUST00000067689.9|Tnrc6b|ENSMUSG00000047888.11|trinucleotide repeat containing 6b
mm39_v1_chr2_-_70655997_70656163	0.513751	CUUUGGU	ENSMUST00000038584.9|Tlk1|ENSMUSG00000041997.17|tousled-like kinase 1
mm39_v1_chr13_-_34529157_34529257	0.509471	CUUUGGU	ENSMUST00000040336.12|Slc22a23|ENSMUSG00000038267.16|solute carrier family 22, member 23
mm39_v1_chr17_+_28361115_28361167	0.509158	CUUUGGU	ENSMUST00000043503.11|Scube3|ENSMUSG00000038677.15|signal peptide, CUB domain, EGF-like 3
mm39_v1_chr16_+_4867876_4867992	0.507887	CUUUGGU	ENSMUST00000230703.2|Ubn1|ENSMUSG00000039473.9|ubinuclein 1	ENSMUST00000052449.6|Ubn1|ENSMUSG00000039473.9|ubinuclein 1
mm39_v1_chr14_+_30741082_30741114	0.506649	CUUUGGU	ENSMUST00000112098.11|Pbrm1|ENSMUSG00000042323.18|polybromo 1	ENSMUST00000112095.8|Pbrm1|ENSMUSG00000042323.18|polybromo 1	ENSMUST00000112106.8|Pbrm1|ENSMUSG00000042323.18|polybromo 1	ENSMUST00000146325.8|Pbrm1|ENSMUSG00000042323.18|polybromo 1
mm39_v1_chrX_+_97192356_97192388	0.501343	CUUUGGU	ENSMUST00000052837.9|Ar|ENSMUSG00000046532.9|androgen receptor
mm39_v1_chr6_-_148345834_148345887	0.498138	CUUUGGU	ENSMUST00000060095.15|Tmtc1|ENSMUSG00000030306.15|transmembrane and tetratricopeptide repeat containing 1	ENSMUST00000100772.10|Tmtc1|ENSMUSG00000030306.15|transmembrane and tetratricopeptide repeat containing 1
mm39_v1_chr11_+_96256565_96256578	0.497289	CUUUGGU	ENSMUST00000019117.3|Hoxb1|ENSMUSG00000018973.3|homeobox B1
mm39_v1_chr17_+_35235552_35235614	0.494288	CUUUGGU	ENSMUST00000007245.8|Vwa7|ENSMUSG00000007030.9|von Willebrand factor A domain containing 7	ENSMUST00000172499.2|Vwa7|ENSMUSG00000007030.9|von Willebrand factor A domain containing 7
mm39_v1_chr3_-_88410495_88410663	0.487399	CUUUGGU	ENSMUST00000120377.8|Lmna|ENSMUSG00000028063.16|lamin A	ENSMUST00000029699.13|Lmna|ENSMUSG00000028063.16|lamin A
mm39_v1_chr4_+_47353217_47353226	0.486111	CUUUGGU	ENSMUST00000007757.15|Tgfbr1|ENSMUSG00000007613.16|transforming growth factor, beta receptor I
mm39_v1_chr15_+_58287305_58287361	0.485481	CUUUGGU	ENSMUST00000037270.5|Fam91a1|ENSMUSG00000037119.5|family with sequence similarity 91, member A1
mm39_v1_chr7_+_130467486_130467542	0.483709	CUUUGGU	ENSMUST00000120441.8|Plekha1|ENSMUSG00000040268.18|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
mm39_v1_chr17_+_6157154_6157182	0.473339	CUUUGGU	ENSMUST00000149756.8|Tulp4|ENSMUSG00000034377.11|tubby like protein 4
mm39_v1_chr5_-_76452365_76452398	0.471845	CUUUGGU	ENSMUST00000075159.5|Clock|ENSMUSG00000029238.12|circadian locomotor output cycles kaput
mm39_v1_chr6_+_47854138_47854138	0.46985	CUUUGGU	ENSMUST00000061890.8|Zfp282|ENSMUSG00000025821.10|zinc finger protein 282
mm39_v1_chr9_+_83430363_83430393	0.462479	CUUUGGU	ENSMUST00000188241.7|Sh3bgrl2|ENSMUSG00000032261.17|SH3 domain binding glutamic acid-rich protein like 2	ENSMUST00000113215.10|Sh3bgrl2|ENSMUSG00000032261.17|SH3 domain binding glutamic acid-rich protein like 2
mm39_v1_chr2_-_90900628_90900762	0.462349	CUUUGGU	ENSMUST00000111436.3|Slc39a13|ENSMUSG00000002105.16|solute carrier family 39 (metal ion transporter), member 13	ENSMUST00000073575.12|Slc39a13|ENSMUSG00000002105.16|solute carrier family 39 (metal ion transporter), member 13
mm39_v1_chr16_+_32698149_32698230	0.46167	CUUUGGU	ENSMUST00000023489.11|Fyttd1|ENSMUSG00000022800.15|forty-two-three domain containing 1	ENSMUST00000171325.9|Fyttd1|ENSMUSG00000022800.15|forty-two-three domain containing 1
mm39_v1_chr16_-_94114415_94114445	0.45517	CUUUGGU	ENSMUST00000163193.9|Hlcs|ENSMUSG00000040820.17|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)
mm39_v1_chr11_-_103303480_103303537	0.454327	CUUUGGU	ENSMUST00000041272.10|Plekhm1|ENSMUSG00000034247.10|pleckstrin homology domain containing, family M (with RUN domain) member 1
mm39_v1_chr17_-_66384017_66384086	0.449206	CUUUGGU	ENSMUST00000150766.2|Ankrd12|ENSMUSG00000034647.16|ankyrin repeat domain 12	ENSMUST00000038116.13|Ankrd12|ENSMUSG00000034647.16|ankyrin repeat domain 12
mm39_v1_chr13_-_21937997_21938040	0.448695	CUUUGGU	ENSMUST00000074752.4|H2ac15|ENSMUSG00000063021.4|H2A clustered histone 15
mm39_v1_chr7_+_58878490_58878518	0.446234	CUUUGGU	ENSMUST00000202945.4|Ube3a|ENSMUSG00000025326.13|ubiquitin protein ligase E3A	ENSMUST00000107537.5|Ube3a|ENSMUSG00000025326.13|ubiquitin protein ligase E3A
mm39_v1_chr6_+_146626455_146626502	0.435829	CUUUGGU	ENSMUST00000001675.14|Stk38l|ENSMUSG00000001630.14|serine/threonine kinase 38 like
mm39_v1_chr3_+_101917455_101917487	0.422141	CUUUGGU	ENSMUST00000066187.6|Nhlh2|ENSMUSG00000048540.9|nescient helix loop helix 2	ENSMUST00000198675.2|Nhlh2|ENSMUSG00000048540.9|nescient helix loop helix 2
mm39_v1_chr16_+_32151056_32151086	0.414627	CUUUGGU	ENSMUST00000115151.5|Ubxn7|ENSMUSG00000053774.10|UBX domain protein 7	ENSMUST00000232137.2|Ubxn7|ENSMUSG00000053774.10|UBX domain protein 7
mm39_v1_chr16_-_5021843_5021881	0.407616	CUUUGGU	ENSMUST00000147567.2|Nagpa|ENSMUSG00000023143.11|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase	ENSMUST00000023911.11|Nagpa|ENSMUSG00000023143.11|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
mm39_v1_chr3_-_95189387_95189387	0.405805	CUUUGGU	ENSMUST00000015855.8|Prune1|ENSMUSG00000015711.9|prune exopolyphosphatase
mm39_v1_chr5_+_28370687_28370720	0.405743	CUUUGGU	ENSMUST00000036177.9|En2|ENSMUSG00000039095.9|engrailed 2
mm39_v1_chr4_+_117109204_117109254	0.404469	CUUUGGU	ENSMUST00000125943.8|Tmem53|ENSMUSG00000048772.16|transmembrane protein 53	ENSMUST00000106434.8|Tmem53|ENSMUSG00000048772.16|transmembrane protein 53
mm39_v1_chr4_-_56865134_56865208	0.395296	CUUUGGU	ENSMUST00000107612.3|Ctnnal1|ENSMUSG00000038816.15|catenin (cadherin associated protein), alpha-like 1	ENSMUST00000045142.15|Ctnnal1|ENSMUSG00000038816.15|catenin (cadherin associated protein), alpha-like 1
mm39_v1_chr2_+_165834546_165834563	0.385038	CUUUGGU	ENSMUST00000109252.8|Ncoa3|ENSMUSG00000027678.18|nuclear receptor coactivator 3	ENSMUST00000088095.6|Ncoa3|ENSMUSG00000027678.18|nuclear receptor coactivator 3
mm39_v1_chr11_-_95896721_95896778	0.382968	CUUUGGU	ENSMUST00000013559.3|Igf2bp1|ENSMUSG00000013415.10|insulin-like growth factor 2 mRNA binding protein 1
mm39_v1_chr15_-_66841465_66841496	0.372523	CUUUGGU	ENSMUST00000170903.8|Ndrg1|ENSMUSG00000005125.14|N-myc downstream regulated gene 1	ENSMUST00000166420.8|Ndrg1|ENSMUSG00000005125.14|N-myc downstream regulated gene 1	ENSMUST00000005256.14|Ndrg1|ENSMUSG00000005125.14|N-myc downstream regulated gene 1	ENSMUST00000164070.2|Ndrg1|ENSMUSG00000005125.14|N-myc downstream regulated gene 1
mm39_v1_chr11_+_70591299_70591476	0.370918	CUUUGGU	ENSMUST00000152618.9|Kif1c|ENSMUSG00000020821.18|kinesin family member 1C	ENSMUST00000102554.8|Kif1c|ENSMUSG00000020821.18|kinesin family member 1C	ENSMUST00000094499.11|Kif1c|ENSMUSG00000020821.18|kinesin family member 1C	ENSMUST00000072187.12|Kif1c|ENSMUSG00000020821.18|kinesin family member 1C	ENSMUST00000137119.3|Kif1c|ENSMUSG00000020821.18|kinesin family member 1C
mm39_v1_chrX_+_6489313_6489349	0.368244	CUUUGGU	ENSMUST00000089520.3|Shroom4|ENSMUSG00000068270.16|shroom family member 4
mm39_v1_chr12_+_80690985_80691023	0.367847	CUUUGGU	ENSMUST00000219405.2|Slc39a9|ENSMUSG00000048833.10|solute carrier family 39 (zinc transporter), member 9	ENSMUST00000085245.7|Slc39a9|ENSMUSG00000048833.10|solute carrier family 39 (zinc transporter), member 9
mm39_v1_chr12_-_118265103_118265162	0.36394	CUUUGGU	ENSMUST00000222314.2|Sp4|ENSMUSG00000025323.11|trans-acting transcription factor 4	ENSMUST00000026367.11|Sp4|ENSMUSG00000025323.11|trans-acting transcription factor 4
mm39_v1_chr6_+_120643323_120643386	0.362528	CUUUGGU	ENSMUST00000112686.8|Cecr2|ENSMUSG00000071226.12|CECR2, histone acetyl-lysine reader
mm39_v1_chr6_+_61157279_61157361	0.358766	CUUUGGU	ENSMUST00000126214.8|Ccser1|ENSMUSG00000039578.18|coiled-coil serine rich 1
mm39_v1_chr10_+_20188207_20188238	0.354551	CUUUGGU	ENSMUST00000092678.10|Bclaf1|ENSMUSG00000037608.17|BCL2-associated transcription factor 1	ENSMUST00000043881.12|Bclaf1|ENSMUSG00000037608.17|BCL2-associated transcription factor 1
mm39_v1_chr9_+_13573756_13573899	0.34181	CUUUGGU	ENSMUST00000177755.3|Maml2|ENSMUSG00000031925.18|mastermind like transcriptional coactivator 2
mm39_v1_chr14_-_21764638_21764652	0.335853	CUUUGGU	ENSMUST00000073870.7|Dupd1|ENSMUSG00000063821.7|dual specificity phosphatase and pro isomerase domain containing 1
mm39_v1_chr14_-_75991903_75992003	0.33469	CUUUGGU	ENSMUST00000049168.9|Cog3|ENSMUSG00000034893.10|component of oligomeric golgi complex 3
mm39_v1_chr16_-_23807602_23807602	0.330155	CUUUGGU	ENSMUST00000023151.6|Bcl6|ENSMUSG00000022508.6|B cell leukemia/lymphoma 6
mm39_v1_chr12_-_104718159_104718211	0.329792	CUUUGGU	ENSMUST00000041987.7|Dicer1|ENSMUSG00000041415.11|dicer 1, ribonuclease type III
mm39_v1_chr1_+_160733942_160734030	0.329116	CUUUGGU	ENSMUST00000161609.8|Rc3h1|ENSMUSG00000040423.12|RING CCCH (C3H) domains 1
mm39_v1_chr6_+_49296208_49296308	0.328795	CUUUGGU	ENSMUST00000055559.8|Ccdc126|ENSMUSG00000050786.9|coiled-coil domain containing 126	ENSMUST00000114491.2|Ccdc126|ENSMUSG00000050786.9|coiled-coil domain containing 126
mm39_v1_chr9_-_94420128_94420142	0.323299	CUUUGGU	ENSMUST00000113028.2|Dipk2a|ENSMUSG00000045414.8|divergent protein kinase domain 2A
mm39_v1_chr14_+_48683797_48683886	0.315306	CUUUGGU	ENSMUST00000111735.10|Tmem260|ENSMUSG00000036339.19|transmembrane protein 260
mm39_v1_chr15_+_79575046_79575109	0.314032	CUUUGGU	ENSMUST00000046463.10|Gtpbp1|ENSMUSG00000042535.10|GTP binding protein 1
mm39_v1_chr9_+_56982622_56982727	0.312875	CUUUGGU	ENSMUST00000167715.8|Sin3a|ENSMUSG00000042557.15|transcriptional regulator, SIN3A (yeast)
mm39_v1_chr11_+_87938519_87938554	0.31091	CUUUGGU	ENSMUST00000079866.11|Srsf1|ENSMUSG00000018379.18|serine and arginine-rich splicing factor 1
mm39_v1_chr19_+_9979033_9979067	0.309408	CUUUGGU	ENSMUST00000121418.8|Rab3il1|ENSMUSG00000024663.21|RAB3A interacting protein (rabin3)-like 1
mm39_v1_chr2_-_38177359_38177406	0.308661	CUUUGGU	ENSMUST00000102787.10|Dennd1a|ENSMUSG00000035392.18|DENN/MADD domain containing 1A
mm39_v1_chr1_+_82817170_82817239	0.303617	CUUUGGU	ENSMUST00000189220.7|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1	ENSMUST00000113444.8|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1
mm39_v1_chr4_+_74160705_74160734	0.302062	CUUUGGU	ENSMUST00000077851.10|Kdm4c|ENSMUSG00000028397.14|lysine (K)-specific demethylase 4C
mm39_v1_chr9_+_70586232_70586292	0.300993	CUUUGGU	ENSMUST00000067880.13|Adam10|ENSMUSG00000054693.15|a disintegrin and metallopeptidase domain 10
mm39_v1_chr13_-_120252337_120252425	0.292134	CUUUGGU	ENSMUST00000177916.8|Zfp131|ENSMUSG00000094870.9|zinc finger protein 131	ENSMUST00000178271.3|Zfp131|ENSMUSG00000094870.9|zinc finger protein 131	ENSMUST00000223722.2|Zfp131|ENSMUSG00000094870.9|zinc finger protein 131
mm39_v1_chr8_-_120285457_120285506	0.292013	CUUUGGU	ENSMUST00000098362.11|Mbtps1|ENSMUSG00000031835.17|membrane-bound transcription factor peptidase, site 1	ENSMUST00000081381.6|Mbtps1|ENSMUSG00000031835.17|membrane-bound transcription factor peptidase, site 1
mm39_v1_chr3_+_96604390_96604406	0.289526	CUUUGGU	ENSMUST00000162778.3|Pias3|ENSMUSG00000028101.19|protein inhibitor of activated STAT 3	ENSMUST00000064900.16|Pias3|ENSMUSG00000028101.19|protein inhibitor of activated STAT 3
mm39_v1_chr7_+_27878894_27878960	0.289387	CUUUGGU	ENSMUST00000085901.13|Dyrk1b|ENSMUSG00000002409.19|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	ENSMUST00000172761.8|Dyrk1b|ENSMUSG00000002409.19|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm39_v1_chr8_-_4375320_4375413	0.287915	CUUUGGU	ENSMUST00000098950.6|Elavl1|ENSMUSG00000040028.11|ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)
mm39_v1_chr10_-_63039709_63039735	0.287423	CUUUGGU	ENSMUST00000095580.3|Mypn|ENSMUSG00000020067.9|myopalladin
mm39_v1_chr12_+_81906738_81906814	0.283717	CUUUGGU	ENSMUST00000221721.2|Pcnx|ENSMUSG00000021140.10|pecanex homolog	ENSMUST00000021567.6|Pcnx|ENSMUSG00000021140.10|pecanex homolog
mm39_v1_chr3_+_116306719_116306793	0.277172	CUUUGGU	ENSMUST00000000349.11|Dbt|ENSMUSG00000000340.11|dihydrolipoamide branched chain transacylase E2	ENSMUST00000197201.5|Dbt|ENSMUSG00000000340.11|dihydrolipoamide branched chain transacylase E2
mm39_v1_chr12_-_59266511_59266563	0.271585	CUUUGGU	ENSMUST00000043204.8|Fbxo33|ENSMUSG00000035329.8|F-box protein 33
mm39_v1_chr8_-_96534085_96534099	0.271469	CUUUGGU	ENSMUST00000098473.11|Cnot1|ENSMUSG00000036550.17|CCR4-NOT transcription complex, subunit 1	ENSMUST00000211887.2|Cnot1|ENSMUSG00000036550.17|CCR4-NOT transcription complex, subunit 1
mm39_v1_chr8_-_103512274_103512408	0.268666	CUUUGGU	ENSMUST00000075190.5|Cdh11|ENSMUSG00000031673.7|cadherin 11
mm39_v1_chr4_-_109333866_109333924	0.266239	CUUUGGU	ENSMUST00000030284.10|Rnf11|ENSMUSG00000028557.11|ring finger protein 11
mm39_v1_chr19_+_23665071_23665108	0.265505	CUUUGGU	ENSMUST00000099560.5|Ptar1|ENSMUSG00000074925.5|protein prenyltransferase alpha subunit repeat containing 1
mm39_v1_chr13_+_94495457_94495561	0.25519	CUUUGGU	ENSMUST00000022196.5|Ap3b1|ENSMUSG00000021686.7|adaptor-related protein complex 3, beta 1 subunit
mm39_v1_chr7_-_131012202_131012250	0.252825	CUUUGGU	ENSMUST00000207243.2|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5	ENSMUST00000128432.3|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5	ENSMUST00000121033.8|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5	ENSMUST00000046306.15|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5
mm39_v1_chr9_-_56151334_56151382	0.2518	CUUUGGU	ENSMUST00000188142.7|Peak1|ENSMUSG00000074305.10|pseudopodium-enriched atypical kinase 1
mm39_v1_chr2_-_104324745_104324809	0.244456	CUUUGGU	ENSMUST00000028600.14|Hipk3|ENSMUSG00000027177.15|homeodomain interacting protein kinase 3
mm39_v1_chr1_-_135513443_135513555	0.242625	CUUUGGU	ENSMUST00000067414.13|Nav1|ENSMUSG00000009418.17|neuron navigator 1
mm39_v1_chr4_+_53779694_53779722	0.238817	CUUUGGU	ENSMUST00000030124.4|Tal2|ENSMUSG00000028417.4|T cell acute lymphocytic leukemia 2
mm39_v1_chr3_+_96011810_96011883	0.238595	CUUUGGU	ENSMUST00000132980.8|Otud7b|ENSMUSG00000038495.15|OTU domain containing 7B	ENSMUST00000138206.8|Otud7b|ENSMUSG00000038495.15|OTU domain containing 7B	ENSMUST00000090785.9|Otud7b|ENSMUSG00000038495.15|OTU domain containing 7B	ENSMUST00000035519.12|Otud7b|ENSMUSG00000038495.15|OTU domain containing 7B
mm39_v1_chr11_-_120269517_120269605	0.23259	CUUUGGU	ENSMUST00000026448.10|Faap100|ENSMUSG00000025384.16|Fanconi anemia core complex associated protein 100
mm39_v1_chr4_+_152358648_152358819	0.232062	CUUUGGU	ENSMUST00000105650.8|Gpr153|ENSMUSG00000042804.14|G protein-coupled receptor 153	ENSMUST00000105651.8|Gpr153|ENSMUSG00000042804.14|G protein-coupled receptor 153
mm39_v1_chr8_-_23083751_23083792	0.231567	CUUUGGU	ENSMUST00000009036.11|Vdac3|ENSMUSG00000008892.13|voltage-dependent anion channel 3
mm39_v1_chr8_-_84874468_84874571	0.229037	CUUUGGU	ENSMUST00000117424.9|Cc2d1a|ENSMUSG00000036686.17|coiled-coil and C2 domain containing 1A	ENSMUST00000040383.9|Cc2d1a|ENSMUSG00000036686.17|coiled-coil and C2 domain containing 1A
mm39_v1_chr3_+_137770813_137770839	0.224636	CUUUGGU	ENSMUST00000163080.3|1110002E22Rik|ENSMUSG00000090066.3|RIKEN cDNA 1110002E22 gene
mm39_v1_chr18_-_84607615_84607652	0.221393	CUUUGGU	ENSMUST00000125763.3|Zfp407|ENSMUSG00000048410.18|zinc finger protein 407
mm39_v1_chr8_+_109441276_109441276	0.214646	CUUUGGU	ENSMUST00000043896.10|Zfhx3|ENSMUSG00000038872.11|zinc finger homeobox 3
mm39_v1_chr6_+_119152210_119152256	0.214341	CUUUGGU	ENSMUST00000112777.9|Dcp1b|ENSMUSG00000041477.15|decapping mRNA 1B	ENSMUST00000073909.6|Dcp1b|ENSMUSG00000041477.15|decapping mRNA 1B
mm39_v1_chr4_-_129636073_129636106	0.214181	CUUUGGU	ENSMUST00000066257.6|Khdrbs1|ENSMUSG00000028790.14|KH domain containing, RNA binding, signal transduction associated 1
mm39_v1_chr6_+_122285615_122285679	0.210972	CUUUGGU	ENSMUST00000007602.15|M6pr|ENSMUSG00000007458.15|mannose-6-phosphate receptor, cation dependent	ENSMUST00000112610.2|M6pr|ENSMUSG00000007458.15|mannose-6-phosphate receptor, cation dependent
mm39_v1_chr1_-_155848917_155849012	0.209324	CUUUGGU	ENSMUST00000138762.8|Cep350|ENSMUSG00000033671.19|centrosomal protein 350
mm39_v1_chr1_+_167516771_167516806	0.209244	CUUUGGU	ENSMUST00000111377.8|Lmx1a|ENSMUSG00000026686.15|LIM homeobox transcription factor 1 alpha
mm39_v1_chr2_-_45003270_45003296	0.204894	CUUUGGU	ENSMUST00000202935.4|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000068415.11|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000127520.8|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2
mm39_v1_chr10_+_80591030_80591073	0.20417	CUUUGGU	ENSMUST00000105336.9|Dot1l|ENSMUSG00000061589.15|DOT1-like, histone H3 methyltransferase (S. cerevisiae)
mm39_v1_chr5_+_137517140_137517140	0.199623	CUUUGGU	ENSMUST00000031727.10|Gigyf1|ENSMUSG00000029714.12|GRB10 interacting GYF protein 1
mm39_v1_chr19_+_56536685_56536716	0.198221	CUUUGGU	ENSMUST00000071423.7|Nhlrc2|ENSMUSG00000025078.10|NHL repeat containing 2
mm39_v1_chr17_+_69690018_69690061	0.190746	CUUUGGU	ENSMUST00000112674.8|Zbtb14|ENSMUSG00000049672.16|zinc finger and BTB domain containing 14
mm39_v1_chr3_-_144426076_144426097	0.185664	CUUUGGU	ENSMUST00000198254.5|Sh3glb1|ENSMUSG00000037062.14|SH3-domain GRB2-like B1 (endophilin)	ENSMUST00000163279.6|Sh3glb1|ENSMUSG00000037062.14|SH3-domain GRB2-like B1 (endophilin)
mm39_v1_chr8_+_13209141_13209161	0.173213	CUUUGGU	ENSMUST00000033824.8|Lamp1|ENSMUSG00000031447.8|lysosomal-associated membrane protein 1
mm39_v1_chr8_-_81466126_81466126	0.172933	CUUUGGU	ENSMUST00000043359.9|Smarca5|ENSMUSG00000031715.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
mm39_v1_chr11_+_94218810_94218858	0.165843	CUUUGGU	ENSMUST00000107818.9|Ankrd40|ENSMUSG00000020864.14|ankyrin repeat domain 40	ENSMUST00000051221.13|Ankrd40|ENSMUSG00000020864.14|ankyrin repeat domain 40
mm39_v1_chr2_+_20742115_20742152	0.161899	CUUUGGU	ENSMUST00000114606.8|Etl4|ENSMUSG00000036617.18|enhancer trap locus 4	ENSMUST00000114608.3|Etl4|ENSMUSG00000036617.18|enhancer trap locus 4
mm39_v1_chr17_-_46867083_46867114	0.156705	CUUUGGU	ENSMUST00000015749.7|Srf|ENSMUSG00000015605.7|serum response factor
mm39_v1_chr12_-_111874489_111874559	0.155526	CUUUGGU	ENSMUST00000054815.15|Ppp1r13b|ENSMUSG00000021285.16|protein phosphatase 1, regulatory subunit 13B
mm39_v1_chr4_+_11191726_11191790	0.155224	CUUUGGU	ENSMUST00000029866.16|Ccne2|ENSMUSG00000028212.17|cyclin E2	ENSMUST00000108324.4|Ccne2|ENSMUSG00000028212.17|cyclin E2
mm39_v1_chr6_-_71417607_71417630	0.146613	CUUUGGU	ENSMUST00000002292.15|Rmnd5a|ENSMUSG00000002222.15|required for meiotic nuclear division 5 homolog A
mm39_v1_chr3_+_69224189_69224202	0.145252	CUUUGGU	ENSMUST00000029355.9|Ppm1l|ENSMUSG00000027784.11|protein phosphatase 1 (formerly 2C)-like
mm39_v1_chr19_+_45003304_45003445	0.144658	CUUUGGU	ENSMUST00000039016.14|Lzts2|ENSMUSG00000035342.15|leucine zipper, putative tumor suppressor 2
mm39_v1_chr6_-_114898739_114898798	0.142181	CUUUGGU	ENSMUST00000032459.14|Vgll4|ENSMUSG00000030315.16|vestigial like family member 4
mm39_v1_chr17_-_28039588_28039662	0.139351	CUUUGGU	ENSMUST00000114863.10|Ilrun|ENSMUSG00000056692.14|inflammation and lipid regulator with UBA-like and NBR1-like domains	ENSMUST00000233131.2|Ilrun|ENSMUSG00000056692.14|inflammation and lipid regulator with UBA-like and NBR1-like domains
mm39_v1_chr16_-_75563645_75563709	0.138825	CUUUGGU	ENSMUST00000114244.2|Hspa13|ENSMUSG00000032932.16|heat shock protein 70 family, member 13	ENSMUST00000046283.16|Hspa13|ENSMUSG00000032932.16|heat shock protein 70 family, member 13
mm39_v1_chr2_-_37333109_37333210	0.137374	CUUUGGU	ENSMUST00000102789.3|Zbtb26|ENSMUSG00000050714.10|zinc finger and BTB domain containing 26	ENSMUST00000067043.5|Zbtb26|ENSMUSG00000050714.10|zinc finger and BTB domain containing 26	ENSMUST00000112932.2|Zbtb6|ENSMUSG00000066798.4|zinc finger and BTB domain containing 6
mm39_v1_chr5_+_43390513_43390580	0.131235	CUUUGGU	ENSMUST00000166713.9|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2	ENSMUST00000169035.8|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2	ENSMUST00000114065.9|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2
mm39_v1_chr7_+_12699757_12699821	0.131055	CUUUGGU	ENSMUST00000038701.8|Zfp324|ENSMUSG00000004500.10|zinc finger protein 324
mm39_v1_chr10_-_20600797_20600824	0.129427	CUUUGGU	ENSMUST00000020165.14|Pde7b|ENSMUSG00000019990.16|phosphodiesterase 7B
mm39_v1_chr6_-_72593983_72593983	0.129157	CUUUGGU	ENSMUST00000070524.5|Tgoln1|ENSMUSG00000056429.5|trans-golgi network protein
mm39_v1_chr12_+_86407886_86407905	0.122968	CUUUGGU	ENSMUST00000116402.10|Esrrb|ENSMUSG00000021255.18|estrogen related receptor, beta
mm39_v1_chr16_+_17051423_17051528	0.118421	CUUUGGU	ENSMUST00000090190.14|Hic2|ENSMUSG00000050240.17|hypermethylated in cancer 2	ENSMUST00000232426.2|Gm49573|ENSMUSG00000116743.2|predicted gene, 49573	ENSMUST00000232082.2|Hic2|ENSMUSG00000050240.17|hypermethylated in cancer 2
mm39_v1_chr10_-_117212860_117212883	0.116876	CUUUGGU	ENSMUST00000069168.13|Cpsf6|ENSMUSG00000055531.13|cleavage and polyadenylation specific factor 6	ENSMUST00000176686.8|Cpsf6|ENSMUSG00000055531.13|cleavage and polyadenylation specific factor 6
mm39_v1_chr1_-_164285914_164285932	0.114446	CUUUGGU	ENSMUST00000027863.13|Atp1b1|ENSMUSG00000026576.13|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm39_v1_chr15_+_85619958_85620010	0.107431	CUUUGGU	ENSMUST00000109422.8|Ppara|ENSMUSG00000022383.14|peroxisome proliferator activated receptor alpha
mm39_v1_chr14_-_76348179_76348271	0.107164	CUUUGGU	ENSMUST00000022585.5|Gpalpp1|ENSMUSG00000022008.5|GPALPP motifs containing 1
mm39_v1_chr8_-_4325886_4325915	0.105223	CUUUGGU	ENSMUST00000003029.14|Timm44|ENSMUSG00000002949.16|translocase of inner mitochondrial membrane 44
mm39_v1_chr10_-_128532126_128532142	0.104097	CUUUGGU	ENSMUST00000000727.4|Rab5b|ENSMUSG00000000711.4|RAB5B, member RAS oncogene family
mm39_v1_chr8_+_80366247_80366333	0.10305	CUUUGGU	ENSMUST00000173078.8|Otud4|ENSMUSG00000036990.14|OTU domain containing 4	ENSMUST00000173286.8|Otud4|ENSMUSG00000036990.14|OTU domain containing 4
mm39_v1_chr17_+_78507669_78507687	0.101935	CUUUGGU	ENSMUST00000112498.3|Crim1|ENSMUSG00000024074.9|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm39_v1_chr9_+_59198829_59198896	0.0958453	CUUUGGU	ENSMUST00000217570.2|Adpgk|ENSMUSG00000025236.12|ADP-dependent glucokinase	ENSMUST00000026266.9|Adpgk|ENSMUSG00000025236.12|ADP-dependent glucokinase
mm39_v1_chr2_+_109721189_109721226	0.0945033	CUUUGGU	ENSMUST00000028583.8|Lin7c|ENSMUSG00000027162.8|lin-7 homolog C (C. elegans)
mm39_v1_chr2_+_126850613_126850680	0.0888036	CUUUGGU	ENSMUST00000110394.8|Ap4e1|ENSMUSG00000001998.16|adaptor-related protein complex AP-4, epsilon 1	ENSMUST00000002063.15|Ap4e1|ENSMUSG00000001998.16|adaptor-related protein complex AP-4, epsilon 1
mm39_v1_chr5_-_36954064_36954116	0.0857488	CUUUGGU	ENSMUST00000068795.4|Mrfap1|ENSMUSG00000055302.6|Morf4 family associated protein 1
mm39_v1_chr6_+_149310471_149310593	0.0824985	CUUUGGU	ENSMUST00000086829.11|Bicd1|ENSMUSG00000003452.16|BICD cargo adaptor 1	ENSMUST00000111513.9|Bicd1|ENSMUSG00000003452.16|BICD cargo adaptor 1
mm39_v1_chr2_-_34645241_34645268	0.0804828	CUUUGGU	ENSMUST00000102800.9|Gapvd1|ENSMUSG00000026867.20|GTPase activating protein and VPS9 domains 1
mm39_v1_chr15_+_101071948_101072029	0.0788991	CUUUGGU	ENSMUST00000000544.12|Acvr1b|ENSMUSG00000000532.12|activin A receptor, type 1B
mm39_v1_chr6_+_140568366_140568389	0.0774908	CUUUGGU	ENSMUST00000032359.15|Aebp2|ENSMUSG00000030232.19|AE binding protein 2
mm39_v1_chr2_+_158251761_158251783	0.0710392	CUUUGGU	ENSMUST00000109486.9|Ralgapb|ENSMUSG00000027652.16|Ral GTPase activating protein, beta subunit (non-catalytic)	ENSMUST00000046274.12|Ralgapb|ENSMUSG00000027652.16|Ral GTPase activating protein, beta subunit (non-catalytic)
mm39_v1_chr6_+_146992877_146993036	0.0694775	CUUUGGU	ENSMUST00000036003.8|Klhl42|ENSMUSG00000040102.11|kelch-like 42
mm39_v1_chr17_+_46471950_46471997	0.060165	CUUUGGU	ENSMUST00000024748.14|Gtpbp2|ENSMUSG00000023952.14|GTP binding protein 2	ENSMUST00000172170.8|Gtpbp2|ENSMUSG00000023952.14|GTP binding protein 2
mm39_v1_chr3_-_27950491_27950540	0.0566703	CUUUGGU	ENSMUST00000058077.4|Tmem212|ENSMUSG00000043164.4|transmembrane protein 212
mm39_v1_chr4_-_149511059_149511206	0.0487974	CUUUGGU	ENSMUST00000103212.10|Ube4b|ENSMUSG00000028960.21|ubiquitination factor E4B
mm39_v1_chr15_+_66449385_66449487	0.0455565	CUUUGGU	ENSMUST00000230882.2|Phf20l1|ENSMUSG00000072501.6|PHD finger protein 20-like 1	ENSMUST00000048188.10|Phf20l1|ENSMUSG00000072501.6|PHD finger protein 20-like 1	ENSMUST00000230948.2|Phf20l1|ENSMUSG00000072501.6|PHD finger protein 20-like 1	ENSMUST00000229160.2|Phf20l1|ENSMUSG00000072501.6|PHD finger protein 20-like 1
mm39_v1_chr2_+_90575714_90575813	0.0431015	CUUUGGU	ENSMUST00000238890.2|Fnbp4|ENSMUSG00000008200.16|formin binding protein 4	ENSMUST00000013759.6|Fnbp4|ENSMUSG00000008200.16|formin binding protein 4
mm39_v1_chr4_+_19605451_19605451	0.0387917	CUUUGGU	ENSMUST00000108250.3|Gm12353|ENSMUSG00000078772.3|predicted gene 12353
mm39_v1_chr5_+_29774205_29774265	0.0296462	CUUUGGU	ENSMUST00000049453.9|Ube3c|ENSMUSG00000039000.9|ubiquitin protein ligase E3C
mm39_v1_chr1_-_155293075_155293104	0.0267394	CUUUGGU	ENSMUST00000027741.12|Xpr1|ENSMUSG00000026469.15|xenotropic and polytropic retrovirus receptor 1
mm39_v1_chr11_-_20781009_20781056	0.0256429	CUUUGGU	ENSMUST00000047028.9|Lgalsl|ENSMUSG00000042363.15|lectin, galactoside binding-like
mm39_v1_chr8_-_35432783_35432869	0.0235101	CUUUGGU	ENSMUST00000033929.6|Tnks|ENSMUSG00000031529.6|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
mm39_v1_chr1_+_120530134_120530147	0.0226927	CUUUGGU	ENSMUST00000079721.9|En1|ENSMUSG00000058665.9|engrailed 1
mm39_v1_chr3_+_152101618_152101697	0.0223471	CUUUGGU	ENSMUST00000106100.9|Zzz3|ENSMUSG00000039068.17|zinc finger, ZZ domain containing 3
mm39_v1_chr5_-_34093678_34093757	0.0222126	CUUUGGU	ENSMUST00000030993.8|Nelfa|ENSMUSG00000029111.8|negative elongation factor complex member A, Whsc2
mm39_v1_chr2_+_30254239_30254316	0.0219959	CUUUGGU	ENSMUST00000077977.14|Miga2|ENSMUSG00000026858.19|mitoguardin 2	ENSMUST00000140075.9|Miga2|ENSMUSG00000026858.19|mitoguardin 2	ENSMUST00000142801.8|Miga2|ENSMUSG00000026858.19|mitoguardin 2	ENSMUST00000100214.10|Miga2|ENSMUSG00000026858.19|mitoguardin 2
mm39_v1_chr4_-_141450710_141450747	0.0146534	CUUUGGU	ENSMUST00000102484.5|Ddi2|ENSMUSG00000078515.5|DNA-damage inducible protein 2	ENSMUST00000177592.2|Ddi2|ENSMUSG00000078515.5|DNA-damage inducible protein 2
mm39_v1_chr11_-_58059293_58059370	0.0120193	CUUUGGU	ENSMUST00000172035.8|Gemin5|ENSMUSG00000037275.15|gem nuclear organelle associated protein 5	ENSMUST00000035604.13|Gemin5|ENSMUSG00000037275.15|gem nuclear organelle associated protein 5	ENSMUST00000102711.9|Gemin5|ENSMUSG00000037275.15|gem nuclear organelle associated protein 5
mm39_v1_chr17_+_74796473_74796570	0.00940206	CUUUGGU	ENSMUST00000024873.7|Yipf4|ENSMUSG00000024072.10|Yip1 domain family, member 4
mm39_v1_chr14_-_31923803_31923867	0.00526196	CUUUGGU	ENSMUST00000226683.2|Timm23|ENSMUSG00000013701.14|translocase of inner mitochondrial membrane 23	ENSMUST00000170331.8|Timm23|ENSMUSG00000013701.14|translocase of inner mitochondrial membrane 23	ENSMUST00000013845.13|Timm23|ENSMUSG00000013701.14|translocase of inner mitochondrial membrane 23
mm39_v1_chr3_-_63872189_63872208	0.000461811	CUUUGGU	ENSMUST00000029402.15|Slc33a1|ENSMUSG00000027822.17|solute carrier family 33 (acetyl-CoA transporter), member 1
