mm39_v1_chr11_-_42073737_42073762	7.04655	GGAAGAC	ENSMUST00000206085.2|Gabra1|ENSMUSG00000010803.14|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	ENSMUST00000020707.12|Gabra1|ENSMUSG00000010803.14|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	ENSMUST00000132971.3|Gabra1|ENSMUSG00000010803.14|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
mm39_v1_chr6_-_42301574_42301606	6.47226	GGAAGAC	ENSMUST00000031891.15|Fam131b|ENSMUSG00000029861.18|family with sequence similarity 131, member B	ENSMUST00000143278.8|Fam131b|ENSMUSG00000029861.18|family with sequence similarity 131, member B
mm39_v1_chr2_-_155356716_155356775	5.92736	GGAAGAC	ENSMUST00000029131.11|Ggt7|ENSMUSG00000027603.16|gamma-glutamyltransferase 7
mm39_v1_chr4_-_15149051_15149131	5.82673	GGAAGAC	ENSMUST00000041606.14|Necab1|ENSMUSG00000040536.16|N-terminal EF-hand calcium binding protein 1
mm39_v1_chr6_-_60806810_60806839	5.7885	GGAAGAC	ENSMUST00000163779.8|Snca|ENSMUSG00000025889.14|synuclein, alpha
mm39_v1_chr10_-_80861239_80861246	5.64066	GGAAGAC	ENSMUST00000055125.5|Diras1|ENSMUSG00000043670.5|DIRAS family, GTP-binding RAS-like 1
mm39_v1_chr7_+_3381434_3381471	5.38643	GGAAGAC	ENSMUST00000092891.6|Cacng7|ENSMUSG00000069806.6|calcium channel, voltage-dependent, gamma subunit 7
mm39_v1_chr7_+_43959637_43959677	5.37199	GGAAGAC	ENSMUST00000107938.8|Shank1|ENSMUSG00000038738.16|SH3 and multiple ankyrin repeat domains 1
mm39_v1_chr9_-_21963306_21963322	5.11098	GGAAGAC	ENSMUST00000003501.9|Elavl3|ENSMUSG00000003410.9|ELAV like RNA binding protein 3	ENSMUST00000215901.2|Elavl3|ENSMUSG00000003410.9|ELAV like RNA binding protein 3
mm39_v1_chr6_+_86055048_86055071	4.99363	GGAAGAC	ENSMUST00000032069.8|Add2|ENSMUSG00000030000.11|adducin 2 (beta)
mm39_v1_chrX_-_69408627_69408718	4.58064	GGAAGAC	ENSMUST00000101509.9|Ids|ENSMUSG00000035847.16|iduronate 2-sulfatase
mm39_v1_chr3_-_57755500_57755519	4.5688	GGAAGAC	ENSMUST00000066882.10|Pfn2|ENSMUSG00000027805.17|profilin 2
mm39_v1_chr13_-_105191403_105191438	4.52735	GGAAGAC	ENSMUST00000063551.7|Rgs7bp|ENSMUSG00000021719.10|regulator of G-protein signalling 7 binding protein
mm39_v1_chr19_+_5348329_5348384	4.48372	GGAAGAC	ENSMUST00000061169.7|Gal3st3|ENSMUSG00000047658.7|galactose-3-O-sulfotransferase 3
mm39_v1_chr17_+_27874519_27874542	4.2609	GGAAGAC	ENSMUST00000045896.11|Pacsin1|ENSMUSG00000040276.16|protein kinase C and casein kinase substrate in neurons 1
mm39_v1_chr11_-_75686874_75686907	4.19482	GGAAGAC	ENSMUST00000021209.8|Doc2b|ENSMUSG00000020848.8|double C2, beta
mm39_v1_chr7_-_64806164_64806318	4.03843	GGAAGAC	ENSMUST00000148459.3|Fam189a1|ENSMUSG00000030518.18|family with sequence similarity 189, member A1	ENSMUST00000119118.8|Fam189a1|ENSMUSG00000030518.18|family with sequence similarity 189, member A1
mm39_v1_chr13_+_117738972_117739018	3.74906	GGAAGAC	ENSMUST00000006991.9|Hcn1|ENSMUSG00000021730.9|hyperpolarization activated cyclic nucleotide gated potassium channel 1
mm39_v1_chr9_+_45029080_45029179	3.3796	GGAAGAC	ENSMUST00000170998.9|Scn2b|ENSMUSG00000070304.13|sodium channel, voltage-gated, type II, beta	ENSMUST00000093855.4|Scn2b|ENSMUSG00000070304.13|sodium channel, voltage-gated, type II, beta
mm39_v1_chr3_+_108498595_108498727	3.23157	GGAAGAC	ENSMUST00000051145.15|Wdr47|ENSMUSG00000040389.16|WD repeat domain 47
mm39_v1_chr1_+_153528689_153528771	3.20798	GGAAGAC	ENSMUST00000041776.12|Rgs8|ENSMUSG00000042671.13|regulator of G-protein signaling 8
mm39_v1_chr12_-_81827893_81827949	3.03991	GGAAGAC	ENSMUST00000035987.9|Map3k9|ENSMUSG00000042724.9|mitogen-activated protein kinase kinase kinase 9
mm39_v1_chr7_-_43139390_43139499	2.89475	GGAAGAC	ENSMUST00000107974.3|Iglon5|ENSMUSG00000013367.6|IgLON family member 5
mm39_v1_chr1_-_173195236_173195261	2.8431	GGAAGAC	ENSMUST00000005470.5|Cadm3|ENSMUSG00000005338.15|cell adhesion molecule 3	ENSMUST00000111220.8|Cadm3|ENSMUSG00000005338.15|cell adhesion molecule 3
mm39_v1_chr13_+_110039620_110039645	2.83258	GGAAGAC	ENSMUST00000120664.8|Pde4d|ENSMUSG00000021699.18|phosphodiesterase 4D, cAMP specific
mm39_v1_chr15_+_41652777_41652913	2.7608	GGAAGAC	ENSMUST00000230778.2|Oxr1|ENSMUSG00000022307.17|oxidation resistance 1	ENSMUST00000022918.15|Oxr1|ENSMUSG00000022307.17|oxidation resistance 1	ENSMUST00000090095.13|Oxr1|ENSMUSG00000022307.17|oxidation resistance 1
mm39_v1_chr4_-_119349760_119349825	2.60422	GGAAGAC	ENSMUST00000049994.8|Rimkla|ENSMUSG00000048899.9|ribosomal modification protein rimK-like family member A
mm39_v1_chr12_+_95658987_95659011	2.49162	GGAAGAC	ENSMUST00000057324.4|Flrt2|ENSMUSG00000047414.7|fibronectin leucine rich transmembrane protein 2
mm39_v1_chr11_+_110956980_110957000	2.30383	GGAAGAC	ENSMUST00000042970.3|Kcnj2|ENSMUSG00000041695.3|potassium inwardly-rectifying channel, subfamily J, member 2
mm39_v1_chr16_+_6166982_6167008	2.27332	GGAAGAC	ENSMUST00000056416.9|Rbfox1|ENSMUSG00000008658.17|RNA binding protein, fox-1 homolog (C. elegans) 1
mm39_v1_chr12_+_84498196_84498292	2.27072	GGAAGAC	ENSMUST00000137170.3|Lin52|ENSMUSG00000085793.3|lin-52 homolog (C. elegans)
mm39_v1_chr18_+_36926929_36926992	2.24079	GGAAGAC	ENSMUST00000001419.10|Zmat2|ENSMUSG00000001383.10|zinc finger, matrin type 2
mm39_v1_chr6_+_85408953_85408991	2.20856	GGAAGAC	ENSMUST00000045693.8|Smyd5|ENSMUSG00000033706.14|SET and MYND domain containing 5
mm39_v1_chr18_+_59308722_59308722	2.18456	GGAAGAC	ENSMUST00000080721.6|Chsy3|ENSMUSG00000058152.9|chondroitin sulfate synthase 3
mm39_v1_chr4_+_48045143_48045160	2.16864	GGAAGAC	ENSMUST00000030025.10|Nr4a3|ENSMUSG00000028341.10|nuclear receptor subfamily 4, group A, member 3
mm39_v1_chr11_-_118800314_118800398	2.15035	GGAAGAC	ENSMUST00000117731.8|Rbfox3|ENSMUSG00000025576.18|RNA binding protein, fox-1 homolog (C. elegans) 3	ENSMUST00000106278.9|Rbfox3|ENSMUSG00000025576.18|RNA binding protein, fox-1 homolog (C. elegans) 3	ENSMUST00000120061.8|Rbfox3|ENSMUSG00000025576.18|RNA binding protein, fox-1 homolog (C. elegans) 3	ENSMUST00000017576.11|Rbfox3|ENSMUSG00000025576.18|RNA binding protein, fox-1 homolog (C. elegans) 3
mm39_v1_chr6_-_136150076_136150146	2.07378	GGAAGAC	ENSMUST00000053880.13|Grin2b|ENSMUSG00000030209.15|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm39_v1_chr17_-_52139693_52139706	2.04531	GGAAGAC	ENSMUST00000144331.8|Satb1|ENSMUSG00000023927.16|special AT-rich sequence binding protein 1
mm39_v1_chr6_-_119307685_119307761	2.02576	GGAAGAC	ENSMUST00000112756.8|Lrtm2|ENSMUSG00000055003.15|leucine-rich repeats and transmembrane domains 2	ENSMUST00000068351.14|Lrtm2|ENSMUSG00000055003.15|leucine-rich repeats and transmembrane domains 2
mm39_v1_chr15_-_78602971_78602971	1.99606	GGAAGAC	ENSMUST00000088592.6|Elfn2|ENSMUSG00000043460.8|leucine rich repeat and fibronectin type III, extracellular 2
mm39_v1_chr5_+_146321757_146321804	1.96337	GGAAGAC	ENSMUST00000016143.9|Wasf3|ENSMUSG00000029636.12|WASP family, member 3
mm39_v1_chr2_+_105499233_105499259	1.90547	GGAAGAC	ENSMUST00000111086.11|Pax6|ENSMUSG00000027168.22|paired box 6	ENSMUST00000111087.10|Pax6|ENSMUSG00000027168.22|paired box 6
mm39_v1_chr7_+_109617456_109617481	1.87494	GGAAGAC	ENSMUST00000084731.5|Ipo7|ENSMUSG00000066232.5|importin 7
mm39_v1_chr8_-_47805383_47805401	1.86006	GGAAGAC	ENSMUST00000110367.10|Stox2|ENSMUSG00000038143.17|storkhead box 2
mm39_v1_chr8_-_17585263_17585335	1.78666	GGAAGAC	ENSMUST00000082104.7|Csmd1|ENSMUSG00000060924.16|CUB and Sushi multiple domains 1
mm39_v1_chr2_-_92264374_92264398	1.67461	GGAAGAC	ENSMUST00000111278.2|Cry2|ENSMUSG00000068742.12|cryptochrome 2 (photolyase-like)	ENSMUST00000090559.12|Cry2|ENSMUSG00000068742.12|cryptochrome 2 (photolyase-like)
mm39_v1_chr9_+_113641615_113641685	1.67329	GGAAGAC	ENSMUST00000111838.10|Clasp2|ENSMUSG00000033392.17|CLIP associating protein 2	ENSMUST00000166734.10|Clasp2|ENSMUSG00000033392.17|CLIP associating protein 2	ENSMUST00000214522.2|Clasp2|ENSMUSG00000033392.17|CLIP associating protein 2	ENSMUST00000163895.3|Clasp2|ENSMUSG00000033392.17|CLIP associating protein 2
mm39_v1_chr11_+_102652228_102652275	1.67107	GGAAGAC	ENSMUST00000103081.10|Adam11|ENSMUSG00000020926.17|a disintegrin and metallopeptidase domain 11	ENSMUST00000068150.7|Adam11|ENSMUSG00000020926.17|a disintegrin and metallopeptidase domain 11
mm39_v1_chr14_-_65335479_65335555	1.58206	GGAAGAC	ENSMUST00000225633.2|Extl3|ENSMUSG00000021978.10|exostosin-like glycosyltransferase 3	ENSMUST00000022550.8|Extl3|ENSMUSG00000021978.10|exostosin-like glycosyltransferase 3
mm39_v1_chr11_+_100465730_100465808	1.57767	GGAAGAC	ENSMUST00000103120.5|Cnp|ENSMUSG00000006782.17|2',3'-cyclic nucleotide 3' phosphodiesterase
mm39_v1_chr13_+_45660905_45660994	1.57193	GGAAGAC	ENSMUST00000000260.13|Gmpr|ENSMUSG00000000253.14|guanosine monophosphate reductase
mm39_v1_chr13_+_42862957_42863057	1.53252	GGAAGAC	ENSMUST00000066928.12|Phactr1|ENSMUSG00000054728.18|phosphatase and actin regulator 1	ENSMUST00000148891.8|Phactr1|ENSMUSG00000054728.18|phosphatase and actin regulator 1
mm39_v1_chr7_+_100355798_100355909	1.49768	GGAAGAC	ENSMUST00000107042.9|Fam168a|ENSMUSG00000029461.18|family with sequence similarity 168, member A	ENSMUST00000207564.2|Fam168a|ENSMUSG00000029461.18|family with sequence similarity 168, member A	ENSMUST00000049053.9|Fam168a|ENSMUSG00000029461.18|family with sequence similarity 168, member A
mm39_v1_chr3_+_138231935_138231940	1.49038	GGAAGAC	ENSMUST00000029803.12|Eif4e|ENSMUSG00000028156.13|eukaryotic translation initiation factor 4E
mm39_v1_chr1_-_16727067_16727121	1.48818	GGAAGAC	ENSMUST00000188641.7|Eloc|ENSMUSG00000079658.10|elongin C
mm39_v1_chr2_-_34716083_34716099	1.47104	GGAAGAC	ENSMUST00000113077.8|Fbxw2|ENSMUSG00000035949.16|F-box and WD-40 domain protein 2	ENSMUST00000028220.10|Fbxw2|ENSMUSG00000035949.16|F-box and WD-40 domain protein 2
mm39_v1_chr15_+_99599978_99600010	1.44589	GGAAGAC	ENSMUST00000023759.6|Smarcd1|ENSMUSG00000023018.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm39_v1_chr7_+_121888520_121888563	1.40834	GGAAGAC	ENSMUST00000064989.12|Prkcb|ENSMUSG00000052889.12|protein kinase C, beta	ENSMUST00000064921.5|Prkcb|ENSMUSG00000052889.12|protein kinase C, beta
mm39_v1_chr6_+_96090127_96090153	1.38567	GGAAGAC	ENSMUST00000122120.8|Tafa1|ENSMUSG00000059187.13|TAFA chemokine like family member 1
mm39_v1_chr10_+_85857726_85857924	1.3137	GGAAGAC	ENSMUST00000130320.8|Fbxo7|ENSMUSG00000001786.15|F-box protein 7
mm39_v1_chr4_-_135221926_135221939	1.30504	GGAAGAC	ENSMUST00000102549.10|Nipal3|ENSMUSG00000028803.19|NIPA-like domain containing 3
mm39_v1_chr5_-_31453206_31453424	1.28086	GGAAGAC	ENSMUST00000041266.11|Fndc4|ENSMUSG00000038552.15|fibronectin type III domain containing 4	ENSMUST00000172435.8|Fndc4|ENSMUSG00000038552.15|fibronectin type III domain containing 4	ENSMUST00000201417.2|Fndc4|ENSMUSG00000038552.15|fibronectin type III domain containing 4
mm39_v1_chr17_+_70276068_70276083	1.27122	GGAAGAC	ENSMUST00000133983.8|Dlgap1|ENSMUSG00000003279.18|DLG associated protein 1
mm39_v1_chr2_-_167032068_167032093	1.25651	GGAAGAC	ENSMUST00000059826.10|Kcnb1|ENSMUSG00000050556.10|potassium voltage gated channel, Shab-related subfamily, member 1
mm39_v1_chr1_-_143652711_143652806	1.25524	GGAAGAC	ENSMUST00000159879.2|Ro60|ENSMUSG00000018199.10|Ro60, Y RNA binding protein
mm39_v1_chr4_-_149783097_149783165	1.22987	GGAAGAC	ENSMUST00000038859.14|Pik3cd|ENSMUSG00000039936.19|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta	ENSMUST00000105690.9|Pik3cd|ENSMUSG00000039936.19|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
mm39_v1_chr15_-_48655329_48655459	1.20465	GGAAGAC	ENSMUST00000160658.8|Csmd3|ENSMUSG00000022311.16|CUB and Sushi multiple domains 3	ENSMUST00000100670.10|Csmd3|ENSMUSG00000022311.16|CUB and Sushi multiple domains 3	ENSMUST00000162830.8|Csmd3|ENSMUSG00000022311.16|CUB and Sushi multiple domains 3
mm39_v1_chr15_-_98661076_98661101	1.20109	GGAAGAC	ENSMUST00000053183.12|Arf3|ENSMUSG00000051853.11|ADP-ribosylation factor 3
mm39_v1_chr16_+_32427738_32427763	1.1552	GGAAGAC	ENSMUST00000023486.15|Tfrc|ENSMUSG00000022797.17|transferrin receptor
mm39_v1_chr11_-_79037213_79037236	1.09952	GGAAGAC	ENSMUST00000018478.11|Ksr1|ENSMUSG00000018334.19|kinase suppressor of ras 1	ENSMUST00000108264.8|Ksr1|ENSMUSG00000018334.19|kinase suppressor of ras 1
mm39_v1_chr3_+_123240562_123240562	1.09404	GGAAGAC	ENSMUST00000029603.10|Prss12|ENSMUSG00000027978.10|protease, serine 12 neurotrypsin (motopsin)
mm39_v1_chr13_+_75237939_75237952	1.07707	GGAAGAC	ENSMUST00000022075.6|Pcsk1|ENSMUSG00000021587.6|proprotein convertase subtilisin/kexin type 1
mm39_v1_chr1_+_180396478_180396525	1.05931	GGAAGAC	ENSMUST00000027777.12|Parp1|ENSMUSG00000026496.12|poly (ADP-ribose) polymerase family, member 1
mm39_v1_chr8_+_13919641_13919739	1.00112	GGAAGAC	ENSMUST00000051870.8|Champ1|ENSMUSG00000047710.9|chromosome alignment maintaining phosphoprotein 1	ENSMUST00000128557.3|Champ1|ENSMUSG00000047710.9|chromosome alignment maintaining phosphoprotein 1
mm39_v1_chr11_-_102588536_102588608	0.982626	GGAAGAC	ENSMUST00000164506.3|Ccdc43|ENSMUSG00000020925.17|coiled-coil domain containing 43	ENSMUST00000092569.13|Ccdc43|ENSMUSG00000020925.17|coiled-coil domain containing 43
mm39_v1_chr11_+_52251687_52251736	0.974174	GGAAGAC	ENSMUST00000102758.8|Vdac1|ENSMUSG00000020402.12|voltage-dependent anion channel 1
mm39_v1_chr1_+_60448703_60448811	0.96957	GGAAGAC	ENSMUST00000052332.15|Abi2|ENSMUSG00000026782.16|abl interactor 2
mm39_v1_chr2_-_130480014_130480033	0.963662	GGAAGAC	ENSMUST00000089561.10|Lzts3|ENSMUSG00000037703.15|leucine zipper, putative tumor suppressor family member 3	ENSMUST00000110260.8|Lzts3|ENSMUSG00000037703.15|leucine zipper, putative tumor suppressor family member 3
mm39_v1_chr10_-_120815232_120815279	0.942657	GGAAGAC	ENSMUST00000119944.8|Lemd3|ENSMUSG00000048661.15|LEM domain containing 3	ENSMUST00000119093.2|Lemd3|ENSMUSG00000048661.15|LEM domain containing 3
mm39_v1_chr1_-_34882131_34882148	0.932549	GGAAGAC	ENSMUST00000167518.8|Fam168b|ENSMUSG00000037503.13|family with sequence similarity 168, member B	ENSMUST00000047534.12|Fam168b|ENSMUSG00000037503.13|family with sequence similarity 168, member B
mm39_v1_chr7_+_29991101_29991184	0.932036	GGAAGAC	ENSMUST00000150892.2|Clip3|ENSMUSG00000013921.16|CAP-GLY domain containing linker protein 3	ENSMUST00000126216.2|Clip3|ENSMUSG00000013921.16|CAP-GLY domain containing linker protein 3	ENSMUST00000014065.16|Clip3|ENSMUSG00000013921.16|CAP-GLY domain containing linker protein 3
mm39_v1_chr7_+_18659787_18659826	0.921012	GGAAGAC	ENSMUST00000032571.10|Nova2|ENSMUSG00000030411.17|NOVA alternative splicing regulator 2	ENSMUST00000220302.2|Nova2|ENSMUSG00000030411.17|NOVA alternative splicing regulator 2
mm39_v1_chr2_+_91560472_91560570	0.887786	GGAAGAC	ENSMUST00000099712.10|Ambra1|ENSMUSG00000040506.17|autophagy/beclin 1 regulator 1	ENSMUST00000111317.9|Ambra1|ENSMUSG00000040506.17|autophagy/beclin 1 regulator 1	ENSMUST00000111316.9|Ambra1|ENSMUSG00000040506.17|autophagy/beclin 1 regulator 1	ENSMUST00000045705.14|Ambra1|ENSMUSG00000040506.17|autophagy/beclin 1 regulator 1
mm39_v1_chr8_-_71916244_71916324	0.873424	GGAAGAC	ENSMUST00000008094.10|Abhd8|ENSMUSG00000007950.10|abhydrolase domain containing 8
mm39_v1_chr10_-_62322551_62322584	0.83941	GGAAGAC	ENSMUST00000105447.11|Vps26a|ENSMUSG00000020078.17|VPS26 retromer complex component A
mm39_v1_chr4_+_49632046_49632110	0.818147	GGAAGAC	ENSMUST00000156314.8|Rnf20|ENSMUSG00000028309.15|ring finger protein 20	ENSMUST00000167496.8|Rnf20|ENSMUSG00000028309.15|ring finger protein 20	ENSMUST00000029989.11|Rnf20|ENSMUSG00000028309.15|ring finger protein 20	ENSMUST00000146547.2|Rnf20|ENSMUSG00000028309.15|ring finger protein 20
mm39_v1_chr4_-_70453140_70453224	0.76652	GGAAGAC	ENSMUST00000107359.9|Megf9|ENSMUSG00000039270.10|multiple EGF-like-domains 9
mm39_v1_chr11_+_52122836_52122873	0.750508	GGAAGAC	ENSMUST00000037324.12|Skp1|ENSMUSG00000036309.15|S-phase kinase-associated protein 1	ENSMUST00000166537.8|Skp1|ENSMUSG00000036309.15|S-phase kinase-associated protein 1
mm39_v1_chr2_+_181162278_181162324	0.682219	GGAAGAC	ENSMUST00000072334.12|Dnajc5|ENSMUSG00000000826.17|DnaJ heat shock protein family (Hsp40) member C5
mm39_v1_chr11_+_97253221_97253377	0.681859	GGAAGAC	ENSMUST00000238729.2|Socs7|ENSMUSG00000038485.7|suppressor of cytokine signaling 7	ENSMUST00000045540.4|Socs7|ENSMUSG00000038485.7|suppressor of cytokine signaling 7
mm39_v1_chr6_+_86826470_86826577	0.669094	GGAAGAC	ENSMUST00000089519.13|Aak1|ENSMUSG00000057230.15|AP2 associated kinase 1	ENSMUST00000204414.3|Aak1|ENSMUSG00000057230.15|AP2 associated kinase 1
mm39_v1_chr7_-_126807581_126807676	0.602848	GGAAGAC	ENSMUST00000120705.3|Tbc1d10b|ENSMUSG00000042492.13|TBC1 domain family, member 10b
mm39_v1_chr17_-_66384017_66384086	0.58509	GGAAGAC	ENSMUST00000150766.2|Ankrd12|ENSMUSG00000034647.16|ankyrin repeat domain 12	ENSMUST00000038116.13|Ankrd12|ENSMUSG00000034647.16|ankyrin repeat domain 12
mm39_v1_chr16_+_3702523_3702547	0.572381	GGAAGAC	ENSMUST00000176625.8|Naa60|ENSMUSG00000005982.15|N(alpha)-acetyltransferase 60, NatF catalytic subunit	ENSMUST00000186375.8|Naa60|ENSMUSG00000005982.15|N(alpha)-acetyltransferase 60, NatF catalytic subunit
mm39_v1_chr11_+_102175757_102175857	0.566635	GGAAGAC	ENSMUST00000036376.13|Tmub2|ENSMUSG00000034757.16|transmembrane and ubiquitin-like domain containing 2	ENSMUST00000100387.11|Tmub2|ENSMUSG00000034757.16|transmembrane and ubiquitin-like domain containing 2
mm39_v1_chr1_-_151965876_151965918	0.544594	GGAAGAC	ENSMUST00000044581.14|1700025G04Rik|ENSMUSG00000032666.17|RIKEN cDNA 1700025G04 gene
mm39_v1_chr11_-_44361289_44361340	0.543332	GGAAGAC	ENSMUST00000102795.4|Ublcp1|ENSMUSG00000041231.16|ubiquitin-like domain containing CTD phosphatase 1
mm39_v1_chr11_+_101207021_101207123	0.534601	GGAAGAC	ENSMUST00000142640.8|Psme3|ENSMUSG00000078652.10|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)	ENSMUST00000019470.14|Psme3|ENSMUSG00000078652.10|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
mm39_v1_chr9_-_95393909_95394049	0.527416	GGAAGAC	ENSMUST00000190019.2|U2surp|ENSMUSG00000032407.15|U2 snRNP-associated SURP domain containing	ENSMUST00000185515.7|U2surp|ENSMUSG00000032407.15|U2 snRNP-associated SURP domain containing	ENSMUST00000217176.2|U2surp|ENSMUSG00000032407.15|U2 snRNP-associated SURP domain containing	ENSMUST00000079659.12|U2surp|ENSMUSG00000032407.15|U2 snRNP-associated SURP domain containing	ENSMUST00000078374.13|U2surp|ENSMUSG00000032407.15|U2 snRNP-associated SURP domain containing
mm39_v1_chr19_+_55304703_55304799	0.521907	GGAAGAC	ENSMUST00000225529.2|Vti1a|ENSMUSG00000024983.11|vesicle transport through interaction with t-SNAREs 1A	ENSMUST00000223690.2|Vti1a|ENSMUSG00000024983.11|vesicle transport through interaction with t-SNAREs 1A	ENSMUST00000095950.3|Vti1a|ENSMUSG00000024983.11|vesicle transport through interaction with t-SNAREs 1A
mm39_v1_chr11_-_6425877_6425917	0.509433	GGAAGAC	ENSMUST00000179343.3|Purb|ENSMUSG00000094483.3|purine rich element binding protein B
mm39_v1_chr18_-_33596792_33596853	0.500153	GGAAGAC	ENSMUST00000051087.16|Nrep|ENSMUSG00000042834.16|neuronal regeneration related protein
mm39_v1_chr8_-_111985824_111985858	0.478785	GGAAGAC	ENSMUST00000169020.8|Glg1|ENSMUSG00000003316.15|golgi apparatus protein 1	ENSMUST00000003404.9|Glg1|ENSMUSG00000003316.15|golgi apparatus protein 1
mm39_v1_chr9_+_109760528_109760554	0.478479	GGAAGAC	ENSMUST00000035055.15|Map4|ENSMUSG00000032479.16|microtubule-associated protein 4
mm39_v1_chr3_+_34074048_34074092	0.475188	GGAAGAC	ENSMUST00000001620.13|Fxr1|ENSMUSG00000027680.16|fragile X mental retardation gene 1, autosomal homolog
mm39_v1_chr12_+_85520652_85520672	0.47221	GGAAGAC	ENSMUST00000021674.7|Fos|ENSMUSG00000021250.14|FBJ osteosarcoma oncogene
mm39_v1_chr12_-_26465253_26465303	0.451885	GGAAGAC	ENSMUST00000020971.14|Rnf144a|ENSMUSG00000020642.14|ring finger protein 144A
mm39_v1_chr18_+_69478790_69478882	0.446134	GGAAGAC	ENSMUST00000202116.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000114982.8|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000078486.13|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000202772.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000201288.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4
mm39_v1_chr9_-_96634874_96634924	0.418951	GGAAGAC	ENSMUST00000152594.8|Zbtb38|ENSMUSG00000040433.17|zinc finger and BTB domain containing 38
mm39_v1_chr16_+_33005426_33005537	0.416171	GGAAGAC	ENSMUST00000232100.2|Osbpl11|ENSMUSG00000022807.10|oxysterol binding protein-like 11	ENSMUST00000232181.2|Osbpl11|ENSMUSG00000022807.10|oxysterol binding protein-like 11	ENSMUST00000039733.10|Osbpl11|ENSMUSG00000022807.10|oxysterol binding protein-like 11
mm39_v1_chrX_+_100683662_100683714	0.414048	GGAAGAC	ENSMUST00000119299.8|Ogt|ENSMUSG00000034160.14|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	ENSMUST00000044475.5|Ogt|ENSMUSG00000034160.14|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm39_v1_chr5_-_92231314_92231416	0.412911	GGAAGAC	ENSMUST00000169094.8|G3bp2|ENSMUSG00000029405.17|GTPase activating protein (SH3 domain) binding protein 2	ENSMUST00000167918.8|G3bp2|ENSMUSG00000029405.17|GTPase activating protein (SH3 domain) binding protein 2
mm39_v1_chr19_-_12773472_12773510	0.412156	GGAAGAC	ENSMUST00000038627.9|Zfp91|ENSMUSG00000024695.17|zinc finger protein 91
mm39_v1_chr11_-_61745843_61745899	0.409011	GGAAGAC	ENSMUST00000004920.4|Ulk2|ENSMUSG00000004798.15|unc-51 like kinase 2
mm39_v1_chr6_-_82629835_82629910	0.377598	GGAAGAC	ENSMUST00000160281.8|Pole4|ENSMUSG00000030042.16|polymerase (DNA-directed), epsilon 4 (p12 subunit)	ENSMUST00000095786.6|Pole4|ENSMUSG00000030042.16|polymerase (DNA-directed), epsilon 4 (p12 subunit)
mm39_v1_chr11_+_72580823_72580841	0.347031	GGAAGAC	ENSMUST00000155998.2|Ankfy1|ENSMUSG00000020790.15|ankyrin repeat and FYVE domain containing 1
mm39_v1_chr11_-_78642480_78642555	0.33578	GGAAGAC	ENSMUST00000059468.6|Ccnq|ENSMUSG00000049489.6|cyclin Q
mm39_v1_chr9_+_57496725_57496766	0.334852	GGAAGAC	ENSMUST00000053230.7|Ulk3|ENSMUSG00000032308.10|unc-51-like kinase 3
mm39_v1_chr4_-_120144546_120144546	0.333907	GGAAGAC	ENSMUST00000102656.4|Foxo6|ENSMUSG00000052135.9|forkhead box O6
mm39_v1_chr3_+_68776884_68776921	0.324301	GGAAGAC	ENSMUST00000054551.3|1110032F04Rik|ENSMUSG00000046999.3|RIKEN cDNA 1110032F04 gene
mm39_v1_chr12_+_4819277_4819337	0.322103	GGAAGAC	ENSMUST00000020967.11|Pfn4|ENSMUSG00000020639.15|profilin family, member 4
mm39_v1_chr19_-_53378990_53379012	0.317307	GGAAGAC	ENSMUST00000025997.7|Smndc1|ENSMUSG00000025024.8|survival motor neuron domain containing 1
mm39_v1_chr3_+_88461059_88461112	0.312734	GGAAGAC	ENSMUST00000008748.8|Ubqln4|ENSMUSG00000008604.12|ubiquilin 4
mm39_v1_chr1_+_127701901_127701975	0.303453	GGAAGAC	ENSMUST00000112570.2|Ccnt2|ENSMUSG00000026349.15|cyclin T2	ENSMUST00000027587.15|Ccnt2|ENSMUSG00000026349.15|cyclin T2
mm39_v1_chr16_-_87229485_87229503	0.300774	GGAAGAC	ENSMUST00000039449.9|Ltn1|ENSMUSG00000052299.10|listerin E3 ubiquitin protein ligase 1
mm39_v1_chr10_-_59787646_59787663	0.292589	GGAAGAC	ENSMUST00000020308.5|Ddit4|ENSMUSG00000020108.5|DNA-damage-inducible transcript 4
mm39_v1_chr14_-_71004019_71004088	0.281773	GGAAGAC	ENSMUST00000167242.8|Xpo7|ENSMUSG00000022100.15|exportin 7
mm39_v1_chr15_-_96597610_96597617	0.281	GGAAGAC	ENSMUST00000023099.8|Slc38a2|ENSMUSG00000022462.8|solute carrier family 38, member 2
mm39_v1_chr3_+_146110387_146110487	0.266598	GGAAGAC	ENSMUST00000106151.8|Ssx2ip|ENSMUSG00000036825.13|synovial sarcoma, X 2 interacting protein	ENSMUST00000106153.9|Ssx2ip|ENSMUSG00000036825.13|synovial sarcoma, X 2 interacting protein	ENSMUST00000039021.11|Ssx2ip|ENSMUSG00000036825.13|synovial sarcoma, X 2 interacting protein	ENSMUST00000106149.8|Ssx2ip|ENSMUSG00000036825.13|synovial sarcoma, X 2 interacting protein	ENSMUST00000149262.8|Ssx2ip|ENSMUSG00000036825.13|synovial sarcoma, X 2 interacting protein
mm39_v1_chr1_-_58625431_58625482	0.262751	GGAAGAC	ENSMUST00000161000.2|Fam126b|ENSMUSG00000038174.15|family with sequence similarity 126, member B	ENSMUST00000161600.8|Fam126b|ENSMUSG00000038174.15|family with sequence similarity 126, member B
mm39_v1_chr7_-_110443557_110443664	0.246364	GGAAGAC	ENSMUST00000177462.8|Rnf141|ENSMUSG00000030788.17|ring finger protein 141	ENSMUST00000176716.3|Rnf141|ENSMUSG00000030788.17|ring finger protein 141	ENSMUST00000176746.8|Rnf141|ENSMUSG00000030788.17|ring finger protein 141	ENSMUST00000177236.8|Rnf141|ENSMUSG00000030788.17|ring finger protein 141
mm39_v1_chr10_+_74896383_74896461	0.208866	GGAAGAC	ENSMUST00000164107.3|Bcr|ENSMUSG00000009681.11|BCR activator of RhoGEF and GTPase
mm39_v1_chr7_-_63588610_63588704	0.208731	GGAAGAC	ENSMUST00000063694.10|Klf13|ENSMUSG00000052040.11|Kruppel-like factor 13
mm39_v1_chr15_+_93296225_93296304	0.203417	GGAAGAC	ENSMUST00000109256.11|Pphln1|ENSMUSG00000036167.17|periphilin 1	ENSMUST00000049122.16|Pphln1|ENSMUSG00000036167.17|periphilin 1	ENSMUST00000068457.15|Pphln1|ENSMUSG00000036167.17|periphilin 1
mm39_v1_chr14_-_40735710_40735774	0.202005	GGAAGAC	ENSMUST00000143143.8|Prxl2a|ENSMUSG00000021792.16|peroxiredoxin like 2A	ENSMUST00000128236.2|Prxl2a|ENSMUSG00000021792.16|peroxiredoxin like 2A	ENSMUST00000022317.15|Prxl2a|ENSMUSG00000021792.16|peroxiredoxin like 2A	ENSMUST00000118466.8|Prxl2a|ENSMUSG00000021792.16|peroxiredoxin like 2A
mm39_v1_chr1_+_75119419_75119443	0.175899	GGAAGAC	ENSMUST00000097694.11|Retreg2|ENSMUSG00000049339.17|reticulophagy regulator family member 2	ENSMUST00000190240.7|Retreg2|ENSMUSG00000049339.17|reticulophagy regulator family member 2
mm39_v1_chr2_+_32340459_32340474	0.175144	GGAAGAC	ENSMUST00000048431.3|Naif1|ENSMUSG00000039164.3|nuclear apoptosis inducing factor 1
mm39_v1_chr10_+_76367427_76367492	0.158358	GGAAGAC	ENSMUST00000048678.7|Lss|ENSMUSG00000033105.13|lanosterol synthase
mm39_v1_chr1_+_176642226_176642226	0.154692	GGAAGAC	ENSMUST00000056773.15|Sdccag8|ENSMUSG00000026504.18|serologically defined colon cancer antigen 8	ENSMUST00000027785.15|Sdccag8|ENSMUSG00000026504.18|serologically defined colon cancer antigen 8
mm39_v1_chr11_+_98754434_98754472	0.135865	GGAAGAC	ENSMUST00000142414.8|Wipf2|ENSMUSG00000038013.15|WAS/WASL interacting protein family, member 2	ENSMUST00000037480.9|Wipf2|ENSMUSG00000038013.15|WAS/WASL interacting protein family, member 2
mm39_v1_chr2_+_131028861_131028891	0.119471	GGAAGAC	ENSMUST00000028804.15|Cdc25b|ENSMUSG00000027330.17|cell division cycle 25B	ENSMUST00000079857.9|Cdc25b|ENSMUSG00000027330.17|cell division cycle 25B
mm39_v1_chr2_-_167334746_167334812	0.114959	GGAAGAC	ENSMUST00000109211.9|Spata2|ENSMUSG00000047030.16|spermatogenesis associated 2	ENSMUST00000057627.16|Spata2|ENSMUSG00000047030.16|spermatogenesis associated 2
mm39_v1_chr9_-_44179758_44179896	0.114298	GGAAGAC	ENSMUST00000034621.16|Nlrx1|ENSMUSG00000032109.16|NLR family member X1	ENSMUST00000168499.9|Nlrx1|ENSMUSG00000032109.16|NLR family member X1
mm39_v1_chr10_+_62756409_62756425	0.109029	GGAAGAC	ENSMUST00000044977.10|Slc25a16|ENSMUSG00000071253.9|solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16
mm39_v1_chr10_-_119075910_119076002	0.103111	GGAAGAC	ENSMUST00000020315.13|Cand1|ENSMUSG00000020114.13|cullin associated and neddylation disassociated 1
mm39_v1_chr16_+_20470402_20470462	0.102707	GGAAGAC	ENSMUST00000007212.9|Psmd2|ENSMUSG00000006998.17|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2	ENSMUST00000232629.2|Psmd2|ENSMUSG00000006998.17|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2
mm39_v1_chr1_-_182169150_182169190	0.101168	GGAAGAC	ENSMUST00000051431.10|Fbxo28|ENSMUSG00000047539.10|F-box protein 28
mm39_v1_chr18_-_38345010_38345106	0.0986491	GGAAGAC	ENSMUST00000159405.3|Pcdh1|ENSMUSG00000051375.16|protocadherin 1	ENSMUST00000160721.8|Pcdh1|ENSMUSG00000051375.16|protocadherin 1
mm39_v1_chr16_-_13977084_13977152	0.0815881	GGAAGAC	ENSMUST00000090300.6|Marf1|ENSMUSG00000060657.9|meiosis regulator and mRNA stability 1
mm39_v1_chr8_+_95328558_95328631	0.0680059	GGAAGAC	ENSMUST00000060389.10|Rspry1|ENSMUSG00000050079.11|ring finger and SPRY domain containing 1	ENSMUST00000212729.2|Rspry1|ENSMUSG00000050079.11|ring finger and SPRY domain containing 1	ENSMUST00000121101.2|Rspry1|ENSMUSG00000050079.11|ring finger and SPRY domain containing 1
mm39_v1_chr9_+_57615816_57615891	0.0553269	GGAAGAC	ENSMUST00000043990.14|Edc3|ENSMUSG00000038957.14|enhancer of mRNA decapping 3	ENSMUST00000142807.2|Edc3|ENSMUSG00000038957.14|enhancer of mRNA decapping 3
mm39_v1_chr14_-_8457069_8457272	0.0523556	GGAAGAC	ENSMUST00000022257.4|Atxn7|ENSMUSG00000021738.6|ataxin 7
mm39_v1_chr6_+_8209216_8209265	0.0457644	GGAAGAC	ENSMUST00000040017.8|Mios|ENSMUSG00000042447.14|meiosis regulator for oocyte development
mm39_v1_chr4_+_137321451_137321585	0.0404292	GGAAGAC	ENSMUST00000105840.8|Usp48|ENSMUSG00000043411.16|ubiquitin specific peptidase 48	ENSMUST00000105839.8|Usp48|ENSMUSG00000043411.16|ubiquitin specific peptidase 48	ENSMUST00000055131.13|Usp48|ENSMUSG00000043411.16|ubiquitin specific peptidase 48	ENSMUST00000105838.8|Usp48|ENSMUSG00000043411.16|ubiquitin specific peptidase 48
mm39_v1_chr5_-_36905983_36906039	0.00827445	GGAAGAC	ENSMUST00000071949.5|Bloc1s4|ENSMUSG00000060708.5|biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino
mm39_v1_chr6_-_115652831_115652925	0.00527211	GGAAGAC	ENSMUST00000112949.8|Raf1|ENSMUSG00000000441.18|v-raf-leukemia viral oncogene 1
