mm39_v1_chr9_+_62765362_62765420	1.80864	GUCAGUU	ENSMUST00000213643.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000034777.14|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000163820.3|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000215870.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000214633.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000215968.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4
mm39_v1_chr17_+_29020064_29020108	1.68827	GUCAGUU	ENSMUST00000004985.11|Brpf3|ENSMUSG00000063952.17|bromodomain and PHD finger containing, 3
mm39_v1_chr18_+_36414122_36414204	1.53655	GUCAGUU	ENSMUST00000051301.6|Pura|ENSMUSG00000043991.6|purine rich element binding protein A
mm39_v1_chr2_-_160208977_160208993	1.25092	GUCAGUU	ENSMUST00000099126.5|Mafb|ENSMUSG00000074622.5|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
mm39_v1_chr19_+_37423198_37423272	1.20896	GUCAGUU	ENSMUST00000025944.9|Hhex|ENSMUSG00000024986.13|hematopoietically expressed homeobox
mm39_v1_chr8_-_116434517_116434533	1.11021	GUCAGUU	ENSMUST00000109104.2|Maf|ENSMUSG00000055435.7|avian musculoaponeurotic fibrosarcoma oncogene homolog
mm39_v1_chr16_+_14523696_14523722	1.07041	GUCAGUU	ENSMUST00000023356.8|Snai2|ENSMUSG00000022676.8|snail family zinc finger 2
mm39_v1_chr11_-_88609048_88609136	0.968313	GUCAGUU	ENSMUST00000107909.8|Msi2|ENSMUSG00000069769.14|musashi RNA-binding protein 2
mm39_v1_chr6_-_141892686_141892691	0.965175	GUCAGUU	ENSMUST00000042119.6|Slco1a1|ENSMUSG00000041698.12|solute carrier organic anion transporter family, member 1a1
mm39_v1_chr12_+_81073573_81073602	0.883706	GUCAGUU	ENSMUST00000110347.9|Smoc1|ENSMUSG00000021136.14|SPARC related  modular calcium binding 1	ENSMUST00000021564.11|Smoc1|ENSMUSG00000021136.14|SPARC related  modular calcium binding 1	ENSMUST00000129362.2|Smoc1|ENSMUSG00000021136.14|SPARC related  modular calcium binding 1
mm39_v1_chr4_+_40143079_40143108	0.878079	GUCAGUU	ENSMUST00000102973.4|Aco1|ENSMUSG00000028405.10|aconitase 1
mm39_v1_chr6_+_137731526_137731598	0.850661	GUCAGUU	ENSMUST00000203216.3|Dera|ENSMUSG00000030225.12|deoxyribose-phosphate aldolase (putative)	ENSMUST00000087675.9|Dera|ENSMUSG00000030225.12|deoxyribose-phosphate aldolase (putative)	ENSMUST00000203693.3|Dera|ENSMUSG00000030225.12|deoxyribose-phosphate aldolase (putative)
mm39_v1_chr17_-_43187280_43187368	0.834515	GUCAGUU	ENSMUST00000024709.9|Cd2ap|ENSMUSG00000061665.8|CD2-associated protein	ENSMUST00000233476.2|Cd2ap|ENSMUSG00000061665.8|CD2-associated protein
mm39_v1_chr3_-_131138541_131138589	0.817626	GUCAGUU	ENSMUST00000090246.5|Sgms2|ENSMUSG00000050931.8|sphingomyelin synthase 2	ENSMUST00000126569.2|Sgms2|ENSMUSG00000050931.8|sphingomyelin synthase 2
mm39_v1_chr2_+_127178072_127178086	0.814266	GUCAGUU	ENSMUST00000028846.7|Dusp2|ENSMUSG00000027368.7|dual specificity phosphatase 2
mm39_v1_chr1_-_165762469_165762605	0.763928	GUCAGUU	ENSMUST00000069609.12|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000111427.9|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000111426.11|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1
mm39_v1_chr10_+_34359395_34359442	0.760063	GUCAGUU	ENSMUST00000019913.15|Frk|ENSMUSG00000019779.16|fyn-related kinase
mm39_v1_chr1_+_16175998_16176095	0.746964	GUCAGUU	ENSMUST00000027053.8|Rdh10|ENSMUSG00000025921.8|retinol dehydrogenase 10 (all-trans)
mm39_v1_chr2_+_68691778_68691854	0.743801	GUCAGUU	ENSMUST00000028426.9|Cers6|ENSMUSG00000027035.11|ceramide synthase 6
mm39_v1_chr19_+_41471067_41471128	0.735698	GUCAGUU	ENSMUST00000067795.13|Lcor|ENSMUSG00000025019.18|ligand dependent nuclear receptor corepressor
mm39_v1_chr5_-_107437427_107437514	0.701996	GUCAGUU	ENSMUST00000031224.15|Tgfbr3|ENSMUSG00000029287.15|transforming growth factor, beta receptor III
mm39_v1_chr13_-_64518112_64518127	0.692652	GUCAGUU	ENSMUST00000021933.8|Ctsl|ENSMUSG00000021477.10|cathepsin L	ENSMUST00000222462.2|Ctsl|ENSMUSG00000021477.10|cathepsin L
mm39_v1_chr15_-_100952206_100952280	0.688374	GUCAGUU	ENSMUST00000178140.2|Fignl2|ENSMUSG00000095440.3|fidgetin-like 2
mm39_v1_chr1_-_165830160_165830182	0.68031	GUCAGUU	ENSMUST00000111429.11|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000176800.2|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000177358.8|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1
mm39_v1_chr3_+_60408600_60408663	0.67296	GUCAGUU	ENSMUST00000099087.8|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1
mm39_v1_chr1_-_192955407_192955525	0.667784	GUCAGUU	ENSMUST00000009777.4|G0s2|ENSMUSG00000009633.4|G0/G1 switch gene 2
mm39_v1_chr17_+_48607405_48607424	0.660738	GUCAGUU	ENSMUST00000170941.3|Treml2|ENSMUSG00000071068.8|triggering receptor expressed on myeloid cells-like 2
mm39_v1_chr4_+_15265798_15265831	0.658537	GUCAGUU	ENSMUST00000062684.9|Tmem64|ENSMUSG00000043252.9|transmembrane protein 64
mm39_v1_chr13_+_47196975_47197067	0.626897	GUCAGUU	ENSMUST00000037025.16|Kdm1b|ENSMUSG00000038080.18|lysine (K)-specific demethylase 1B	ENSMUST00000143868.2|Kdm1b|ENSMUSG00000038080.18|lysine (K)-specific demethylase 1B
mm39_v1_chr3_+_135531409_135531425	0.624197	GUCAGUU	ENSMUST00000180196.8|Slc39a8|ENSMUSG00000053897.16|solute carrier family 39 (metal ion transporter), member 8
mm39_v1_chr7_-_115637970_115637985	0.585175	GUCAGUU	ENSMUST00000166877.8|Sox6|ENSMUSG00000051910.14|SRY (sex determining region Y)-box 6
mm39_v1_chr7_-_116042674_116042698	0.573442	GUCAGUU	ENSMUST00000170430.3|Pik3c2a|ENSMUSG00000030660.10|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha	ENSMUST00000206219.2|Pik3c2a|ENSMUSG00000030660.10|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha
mm39_v1_chr1_-_9770434_9770554	0.569554	GUCAGUU	ENSMUST00000088658.11|Mybl1|ENSMUSG00000025912.17|myeloblastosis oncogene-like 1
mm39_v1_chr9_-_82857528_82857569	0.558957	GUCAGUU	ENSMUST00000034787.12|Phip|ENSMUSG00000032253.14|pleckstrin homology domain interacting protein
mm39_v1_chr6_+_82018604_82018679	0.548758	GUCAGUU	ENSMUST00000042974.15|Eva1a|ENSMUSG00000035104.15|eva-1 homolog A (C. elegans)
mm39_v1_chr11_-_106811507_106811599	0.539611	GUCAGUU	ENSMUST00000103067.10|Smurf2|ENSMUSG00000018363.17|SMAD specific E3 ubiquitin protein ligase 2
mm39_v1_chr5_-_136596299_136596390	0.537001	GUCAGUU	ENSMUST00000004097.16|Cux1|ENSMUSG00000029705.18|cut-like homeobox 1
mm39_v1_chrX_+_135950334_135950415	0.522756	GUCAGUU	ENSMUST00000047852.8|Fam199x|ENSMUSG00000042595.8|family with sequence similarity 199, X-linked
mm39_v1_chr4_-_133480922_133480977	0.512108	GUCAGUU	ENSMUST00000145664.9|Arid1a|ENSMUSG00000007880.17|AT rich interactive domain 1A (SWI-like)	ENSMUST00000105897.10|Arid1a|ENSMUSG00000007880.17|AT rich interactive domain 1A (SWI-like)
mm39_v1_chr7_-_113716996_113717023	0.506374	GUCAGUU	ENSMUST00000069449.7|Rras2|ENSMUSG00000055723.7|related RAS viral (r-ras) oncogene 2
mm39_v1_chr10_-_86541349_86541373	0.493911	GUCAGUU	ENSMUST00000020238.14|Hsp90b1|ENSMUSG00000020048.14|heat shock protein 90, beta (Grp94), member 1
mm39_v1_chr5_+_73071607_73071647	0.486442	GUCAGUU	ENSMUST00000144843.8|Slain2|ENSMUSG00000036087.19|SLAIN motif family, member 2
mm39_v1_chr7_-_132725075_132725107	0.482264	GUCAGUU	ENSMUST00000163601.8|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2	ENSMUST00000124096.8|Fgfr2|ENSMUSG00000030849.19|fibroblast growth factor receptor 2	ENSMUST00000033269.15|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2
mm39_v1_chr3_+_9315662_9315662	0.4768	GUCAGUU	ENSMUST00000155203.2|Zbtb10|ENSMUSG00000069114.9|zinc finger and BTB domain containing 10
mm39_v1_chr3_-_89186940_89186954	0.471041	GUCAGUU	ENSMUST00000118860.2|Efna1|ENSMUSG00000027954.10|ephrin A1	ENSMUST00000029566.9|Efna1|ENSMUSG00000027954.10|ephrin A1
mm39_v1_chr8_+_129412135_129412263	0.469792	GUCAGUU	ENSMUST00000090006.12|Itgb1|ENSMUSG00000025809.16|integrin beta 1 (fibronectin receptor beta)
mm39_v1_chr5_-_25703700_25703841	0.467657	GUCAGUU	ENSMUST00000173073.8|Kmt2c|ENSMUSG00000038056.16|lysine (K)-specific methyltransferase 2C	ENSMUST00000045291.14|Kmt2c|ENSMUSG00000038056.16|lysine (K)-specific methyltransferase 2C	ENSMUST00000173174.2|Kmt2c|ENSMUSG00000038056.16|lysine (K)-specific methyltransferase 2C
mm39_v1_chr18_-_14815807_14815971	0.454021	GUCAGUU	ENSMUST00000040964.13|Ss18|ENSMUSG00000037013.18|SS18, nBAF chromatin remodeling complex subunit	ENSMUST00000234524.2|Ss18|ENSMUSG00000037013.18|SS18, nBAF chromatin remodeling complex subunit	ENSMUST00000092041.11|Ss18|ENSMUSG00000037013.18|SS18, nBAF chromatin remodeling complex subunit	ENSMUST00000040924.9|Ss18|ENSMUSG00000037013.18|SS18, nBAF chromatin remodeling complex subunit
mm39_v1_chr16_+_43960183_43960263	0.449204	GUCAGUU	ENSMUST00000159514.8|Naa50|ENSMUSG00000022698.18|N(alpha)-acetyltransferase 50, NatE catalytic subunit	ENSMUST00000161326.8|Naa50|ENSMUSG00000022698.18|N(alpha)-acetyltransferase 50, NatE catalytic subunit	ENSMUST00000063520.15|Naa50|ENSMUSG00000022698.18|N(alpha)-acetyltransferase 50, NatE catalytic subunit	ENSMUST00000063542.8|Naa50|ENSMUSG00000022698.18|N(alpha)-acetyltransferase 50, NatE catalytic subunit
mm39_v1_chr11_+_55360502_55360543	0.440565	GUCAGUU	ENSMUST00000018727.4|G3bp1|ENSMUSG00000018583.6|GTPase activating protein (SH3 domain) binding protein 1
mm39_v1_chr2_-_153083322_153083346	0.421705	GUCAGUU	ENSMUST00000056924.14|Plagl2|ENSMUSG00000051413.18|pleiomorphic adenoma gene-like 2
mm39_v1_chr8_-_112603292_112603382	0.413684	GUCAGUU	ENSMUST00000034431.3|Tmem170|ENSMUSG00000031953.3|transmembrane protein 170
mm39_v1_chr6_-_38853097_38853167	0.403209	GUCAGUU	ENSMUST00000161779.8|Hipk2|ENSMUSG00000061436.16|homeodomain interacting protein kinase 2
mm39_v1_chr8_+_45388466_45388484	0.40219	GUCAGUU	ENSMUST00000191428.7|Fat1|ENSMUSG00000070047.15|FAT atypical cadherin 1
mm39_v1_chr2_+_4405769_4405786	0.383789	GUCAGUU	ENSMUST00000075767.14|Frmd4a|ENSMUSG00000026657.18|FERM domain containing 4A
mm39_v1_chr2_-_125701059_125701141	0.380703	GUCAGUU	ENSMUST00000110463.8|Cops2|ENSMUSG00000027206.14|COP9 signalosome subunit 2	ENSMUST00000028635.6|Cops2|ENSMUSG00000027206.14|COP9 signalosome subunit 2
mm39_v1_chr2_-_72810782_72810811	0.376931	GUCAGUU	ENSMUST00000102689.10|Sp3|ENSMUSG00000027109.17|trans-acting transcription factor 3
mm39_v1_chr8_+_108020092_108020118	0.376912	GUCAGUU	ENSMUST00000169453.8|Nfat5|ENSMUSG00000003847.17|nuclear factor of activated T cells 5
mm39_v1_chr9_-_85209162_85209183	0.375637	GUCAGUU	ENSMUST00000034802.15|Tent5a|ENSMUSG00000032265.15|terminal nucleotidyltransferase 5A
mm39_v1_chr19_+_46587523_46587617	0.374285	GUCAGUU	ENSMUST00000138302.9|Wbp1l|ENSMUSG00000047731.18|WW domain binding protein 1 like	ENSMUST00000099376.11|Wbp1l|ENSMUSG00000047731.18|WW domain binding protein 1 like
mm39_v1_chr4_+_40722911_40723001	0.369783	GUCAGUU	ENSMUST00000164233.8|Dnaja1|ENSMUSG00000028410.14|DnaJ heat shock protein family (Hsp40) member A1	ENSMUST00000137246.8|Dnaja1|ENSMUSG00000028410.14|DnaJ heat shock protein family (Hsp40) member A1	ENSMUST00000125442.8|Dnaja1|ENSMUSG00000028410.14|DnaJ heat shock protein family (Hsp40) member A1
mm39_v1_chr17_-_35178208_35178214	0.35971	GUCAGUU	ENSMUST00000172753.2|Hspa1b|ENSMUSG00000090877.4|heat shock protein 1B
mm39_v1_chr4_-_132149780_132149808	0.338161	GUCAGUU	ENSMUST00000102568.10|Phactr4|ENSMUSG00000066043.14|phosphatase and actin regulator 4
mm39_v1_chr7_-_29979758_29979851	0.321151	GUCAGUU	ENSMUST00000108190.8|Wdr62|ENSMUSG00000037020.17|WD repeat domain 62
mm39_v1_chr5_+_89034666_89034684	0.318178	GUCAGUU	ENSMUST00000148750.8|Slc4a4|ENSMUSG00000060961.17|solute carrier family 4 (anion exchanger), member 4
mm39_v1_chr8_+_23349543_23349570	0.314764	GUCAGUU	ENSMUST00000238975.2|Kat6a|ENSMUSG00000031540.15|K(lysine) acetyltransferase 6A	ENSMUST00000110696.8|Kat6a|ENSMUSG00000031540.15|K(lysine) acetyltransferase 6A	ENSMUST00000044331.7|Kat6a|ENSMUSG00000031540.15|K(lysine) acetyltransferase 6A
mm39_v1_chr13_-_85437118_85437178	0.314128	GUCAGUU	ENSMUST00000109552.3|Rasa1|ENSMUSG00000021549.15|RAS p21 protein activator 1
mm39_v1_chr17_+_3165232_3165257	0.301213	GUCAGUU	ENSMUST00000076734.8|Scaf8|ENSMUSG00000046201.10|SR-related CTD-associated factor 8
mm39_v1_chr3_-_92050043_92050073	0.296098	GUCAGUU	ENSMUST00000197811.2|4930511M18Rik|ENSMUSG00000104791.2|RIKEN cDNA 4930511M18 gene	ENSMUST00000029535.6|Lelp1|ENSMUSG00000027927.6|late cornified envelope-like proline-rich 1
mm39_v1_chr8_+_80366247_80366333	0.28977	GUCAGUU	ENSMUST00000173078.8|Otud4|ENSMUSG00000036990.14|OTU domain containing 4	ENSMUST00000173286.8|Otud4|ENSMUSG00000036990.14|OTU domain containing 4
mm39_v1_chr13_-_103911092_103911139	0.288861	GUCAGUU	ENSMUST00000074616.7|Srek1|ENSMUSG00000032621.9|splicing regulatory glutamine/lysine-rich protein 1
mm39_v1_chr15_+_80595486_80595541	0.285089	GUCAGUU	ENSMUST00000067689.9|Tnrc6b|ENSMUSG00000047888.11|trinucleotide repeat containing 6b
mm39_v1_chr19_+_25649767_25649789	0.282292	GUCAGUU	ENSMUST00000053068.7|Dmrt2|ENSMUSG00000048138.11|doublesex and mab-3 related transcription factor 2
mm39_v1_chrX_-_93166992_93167018	0.281097	GUCAGUU	ENSMUST00000088102.12|Zfx|ENSMUSG00000079509.11|zinc finger protein X-linked	ENSMUST00000113927.8|Zfx|ENSMUSG00000079509.11|zinc finger protein X-linked
mm39_v1_chr2_+_119727689_119727786	0.280517	GUCAGUU	ENSMUST00000046717.13|Mga|ENSMUSG00000033943.16|MAX gene associated	ENSMUST00000079934.12|Mga|ENSMUSG00000033943.16|MAX gene associated	ENSMUST00000110774.8|Mga|ENSMUSG00000033943.16|MAX gene associated	ENSMUST00000110773.9|Mga|ENSMUSG00000033943.16|MAX gene associated	ENSMUST00000156510.2|Mga|ENSMUSG00000033943.16|MAX gene associated
mm39_v1_chr15_-_57755753_57755879	0.279364	GUCAGUU	ENSMUST00000022993.7|Derl1|ENSMUSG00000022365.7|Der1-like domain family, member 1
mm39_v1_chr10_-_116417333_116417416	0.276095	GUCAGUU	ENSMUST00000218744.2|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000105267.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000105265.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000167706.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000168036.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000169921.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000020374.6|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2
mm39_v1_chr6_+_126992549_126992549	0.274953	GUCAGUU	ENSMUST00000000187.7|Fgf6|ENSMUSG00000000183.7|fibroblast growth factor 6
mm39_v1_chr1_-_87936242_87936278	0.271181	GUCAGUU	ENSMUST00000187758.7|Usp40|ENSMUSG00000005501.15|ubiquitin specific peptidase 40	ENSMUST00000040783.11|Usp40|ENSMUSG00000005501.15|ubiquitin specific peptidase 40
mm39_v1_chr14_+_75253453_75253514	0.266052	GUCAGUU	ENSMUST00000036072.8|Rubcnl|ENSMUSG00000034959.9|RUN and cysteine rich domain containing beclin 1 interacting protein like
mm39_v1_chr11_+_4207557_4207592	0.264193	GUCAGUU	ENSMUST00000066283.12|Lif|ENSMUSG00000034394.15|leukemia inhibitory factor
mm39_v1_chr12_+_98713194_98713305	0.263987	GUCAGUU	ENSMUST00000110104.10|Zc3h14|ENSMUSG00000021012.17|zinc finger CCCH type containing 14	ENSMUST00000057000.17|Zc3h14|ENSMUSG00000021012.17|zinc finger CCCH type containing 14	ENSMUST00000110105.10|Zc3h14|ENSMUSG00000021012.17|zinc finger CCCH type containing 14	ENSMUST00000223083.2|Zc3h14|ENSMUSG00000021012.17|zinc finger CCCH type containing 14
mm39_v1_chr9_-_66826928_66826992	0.256159	GUCAGUU	ENSMUST00000041139.9|Rab8b|ENSMUSG00000036943.10|RAB8B, member RAS oncogene family
mm39_v1_chr3_-_84489783_84489841	0.252007	GUCAGUU	ENSMUST00000107687.9|Arfip1|ENSMUSG00000074513.10|ADP-ribosylation factor interacting protein 1	ENSMUST00000098990.10|Arfip1|ENSMUSG00000074513.10|ADP-ribosylation factor interacting protein 1
mm39_v1_chr1_-_181039509_181039580	0.249199	GUCAGUU	ENSMUST00000162819.9|Wdr26|ENSMUSG00000038733.15|WD repeat domain 26	ENSMUST00000237749.2|Wdr26|ENSMUSG00000038733.15|WD repeat domain 26
mm39_v1_chr6_-_149003171_149003184	0.246163	GUCAGUU	ENSMUST00000111557.8|Dennd5b|ENSMUSG00000030313.16|DENN/MADD domain containing 5B
mm39_v1_chr10_+_97315465_97315479	0.239585	GUCAGUU	ENSMUST00000105287.11|Dcn|ENSMUSG00000019929.17|decorin
mm39_v1_chr14_+_60872167_60872226	0.23958	GUCAGUU	ENSMUST00000022566.14|Spata13|ENSMUSG00000021990.17|spermatogenesis associated 13	ENSMUST00000159729.2|Spata13|ENSMUSG00000021990.17|spermatogenesis associated 13
mm39_v1_chr4_+_97665843_97665870	0.236379	GUCAGUU	ENSMUST00000075448.13|Nfia|ENSMUSG00000028565.19|nuclear factor I/A	ENSMUST00000092532.13|Nfia|ENSMUSG00000028565.19|nuclear factor I/A
mm39_v1_chr10_-_25412010_25412165	0.222167	GUCAGUU	ENSMUST00000179685.3|Smlr1|ENSMUSG00000096546.3|small leucine-rich protein 1
mm39_v1_chr15_-_103148239_103148297	0.218674	GUCAGUU	ENSMUST00000118152.8|Cbx5|ENSMUSG00000009575.15|chromobox 5
mm39_v1_chr9_+_65816206_65816302	0.217157	GUCAGUU	ENSMUST00000205379.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000206048.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000034949.10|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000154589.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1
mm39_v1_chr4_-_14621805_14621819	0.215008	GUCAGUU	ENSMUST00000042221.14|Slc26a7|ENSMUSG00000040569.14|solute carrier family 26, member 7
mm39_v1_chr3_-_57483175_57483257	0.214166	GUCAGUU	ENSMUST00000029380.14|Wwtr1|ENSMUSG00000027803.15|WW domain containing transcription regulator 1
mm39_v1_chr2_+_6327431_6327478	0.211066	GUCAGUU	ENSMUST00000114937.8|Usp6nl|ENSMUSG00000039046.16|USP6 N-terminal like
mm39_v1_chr14_+_26300693_26300767	0.208998	GUCAGUU	ENSMUST00000203874.3|Dennd6a|ENSMUSG00000040818.11|DENN/MADD domain containing 6A	ENSMUST00000037585.9|Dennd6a|ENSMUSG00000040818.11|DENN/MADD domain containing 6A
mm39_v1_chr8_-_87472562_87472682	0.204873	GUCAGUU	ENSMUST00000045296.6|Siah1a|ENSMUSG00000036840.6|siah E3 ubiquitin protein ligase 1A
mm39_v1_chr18_+_74575567_74575608	0.202014	GUCAGUU	ENSMUST00000074157.13|Myo5b|ENSMUSG00000025885.19|myosin VB
mm39_v1_chr13_-_46118433_46118477	0.200699	GUCAGUU	ENSMUST00000167708.4|Atxn1|ENSMUSG00000046876.17|ataxin 1	ENSMUST00000091628.11|Atxn1|ENSMUSG00000046876.17|ataxin 1	ENSMUST00000180110.9|Atxn1|ENSMUSG00000046876.17|ataxin 1
mm39_v1_chr8_+_57004125_57004197	0.19888	GUCAGUU	ENSMUST00000110322.9|Fbxo8|ENSMUSG00000038206.14|F-box protein 8	ENSMUST00000040218.13|Fbxo8|ENSMUSG00000038206.14|F-box protein 8	ENSMUST00000210863.2|Fbxo8|ENSMUSG00000038206.14|F-box protein 8
mm39_v1_chr1_+_160733942_160734030	0.185512	GUCAGUU	ENSMUST00000161609.8|Rc3h1|ENSMUSG00000040423.12|RING CCCH (C3H) domains 1
mm39_v1_chr9_+_74944896_74944983	0.181072	GUCAGUU	ENSMUST00000168166.8|Arpp19|ENSMUSG00000007656.14|cAMP-regulated phosphoprotein 19	ENSMUST00000169492.8|Arpp19|ENSMUSG00000007656.14|cAMP-regulated phosphoprotein 19	ENSMUST00000170308.8|Arpp19|ENSMUSG00000007656.14|cAMP-regulated phosphoprotein 19
mm39_v1_chr3_-_154760978_154761044	0.160032	GUCAGUU	ENSMUST00000064076.6|Tnni3k|ENSMUSG00000040086.14|TNNI3 interacting kinase
mm39_v1_chr11_-_86435579_86435631	0.150493	GUCAGUU	ENSMUST00000138810.3|Rps6kb1|ENSMUSG00000020516.16|ribosomal protein S6 kinase, polypeptide 1	ENSMUST00000058286.9|Rps6kb1|ENSMUSG00000020516.16|ribosomal protein S6 kinase, polypeptide 1	ENSMUST00000154617.8|Rps6kb1|ENSMUSG00000020516.16|ribosomal protein S6 kinase, polypeptide 1
mm39_v1_chr8_+_109441276_109441276	0.139511	GUCAGUU	ENSMUST00000043896.10|Zfhx3|ENSMUSG00000038872.11|zinc finger homeobox 3
mm39_v1_chr6_-_99243455_99243501	0.134951	GUCAGUU	ENSMUST00000113326.9|Foxp1|ENSMUSG00000030067.18|forkhead box P1
mm39_v1_chr10_-_14420725_14420780	0.132769	GUCAGUU	ENSMUST00000041168.6|Adgrg6|ENSMUSG00000039116.8|adhesion G protein-coupled receptor G6	ENSMUST00000238680.2|Adgrg6|ENSMUSG00000039116.8|adhesion G protein-coupled receptor G6
mm39_v1_chr15_-_82128888_82128956	0.129194	GUCAGUU	ENSMUST00000089155.6|Cenpm|ENSMUSG00000068101.12|centromere protein M	ENSMUST00000089157.11|Cenpm|ENSMUSG00000068101.12|centromere protein M
mm39_v1_chr8_+_105897300_105897446	0.123754	GUCAGUU	ENSMUST00000052209.9|Cbfb|ENSMUSG00000031885.15|core binding factor beta	ENSMUST00000109392.9|Cbfb|ENSMUSG00000031885.15|core binding factor beta	ENSMUST00000109395.8|Cbfb|ENSMUSG00000031885.15|core binding factor beta
mm39_v1_chr7_-_136916123_136916174	0.123698	GUCAGUU	ENSMUST00000106118.10|Ebf3|ENSMUSG00000010476.15|early B cell factor 3	ENSMUST00000168203.2|Ebf3|ENSMUSG00000010476.15|early B cell factor 3	ENSMUST00000169486.9|Ebf3|ENSMUSG00000010476.15|early B cell factor 3	ENSMUST00000033378.13|Ebf3|ENSMUSG00000010476.15|early B cell factor 3
mm39_v1_chr2_+_173501553_173501664	0.123363	GUCAGUU	ENSMUST00000029024.10|Rab22a|ENSMUSG00000027519.11|RAB22A, member RAS oncogene family	ENSMUST00000109110.4|Rab22a|ENSMUSG00000027519.11|RAB22A, member RAS oncogene family
mm39_v1_chr2_+_58991352_58991398	0.121285	GUCAGUU	ENSMUST00000037903.15|Pkp4|ENSMUSG00000026991.21|plakophilin 4
mm39_v1_chr1_+_136059101_136059142	0.115183	GUCAGUU	ENSMUST00000075164.11|Kif21b|ENSMUSG00000041642.19|kinesin family member 21B
mm39_v1_chrX_+_105070907_105070929	0.114177	GUCAGUU	ENSMUST00000055941.7|Atp7a|ENSMUSG00000033792.13|ATPase, Cu++ transporting, alpha polypeptide
mm39_v1_chr7_-_128342158_128342238	0.113161	GUCAGUU	ENSMUST00000119081.2|Mcmbp|ENSMUSG00000048170.15|minichromosome maintenance complex binding protein	ENSMUST00000057557.14|Mcmbp|ENSMUSG00000048170.15|minichromosome maintenance complex binding protein
mm39_v1_chr3_-_142587678_142587787	0.107575	GUCAGUU	ENSMUST00000043812.15|Pkn2|ENSMUSG00000004591.17|protein kinase N2
mm39_v1_chr18_+_5591864_5591902	0.104273	GUCAGUU	ENSMUST00000025081.13|Zeb1|ENSMUSG00000024238.16|zinc finger E-box binding homeobox 1	ENSMUST00000159390.8|Zeb1|ENSMUSG00000024238.16|zinc finger E-box binding homeobox 1
mm39_v1_chr13_+_23947641_23947657	0.0966176	GUCAGUU	ENSMUST00000055770.4|H1f1|ENSMUSG00000049539.4|H1.1 linker histone, cluster member
mm39_v1_chr11_+_44409775_44409827	0.0934225	GUCAGUU	ENSMUST00000019333.10|Rnf145|ENSMUSG00000019189.14|ring finger protein 145
mm39_v1_chr12_+_65083093_65083132	0.0920088	GUCAGUU	ENSMUST00000120580.8|Prpf39|ENSMUSG00000035597.20|pre-mRNA processing factor 39
mm39_v1_chr1_+_38037086_38037096	0.0895068	GUCAGUU	ENSMUST00000027252.8|Eif5b|ENSMUSG00000026083.13|eukaryotic translation initiation factor 5B
mm39_v1_chr3_-_122413361_122413372	0.0887443	GUCAGUU	ENSMUST00000239148.2|Fnbp1l|ENSMUSG00000039735.17|formin binding protein 1-like	ENSMUST00000162409.8|Fnbp1l|ENSMUSG00000039735.17|formin binding protein 1-like	ENSMUST00000162947.3|Fnbp1l|ENSMUSG00000039735.17|formin binding protein 1-like
mm39_v1_chr11_+_94218810_94218858	0.0869642	GUCAGUU	ENSMUST00000107818.9|Ankrd40|ENSMUSG00000020864.14|ankyrin repeat domain 40	ENSMUST00000051221.13|Ankrd40|ENSMUSG00000020864.14|ankyrin repeat domain 40
mm39_v1_chr4_-_82423985_82424044	0.0844368	GUCAGUU	ENSMUST00000107245.9|Nfib|ENSMUSG00000008575.18|nuclear factor I/B	ENSMUST00000107246.2|Nfib|ENSMUSG00000008575.18|nuclear factor I/B
mm39_v1_chr11_+_109253598_109253695	0.0835882	GUCAGUU	ENSMUST00000106702.4|Gna13|ENSMUSG00000020611.15|guanine nucleotide binding protein, alpha 13	ENSMUST00000020930.14|Gna13|ENSMUSG00000020611.15|guanine nucleotide binding protein, alpha 13
mm39_v1_chr10_-_42152684_42152759	0.0833621	GUCAGUU	ENSMUST00000175881.8|Foxo3|ENSMUSG00000048756.12|forkhead box O3	ENSMUST00000056974.4|Foxo3|ENSMUSG00000048756.12|forkhead box O3	ENSMUST00000105502.8|Foxo3|ENSMUSG00000048756.12|forkhead box O3	ENSMUST00000105501.2|Foxo3|ENSMUSG00000048756.12|forkhead box O3
mm39_v1_chr2_+_103788321_103788391	0.0825942	GUCAGUU	ENSMUST00000156813.8|Lmo2|ENSMUSG00000032698.16|LIM domain only 2	ENSMUST00000170926.8|Lmo2|ENSMUSG00000032698.16|LIM domain only 2
mm39_v1_chr11_+_68979332_68979380	0.0750413	GUCAGUU	ENSMUST00000117780.2|Vamp2|ENSMUSG00000020894.17|vesicle-associated membrane protein 2
mm39_v1_chr13_+_35843816_35843853	0.0724046	GUCAGUU	ENSMUST00000075220.14|Cdyl|ENSMUSG00000059288.15|chromodomain protein, Y chromosome-like
mm39_v1_chr10_-_122912272_122912410	0.0508357	GUCAGUU	ENSMUST00000219203.2|Mon2|ENSMUSG00000034602.16|MON2 homolog, regulator of endosome to Golgi trafficking	ENSMUST00000073792.11|Mon2|ENSMUSG00000034602.16|MON2 homolog, regulator of endosome to Golgi trafficking
mm39_v1_chr5_-_90514360_90514469	0.047572	GUCAGUU	ENSMUST00000168058.7|Ankrd17|ENSMUSG00000055204.16|ankyrin repeat domain 17	ENSMUST00000014421.15|Ankrd17|ENSMUSG00000055204.16|ankyrin repeat domain 17
mm39_v1_chr5_+_150597204_150597269	0.0462944	GUCAGUU	ENSMUST00000202170.4|Pds5b|ENSMUSG00000034021.16|PDS5 cohesin associated factor B	ENSMUST00000016569.11|Pds5b|ENSMUSG00000034021.16|PDS5 cohesin associated factor B
mm39_v1_chr19_+_5416769_5416881	0.0402621	GUCAGUU	ENSMUST00000025759.9|Eif1ad|ENSMUSG00000024841.9|eukaryotic translation initiation factor 1A domain containing
mm39_v1_chr2_-_105734829_105734909	0.0390171	GUCAGUU	ENSMUST00000122965.8|Elp4|ENSMUSG00000027167.12|elongator acetyltransferase complex subunit 4
mm39_v1_chr2_+_90770742_90770888	0.0326589	GUCAGUU	ENSMUST00000005643.14|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000111451.10|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000177642.8|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000068726.13|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000068747.14|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1
mm39_v1_chr4_+_15881256_15881272	0.031851	GUCAGUU	ENSMUST00000029876.2|Calb1|ENSMUSG00000028222.3|calbindin 1
mm39_v1_chr6_-_14755249_14755285	0.0297181	GUCAGUU	ENSMUST00000045096.6|Ppp1r3a|ENSMUSG00000042717.6|protein phosphatase 1, regulatory subunit 3A
mm39_v1_chr4_-_126323291_126323349	0.0295208	GUCAGUU	ENSMUST00000069097.13|Ago3|ENSMUSG00000028842.16|argonaute RISC catalytic subunit 3
mm39_v1_chr8_+_10027707_10027725	0.025589	GUCAGUU	ENSMUST00000139793.8|Abhd13|ENSMUSG00000040396.13|abhydrolase domain containing 13	ENSMUST00000048216.6|Abhd13|ENSMUSG00000040396.13|abhydrolase domain containing 13
mm39_v1_chr1_-_156767123_156767186	0.0230404	GUCAGUU	ENSMUST00000189316.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000190648.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000172057.8|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000191605.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2
mm39_v1_chr2_-_48839276_48839288	0.0175924	GUCAGUU	ENSMUST00000028098.11|Orc4|ENSMUSG00000026761.13|origin recognition complex, subunit 4
mm39_v1_chr7_+_67602565_67602576	0.0144038	GUCAGUU	ENSMUST00000005671.10|Igf1r|ENSMUSG00000005533.11|insulin-like growth factor I receptor
mm39_v1_chr5_-_34093678_34093757	0.0128439	GUCAGUU	ENSMUST00000030993.8|Nelfa|ENSMUSG00000029111.8|negative elongation factor complex member A, Whsc2
mm39_v1_chr5_-_86893645_86893674	0.0103456	GUCAGUU	ENSMUST00000161306.2|Tmprss11e|ENSMUSG00000054537.9|transmembrane protease, serine 11e
mm39_v1_chr6_-_83418656_83418666	0.00481139	GUCAGUU	ENSMUST00000089622.11|Tet3|ENSMUSG00000034832.16|tet methylcytosine dioxygenase 3
mm39_v1_chr4_+_124635635_124635677	0.00336416	GUCAGUU	ENSMUST00000094782.10|Inpp5b|ENSMUSG00000028894.19|inositol polyphosphate-5-phosphatase B	ENSMUST00000153837.8|Inpp5b|ENSMUSG00000028894.19|inositol polyphosphate-5-phosphatase B	ENSMUST00000154229.2|Inpp5b|ENSMUSG00000028894.19|inositol polyphosphate-5-phosphatase B
mm39_v1_chr17_+_27192135_27192193	0.00300126	GUCAGUU	ENSMUST00000120016.3|Zbtb9|ENSMUSG00000079605.6|zinc finger and BTB domain containing 9
mm39_v1_chr8_+_85696216_85696282	0.00259207	GUCAGUU	ENSMUST00000109734.8|Prdx2|ENSMUSG00000005161.16|peroxiredoxin 2	ENSMUST00000005292.15|Prdx2|ENSMUSG00000005161.16|peroxiredoxin 2
mm39_v1_chr7_+_36397426_36397543	0.00192274	GUCAGUU	ENSMUST00000021641.8|Tshz3|ENSMUSG00000021217.8|teashirt zinc finger family member 3
