mm39_v1_chr17_+_44499451_44499484	3.57536	GGAGUGU	ENSMUST00000024755.7|Clic5|ENSMUSG00000023959.11|chloride intracellular channel 5
mm39_v1_chr7_+_16515265_16515277	2.39989	GGAGUGU	ENSMUST00000108496.9|Slc1a5|ENSMUSG00000001918.18|solute carrier family 1 (neutral amino acid transporter), member 5
mm39_v1_chrX_+_74425990_74426005	1.95183	GGAGUGU	ENSMUST00000033541.5|Fundc2|ENSMUSG00000031198.5|FUN14 domain containing 2
mm39_v1_chr7_-_126398343_126398426	1.94808	GGAGUGU	ENSMUST00000032934.12|Aldoa|ENSMUSG00000030695.17|aldolase A, fructose-bisphosphate
mm39_v1_chr7_+_45084257_45084295	1.83276	GGAGUGU	ENSMUST00000003964.17|Gys1|ENSMUSG00000003865.17|glycogen synthase 1, muscle
mm39_v1_chr11_-_40646090_40646138	1.68871	GGAGUGU	ENSMUST00000020576.8|Ccng1|ENSMUSG00000020326.8|cyclin G1
mm39_v1_chr1_-_164285914_164285932	1.42228	GGAGUGU	ENSMUST00000027863.13|Atp1b1|ENSMUSG00000026576.13|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm39_v1_chr13_-_97235745_97235745	1.41631	GGAGUGU	ENSMUST00000071118.7|Gm6169|ENSMUSG00000057762.7|predicted gene 6169
mm39_v1_chr14_-_121742659_121742676	1.41618	GGAGUGU	ENSMUST00000088386.8|Slc15a1|ENSMUSG00000025557.11|solute carrier family 15 (oligopeptide transporter), member 1
mm39_v1_chr14_-_106134253_106134253	1.27379	GGAGUGU	ENSMUST00000022709.6|Spry2|ENSMUSG00000022114.6|sprouty RTK signaling antagonist 2
mm39_v1_chr19_-_40576782_40576815	1.04942	GGAGUGU	ENSMUST00000176939.8|Aldh18a1|ENSMUSG00000025007.14|aldehyde dehydrogenase 18 family, member A1
mm39_v1_chr2_-_173118315_173118336	1.02389	GGAGUGU	ENSMUST00000036248.13|Pmepa1|ENSMUSG00000038400.16|prostate transmembrane protein, androgen induced 1
mm39_v1_chr4_+_136013372_136013425	0.888126	GGAGUGU	ENSMUST00000069195.5|Zfp46|ENSMUSG00000051351.15|zinc finger protein 46	ENSMUST00000130658.2|Zfp46|ENSMUSG00000051351.15|zinc finger protein 46
mm39_v1_chr7_-_16657825_16658039	0.851533	GGAGUGU	ENSMUST00000019514.10|Calm3|ENSMUSG00000019370.11|calmodulin 3
mm39_v1_chr1_-_22031718_22031805	0.839344	GGAGUGU	ENSMUST00000029667.13|Kcnq5|ENSMUSG00000028033.17|potassium voltage-gated channel, subfamily Q, member 5	ENSMUST00000173058.8|Kcnq5|ENSMUSG00000028033.17|potassium voltage-gated channel, subfamily Q, member 5	ENSMUST00000173404.2|Kcnq5|ENSMUSG00000028033.17|potassium voltage-gated channel, subfamily Q, member 5
mm39_v1_chr6_-_85046430_85046505	0.82371	GGAGUGU	ENSMUST00000160197.6|Exoc6b|ENSMUSG00000033769.17|exocyst complex component 6B
mm39_v1_chr16_-_31019967_31020064	0.819806	GGAGUGU	ENSMUST00000230614.2|Acap2|ENSMUSG00000049076.13|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2	ENSMUST00000058033.9|Acap2|ENSMUSG00000049076.13|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2
mm39_v1_chr3_+_156267429_156267507	0.807095	GGAGUGU	ENSMUST00000074015.11|Negr1|ENSMUSG00000040037.14|neuronal growth regulator 1
mm39_v1_chr5_-_148336711_148336722	0.80663	GGAGUGU	ENSMUST00000048116.15|Slc7a1|ENSMUSG00000041313.15|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
mm39_v1_chr4_-_141351110_141351151	0.80249	GGAGUGU	ENSMUST00000038661.8|Slc25a34|ENSMUSG00000040740.8|solute carrier family 25, member 34
mm39_v1_chr15_+_76235503_76235537	0.798393	GGAGUGU	ENSMUST00000023212.15|Maf1|ENSMUSG00000022553.17|MAF1 homolog, negative regulator of RNA polymerase III	ENSMUST00000160172.8|Maf1|ENSMUSG00000022553.17|MAF1 homolog, negative regulator of RNA polymerase III
mm39_v1_chr10_+_59159118_59159196	0.797789	GGAGUGU	ENSMUST00000009789.15|P4ha1|ENSMUSG00000019916.15|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide	ENSMUST00000092512.11|P4ha1|ENSMUSG00000019916.15|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide	ENSMUST00000105466.3|P4ha1|ENSMUSG00000019916.15|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide
mm39_v1_chr15_+_37233280_37233318	0.792895	GGAGUGU	ENSMUST00000161405.8|Grhl2|ENSMUSG00000022286.17|grainyhead like transcription factor 2	ENSMUST00000022895.15|Grhl2|ENSMUSG00000022286.17|grainyhead like transcription factor 2	ENSMUST00000161532.2|Grhl2|ENSMUSG00000022286.17|grainyhead like transcription factor 2
mm39_v1_chr10_+_128173603_128173628	0.776535	GGAGUGU	ENSMUST00000005826.9|Cs|ENSMUSG00000005683.9|citrate synthase
mm39_v1_chr7_-_80453033_80453164	0.768916	GGAGUGU	ENSMUST00000167377.3|Iqgap1|ENSMUSG00000030536.11|IQ motif containing GTPase activating protein 1
mm39_v1_chr17_-_17845293_17845329	0.728743	GGAGUGU	ENSMUST00000041047.4|Lnpep|ENSMUSG00000023845.8|leucyl/cystinyl aminopeptidase
mm39_v1_chr1_+_75522902_75522957	0.711465	GGAGUGU	ENSMUST00000124341.8|Slc4a3|ENSMUSG00000006576.17|solute carrier family 4 (anion exchanger), member 3
mm39_v1_chr3_+_108191398_108191458	0.682687	GGAGUGU	ENSMUST00000135636.6|Sort1|ENSMUSG00000068747.15|sortilin 1	ENSMUST00000102632.7|Sort1|ENSMUSG00000068747.15|sortilin 1
mm39_v1_chrX_+_95139639_95139662	0.677735	GGAGUGU	ENSMUST00000117399.2|Msn|ENSMUSG00000031207.17|moesin
mm39_v1_chr9_+_96078340_96078406	0.664763	GGAGUGU	ENSMUST00000034982.16|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000188008.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000188750.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000185644.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2
mm39_v1_chr16_+_10884156_10884247	0.650404	GGAGUGU	ENSMUST00000089011.6|Snn|ENSMUSG00000037972.8|stannin
mm39_v1_chr1_+_131755715_131755757	0.643988	GGAGUGU	ENSMUST00000086559.7|Slc41a1|ENSMUSG00000013275.10|solute carrier family 41, member 1
mm39_v1_chr9_+_54493784_54493796	0.642815	GGAGUGU	ENSMUST00000167866.2|Idh3a|ENSMUSG00000032279.12|isocitrate dehydrogenase 3 (NAD+) alpha
mm39_v1_chr5_-_69749617_69749683	0.63999	GGAGUGU	ENSMUST00000173927.8|Gnpda2|ENSMUSG00000029209.16|glucosamine-6-phosphate deaminase 2	ENSMUST00000120789.8|Gnpda2|ENSMUSG00000029209.16|glucosamine-6-phosphate deaminase 2	ENSMUST00000031117.13|Gnpda2|ENSMUSG00000029209.16|glucosamine-6-phosphate deaminase 2
mm39_v1_chr1_-_174749379_174749393	0.639331	GGAGUGU	ENSMUST00000055294.4|Grem2|ENSMUSG00000050069.4|gremlin 2, DAN family BMP antagonist
mm39_v1_chr9_-_50571080_50571107	0.602344	GGAGUGU	ENSMUST00000034567.4|Dlat|ENSMUSG00000000168.11|dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)
mm39_v1_chr19_+_10366753_10366847	0.590322	GGAGUGU	ENSMUST00000169121.9|Syt7|ENSMUSG00000024743.17|synaptotagmin VII	ENSMUST00000076968.11|Syt7|ENSMUSG00000024743.17|synaptotagmin VII	ENSMUST00000235479.2|Syt7|ENSMUSG00000024743.17|synaptotagmin VII	ENSMUST00000223586.2|Syt7|ENSMUSG00000024743.17|synaptotagmin VII	ENSMUST00000235784.2|Syt7|ENSMUSG00000024743.17|synaptotagmin VII	ENSMUST00000224135.3|Syt7|ENSMUSG00000024743.17|synaptotagmin VII	ENSMUST00000225452.3|Syt7|ENSMUSG00000024743.17|synaptotagmin VII	ENSMUST00000237366.2|Syt7|ENSMUSG00000024743.17|synaptotagmin VII
mm39_v1_chr19_+_11493825_11493876	0.588941	GGAGUGU	ENSMUST00000163078.8|Ms4a6b|ENSMUSG00000024677.14|membrane-spanning 4-domains, subfamily A, member 6B
mm39_v1_chr11_-_98980122_98980144	0.575915	GGAGUGU	ENSMUST00000017751.3|Tns4|ENSMUSG00000017607.10|tensin 4
mm39_v1_chr11_+_77384234_77384397	0.570754	GGAGUGU	ENSMUST00000037285.10|Git1|ENSMUSG00000011877.14|GIT ArfGAP 1	ENSMUST00000100812.4|Git1|ENSMUSG00000011877.14|GIT ArfGAP 1
mm39_v1_chr7_-_16796309_16796352	0.560167	GGAGUGU	ENSMUST00000153833.2|Hif3a|ENSMUSG00000004328.16|hypoxia inducible factor 3, alpha subunit	ENSMUST00000108492.9|Hif3a|ENSMUSG00000004328.16|hypoxia inducible factor 3, alpha subunit
mm39_v1_chr12_-_55867941_55867995	0.549223	GGAGUGU	ENSMUST00000085385.7|Ralgapa1|ENSMUSG00000021027.18|Ral GTPase activating protein, alpha subunit 1	ENSMUST00000110687.8|Ralgapa1|ENSMUSG00000021027.18|Ral GTPase activating protein, alpha subunit 1
mm39_v1_chr8_-_74080101_74080180	0.541568	GGAGUGU	ENSMUST00000119826.7|Large1|ENSMUSG00000004383.19|LARGE xylosyl- and glucuronyltransferase 1	ENSMUST00000212459.2|Large1|ENSMUSG00000004383.19|LARGE xylosyl- and glucuronyltransferase 1
mm39_v1_chr8_+_40760499_40760499	0.536686	GGAGUGU	ENSMUST00000068999.14|Micu3|ENSMUSG00000039478.16|mitochondrial calcium uptake family, member 3
mm39_v1_chrX_+_100892981_100892998	0.536495	GGAGUGU	ENSMUST00000124279.6|Nhsl2|ENSMUSG00000079481.12|NHS-like 2	ENSMUST00000101339.8|Nhsl2|ENSMUSG00000079481.12|NHS-like 2
mm39_v1_chr1_-_135302971_135302983	0.536483	GGAGUGU	ENSMUST00000041240.4|Shisa4|ENSMUSG00000041889.8|shisa family member 4
mm39_v1_chr8_+_12807001_12807028	0.536091	GGAGUGU	ENSMUST00000033818.10|Atp11a|ENSMUSG00000031441.16|ATPase, class VI, type 11A	ENSMUST00000091237.12|Atp11a|ENSMUSG00000031441.16|ATPase, class VI, type 11A
mm39_v1_chr19_-_6947112_6947182	0.497357	GGAGUGU	ENSMUST00000025912.10|Plcb3|ENSMUSG00000024960.10|phospholipase C, beta 3
mm39_v1_chr19_-_47525437_47525558	0.495155	GGAGUGU	ENSMUST00000182808.8|Stn1|ENSMUSG00000042694.18|STN1, CST complex subunit	ENSMUST00000182714.2|Stn1|ENSMUSG00000042694.18|STN1, CST complex subunit	ENSMUST00000049369.16|Stn1|ENSMUSG00000042694.18|STN1, CST complex subunit
mm39_v1_chr2_+_112097087_112097207	0.486556	GGAGUGU	ENSMUST00000110987.9|Slc12a6|ENSMUSG00000027130.16|solute carrier family 12, member 6	ENSMUST00000028549.14|Slc12a6|ENSMUSG00000027130.16|solute carrier family 12, member 6
mm39_v1_chr1_-_74990821_74990837	0.478703	GGAGUGU	ENSMUST00000164097.4|Ihh|ENSMUSG00000006538.13|Indian hedgehog
mm39_v1_chr11_-_87249837_87249901	0.465705	GGAGUGU	ENSMUST00000055438.5|Ppm1e|ENSMUSG00000046442.5|protein phosphatase 1E (PP2C domain containing)
mm39_v1_chr12_-_98225676_98225718	0.462398	GGAGUGU	ENSMUST00000021390.9|Galc|ENSMUSG00000021003.11|galactosylceramidase
mm39_v1_chr11_+_102080446_102080488	0.452794	GGAGUGU	ENSMUST00000070334.10|G6pc3|ENSMUSG00000034793.16|glucose 6 phosphatase, catalytic, 3
mm39_v1_chr8_+_89373943_89374019	0.451825	GGAGUGU	ENSMUST00000118370.8|Nod2|ENSMUSG00000055994.16|nucleotide-binding oligomerization domain containing 2	ENSMUST00000054324.15|Nod2|ENSMUSG00000055994.16|nucleotide-binding oligomerization domain containing 2
mm39_v1_chr4_-_151142351_151142444	0.420374	GGAGUGU	ENSMUST00000030797.4|Vamp3|ENSMUSG00000028955.4|vesicle-associated membrane protein 3
mm39_v1_chr10_+_94350687_94350784	0.405247	GGAGUGU	ENSMUST00000065060.12|Tmcc3|ENSMUSG00000020023.19|transmembrane and coiled coil domains 3
mm39_v1_chr5_+_143450329_143450355	0.402605	GGAGUGU	ENSMUST00000045593.12|Daglb|ENSMUSG00000039206.14|diacylglycerol lipase, beta
mm39_v1_chr1_+_155034452_155034522	0.397173	GGAGUGU	ENSMUST00000027743.13|Stx6|ENSMUSG00000026470.15|syntaxin 6	ENSMUST00000195302.6|Stx6|ENSMUSG00000026470.15|syntaxin 6
mm39_v1_chr2_-_120234539_120234584	0.381304	GGAGUGU	ENSMUST00000090042.12|Tmem87a|ENSMUSG00000033808.17|transmembrane protein 87A	ENSMUST00000110729.2|Tmem87a|ENSMUSG00000033808.17|transmembrane protein 87A	ENSMUST00000090046.12|Tmem87a|ENSMUSG00000033808.17|transmembrane protein 87A
mm39_v1_chr2_-_25498459_25498533	0.372003	GGAGUGU	ENSMUST00000058137.9|Rabl6|ENSMUSG00000015087.15|RAB, member RAS oncogene family-like 6
mm39_v1_chr10_+_69932930_69933066	0.362168	GGAGUGU	ENSMUST00000147545.8|Ccdc6|ENSMUSG00000048701.14|coiled-coil domain containing 6
mm39_v1_chr4_-_133399909_133399964	0.344342	GGAGUGU	ENSMUST00000062118.11|Pigv|ENSMUSG00000043257.16|phosphatidylinositol glycan anchor biosynthesis, class V	ENSMUST00000067902.13|Pigv|ENSMUSG00000043257.16|phosphatidylinositol glycan anchor biosynthesis, class V
mm39_v1_chr8_+_4216556_4216739	0.336506	GGAGUGU	ENSMUST00000239400.2|Evi5l|ENSMUSG00000011832.17|ecotropic viral integration site 5 like	ENSMUST00000177053.8|Evi5l|ENSMUSG00000011832.17|ecotropic viral integration site 5 like	ENSMUST00000176149.9|Evi5l|ENSMUSG00000011832.17|ecotropic viral integration site 5 like	ENSMUST00000176072.9|Evi5l|ENSMUSG00000011832.17|ecotropic viral integration site 5 like	ENSMUST00000176825.3|Evi5l|ENSMUSG00000011832.17|ecotropic viral integration site 5 like
mm39_v1_chr11_+_69871952_69872040	0.3122	GGAGUGU	ENSMUST00000108593.8|Ctdnep1|ENSMUSG00000018559.17|CTD nuclear envelope phosphatase 1
mm39_v1_chr15_+_76423012_76423076	0.305967	GGAGUGU	ENSMUST00000023220.10|Slc52a2|ENSMUSG00000022560.10|solute carrier protein 52, member 2
mm39_v1_chrX_+_165021897_165021909	0.301889	GGAGUGU	ENSMUST00000112235.8|Gpm6b|ENSMUSG00000031342.18|glycoprotein m6b
mm39_v1_chr3_+_88049633_88049790	0.289646	GGAGUGU	ENSMUST00000001455.13|Mef2d|ENSMUSG00000001419.18|myocyte enhancer factor 2D	ENSMUST00000119251.8|Mef2d|ENSMUSG00000001419.18|myocyte enhancer factor 2D
mm39_v1_chr16_+_10306075_10306143	0.271239	GGAGUGU	ENSMUST00000023147.8|Ciita|ENSMUSG00000022504.11|class II transactivator
mm39_v1_chr11_+_50492899_50492923	0.269704	GGAGUGU	ENSMUST00000142118.3|Adamts2|ENSMUSG00000036545.10|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2	ENSMUST00000040523.9|Adamts2|ENSMUSG00000036545.10|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2
mm39_v1_chr4_+_123095297_123095322	0.264849	GGAGUGU	ENSMUST00000068262.6|Nt5c1a|ENSMUSG00000054958.7|5'-nucleotidase, cytosolic IA
mm39_v1_chr4_+_133097013_133097020	0.263574	GGAGUGU	ENSMUST00000030669.8|Slc9a1|ENSMUSG00000028854.10|solute carrier family 9 (sodium/hydrogen exchanger), member 1
mm39_v1_chr1_+_59952131_59952186	0.259841	GGAGUGU	ENSMUST00000036540.12|Fam117b|ENSMUSG00000041040.13|family with sequence similarity 117, member B
mm39_v1_chrX_+_41591355_41591374	0.254959	GGAGUGU	ENSMUST00000189753.7|Sh2d1a|ENSMUSG00000005696.12|SH2 domain containing 1A
mm39_v1_chr10_-_42152684_42152759	0.230465	GGAGUGU	ENSMUST00000175881.8|Foxo3|ENSMUSG00000048756.12|forkhead box O3	ENSMUST00000056974.4|Foxo3|ENSMUSG00000048756.12|forkhead box O3	ENSMUST00000105502.8|Foxo3|ENSMUSG00000048756.12|forkhead box O3	ENSMUST00000105501.2|Foxo3|ENSMUSG00000048756.12|forkhead box O3
mm39_v1_chr6_-_92683136_92683277	0.228647	GGAGUGU	ENSMUST00000032093.12|Prickle2|ENSMUSG00000030020.14|prickle planar cell polarity protein 2
mm39_v1_chr14_-_121616616_121616746	0.214538	GGAGUGU	ENSMUST00000079817.8|Stk24|ENSMUSG00000063410.9|serine/threonine kinase 24
mm39_v1_chr13_+_21901791_21901829	0.20791	GGAGUGU	ENSMUST00000188775.2|H3c10|ENSMUSG00000101355.2|H3 clustered histone 10
mm39_v1_chr15_-_51855073_51855159	0.196564	GGAGUGU	ENSMUST00000022927.11|Rad21|ENSMUSG00000022314.11|RAD21 cohesin complex component
mm39_v1_chr14_+_54701594_54701677	0.185814	GGAGUGU	ENSMUST00000022782.10|Lrp10|ENSMUSG00000022175.10|low-density lipoprotein receptor-related protein 10
mm39_v1_chr4_-_129636073_129636106	0.181794	GGAGUGU	ENSMUST00000066257.6|Khdrbs1|ENSMUSG00000028790.14|KH domain containing, RNA binding, signal transduction associated 1
mm39_v1_chr7_-_25418401_25418513	0.180955	GGAGUGU	ENSMUST00000125699.3|Ccdc97|ENSMUSG00000002608.9|coiled-coil domain containing 97	ENSMUST00000002683.3|Ccdc97|ENSMUSG00000002608.9|coiled-coil domain containing 97
mm39_v1_chr8_-_80784619_80784646	0.176403	GGAGUGU	ENSMUST00000079038.4|Hhip|ENSMUSG00000064325.5|Hedgehog-interacting protein
mm39_v1_chrX_+_98864627_98864627	0.168972	GGAGUGU	ENSMUST00000096363.3|Tmem28|ENSMUSG00000071719.3|transmembrane protein 28
mm39_v1_chr4_-_45408646_45408768	0.167713	GGAGUGU	ENSMUST00000153904.2|Slc25a51|ENSMUSG00000045973.19|solute carrier family 25, member 51	ENSMUST00000132815.3|Slc25a51|ENSMUSG00000045973.19|solute carrier family 25, member 51	ENSMUST00000107796.8|Slc25a51|ENSMUSG00000045973.19|solute carrier family 25, member 51	ENSMUST00000116341.4|Slc25a51|ENSMUSG00000045973.19|solute carrier family 25, member 51
mm39_v1_chrX_+_100342749_100342808	0.166616	GGAGUGU	ENSMUST00000118111.8|Nlgn3|ENSMUSG00000031302.17|neuroligin 3	ENSMUST00000130555.8|Nlgn3|ENSMUSG00000031302.17|neuroligin 3	ENSMUST00000151528.8|Nlgn3|ENSMUSG00000031302.17|neuroligin 3
mm39_v1_chr19_+_11446716_11446746	0.164971	GGAGUGU	ENSMUST00000165310.3|Ms4a6c|ENSMUSG00000079419.5|membrane-spanning 4-domains, subfamily A, member 6C
mm39_v1_chr4_+_99952988_99953064	0.160112	GGAGUGU	ENSMUST00000039630.6|Ror1|ENSMUSG00000035305.6|receptor tyrosine kinase-like orphan receptor 1
mm39_v1_chr16_+_32734464_32734512	0.159052	GGAGUGU	ENSMUST00000023491.13|Lrch3|ENSMUSG00000022801.14|leucine-rich repeats and calponin homology (CH) domain containing 3	ENSMUST00000170899.8|Lrch3|ENSMUSG00000022801.14|leucine-rich repeats and calponin homology (CH) domain containing 3	ENSMUST00000170201.8|Lrch3|ENSMUSG00000022801.14|leucine-rich repeats and calponin homology (CH) domain containing 3	ENSMUST00000165616.8|Lrch3|ENSMUSG00000022801.14|leucine-rich repeats and calponin homology (CH) domain containing 3	ENSMUST00000135193.9|Lrch3|ENSMUSG00000022801.14|leucine-rich repeats and calponin homology (CH) domain containing 3
mm39_v1_chr4_-_135000109_135000130	0.155035	GGAGUGU	ENSMUST00000037099.9|Clic4|ENSMUSG00000037242.9|chloride intracellular channel 4 (mitochondrial)
mm39_v1_chr4_-_41569500_41569551	0.151621	GGAGUGU	ENSMUST00000108049.9|Fam219a|ENSMUSG00000028439.15|family with sequence similarity 219, member A	ENSMUST00000108052.10|Fam219a|ENSMUSG00000028439.15|family with sequence similarity 219, member A	ENSMUST00000108050.2|Fam219a|ENSMUSG00000028439.15|family with sequence similarity 219, member A
mm39_v1_chrX_-_55643429_55643467	0.143696	GGAGUGU	ENSMUST00000059899.3|Mmgt1|ENSMUSG00000061273.4|membrane magnesium transporter 1
mm39_v1_chr3_+_108093645_108093723	0.13831	GGAGUGU	ENSMUST00000050909.7|Amigo1|ENSMUSG00000050947.10|adhesion molecule with Ig like domain 1	ENSMUST00000106659.3|Amigo1|ENSMUSG00000050947.10|adhesion molecule with Ig like domain 1	ENSMUST00000106656.2|Amigo1|ENSMUSG00000050947.10|adhesion molecule with Ig like domain 1
mm39_v1_chr15_-_13173736_13173791	0.127045	GGAGUGU	ENSMUST00000036439.6|Cdh6|ENSMUSG00000039385.6|cadherin 6
mm39_v1_chr7_-_81104423_81104512	0.124514	GGAGUGU	ENSMUST00000178892.3|Cpeb1|ENSMUSG00000025586.18|cytoplasmic polyadenylation element binding protein 1	ENSMUST00000098331.10|Cpeb1|ENSMUSG00000025586.18|cytoplasmic polyadenylation element binding protein 1
mm39_v1_chr11_-_97171294_97171464	0.0947694	GGAGUGU	ENSMUST00000167806.8|Npepps|ENSMUSG00000001441.14|aminopeptidase puromycin sensitive	ENSMUST00000172108.8|Npepps|ENSMUSG00000001441.14|aminopeptidase puromycin sensitive	ENSMUST00000001480.14|Npepps|ENSMUSG00000001441.14|aminopeptidase puromycin sensitive
mm39_v1_chr11_-_61821072_61821083	0.0897933	GGAGUGU	ENSMUST00000102650.10|Akap10|ENSMUSG00000047804.16|A kinase (PRKA) anchor protein 10
mm39_v1_chr2_-_153371861_153371907	0.0893153	GGAGUGU	ENSMUST00000035346.14|Nol4l|ENSMUSG00000061411.13|nucleolar protein 4-like
mm39_v1_chr1_+_55276336_55276414	0.087437	GGAGUGU	ENSMUST00000061334.10|Mars2|ENSMUSG00000046994.10|methionine-tRNA synthetase 2 (mitochondrial)
mm39_v1_chr15_+_78912642_78912656	0.0863959	GGAGUGU	ENSMUST00000180086.3|H1f0|ENSMUSG00000096210.3|H1.0 linker histone
mm39_v1_chr8_-_85549452_85549452	0.086174	GGAGUGU	ENSMUST00000065539.6|Dand5|ENSMUSG00000053226.8|DAN domain family member 5, BMP antagonist
mm39_v1_chr17_-_57242413_57242504	0.08361	GGAGUGU	ENSMUST00000025053.10|Mllt1|ENSMUSG00000024212.10|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 1
mm39_v1_chrX_-_100312629_100312629	0.0789905	GGAGUGU	ENSMUST00000117736.2|Gm20489|ENSMUSG00000092463.2|predicted gene 20489
mm39_v1_chr18_+_77032080_77032145	0.0784999	GGAGUGU	ENSMUST00000026485.15|Hdhd2|ENSMUSG00000025421.16|haloacid dehalogenase-like hydrolase domain containing 2	ENSMUST00000150990.9|Hdhd2|ENSMUSG00000025421.16|haloacid dehalogenase-like hydrolase domain containing 2	ENSMUST00000148955.3|Hdhd2|ENSMUSG00000025421.16|haloacid dehalogenase-like hydrolase domain containing 2
mm39_v1_chr11_-_83320281_83320281	0.0761741	GGAGUGU	ENSMUST00000052521.9|Gas2l2|ENSMUSG00000020686.13|growth arrest-specific 2 like 2
mm39_v1_chr7_+_43112569_43112609	0.0727708	GGAGUGU	ENSMUST00000107977.4|Vsig10l|ENSMUSG00000070604.6|V-set and immunoglobulin domain containing 10 like
mm39_v1_chr7_-_126807581_126807676	0.0679412	GGAGUGU	ENSMUST00000120705.3|Tbc1d10b|ENSMUSG00000042492.13|TBC1 domain family, member 10b
mm39_v1_chr1_-_13062873_13062892	0.0635306	GGAGUGU	ENSMUST00000188454.7|Slco5a1|ENSMUSG00000025938.17|solute carrier organic anion transporter family, member 5A1
mm39_v1_chr8_+_111821262_111821273	0.0444383	GGAGUGU	ENSMUST00000135302.8|Pdpr|ENSMUSG00000033624.11|pyruvate dehydrogenase phosphatase regulatory subunit	ENSMUST00000039333.10|Pdpr|ENSMUSG00000033624.11|pyruvate dehydrogenase phosphatase regulatory subunit
mm39_v1_chr12_-_111344139_111344153	0.0235294	GGAGUGU	ENSMUST00000041965.5|Cdc42bpb|ENSMUSG00000021279.6|CDC42 binding protein kinase beta
