mm39_v1_chr7_+_28240262_28240340	6.57865	Gli2	ENSMUST00000119180.4|Sycn|ENSMUSG00000084174.4|syncollin
mm39_v1_chr16_+_4825216_4825241	5.62808	Gli2	ENSMUST00000185147.8|Smim22|ENSMUSG00000096215.9|small integral membrane protein 22
mm39_v1_chr11_+_115802828_115802850	4.33369	Gli2	ENSMUST00000132961.2|Smim6|ENSMUSG00000075420.7|small integral membrane protein 6
mm39_v1_chr5_-_53370761_53370826	3.81719	Gli2	ENSMUST00000031090.8|Sel1l3|ENSMUSG00000029189.11|sel-1 suppressor of lin-12-like 3 (C. elegans)
mm39_v1_chr7_-_144292288_144292346	3.35459	Gli2	ENSMUST00000238848.2|Ano1|ENSMUSG00000031075.20|anoctamin 1, calcium activated chloride channel	ENSMUST00000118556.9|Ano1|ENSMUSG00000031075.20|anoctamin 1, calcium activated chloride channel	ENSMUST00000033393.15|Ano1|ENSMUSG00000031075.20|anoctamin 1, calcium activated chloride channel
mm39_v1_chr18_+_35347983_35348189	2.88225	Gli2	ENSMUST00000235449.2|Ctnna1|ENSMUSG00000037815.8|catenin (cadherin associated protein), alpha 1	ENSMUST00000235269.2|Ctnna1|ENSMUSG00000037815.8|catenin (cadherin associated protein), alpha 1
mm39_v1_chr11_+_96820220_96820247	2.70666	Gli2	ENSMUST00000062172.6|Prr15l|ENSMUSG00000047040.10|proline rich 15-like
mm39_v1_chr11_+_96820091_96820175	2.65496	Gli2	ENSMUST00000054311.6|Prr15l|ENSMUSG00000047040.10|proline rich 15-like	ENSMUST00000107636.4|Prr15l|ENSMUSG00000047040.10|proline rich 15-like
mm39_v1_chr7_-_144292257_144292286	2.61948	Gli2	ENSMUST00000121758.8|Ano1|ENSMUSG00000031075.20|anoctamin 1, calcium activated chloride channel
mm39_v1_chr5_+_117457126_117457185	2.58929	Gli2	ENSMUST00000111967.8|Vsig10|ENSMUSG00000066894.15|V-set and immunoglobulin domain containing 10
mm39_v1_chr6_+_113448388_113448436	2.44042	Gli2	ENSMUST00000058300.14|Il17rc|ENSMUSG00000030281.17|interleukin 17 receptor C
mm39_v1_chr5_+_117457356_117457393	2.39875	Gli2	ENSMUST00000086464.8|Vsig10|ENSMUSG00000066894.15|V-set and immunoglobulin domain containing 10
mm39_v1_chr5_+_144127102_144127152	2.26531	Gli2	ENSMUST00000060747.8|Bhlha15|ENSMUSG00000052271.8|basic helix-loop-helix family, member a15
mm39_v1_chr5_+_73563418_73563611	2.15793	Gli2	ENSMUST00000031040.13|Cwh43|ENSMUSG00000029154.14|cell wall biogenesis 43 C-terminal homolog	ENSMUST00000065543.8|Cwh43|ENSMUSG00000029154.14|cell wall biogenesis 43 C-terminal homolog
mm39_v1_chr11_-_103235475_103235545	2.13648	Gli2	ENSMUST00000041385.14|Arhgap27|ENSMUSG00000034255.18|Rho GTPase activating protein 27
mm39_v1_chr9_+_44966464_44966494	2.04757	Gli2	ENSMUST00000114664.8|Mpzl3|ENSMUSG00000070305.11|myelin protein zero-like 3
mm39_v1_chr8_-_27664651_27664680	1.98177	Gli2	ENSMUST00000054212.7|Rab11fip1|ENSMUSG00000031488.15|RAB11 family interacting protein 1 (class I)	ENSMUST00000033878.14|Rab11fip1|ENSMUSG00000031488.15|RAB11 family interacting protein 1 (class I)	ENSMUST00000209377.2|Rab11fip1|ENSMUSG00000031488.15|RAB11 family interacting protein 1 (class I)
mm39_v1_chr16_+_19579651_19579804	1.83263	Gli2	ENSMUST00000119468.2|B3gnt5|ENSMUSG00000022686.15|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
mm39_v1_chr1_-_51955054_51955118	1.8124	Gli2	ENSMUST00000018561.14|Myo1b|ENSMUSG00000018417.15|myosin IB	ENSMUST00000114537.9|Myo1b|ENSMUSG00000018417.15|myosin IB
mm39_v1_chr11_-_70924288_70924339	1.77876	Gli2	ENSMUST00000238695.2|6330403K07Rik|ENSMUSG00000018451.8|RIKEN cDNA 6330403K07 gene
mm39_v1_chr7_+_101034604_101034759	1.68701	Gli2	ENSMUST00000130016.8|Arap1|ENSMUSG00000032812.19|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	ENSMUST00000134143.2|Arap1|ENSMUSG00000032812.19|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
mm39_v1_chr5_-_139805661_139805687	1.66866	Gli2	ENSMUST00000147328.2|Tmem184a|ENSMUSG00000036687.14|transmembrane protein 184a
mm39_v1_chr8_+_127790772_127791097	1.53807	Gli2	ENSMUST00000079777.12|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000160272.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162907.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162536.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000026921.13|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162665.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162602.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000160581.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000161355.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162531.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000160766.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000159537.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator
mm39_v1_chr6_-_72765935_72766044	1.51072	Gli2	ENSMUST00000114053.9|Tcf7l1|ENSMUSG00000055799.14|transcription factor 7 like 1 (T cell specific, HMG box)
mm39_v1_chr1_-_51955126_51955230	1.51033	Gli2	ENSMUST00000046390.14|Myo1b|ENSMUSG00000018417.15|myosin IB
mm39_v1_chr7_-_65020955_65021041	1.47309	Gli2	ENSMUST00000102592.10|Tjp1|ENSMUSG00000030516.15|tight junction protein 1
mm39_v1_chrX_+_99773523_99773567	1.43336	Gli2	ENSMUST00000019503.14|Gdpd2|ENSMUSG00000019359.15|glycerophosphodiester phosphodiesterase domain containing 2
mm39_v1_chrX_+_99773784_99773795	1.42683	Gli2	ENSMUST00000113744.2|Gdpd2|ENSMUSG00000019359.15|glycerophosphodiester phosphodiesterase domain containing 2
mm39_v1_chr6_-_72766224_72766245	1.42347	Gli2	ENSMUST00000069536.12|Tcf7l1|ENSMUSG00000055799.14|transcription factor 7 like 1 (T cell specific, HMG box)
mm39_v1_chr6_-_137626207_137626298	1.38495	Gli2	ENSMUST00000134630.6|Eps8|ENSMUSG00000015766.15|epidermal growth factor receptor pathway substrate 8	ENSMUST00000058210.13|Eps8|ENSMUSG00000015766.15|epidermal growth factor receptor pathway substrate 8	ENSMUST00000111878.8|Eps8|ENSMUSG00000015766.15|epidermal growth factor receptor pathway substrate 8
mm39_v1_chr12_+_58258558_58258590	1.29568	Gli2	ENSMUST00000110671.3|Sstr1|ENSMUSG00000035431.5|somatostatin receptor 1	ENSMUST00000044299.3|Sstr1|ENSMUSG00000035431.5|somatostatin receptor 1
mm39_v1_chr7_-_29204812_29204898	1.26892	Gli2	ENSMUST00000183096.8|Sipa1l3|ENSMUSG00000030583.17|signal-induced proliferation-associated 1 like 3	ENSMUST00000085809.11|Sipa1l3|ENSMUSG00000030583.17|signal-induced proliferation-associated 1 like 3
mm39_v1_chr8_+_77628916_77629104	1.2178	Gli2	ENSMUST00000109912.8|Nr3c2|ENSMUSG00000031618.14|nuclear receptor subfamily 3, group C, member 2	ENSMUST00000128862.2|Nr3c2|ENSMUSG00000031618.14|nuclear receptor subfamily 3, group C, member 2	ENSMUST00000109911.8|Nr3c2|ENSMUSG00000031618.14|nuclear receptor subfamily 3, group C, member 2
mm39_v1_chr5_-_18565353_18565395	1.15285	Gli2	ENSMUST00000074694.7|Gnai1|ENSMUSG00000057614.7|guanine nucleotide binding protein (G protein), alpha inhibiting 1
mm39_v1_chr7_-_132724889_132724912	1.14286	Gli2	ENSMUST00000166439.8|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2
mm39_v1_chr7_-_132725075_132725107	1.06007	Gli2	ENSMUST00000163601.8|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2	ENSMUST00000124096.8|Fgfr2|ENSMUSG00000030849.19|fibroblast growth factor receptor 2	ENSMUST00000033269.15|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2
mm39_v1_chr11_+_72686990_72687072	1.04446	Gli2	ENSMUST00000069395.7|Zzef1|ENSMUSG00000055670.15|zinc finger, ZZ-type with EF hand domain 1	ENSMUST00000172220.8|Zzef1|ENSMUSG00000055670.15|zinc finger, ZZ-type with EF hand domain 1
mm39_v1_chr15_+_95688763_95688781	1.02513	Gli2	ENSMUST00000227791.2|Ano6|ENSMUSG00000064210.8|anoctamin 6
mm39_v1_chrX_+_10351360_10351402	0.958232	Gli2	ENSMUST00000076354.13|Tspan7|ENSMUSG00000058254.13|tetraspanin 7	ENSMUST00000115526.2|Tspan7|ENSMUSG00000058254.13|tetraspanin 7
mm39_v1_chr4_+_120896582_120896582	0.944351	Gli2	ENSMUST00000030372.6|Col9a2|ENSMUSG00000028626.6|collagen, type IX, alpha 2
mm39_v1_chr2_+_164327988_164328051	0.942054	Gli2	ENSMUST00000109350.9|Dbndd2|ENSMUSG00000017734.16|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm39_v1_chr11_+_72687080_72687093	0.927302	Gli2	ENSMUST00000207107.2|Zzef1|ENSMUSG00000055670.15|zinc finger, ZZ-type with EF hand domain 1
mm39_v1_chrX_-_73067514_73067524	0.907692	Gli2	ENSMUST00000033769.15|Irak1|ENSMUSG00000031392.19|interleukin-1 receptor-associated kinase 1	ENSMUST00000114352.8|Irak1|ENSMUSG00000031392.19|interleukin-1 receptor-associated kinase 1	ENSMUST00000068286.12|Irak1|ENSMUSG00000031392.19|interleukin-1 receptor-associated kinase 1	ENSMUST00000114360.10|Irak1|ENSMUSG00000031392.19|interleukin-1 receptor-associated kinase 1	ENSMUST00000114354.10|Irak1|ENSMUSG00000031392.19|interleukin-1 receptor-associated kinase 1
mm39_v1_chr4_+_43401232_43401293	0.899934	Gli2	ENSMUST00000125399.2|Rusc2|ENSMUSG00000035969.16|RUN and SH3 domain containing 2
mm39_v1_chr7_-_132725137_132725154	0.861952	Gli2	ENSMUST00000170459.8|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2
mm39_v1_chr9_+_114230144_114230195	0.855031	Gli2	ENSMUST00000063042.11|Glb1|ENSMUSG00000045594.11|galactosidase, beta 1	ENSMUST00000111820.4|Tmppe|ENSMUSG00000079260.4|transmembrane protein with metallophosphoesterase domain
mm39_v1_chr6_+_137731526_137731598	0.827191	Gli2	ENSMUST00000203216.3|Dera|ENSMUSG00000030225.12|deoxyribose-phosphate aldolase (putative)	ENSMUST00000087675.9|Dera|ENSMUSG00000030225.12|deoxyribose-phosphate aldolase (putative)	ENSMUST00000203693.3|Dera|ENSMUSG00000030225.12|deoxyribose-phosphate aldolase (putative)
mm39_v1_chr2_+_117942357_117942380	0.806313	Gli2	ENSMUST00000039559.9|Thbs1|ENSMUSG00000040152.9|thrombospondin 1
mm39_v1_chr8_+_127790626_127790666	0.798952	Gli2	ENSMUST00000162309.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator
mm39_v1_chr5_+_145051090_145051126	0.779702	Gli2	ENSMUST00000196111.5|Arpc1b|ENSMUSG00000029622.17|actin related protein 2/3 complex, subunit 1B	ENSMUST00000141602.2|Arpc1b|ENSMUSG00000029622.17|actin related protein 2/3 complex, subunit 1B
mm39_v1_chr2_+_164328375_164328575	0.764924	Gli2	ENSMUST00000069385.15|Dbndd2|ENSMUSG00000017734.16|dysbindin (dystrobrevin binding protein 1) domain containing 2	ENSMUST00000143690.8|Dbndd2|ENSMUSG00000017734.16|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm39_v1_chr4_-_46536088_46536145	0.760565	Gli2	ENSMUST00000102924.3|Trim14|ENSMUSG00000039853.19|tripartite motif-containing 14	ENSMUST00000046897.13|Trim14|ENSMUSG00000039853.19|tripartite motif-containing 14
mm39_v1_chrX_-_166165743_166165757	0.758547	Gli2	ENSMUST00000026839.5|Prps2|ENSMUSG00000025742.6|phosphoribosyl pyrophosphate synthetase 2
mm39_v1_chr8_+_10056654_10056703	0.74901	Gli2	ENSMUST00000033892.9|Tnfsf13b|ENSMUSG00000031497.11|tumor necrosis factor (ligand) superfamily, member 13b
mm39_v1_chr11_+_70453666_70453723	0.742024	Gli2	ENSMUST00000072237.13|Mink1|ENSMUSG00000020827.19|misshapen-like kinase 1 (zebrafish)	ENSMUST00000072873.14|Mink1|ENSMUSG00000020827.19|misshapen-like kinase 1 (zebrafish)
mm39_v1_chr7_-_132724344_132724513	0.734022	Gli2	ENSMUST00000167218.8|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2
mm39_v1_chr1_-_172418058_172418149	0.709957	Gli2	ENSMUST00000065679.8|Slamf8|ENSMUSG00000053318.8|SLAM family member 8
mm39_v1_chr4_-_43499608_43499695	0.701849	Gli2	ENSMUST00000136005.3|Arhgef39|ENSMUSG00000051517.15|Rho guanine nucleotide exchange factor (GEF) 39	ENSMUST00000054538.13|Arhgef39|ENSMUSG00000051517.15|Rho guanine nucleotide exchange factor (GEF) 39
mm39_v1_chr7_-_65020655_65020763	0.695222	Gli2	ENSMUST00000032729.8|Tjp1|ENSMUSG00000030516.15|tight junction protein 1
mm39_v1_chr5_+_145051025_145051088	0.689615	Gli2	ENSMUST00000085679.13|Arpc1b|ENSMUSG00000029622.17|actin related protein 2/3 complex, subunit 1B
mm39_v1_chr3_+_97536120_97536180	0.661102	Gli2	ENSMUST00000107050.8|Fmo5|ENSMUSG00000028088.15|flavin containing monooxygenase 5	ENSMUST00000029729.15|Fmo5|ENSMUSG00000028088.15|flavin containing monooxygenase 5	ENSMUST00000107049.2|Fmo5|ENSMUSG00000028088.15|flavin containing monooxygenase 5
mm39_v1_chr17_+_45874800_45874899	0.658511	Gli2	ENSMUST00000224905.2|Slc35b2|ENSMUSG00000037089.12|solute carrier family 35, member B2	ENSMUST00000226086.2|Slc35b2|ENSMUSG00000037089.12|solute carrier family 35, member B2	ENSMUST00000041353.7|Slc35b2|ENSMUSG00000037089.12|solute carrier family 35, member B2
mm39_v1_chr6_+_137731599_137731613	0.652944	Gli2	ENSMUST00000204356.2|Dera|ENSMUSG00000030225.12|deoxyribose-phosphate aldolase (putative)
mm39_v1_chr17_+_24851647_24851688	0.638924	Gli2	ENSMUST00000047611.4|Nthl1|ENSMUSG00000041429.4|nth (endonuclease III)-like 1 (E.coli)
mm39_v1_chr11_+_70453724_70453748	0.63856	Gli2	ENSMUST00000102559.11|Mink1|ENSMUSG00000020827.19|misshapen-like kinase 1 (zebrafish)
mm39_v1_chr3_-_135313982_135314051	0.623343	Gli2	ENSMUST00000132668.8|Nfkb1|ENSMUSG00000028163.18|nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105
mm39_v1_chr15_+_95688712_95688755	0.616563	Gli2	ENSMUST00000071874.8|Ano6|ENSMUSG00000064210.8|anoctamin 6
mm39_v1_chr7_-_97970388_97970415	0.611109	Gli2	ENSMUST00000120520.8|Acer3|ENSMUSG00000030760.15|alkaline ceramidase 3
mm39_v1_chr9_+_100956145_100956165	0.609075	Gli2	ENSMUST00000189616.2|Msl2|ENSMUSG00000066415.5|MSL complex subunit 2
mm39_v1_chr13_-_54759086_54759112	0.605737	Gli2	ENSMUST00000049575.8|Cltb|ENSMUSG00000047547.15|clathrin, light polypeptide (Lcb)
mm39_v1_chrX_-_9529189_9529242	0.564632	Gli2	ENSMUST00000033519.3|Dynlt3|ENSMUSG00000031176.9|dynein light chain Tctex-type 3
mm39_v1_chr7_-_132725041_132725068	0.553982	Gli2	ENSMUST00000171022.8|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2
mm39_v1_chr13_+_13612136_13612136	0.540098	Gli2	ENSMUST00000005532.9|Nid1|ENSMUSG00000005397.9|nidogen 1
mm39_v1_chr8_+_10056631_10056652	0.52614	Gli2	ENSMUST00000207792.3|Tnfsf13b|ENSMUSG00000031497.11|tumor necrosis factor (ligand) superfamily, member 13b
mm39_v1_chr13_-_54759145_54759200	0.508525	Gli2	ENSMUST00000091609.11|Cltb|ENSMUSG00000047547.15|clathrin, light polypeptide (Lcb)
mm39_v1_chr7_+_40547608_40547752	0.475131	Gli2	ENSMUST00000044705.12|Vstm2b|ENSMUSG00000039257.12|V-set and transmembrane domain containing 2B
mm39_v1_chr9_+_100525807_100525823	0.465099	Gli2	ENSMUST00000133388.2|Stag1|ENSMUSG00000037286.16|stromal antigen 1
mm39_v1_chr2_+_74566740_74566859	0.462484	Gli2	ENSMUST00000111982.8|Hoxd3|ENSMUSG00000079277.10|homeobox D3
mm39_v1_chr6_-_38614155_38614184	0.457038	Gli2	ENSMUST00000096030.7|Klrg2|ENSMUSG00000071537.7|killer cell lectin-like receptor subfamily G, member 2	ENSMUST00000201345.2|Klrg2|ENSMUSG00000071537.7|killer cell lectin-like receptor subfamily G, member 2
mm39_v1_chr1_-_93406091_93406113	0.442695	Gli2	ENSMUST00000188165.2|Hdlbp|ENSMUSG00000034088.16|high density lipoprotein (HDL) binding protein
mm39_v1_chr17_-_24851549_24851577	0.433764	Gli2	ENSMUST00000227607.2|Tsc2|ENSMUSG00000002496.11|TSC complex subunit 2	ENSMUST00000227509.2|Tsc2|ENSMUSG00000002496.11|TSC complex subunit 2	ENSMUST00000227745.2|Tsc2|ENSMUSG00000002496.11|TSC complex subunit 2
mm39_v1_chr18_+_61688329_61688361	0.416159	Gli2	ENSMUST00000165123.8|Csnk1a1|ENSMUSG00000024576.15|casein kinase 1, alpha 1
mm39_v1_chr11_+_100510043_100510126	0.416134	Gli2	ENSMUST00000107376.8|Nkiras2|ENSMUSG00000017837.13|NFKB inhibitor interacting Ras-like protein 2
mm39_v1_chr2_-_37593287_37593302	0.402795	Gli2	ENSMUST00000072186.12|Strbp|ENSMUSG00000026915.17|spermatid perinuclear RNA binding protein
mm39_v1_chr14_+_51162425_51162463	0.390221	Gli2	ENSMUST00000049411.12|Apex1|ENSMUSG00000035960.15|apurinic/apyrimidinic endonuclease 1	ENSMUST00000136753.8|Apex1|ENSMUSG00000035960.15|apurinic/apyrimidinic endonuclease 1	ENSMUST00000154288.3|Apex1|ENSMUSG00000035960.15|apurinic/apyrimidinic endonuclease 1
mm39_v1_chr1_-_72576089_72576158	0.38312	Gli2	ENSMUST00000047786.6|Marchf4|ENSMUSG00000039372.6|membrane associated ring-CH-type finger 4
mm39_v1_chr4_-_150039486_150039507	0.378079	Gli2	ENSMUST00000038562.9|Spsb1|ENSMUSG00000039911.14|splA/ryanodine receptor domain and SOCS box containing 1
mm39_v1_chr15_-_56557920_56557950	0.377677	Gli2	ENSMUST00000050544.8|Has2|ENSMUSG00000022367.8|hyaluronan synthase 2
mm39_v1_chr8_+_85786684_85786716	0.372573	Gli2	ENSMUST00000095220.4|Fbxw9|ENSMUSG00000008167.15|F-box and WD-40 domain protein 9
mm39_v1_chr17_-_56916771_56916819	0.368999	Gli2	ENSMUST00000052832.6|Micos13|ENSMUSG00000049760.7|mitochondrial contact site and cristae organizing system subunit 13
mm39_v1_chr9_+_62249730_62249755	0.367758	Gli2	ENSMUST00000156461.2|Anp32a|ENSMUSG00000032249.15|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
mm39_v1_chr4_-_82939330_82939372	0.366321	Gli2	ENSMUST00000071708.12|Frem1|ENSMUSG00000059049.15|Fras1 related extracellular matrix protein 1
mm39_v1_chrX_+_160500051_160500068	0.345024	Gli2	ENSMUST00000112338.2|Rai2|ENSMUSG00000043518.8|retinoic acid induced 2
mm39_v1_chr9_+_13573756_13573899	0.344021	Gli2	ENSMUST00000177755.3|Maml2|ENSMUSG00000031925.18|mastermind like transcriptional coactivator 2
mm39_v1_chr11_+_29476385_29476420	0.343368	Gli2	ENSMUST00000133452.8|Mtif2|ENSMUSG00000020459.15|mitochondrial translational initiation factor 2
mm39_v1_chr4_+_41760454_41760521	0.335905	Gli2	ENSMUST00000108040.8|Il11ra1|ENSMUSG00000073889.11|interleukin 11 receptor, alpha chain 1
mm39_v1_chr8_+_91635192_91635248	0.334054	Gli2	ENSMUST00000211403.2|Chd9|ENSMUSG00000056608.15|chromodomain helicase DNA binding protein 9
mm39_v1_chr5_+_147206769_147206912	0.326867	Gli2	ENSMUST00000085591.7|Pdx1|ENSMUSG00000029644.8|pancreatic and duodenal homeobox 1
mm39_v1_chr2_+_130116357_130116412	0.325047	Gli2	ENSMUST00000136621.9|Nop56|ENSMUSG00000027405.17|NOP56 ribonucleoprotein	ENSMUST00000141872.2|Nop56|ENSMUSG00000027405.17|NOP56 ribonucleoprotein
mm39_v1_chr5_-_115438971_115439003	0.321831	Gli2	ENSMUST00000112090.2|Dynll1|ENSMUSG00000009013.6|dynein light chain LC8-type 1
mm39_v1_chr12_-_32000169_32000196	0.318001	Gli2	ENSMUST00000176520.8|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1
mm39_v1_chr17_-_84495364_84495381	0.313994	Gli2	ENSMUST00000060366.7|Zfp36l2|ENSMUSG00000045817.9|zinc finger protein 36, C3H type-like 2
mm39_v1_chr11_+_70453806_70453896	0.311947	Gli2	ENSMUST00000079244.12|Mink1|ENSMUSG00000020827.19|misshapen-like kinase 1 (zebrafish)	ENSMUST00000102558.11|Mink1|ENSMUSG00000020827.19|misshapen-like kinase 1 (zebrafish)
mm39_v1_chr11_+_117198958_117199010	0.311155	Gli2	ENSMUST00000153668.8|Septin9|ENSMUSG00000059248.14|septin 9
mm39_v1_chr1_-_93406515_93406544	0.307631	Gli2	ENSMUST00000170883.8|Hdlbp|ENSMUSG00000034088.16|high density lipoprotein (HDL) binding protein	ENSMUST00000189025.7|Hdlbp|ENSMUSG00000034088.16|high density lipoprotein (HDL) binding protein
mm39_v1_chr11_+_101066867_101066867	0.295424	Gli2	ENSMUST00000103109.4|Cntnap1|ENSMUSG00000017167.7|contactin associated protein-like 1
mm39_v1_chr16_+_8647959_8647966	0.262706	Gli2	ENSMUST00000023150.7|1810013L24Rik|ENSMUSG00000022507.7|RIKEN cDNA 1810013L24 gene
mm39_v1_chr18_+_61688378_61688416	0.251763	Gli2	ENSMUST00000165721.8|Csnk1a1|ENSMUSG00000024576.15|casein kinase 1, alpha 1	ENSMUST00000115246.9|Csnk1a1|ENSMUSG00000024576.15|casein kinase 1, alpha 1	ENSMUST00000166990.8|Csnk1a1|ENSMUSG00000024576.15|casein kinase 1, alpha 1	ENSMUST00000163205.8|Csnk1a1|ENSMUSG00000024576.15|casein kinase 1, alpha 1	ENSMUST00000170862.8|Csnk1a1|ENSMUSG00000024576.15|casein kinase 1, alpha 1
mm39_v1_chr2_+_120439858_120439872	0.243949	Gli2	ENSMUST00000124187.8|Haus2|ENSMUSG00000027285.14|HAUS augmin-like complex, subunit 2
mm39_v1_chr2_+_85600147_85600147	0.235802	Gli2	ENSMUST00000065626.3|Olfr1013|ENSMUSG00000053287.5|olfactory receptor 1013
mm39_v1_chr17_-_25716189_25716262	0.232458	Gli2	ENSMUST00000165183.10|Sstr5|ENSMUSG00000050824.13|somatostatin receptor 5	ENSMUST00000051864.5|Sstr5|ENSMUSG00000050824.13|somatostatin receptor 5
mm39_v1_chr9_+_107454114_107454189	0.232281	Gli2	ENSMUST00000112387.9|Hyal1|ENSMUSG00000010051.16|hyaluronoglucosaminidase 1	ENSMUST00000123005.8|Hyal1|ENSMUSG00000010051.16|hyaluronoglucosaminidase 1	ENSMUST00000010195.14|Hyal1|ENSMUSG00000010051.16|hyaluronoglucosaminidase 1	ENSMUST00000144392.2|Hyal1|ENSMUSG00000010051.16|hyaluronoglucosaminidase 1
mm39_v1_chr14_-_65187287_65187335	0.232105	Gli2	ENSMUST00000067843.10|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1	ENSMUST00000176489.8|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1	ENSMUST00000175905.8|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1	ENSMUST00000022544.14|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1	ENSMUST00000175744.8|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1	ENSMUST00000176128.8|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1
mm39_v1_chrX_+_160500623_160500653	0.230444	Gli2	ENSMUST00000061514.8|Rai2|ENSMUSG00000043518.8|retinoic acid induced 2
mm39_v1_chr11_-_121279062_121279093	0.223785	Gli2	ENSMUST00000106107.3|Rab40b|ENSMUSG00000025170.14|Rab40B, member RAS oncogene family
mm39_v1_chr5_-_92231517_92231585	0.220708	Gli2	ENSMUST00000202258.4|G3bp2|ENSMUSG00000029405.17|GTPase activating protein (SH3 domain) binding protein 2	ENSMUST00000113127.7|G3bp2|ENSMUSG00000029405.17|GTPase activating protein (SH3 domain) binding protein 2
mm39_v1_chr10_-_93425553_93425568	0.212513	Gli2	ENSMUST00000020203.7|Snrpf|ENSMUSG00000020018.7|small nuclear ribonucleoprotein polypeptide F
mm39_v1_chr14_-_55354392_55354437	0.211331	Gli2	ENSMUST00000022819.13|Jph4|ENSMUSG00000022208.13|junctophilin 4
mm39_v1_chr6_+_134897473_134897487	0.20628	Gli2	ENSMUST00000204807.2|Cdkn1b|ENSMUSG00000003031.15|cyclin-dependent kinase inhibitor 1B
mm39_v1_chr6_+_134897364_134897394	0.203836	Gli2	ENSMUST00000067327.11|Cdkn1b|ENSMUSG00000003031.15|cyclin-dependent kinase inhibitor 1B	ENSMUST00000003115.9|Cdkn1b|ENSMUSG00000003031.15|cyclin-dependent kinase inhibitor 1B
mm39_v1_chr6_+_135175031_135175107	0.200722	Gli2	ENSMUST00000130612.2|Fam234b|ENSMUSG00000030207.16|family with sequence similarity 234, member B
mm39_v1_chr12_-_32000209_32000245	0.200233	Gli2	ENSMUST00000176084.2|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1	ENSMUST00000176103.8|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1	ENSMUST00000167458.9|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1
mm39_v1_chr2_+_84867783_84867874	0.200112	Gli2	ENSMUST00000168266.8|Ssrp1|ENSMUSG00000027067.17|structure specific recognition protein 1	ENSMUST00000130729.3|Ssrp1|ENSMUSG00000027067.17|structure specific recognition protein 1
mm39_v1_chr9_+_100525501_100525594	0.186069	Gli2	ENSMUST00000146312.8|Stag1|ENSMUSG00000037286.16|stromal antigen 1	ENSMUST00000129269.8|Stag1|ENSMUSG00000037286.16|stromal antigen 1
mm39_v1_chr14_+_51162635_51162742	0.180557	Gli2	ENSMUST00000128395.2|Apex1|ENSMUSG00000035960.15|apurinic/apyrimidinic endonuclease 1
mm39_v1_chr17_-_54605479_54605488	0.174241	Gli2	ENSMUST00000233758.2|Slc5a7|ENSMUSG00000023945.8|solute carrier family 5 (choline transporter), member 7
mm39_v1_chr1_-_175453117_175453201	0.168191	Gli2	ENSMUST00000027810.14|Fh1|ENSMUSG00000026526.15|fumarate hydratase 1
mm39_v1_chr14_+_65187485_65187505	0.162811	Gli2	ENSMUST00000043914.8|Ints9|ENSMUSG00000021975.10|integrator complex subunit 9	ENSMUST00000239450.2|Ints9|ENSMUSG00000021975.10|integrator complex subunit 9
mm39_v1_chr9_+_108924457_108924480	0.158192	Gli2	ENSMUST00000072093.13|Plxnb1|ENSMUSG00000053646.14|plexin B1
mm39_v1_chr11_+_115921129_115921215	0.149242	Gli2	ENSMUST00000021116.12|Unk|ENSMUSG00000020770.14|unkempt family zinc finger	ENSMUST00000106452.2|Unk|ENSMUSG00000020770.14|unkempt family zinc finger
mm39_v1_chr2_+_130116344_130116355	0.141448	Gli2	ENSMUST00000103198.11|Nop56|ENSMUSG00000027405.17|NOP56 ribonucleoprotein
mm39_v1_chrX_-_140508177_140508259	0.129603	Gli2	ENSMUST00000067841.8|Irs4|ENSMUSG00000054667.8|insulin receptor substrate 4
mm39_v1_chr11_+_29476423_29476474	0.12677	Gli2	ENSMUST00000136351.8|Mtif2|ENSMUSG00000020459.15|mitochondrial translational initiation factor 2	ENSMUST00000020749.13|Mtif2|ENSMUSG00000020459.15|mitochondrial translational initiation factor 2	ENSMUST00000144321.8|Mtif2|ENSMUSG00000020459.15|mitochondrial translational initiation factor 2	ENSMUST00000093239.11|Mtif2|ENSMUSG00000020459.15|mitochondrial translational initiation factor 2
mm39_v1_chr9_+_100525637_100525691	0.118214	Gli2	ENSMUST00000041418.13|Stag1|ENSMUSG00000037286.16|stromal antigen 1
mm39_v1_chr2_+_69691982_69692030	0.115647	Gli2	ENSMUST00000112260.3|Ssb|ENSMUSG00000068882.14|Sjogren syndrome antigen B
mm39_v1_chrX_-_95000496_95000561	0.110406	Gli2	ENSMUST00000079987.13|Las1l|ENSMUSG00000057421.13|LAS1-like (S. cerevisiae)	ENSMUST00000113864.3|Las1l|ENSMUSG00000057421.13|LAS1-like (S. cerevisiae)
mm39_v1_chr10_-_18890281_18890337	0.0915553	Gli2	ENSMUST00000146388.2|Tnfaip3|ENSMUSG00000019850.12|tumor necrosis factor, alpha-induced protein 3
mm39_v1_chr11_-_100510423_100510485	0.0907726	Gli2	ENSMUST00000137688.9|Dnajc7|ENSMUSG00000014195.17|DnaJ heat shock protein family (Hsp40) member C7	ENSMUST00000239389.2|Dnajc7|ENSMUSG00000014195.17|DnaJ heat shock protein family (Hsp40) member C7	ENSMUST00000155152.9|Dnajc7|ENSMUSG00000014195.17|DnaJ heat shock protein family (Hsp40) member C7	ENSMUST00000154972.9|Dnajc7|ENSMUSG00000014195.17|DnaJ heat shock protein family (Hsp40) member C7	ENSMUST00000239479.2|Dnajc7|ENSMUSG00000014195.17|DnaJ heat shock protein family (Hsp40) member C7	ENSMUST00000132886.3|Dnajc7|ENSMUSG00000014195.17|DnaJ heat shock protein family (Hsp40) member C7
mm39_v1_chrX_+_7439839_7439883	0.0904058	Gli2	ENSMUST00000144719.9|Flicr|ENSMUSG00000039545.17|Foxp3 regulating long intergenic noncoding RNA	ENSMUST00000234896.2|Foxp3|ENSMUSG00000039521.14|forkhead box P3
mm39_v1_chr17_-_24428351_24428505	0.0846337	Gli2	ENSMUST00000024931.6|Ntn3|ENSMUSG00000117406.2|netrin 3
mm39_v1_chr9_-_107648144_107648206	0.0800211	Gli2	ENSMUST00000183248.3|Rbm5|ENSMUSG00000032580.13|RNA binding motif protein 5	ENSMUST00000182022.8|Rbm5|ENSMUSG00000032580.13|RNA binding motif protein 5	ENSMUST00000035199.13|Rbm5|ENSMUSG00000032580.13|RNA binding motif protein 5	ENSMUST00000182659.8|Rbm5|ENSMUSG00000032580.13|RNA binding motif protein 5
mm39_v1_chr2_-_121211410_121211428	0.0793085	Gli2	ENSMUST00000038389.15|Strc|ENSMUSG00000033498.15|stereocilin
mm39_v1_chr1_+_55127110_55127291	0.0785948	Gli2	ENSMUST00000075242.7|Hspe1|ENSMUSG00000073676.5|heat shock protein 1 (chaperonin 10)
mm39_v1_chr14_-_51162083_51162326	0.0725081	Gli2	ENSMUST00000160375.8|Osgep|ENSMUSG00000006289.15|O-sialoglycoprotein endopeptidase	ENSMUST00000162177.8|Osgep|ENSMUSG00000006289.15|O-sialoglycoprotein endopeptidase
mm39_v1_chr4_-_119151717_119151801	0.0693405	Gli2	ENSMUST00000079644.13|Ybx1|ENSMUSG00000028639.15|Y box protein 1
mm39_v1_chr16_+_3648742_3648762	0.0660966	Gli2	ENSMUST00000214238.2|Olfr15|ENSMUSG00000059043.3|olfactory receptor 15	ENSMUST00000214590.2|Olfr15|ENSMUSG00000059043.3|olfactory receptor 15
mm39_v1_chr2_-_157408239_157408281	0.0656125	Gli2	ENSMUST00000109528.9|Blcap|ENSMUSG00000067787.11|bladder cancer associated protein	ENSMUST00000088494.3|Blcap|ENSMUSG00000067787.11|bladder cancer associated protein
mm39_v1_chr9_-_108455899_108455938	0.0559861	Gli2	ENSMUST00000068700.7|Wdr6|ENSMUSG00000066357.7|WD repeat domain 6
mm39_v1_chr19_+_6952319_6952371	0.0510463	Gli2	ENSMUST00000070850.8|Ppp1r14b|ENSMUSG00000056612.8|protein phosphatase 1, regulatory inhibitor subunit 14B
mm39_v1_chr7_-_30349548_30349742	0.0486677	Gli2	ENSMUST00000108141.2|Rbm42|ENSMUSG00000036733.17|RNA binding motif protein 42	ENSMUST00000042726.14|Rbm42|ENSMUSG00000036733.17|RNA binding motif protein 42
mm39_v1_chr12_+_38830081_38830116	0.043026	Gli2	ENSMUST00000095767.11|Etv1|ENSMUSG00000004151.18|ets variant 1
mm39_v1_chr14_-_51162346_51162351	0.0327919	Gli2	ENSMUST00000159292.8|Osgep|ENSMUSG00000006289.15|O-sialoglycoprotein endopeptidase
mm39_v1_chr2_+_158636727_158636812	0.0220979	Gli2	ENSMUST00000029186.14|Dhx35|ENSMUSG00000027655.15|DEAH (Asp-Glu-Ala-His) box polypeptide 35	ENSMUST00000109478.9|Dhx35|ENSMUSG00000027655.15|DEAH (Asp-Glu-Ala-His) box polypeptide 35	ENSMUST00000156893.2|Dhx35|ENSMUSG00000027655.15|DEAH (Asp-Glu-Ala-His) box polypeptide 35
mm39_v1_chr17_+_28910393_28910419	0.0182973	Gli2	ENSMUST00000124886.9|Mapk14|ENSMUSG00000053436.16|mitogen-activated protein kinase 14	ENSMUST00000114758.9|Mapk14|ENSMUSG00000053436.16|mitogen-activated protein kinase 14
mm39_v1_chr10_+_83379805_83379873	0.0141172	Gli2	ENSMUST00000038388.7|Washc4|ENSMUSG00000034560.7|WASH complex subunit 4
