mm39_v1_chr2_+_157401998_157402050	27.7605	Gli3_Zic1	ENSMUST00000153739.9|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000173595.2|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000109526.2|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000173839.2|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000173041.8|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000173793.8|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000172487.2|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000088484.6|Nnat|ENSMUSG00000067786.17|neuronatin
mm39_v1_chr15_-_95426419_95426523	20.5945	Gli3_Zic1	ENSMUST00000229933.2|Nell2|ENSMUSG00000022454.18|NEL-like 2	ENSMUST00000166170.9|Nell2|ENSMUSG00000022454.18|NEL-like 2
mm39_v1_chr15_-_95426108_95426160	20.0972	Gli3_Zic1	ENSMUST00000075275.3|Nell2|ENSMUSG00000022454.18|NEL-like 2
mm39_v1_chr7_-_100306160_100306310	19.978	Gli3_Zic1	ENSMUST00000107046.8|Plekhb1|ENSMUSG00000030701.18|pleckstrin homology domain containing, family B (evectins) member 1	ENSMUST00000107045.9|Plekhb1|ENSMUSG00000030701.18|pleckstrin homology domain containing, family B (evectins) member 1	ENSMUST00000139708.9|Plekhb1|ENSMUSG00000030701.18|pleckstrin homology domain containing, family B (evectins) member 1
mm39_v1_chrX_+_100342749_100342808	18.6397	Gli3_Zic1	ENSMUST00000118111.8|Nlgn3|ENSMUSG00000031302.17|neuroligin 3	ENSMUST00000130555.8|Nlgn3|ENSMUSG00000031302.17|neuroligin 3	ENSMUST00000151528.8|Nlgn3|ENSMUSG00000031302.17|neuroligin 3
mm39_v1_chr7_+_98917542_98917627	18.0877	Gli3_Zic1	ENSMUST00000107100.3|Map6|ENSMUSG00000055407.15|microtubule-associated protein 6	ENSMUST00000208605.2|Map6|ENSMUSG00000055407.15|microtubule-associated protein 6
mm39_v1_chr11_+_101066867_101066867	16.8017	Gli3_Zic1	ENSMUST00000103109.4|Cntnap1|ENSMUSG00000017167.7|contactin associated protein-like 1
mm39_v1_chr4_-_68872585_68872639	16.1919	Gli3_Zic1	ENSMUST00000030036.6|Brinp1|ENSMUSG00000028351.6|bone morphogenic protein/retinoic acid inducible neural specific 1
mm39_v1_chr11_-_41891359_41891421	15.1556	Gli3_Zic1	ENSMUST00000070735.10|Gabrg2|ENSMUSG00000020436.18|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm39_v1_chr11_+_92989229_92989264	14.8842	Gli3_Zic1	ENSMUST00000107859.8|Car10|ENSMUSG00000056158.15|carbonic anhydrase 10	ENSMUST00000107861.8|Car10|ENSMUSG00000056158.15|carbonic anhydrase 10	ENSMUST00000042943.13|Car10|ENSMUSG00000056158.15|carbonic anhydrase 10	ENSMUST00000107858.9|Car10|ENSMUSG00000056158.15|carbonic anhydrase 10
mm39_v1_chr7_-_74958121_74958132	14.8582	Gli3_Zic1	ENSMUST00000085164.7|Sv2b|ENSMUSG00000053025.14|synaptic vesicle glycoprotein 2 b
mm39_v1_chr8_+_120173458_120173505	13.6631	Gli3_Zic1	ENSMUST00000098363.10|Necab2|ENSMUSG00000031837.15|N-terminal EF-hand calcium binding protein 2
mm39_v1_chr8_+_123844090_123844120	13.3908	Gli3_Zic1	ENSMUST00000037900.9|Cpne7|ENSMUSG00000034796.15|copine VII
mm39_v1_chrX_+_100342813_100342824	13.3221	Gli3_Zic1	ENSMUST00000065858.3|Nlgn3|ENSMUSG00000031302.17|neuroligin 3
mm39_v1_chr3_+_68401536_68401565	13.1947	Gli3_Zic1	ENSMUST00000182719.8|Schip1|ENSMUSG00000027777.16|schwannomin interacting protein 1
mm39_v1_chr9_+_50663171_50663202	13.1854	Gli3_Zic1	ENSMUST00000214609.2|Cryab|ENSMUSG00000032060.11|crystallin, alpha B
mm39_v1_chr7_+_98916635_98916654	12.7215	Gli3_Zic1	ENSMUST00000122101.8|Map6|ENSMUSG00000055407.15|microtubule-associated protein 6	ENSMUST00000068973.11|Map6|ENSMUSG00000055407.15|microtubule-associated protein 6	ENSMUST00000207883.2|Map6|ENSMUSG00000055407.15|microtubule-associated protein 6
mm39_v1_chr19_-_38113249_38113276	12.5749	Gli3_Zic1	ENSMUST00000112335.4|Rbp4|ENSMUSG00000024990.14|retinol binding protein 4, plasma
mm39_v1_chr6_+_30738043_30738058	11.946	Gli3_Zic1	ENSMUST00000163949.9|Mest|ENSMUSG00000051855.16|mesoderm specific transcript	ENSMUST00000124665.3|Mest|ENSMUSG00000051855.16|mesoderm specific transcript
mm39_v1_chr11_-_41891111_41891183	11.4317	Gli3_Zic1	ENSMUST00000109290.2|Gabrg2|ENSMUSG00000020436.18|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm39_v1_chr13_-_99653045_99653092	11.0121	Gli3_Zic1	ENSMUST00000064762.6|Map1b|ENSMUSG00000052727.7|microtubule-associated protein 1B
mm39_v1_chr12_+_44375747_44375845	10.8151	Gli3_Zic1	ENSMUST00000020939.16|Nrcam|ENSMUSG00000020598.17|neuronal cell adhesion molecule	ENSMUST00000220126.2|Nrcam|ENSMUSG00000020598.17|neuronal cell adhesion molecule
mm39_v1_chr3_+_31204069_31204106	10.7023	Gli3_Zic1	ENSMUST00000046174.8|Cldn11|ENSMUSG00000037625.8|claudin 11
mm39_v1_chr9_-_54569128_54569154	10.5927	Gli3_Zic1	ENSMUST00000034822.12|Acsbg1|ENSMUSG00000032281.12|acyl-CoA synthetase bubblegum family member 1
mm39_v1_chr8_-_65146079_65146108	10.5612	Gli3_Zic1	ENSMUST00000048967.9|Cpe|ENSMUSG00000037852.9|carboxypeptidase E
mm39_v1_chr7_-_118042772_118042792	10.0697	Gli3_Zic1	ENSMUST00000081574.8|Syt17|ENSMUSG00000058420.9|synaptotagmin XVII
mm39_v1_chr16_+_91066602_91066667	10.0589	Gli3_Zic1	ENSMUST00000056882.7|Olig1|ENSMUSG00000046160.7|oligodendrocyte transcription factor 1
mm39_v1_chr12_+_44375665_44375740	9.9035	Gli3_Zic1	ENSMUST00000110748.4|Nrcam|ENSMUSG00000020598.17|neuronal cell adhesion molecule
mm39_v1_chr11_-_121279062_121279093	9.85018	Gli3_Zic1	ENSMUST00000106107.3|Rab40b|ENSMUSG00000025170.14|Rab40B, member RAS oncogene family
mm39_v1_chr10_-_63926044_63926076	9.7199	Gli3_Zic1	ENSMUST00000105439.2|Lrrtm3|ENSMUSG00000042846.9|leucine rich repeat transmembrane neuronal 3
mm39_v1_chr6_-_124410452_124410474	9.55634	Gli3_Zic1	ENSMUST00000124998.2|Clstn3|ENSMUSG00000008153.13|calsyntenin 3	ENSMUST00000238807.2|Clstn3|ENSMUSG00000008153.13|calsyntenin 3
mm39_v1_chr19_-_38113696_38113754	9.38174	Gli3_Zic1	ENSMUST00000025951.14|Rbp4|ENSMUSG00000024990.14|retinol binding protein 4, plasma	ENSMUST00000237287.2|Rbp4|ENSMUSG00000024990.14|retinol binding protein 4, plasma
mm39_v1_chr7_+_98916677_98916724	9.29139	Gli3_Zic1	ENSMUST00000127492.2|Map6|ENSMUSG00000055407.15|microtubule-associated protein 6
mm39_v1_chr11_-_42072990_42073049	9.26389	Gli3_Zic1	ENSMUST00000205546.2|Gabra1|ENSMUSG00000010803.14|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
mm39_v1_chr19_+_8641369_8641484	9.20854	Gli3_Zic1	ENSMUST00000035444.10|Chrm1|ENSMUSG00000032773.10|cholinergic receptor, muscarinic 1, CNS	ENSMUST00000163785.2|Chrm1|ENSMUSG00000032773.10|cholinergic receptor, muscarinic 1, CNS
mm39_v1_chr3_+_45332831_45332862	9.01967	Gli3_Zic1	ENSMUST00000193252.2|Pcdh10|ENSMUSG00000049100.16|protocadherin 10	ENSMUST00000171554.8|Pcdh10|ENSMUSG00000049100.16|protocadherin 10	ENSMUST00000166126.7|Pcdh10|ENSMUSG00000049100.16|protocadherin 10	ENSMUST00000170695.4|Pcdh10|ENSMUSG00000049100.16|protocadherin 10
mm39_v1_chr19_+_4761181_4761286	8.91424	Gli3_Zic1	ENSMUST00000008991.8|Sptbn2|ENSMUSG00000067889.8|spectrin beta, non-erythrocytic 2
mm39_v1_chr7_-_111379170_111379200	8.73276	Gli3_Zic1	ENSMUST00000049430.15|Galnt18|ENSMUSG00000038296.15|polypeptide N-acetylgalactosaminyltransferase 18	ENSMUST00000106663.2|Galnt18|ENSMUSG00000038296.15|polypeptide N-acetylgalactosaminyltransferase 18
mm39_v1_chr15_-_85466009_85466022	8.71809	Gli3_Zic1	ENSMUST00000023015.15|Wnt7b|ENSMUSG00000022382.16|wingless-type MMTV integration site family, member 7B
mm39_v1_chr2_+_49509288_49509355	8.65204	Gli3_Zic1	ENSMUST00000028102.14|Kif5c|ENSMUSG00000026764.16|kinesin family member 5C
mm39_v1_chr8_+_55407872_55407889	8.59405	Gli3_Zic1	ENSMUST00000033915.9|Gpm6a|ENSMUSG00000031517.9|glycoprotein m6a
mm39_v1_chr1_+_50966670_50966702	8.46302	Gli3_Zic1	ENSMUST00000081851.4|Tmeff2|ENSMUSG00000026109.15|transmembrane protein with EGF-like and two follistatin-like domains 2
mm39_v1_chr1_-_135095344_135095419	8.4367	Gli3_Zic1	ENSMUST00000027682.9|Gpr37l1|ENSMUSG00000026424.9|G protein-coupled receptor 37-like 1
mm39_v1_chr7_-_142211203_142211233	8.2862	Gli3_Zic1	ENSMUST00000097936.9|Igf2|ENSMUSG00000048583.17|insulin-like growth factor 2	ENSMUST00000000033.12|Igf2|ENSMUSG00000048583.17|insulin-like growth factor 2
mm39_v1_chr11_+_98644340_98644412	8.20118	Gli3_Zic1	ENSMUST00000124072.2|Thra|ENSMUSG00000058756.14|thyroid hormone receptor alpha
mm39_v1_chr11_-_42072920_42072931	8.16831	Gli3_Zic1	ENSMUST00000207274.2|Gabra1|ENSMUSG00000010803.14|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
mm39_v1_chr11_+_103540391_103540400	8.1274	Gli3_Zic1	ENSMUST00000057870.4|Rprml|ENSMUSG00000046215.4|reprimo-like
mm39_v1_chr2_-_92264374_92264398	8.12288	Gli3_Zic1	ENSMUST00000111278.2|Cry2|ENSMUSG00000068742.12|cryptochrome 2 (photolyase-like)	ENSMUST00000090559.12|Cry2|ENSMUSG00000068742.12|cryptochrome 2 (photolyase-like)
mm39_v1_chr3_-_95811993_95812006	8.03518	Gli3_Zic1	ENSMUST00000147962.3|Car14|ENSMUSG00000038526.15|carbonic anhydrase 14	ENSMUST00000036181.15|Car14|ENSMUSG00000038526.15|carbonic anhydrase 14
mm39_v1_chrX_-_93585668_93585749	7.94085	Gli3_Zic1	ENSMUST00000026142.8|Maged1|ENSMUSG00000025151.17|MAGE family member D1
mm39_v1_chr7_+_5059855_5059930	7.81768	Gli3_Zic1	ENSMUST00000208161.2|Ccdc106|ENSMUSG00000035228.16|coiled-coil domain containing 106	ENSMUST00000207215.2|Ccdc106|ENSMUSG00000035228.16|coiled-coil domain containing 106
mm39_v1_chr5_-_118382926_118383181	7.78028	Gli3_Zic1	ENSMUST00000117177.8|Rnft2|ENSMUSG00000032850.17|ring finger protein, transmembrane 2	ENSMUST00000133372.2|Rnft2|ENSMUSG00000032850.17|ring finger protein, transmembrane 2	ENSMUST00000154786.8|Rnft2|ENSMUSG00000032850.17|ring finger protein, transmembrane 2	ENSMUST00000121369.8|Rnft2|ENSMUSG00000032850.17|ring finger protein, transmembrane 2
mm39_v1_chr7_+_5060159_5060199	7.72146	Gli3_Zic1	ENSMUST00000045543.8|Ccdc106|ENSMUSG00000035228.16|coiled-coil domain containing 106
mm39_v1_chr4_+_48585275_48585365	7.68559	Gli3_Zic1	ENSMUST00000123476.8|Tmeff1|ENSMUSG00000028347.15|transmembrane protein with EGF-like and two follistatin-like domains 1
mm39_v1_chr11_-_96714813_96714850	7.57084	Gli3_Zic1	ENSMUST00000142065.2|Nfe2l1|ENSMUSG00000038615.18|nuclear factor, erythroid derived 2,-like 1	ENSMUST00000167110.8|Nfe2l1|ENSMUSG00000038615.18|nuclear factor, erythroid derived 2,-like 1
mm39_v1_chr7_+_5059703_5059741	7.54207	Gli3_Zic1	ENSMUST00000208042.2|Ccdc106|ENSMUSG00000035228.16|coiled-coil domain containing 106	ENSMUST00000207974.2|Ccdc106|ENSMUSG00000035228.16|coiled-coil domain containing 106
mm39_v1_chr5_-_5315968_5316292	7.44241	Gli3_Zic1	ENSMUST00000115451.8|Cdk14|ENSMUSG00000028926.16|cyclin-dependent kinase 14	ENSMUST00000115452.8|Cdk14|ENSMUSG00000028926.16|cyclin-dependent kinase 14	ENSMUST00000131392.8|Cdk14|ENSMUSG00000028926.16|cyclin-dependent kinase 14
mm39_v1_chr1_+_162466717_162466727	7.09663	Gli3_Zic1	ENSMUST00000028020.11|Myoc|ENSMUSG00000026697.11|myocilin
mm39_v1_chr6_-_28830344_28830344	7.09269	Gli3_Zic1	ENSMUST00000171353.2|Lrrc4|ENSMUSG00000049939.7|leucine rich repeat containing 4
mm39_v1_chr19_-_38113056_38113173	7.07372	Gli3_Zic1	ENSMUST00000236283.2|Rbp4|ENSMUSG00000024990.14|retinol binding protein 4, plasma
mm39_v1_chr6_-_115229128_115229166	7.03927	Gli3_Zic1	ENSMUST00000032462.9|Timp4|ENSMUSG00000030317.9|tissue inhibitor of metalloproteinase 4
mm39_v1_chr10_-_49664839_49664865	6.89406	Gli3_Zic1	ENSMUST00000220263.2|Grik2|ENSMUSG00000056073.17|glutamate receptor, ionotropic, kainate 2 (beta 2)	ENSMUST00000218823.2|Grik2|ENSMUSG00000056073.17|glutamate receptor, ionotropic, kainate 2 (beta 2)
mm39_v1_chr14_+_70768257_70768287	6.85764	Gli3_Zic1	ENSMUST00000047331.8|Lgi3|ENSMUSG00000033595.8|leucine-rich repeat LGI family, member 3
mm39_v1_chr2_+_70392351_70392386	6.78259	Gli3_Zic1	ENSMUST00000094934.11|Gad1|ENSMUSG00000070880.11|glutamate decarboxylase 1
mm39_v1_chr1_-_134162231_134162316	6.65128	Gli3_Zic1	ENSMUST00000169927.2|Adora1|ENSMUSG00000042429.9|adenosine A1 receptor
mm39_v1_chr5_+_27022355_27022426	6.61605	Gli3_Zic1	ENSMUST00000071500.13|Dpp6|ENSMUSG00000061576.16|dipeptidylpeptidase 6
mm39_v1_chr6_-_119307685_119307761	6.60902	Gli3_Zic1	ENSMUST00000112756.8|Lrtm2|ENSMUSG00000055003.15|leucine-rich repeats and transmembrane domains 2	ENSMUST00000068351.14|Lrtm2|ENSMUSG00000055003.15|leucine-rich repeats and transmembrane domains 2
mm39_v1_chr5_+_30745447_30745514	6.57239	Gli3_Zic1	ENSMUST00000066295.5|Kcnk3|ENSMUSG00000049265.9|potassium channel, subfamily K, member 3
mm39_v1_chr6_-_115228800_115228829	6.57055	Gli3_Zic1	ENSMUST00000205131.2|Timp4|ENSMUSG00000030317.9|tissue inhibitor of metalloproteinase 4
mm39_v1_chr13_+_54519161_54519173	6.56899	Gli3_Zic1	ENSMUST00000026985.9|Cplx2|ENSMUSG00000025867.9|complexin 2
mm39_v1_chrX_-_141173487_141173531	6.53878	Gli3_Zic1	ENSMUST00000112904.8|Acsl4|ENSMUSG00000031278.13|acyl-CoA synthetase long-chain family member 4	ENSMUST00000112903.8|Acsl4|ENSMUSG00000031278.13|acyl-CoA synthetase long-chain family member 4	ENSMUST00000033634.5|Acsl4|ENSMUSG00000031278.13|acyl-CoA synthetase long-chain family member 4
mm39_v1_chr15_-_53765869_53765926	6.50188	Gli3_Zic1	ENSMUST00000078673.14|Samd12|ENSMUSG00000058656.14|sterile alpha motif domain containing 12
mm39_v1_chr16_+_20514925_20514963	6.47705	Gli3_Zic1	ENSMUST00000128273.2|Fam131a|ENSMUSG00000050821.15|family with sequence similarity 131, member A
mm39_v1_chrX_-_146337046_146337082	6.46165	Gli3_Zic1	ENSMUST00000112819.9|Lrch2|ENSMUSG00000031290.15|leucine-rich repeats and calponin homology (CH) domain containing 2	ENSMUST00000136789.8|Lrch2|ENSMUSG00000031290.15|leucine-rich repeats and calponin homology (CH) domain containing 2
mm39_v1_chr1_-_134163102_134163184	6.44085	Gli3_Zic1	ENSMUST00000187631.2|Adora1|ENSMUSG00000042429.9|adenosine A1 receptor	ENSMUST00000038191.8|Adora1|ENSMUSG00000042429.9|adenosine A1 receptor	ENSMUST00000086465.6|Adora1|ENSMUSG00000042429.9|adenosine A1 receptor
mm39_v1_chr5_+_93241385_93241430	6.41691	Gli3_Zic1	ENSMUST00000201421.4|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000202415.4|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000202217.3|Septin11|ENSMUSG00000058013.12|septin 11
mm39_v1_chr9_+_106247943_106248054	6.40646	Gli3_Zic1	ENSMUST00000173748.2|Dusp7|ENSMUSG00000053716.10|dual specificity phosphatase 7
mm39_v1_chr16_-_20060053_20060113	6.39954	Gli3_Zic1	ENSMUST00000040880.9|Map6d1|ENSMUSG00000041205.9|MAP6 domain containing 1
mm39_v1_chr11_-_70924288_70924339	6.37264	Gli3_Zic1	ENSMUST00000238695.2|6330403K07Rik|ENSMUSG00000018451.8|RIKEN cDNA 6330403K07 gene
mm39_v1_chr9_-_54568950_54569001	6.30486	Gli3_Zic1	ENSMUST00000128624.2|Acsbg1|ENSMUSG00000032281.12|acyl-CoA synthetase bubblegum family member 1
mm39_v1_chr14_+_70768289_70768319	6.26902	Gli3_Zic1	ENSMUST00000226548.2|Lgi3|ENSMUSG00000033595.8|leucine-rich repeat LGI family, member 3
mm39_v1_chr14_+_84680993_84681009	6.22111	Gli3_Zic1	ENSMUST00000071370.7|Pcdh17|ENSMUSG00000035566.8|protocadherin 17
mm39_v1_chr19_+_4771089_4771193	6.15777	Gli3_Zic1	ENSMUST00000238976.3|Sptbn2|ENSMUSG00000067889.8|spectrin beta, non-erythrocytic 2
mm39_v1_chr5_-_128897086_128897146	6.13039	Gli3_Zic1	ENSMUST00000198941.5|Rimbp2|ENSMUSG00000029420.15|RIMS binding protein 2	ENSMUST00000199537.5|Rimbp2|ENSMUSG00000029420.15|RIMS binding protein 2
mm39_v1_chr12_+_95658987_95659011	6.11692	Gli3_Zic1	ENSMUST00000057324.4|Flrt2|ENSMUSG00000047414.7|fibronectin leucine rich transmembrane protein 2
mm39_v1_chr9_-_44646487_44646510	5.94212	Gli3_Zic1	ENSMUST00000034611.15|Phldb1|ENSMUSG00000048537.17|pleckstrin homology like domain, family B, member 1
mm39_v1_chr5_+_14075281_14075305	5.80007	Gli3_Zic1	ENSMUST00000073957.8|Sema3e|ENSMUSG00000063531.8|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
mm39_v1_chr19_-_6134703_6134723	5.7813	Gli3_Zic1	ENSMUST00000161548.8|Zfpl1|ENSMUSG00000024792.10|zinc finger like protein 1
mm39_v1_chr9_+_27702243_27702299	5.75728	Gli3_Zic1	ENSMUST00000115243.9|Opcml|ENSMUSG00000062257.14|opioid binding protein/cell adhesion molecule-like
mm39_v1_chr7_-_19504446_19504472	5.71417	Gli3_Zic1	ENSMUST00000003061.14|Bcam|ENSMUSG00000002980.15|basal cell adhesion molecule
mm39_v1_chr6_-_113508536_113508628	5.7015	Gli3_Zic1	ENSMUST00000032425.7|Emc3|ENSMUSG00000030286.7|ER membrane protein complex subunit 3
mm39_v1_chr17_-_13070780_13070804	5.67826	Gli3_Zic1	ENSMUST00000162389.2|Mas1|ENSMUSG00000068037.12|MAS1 oncogene	ENSMUST00000162119.8|Mas1|ENSMUSG00000068037.12|MAS1 oncogene	ENSMUST00000159223.8|Mas1|ENSMUSG00000068037.12|MAS1 oncogene
mm39_v1_chrX_+_7656225_7656247	5.67456	Gli3_Zic1	ENSMUST00000136930.8|Gripap1|ENSMUSG00000031153.17|GRIP1 associated protein 1	ENSMUST00000115675.9|Gripap1|ENSMUSG00000031153.17|GRIP1 associated protein 1	ENSMUST00000101694.10|Gripap1|ENSMUSG00000031153.17|GRIP1 associated protein 1
mm39_v1_chr13_-_95170755_95170796	5.56711	Gli3_Zic1	ENSMUST00000162670.8|Pde8b|ENSMUSG00000021684.18|phosphodiesterase 8B
mm39_v1_chr10_+_106306122_106306228	5.56222	Gli3_Zic1	ENSMUST00000029404.17|Ppfia2|ENSMUSG00000053825.16|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	ENSMUST00000217854.2|Ppfia2|ENSMUSG00000053825.16|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm39_v1_chr1_-_125839897_125839951	5.53599	Gli3_Zic1	ENSMUST00000159417.2|Lypd1|ENSMUSG00000026344.10|Ly6/Plaur domain containing 1
mm39_v1_chr11_-_116545071_116545151	5.44932	Gli3_Zic1	ENSMUST00000021166.6|Cygb|ENSMUSG00000020810.6|cytoglobin
mm39_v1_chr6_+_110622533_110622549	5.4129	Gli3_Zic1	ENSMUST00000071076.13|Grm7|ENSMUSG00000056755.14|glutamate receptor, metabotropic 7	ENSMUST00000172951.2|Grm7|ENSMUSG00000056755.14|glutamate receptor, metabotropic 7
mm39_v1_chr7_+_4693759_4693927	5.35704	Gli3_Zic1	ENSMUST00000048248.9|Brsk1|ENSMUSG00000035390.17|BR serine/threonine kinase 1
mm39_v1_chr7_+_4693603_4693672	5.34928	Gli3_Zic1	ENSMUST00000120836.8|Brsk1|ENSMUSG00000035390.17|BR serine/threonine kinase 1
mm39_v1_chr11_+_87651359_87651413	5.32865	Gli3_Zic1	ENSMUST00000039627.12|Tspoap1|ENSMUSG00000034156.17|TSPO associated protein 1	ENSMUST00000100644.10|Tspoap1|ENSMUSG00000034156.17|TSPO associated protein 1
mm39_v1_chr10_+_40505985_40506073	5.30152	Gli3_Zic1	ENSMUST00000019977.8|Ddo|ENSMUSG00000063428.9|D-aspartate oxidase	ENSMUST00000214102.2|Ddo|ENSMUSG00000063428.9|D-aspartate oxidase	ENSMUST00000213503.2|Ddo|ENSMUSG00000063428.9|D-aspartate oxidase	ENSMUST00000213442.2|Ddo|ENSMUSG00000063428.9|D-aspartate oxidase	ENSMUST00000216830.2|Ddo|ENSMUSG00000063428.9|D-aspartate oxidase
mm39_v1_chr1_-_33946802_33946897	5.22031	Gli3_Zic1	ENSMUST00000115161.8|Bend6|ENSMUSG00000042182.17|BEN domain containing 6	ENSMUST00000129464.8|Bend6|ENSMUSG00000042182.17|BEN domain containing 6	ENSMUST00000062289.11|Bend6|ENSMUSG00000042182.17|BEN domain containing 6
mm39_v1_chr12_+_109419371_109419446	5.2139	Gli3_Zic1	ENSMUST00000109844.11|Dlk1|ENSMUSG00000040856.18|delta like non-canonical Notch ligand 1	ENSMUST00000109842.9|Dlk1|ENSMUSG00000040856.18|delta like non-canonical Notch ligand 1	ENSMUST00000109843.8|Dlk1|ENSMUSG00000040856.18|delta like non-canonical Notch ligand 1
mm39_v1_chr4_-_155103837_155103895	5.18122	Gli3_Zic1	ENSMUST00000126098.2|Plch2|ENSMUSG00000029055.18|phospholipase C, eta 2	ENSMUST00000176194.8|Plch2|ENSMUSG00000029055.18|phospholipase C, eta 2
mm39_v1_chr18_+_5593566_5593602	5.12113	Gli3_Zic1	ENSMUST00000160910.2|Zeb1|ENSMUSG00000024238.16|zinc finger E-box binding homeobox 1
mm39_v1_chr16_-_30369378_30369413	5.11801	Gli3_Zic1	ENSMUST00000140402.8|Tmem44|ENSMUSG00000022537.19|transmembrane protein 44
mm39_v1_chr2_+_106523532_106523624	5.09721	Gli3_Zic1	ENSMUST00000111063.8|Mpped2|ENSMUSG00000016386.16|metallophosphoesterase domain containing 2
mm39_v1_chr7_+_81824544_81824602	5.07449	Gli3_Zic1	ENSMUST00000032874.14|Sh3gl3|ENSMUSG00000030638.14|SH3-domain GRB2-like 3
mm39_v1_chr4_+_42950367_42950476	5.06342	Gli3_Zic1	ENSMUST00000084662.12|Dnajb5|ENSMUSG00000036052.15|DnaJ heat shock protein family (Hsp40) member B5
mm39_v1_chr17_-_24428351_24428505	5.06159	Gli3_Zic1	ENSMUST00000024931.6|Ntn3|ENSMUSG00000117406.2|netrin 3
mm39_v1_chr1_+_153776323_153776352	5.04065	Gli3_Zic1	ENSMUST00000140685.4|Glul|ENSMUSG00000026473.17|glutamate-ammonia ligase (glutamine synthetase)	ENSMUST00000139476.8|Glul|ENSMUSG00000026473.17|glutamate-ammonia ligase (glutamine synthetase)
mm39_v1_chr6_+_86172196_86172224	4.98641	Gli3_Zic1	ENSMUST00000032066.13|Tgfa|ENSMUSG00000029999.15|transforming growth factor alpha
mm39_v1_chr9_+_50664288_50664384	4.95439	Gli3_Zic1	ENSMUST00000214962.2|Cryab|ENSMUSG00000032060.11|crystallin, alpha B	ENSMUST00000216755.2|Cryab|ENSMUSG00000032060.11|crystallin, alpha B
mm39_v1_chr4_-_4138432_4138479	4.94949	Gli3_Zic1	ENSMUST00000070375.8|Penk|ENSMUSG00000045573.10|preproenkephalin
mm39_v1_chr9_+_50664207_50664252	4.89219	Gli3_Zic1	ENSMUST00000034562.9|Cryab|ENSMUSG00000032060.11|crystallin, alpha B
mm39_v1_chr4_+_127881786_127881848	4.85347	Gli3_Zic1	ENSMUST00000184063.3|Csmd2|ENSMUSG00000028804.21|CUB and Sushi multiple domains 2
mm39_v1_chrX_+_7656251_7656285	4.8478	Gli3_Zic1	ENSMUST00000140540.2|Gripap1|ENSMUSG00000031153.17|GRIP1 associated protein 1
mm39_v1_chr7_-_142453722_142453751	4.82381	Gli3_Zic1	ENSMUST00000000219.10|Th|ENSMUSG00000000214.12|tyrosine hydroxylase
mm39_v1_chr17_+_17669082_17669150	4.81865	Gli3_Zic1	ENSMUST00000140134.2|Lix1|ENSMUSG00000047786.13|limb and CNS expressed 1
mm39_v1_chr3_+_94386385_94386456	4.76781	Gli3_Zic1	ENSMUST00000199775.5|Celf3|ENSMUSG00000028137.10|CUGBP, Elav-like family member 3
mm39_v1_chr12_+_109419575_109419586	4.74383	Gli3_Zic1	ENSMUST00000173539.8|Dlk1|ENSMUSG00000040856.18|delta like non-canonical Notch ligand 1	ENSMUST00000109841.9|Dlk1|ENSMUSG00000040856.18|delta like non-canonical Notch ligand 1
mm39_v1_chr13_+_55097200_55097293	4.68919	Gli3_Zic1	ENSMUST00000026994.14|Unc5a|ENSMUSG00000025876.16|unc-5 netrin receptor A	ENSMUST00000109994.9|Unc5a|ENSMUSG00000025876.16|unc-5 netrin receptor A
mm39_v1_chr14_+_47121487_47121632	4.6494	Gli3_Zic1	ENSMUST00000137543.9|Samd4|ENSMUSG00000021838.18|sterile alpha motif domain containing 4
mm39_v1_chr15_-_91075933_91076028	4.63824	Gli3_Zic1	ENSMUST00000069511.8|Abcd2|ENSMUSG00000055782.10|ATP-binding cassette, sub-family D (ALD), member 2
mm39_v1_chr13_-_9815276_9815306	4.61946	Gli3_Zic1	ENSMUST00000130151.8|Zmynd11|ENSMUSG00000021156.18|zinc finger, MYND domain containing 11
mm39_v1_chr3_-_26386609_26386609	4.58754	Gli3_Zic1	ENSMUST00000193603.6|Nlgn1|ENSMUSG00000063887.14|neuroligin 1
mm39_v1_chr7_+_73040908_73041044	4.57149	Gli3_Zic1	ENSMUST00000128471.2|Rgma|ENSMUSG00000070509.16|repulsive guidance molecule family member A	ENSMUST00000139780.3|Rgma|ENSMUSG00000070509.16|repulsive guidance molecule family member A
mm39_v1_chr17_+_37361523_37361566	4.55959	Gli3_Zic1	ENSMUST00000172792.8|Gabbr1|ENSMUSG00000024462.18|gamma-aminobutyric acid (GABA) B receptor, 1	ENSMUST00000174347.2|Gabbr1|ENSMUSG00000024462.18|gamma-aminobutyric acid (GABA) B receptor, 1
mm39_v1_chr13_-_36918424_36918466	4.54831	Gli3_Zic1	ENSMUST00000037623.15|Nrn1|ENSMUSG00000039114.17|neuritin 1
mm39_v1_chr17_-_24424456_24424536	4.47702	Gli3_Zic1	ENSMUST00000201583.2|Tbc1d24|ENSMUSG00000036473.17|TBC1 domain family, member 24	ENSMUST00000202925.4|Tbc1d24|ENSMUSG00000036473.17|TBC1 domain family, member 24	ENSMUST00000167791.9|Tbc1d24|ENSMUSG00000036473.17|TBC1 domain family, member 24	ENSMUST00000201960.4|Tbc1d24|ENSMUSG00000036473.17|TBC1 domain family, member 24	ENSMUST00000040474.11|Tbc1d24|ENSMUSG00000036473.17|TBC1 domain family, member 24	ENSMUST00000201089.4|Tbc1d24|ENSMUSG00000036473.17|TBC1 domain family, member 24	ENSMUST00000201301.4|Tbc1d24|ENSMUSG00000036473.17|TBC1 domain family, member 24	ENSMUST00000201805.4|Tbc1d24|ENSMUSG00000036473.17|TBC1 domain family, member 24	ENSMUST00000168410.9|Tbc1d24|ENSMUSG00000036473.17|TBC1 domain family, member 24	ENSMUST00000097376.10|Tbc1d24|ENSMUSG00000036473.17|TBC1 domain family, member 24
mm39_v1_chr11_-_116249883_116249930	4.47252	Gli3_Zic1	ENSMUST00000149147.8|Rnf157|ENSMUSG00000052949.15|ring finger protein 157
mm39_v1_chr4_+_123077286_123077344	4.45886	Gli3_Zic1	ENSMUST00000126995.2|Hpcal4|ENSMUSG00000046093.10|hippocalcin-like 4
mm39_v1_chr6_-_35285045_35285071	4.44916	Gli3_Zic1	ENSMUST00000031868.5|Slc13a4|ENSMUSG00000029843.5|solute carrier family 13 (sodium/sulfate symporters), member 4
mm39_v1_chr19_+_6434416_6434453	4.41277	Gli3_Zic1	ENSMUST00000035269.15|Pygm|ENSMUSG00000032648.15|muscle glycogen phosphorylase	ENSMUST00000113483.2|Pygm|ENSMUSG00000032648.15|muscle glycogen phosphorylase
mm39_v1_chr2_-_77000936_77000990	4.40481	Gli3_Zic1	ENSMUST00000164114.9|Ccdc141|ENSMUSG00000044033.17|coiled-coil domain containing 141	ENSMUST00000049544.14|Ccdc141|ENSMUSG00000044033.17|coiled-coil domain containing 141
mm39_v1_chr5_+_35971767_35971797	4.38867	Gli3_Zic1	ENSMUST00000114203.8|Ablim2|ENSMUSG00000029095.18|actin-binding LIM protein 2	ENSMUST00000150146.2|Ablim2|ENSMUSG00000029095.18|actin-binding LIM protein 2
mm39_v1_chrX_+_72108393_72108393	4.38577	Gli3_Zic1	ENSMUST00000060418.8|Pnma3|ENSMUSG00000046287.8|paraneoplastic antigen MA3
mm39_v1_chr14_+_55797934_55797990	4.37482	Gli3_Zic1	ENSMUST00000121622.8|Dcaf11|ENSMUSG00000022214.16|DDB1 and CUL4 associated factor 11	ENSMUST00000143431.2|Dcaf11|ENSMUSG00000022214.16|DDB1 and CUL4 associated factor 11	ENSMUST00000150481.8|Dcaf11|ENSMUSG00000022214.16|DDB1 and CUL4 associated factor 11
mm39_v1_chr3_+_145464413_145464451	4.37113	Gli3_Zic1	ENSMUST00000029845.15|Ddah1|ENSMUSG00000028194.16|dimethylarginine dimethylaminohydrolase 1
mm39_v1_chr7_-_62862261_62862279	4.36379	Gli3_Zic1	ENSMUST00000032738.7|Chrna7|ENSMUSG00000030525.9|cholinergic receptor, nicotinic, alpha polypeptide 7
mm39_v1_chr11_+_72909811_72909870	4.35108	Gli3_Zic1	ENSMUST00000092937.13|Camkk1|ENSMUSG00000020785.18|calcium/calmodulin-dependent protein kinase kinase 1, alpha
mm39_v1_chr7_-_45016138_45016261	4.34269	Gli3_Zic1	ENSMUST00000211067.2|Ppfia3|ENSMUSG00000003863.19|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3	ENSMUST00000003961.16|Ppfia3|ENSMUSG00000003863.19|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
mm39_v1_chr5_+_71857261_71857292	4.30737	Gli3_Zic1	ENSMUST00000031122.9|Gabrb1|ENSMUSG00000029212.12|gamma-aminobutyric acid (GABA) A receptor, subunit beta 1
mm39_v1_chr10_-_5144699_5144765	4.28742	Gli3_Zic1	ENSMUST00000215467.2|Syne1|ENSMUSG00000096054.4|spectrin repeat containing, nuclear envelope 1
mm39_v1_chr12_+_4284009_4284067	4.26693	Gli3_Zic1	ENSMUST00000179139.3|Ptrhd1|ENSMUSG00000096199.3|peptidyl-tRNA hydrolase domain containing 1
mm39_v1_chr2_+_119629995_119630052	4.21933	Gli3_Zic1	ENSMUST00000028763.10|Tyro3|ENSMUSG00000027298.18|TYRO3 protein tyrosine kinase 3
mm39_v1_chr4_-_62126662_62126724	4.19318	Gli3_Zic1	ENSMUST00000222050.2|Zfp37|ENSMUSG00000028389.13|zinc finger protein 37	ENSMUST00000068822.4|Zfp37|ENSMUSG00000028389.13|zinc finger protein 37
mm39_v1_chrX_-_141173330_141173341	4.19202	Gli3_Zic1	ENSMUST00000112907.8|Acsl4|ENSMUSG00000031278.13|acyl-CoA synthetase long-chain family member 4
mm39_v1_chr1_+_72863641_72863662	4.17218	Gli3_Zic1	ENSMUST00000047328.11|Igfbp2|ENSMUSG00000039323.19|insulin-like growth factor binding protein 2
mm39_v1_chr12_+_24548568_24548618	4.15946	Gli3_Zic1	ENSMUST00000222710.2|Taf1b|ENSMUSG00000059669.9|TATA-box binding protein associated factor, RNA polymerase I, B
mm39_v1_chr12_+_74044435_74044519	4.09957	Gli3_Zic1	ENSMUST00000221220.2|Syt16|ENSMUSG00000044912.12|synaptotagmin XVI
mm39_v1_chr6_-_101354858_101354977	4.02196	Gli3_Zic1	ENSMUST00000075994.11|Pdzrn3|ENSMUSG00000035357.18|PDZ domain containing RING finger 3
mm39_v1_chr12_+_76451177_76451201	3.9938	Gli3_Zic1	ENSMUST00000219555.2|Hspa2|ENSMUSG00000059970.8|heat shock protein 2
mm39_v1_chr9_+_40180726_40180737	3.98974	Gli3_Zic1	ENSMUST00000171835.9|Scn3b|ENSMUSG00000049281.17|sodium channel, voltage-gated, type III, beta
mm39_v1_chr15_-_78602313_78602313	3.98721	Gli3_Zic1	ENSMUST00000229441.2|Elfn2|ENSMUSG00000043460.8|leucine rich repeat and fibronectin type III, extracellular 2
mm39_v1_chr16_-_85599994_85600009	3.96421	Gli3_Zic1	ENSMUST00000023610.15|Adamts1|ENSMUSG00000022893.15|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1
mm39_v1_chr5_-_125135434_125135475	3.94671	Gli3_Zic1	ENSMUST00000134404.6|Ncor2|ENSMUSG00000029478.17|nuclear receptor co-repressor 2	ENSMUST00000199561.2|Ncor2|ENSMUSG00000029478.17|nuclear receptor co-repressor 2
mm39_v1_chr11_-_35871300_35871406	3.94152	Gli3_Zic1	ENSMUST00000018993.7|Wwc1|ENSMUSG00000018849.7|WW, C2 and coiled-coil domain containing 1
mm39_v1_chr11_+_49792627_49792723	3.93957	Gli3_Zic1	ENSMUST00000093141.12|Rasgef1c|ENSMUSG00000020374.17|RasGEF domain family, member 1C	ENSMUST00000093142.12|Rasgef1c|ENSMUSG00000020374.17|RasGEF domain family, member 1C
mm39_v1_chr3_+_115801106_115801202	3.91645	Gli3_Zic1	ENSMUST00000029575.12|Extl2|ENSMUSG00000027963.15|exostosin-like glycosyltransferase 2	ENSMUST00000106501.8|Extl2|ENSMUSG00000027963.15|exostosin-like glycosyltransferase 2
mm39_v1_chr18_-_39062201_39062222	3.89601	Gli3_Zic1	ENSMUST00000134864.2|Fgf1|ENSMUSG00000036585.17|fibroblast growth factor 1
mm39_v1_chr11_-_99313078_99313086	3.82817	Gli3_Zic1	ENSMUST00000017741.4|Krt12|ENSMUSG00000020912.5|keratin 12
mm39_v1_chr5_+_35971697_35971714	3.82462	Gli3_Zic1	ENSMUST00000130233.8|Ablim2|ENSMUSG00000029095.18|actin-binding LIM protein 2
mm39_v1_chr9_+_120132962_120133026	3.80909	Gli3_Zic1	ENSMUST00000048121.13|Myrip|ENSMUSG00000041794.14|myosin VIIA and Rab interacting protein
mm39_v1_chr1_-_69147185_69147224	3.7778	Gli3_Zic1	ENSMUST00000121473.8|Erbb4|ENSMUSG00000062209.16|erb-b2 receptor tyrosine kinase 4
mm39_v1_chr7_+_29483383_29483512	3.76808	Gli3_Zic1	ENSMUST00000032803.12|Zfp30|ENSMUSG00000047473.15|zinc finger protein 30	ENSMUST00000122387.2|Zfp30|ENSMUSG00000047473.15|zinc finger protein 30
mm39_v1_chr13_-_9815350_9815405	3.75043	Gli3_Zic1	ENSMUST00000110636.9|Zmynd11|ENSMUSG00000021156.18|zinc finger, MYND domain containing 11	ENSMUST00000152725.8|Zmynd11|ENSMUSG00000021156.18|zinc finger, MYND domain containing 11
mm39_v1_chr2_-_29142965_29143025	3.7406	Gli3_Zic1	ENSMUST00000155949.2|6530402F18Rik|ENSMUSG00000079499.10|RIKEN cDNA 6530402F18 gene	ENSMUST00000071201.5|Ntng2|ENSMUSG00000035513.20|netrin G2	ENSMUST00000154682.8|6530402F18Rik|ENSMUSG00000079499.10|RIKEN cDNA 6530402F18 gene	ENSMUST00000028141.6|6530402F18Rik|ENSMUSG00000079499.10|RIKEN cDNA 6530402F18 gene
mm39_v1_chr16_-_90807983_90808001	3.70289	Gli3_Zic1	ENSMUST00000170853.8|Synj1|ENSMUSG00000022973.19|synaptojanin 1	ENSMUST00000130813.3|Synj1|ENSMUSG00000022973.19|synaptojanin 1	ENSMUST00000118390.10|Synj1|ENSMUSG00000022973.19|synaptojanin 1
mm39_v1_chr11_+_53410552_53410627	3.70138	Gli3_Zic1	ENSMUST00000108987.8|Septin8|ENSMUSG00000018398.19|septin 8	ENSMUST00000121334.8|Septin8|ENSMUSG00000018398.19|septin 8	ENSMUST00000117061.8|Septin8|ENSMUSG00000018398.19|septin 8
mm39_v1_chr2_-_32271833_32271920	3.68868	Gli3_Zic1	ENSMUST00000146423.2|1110008P14Rik|ENSMUSG00000039195.5|RIKEN cDNA 1110008P14 gene
mm39_v1_chr19_+_45003304_45003445	3.68345	Gli3_Zic1	ENSMUST00000039016.14|Lzts2|ENSMUSG00000035342.15|leucine zipper, putative tumor suppressor 2
mm39_v1_chr12_+_109419454_109419467	3.67917	Gli3_Zic1	ENSMUST00000109846.11|Dlk1|ENSMUSG00000040856.18|delta like non-canonical Notch ligand 1
mm39_v1_chr14_+_55798517_55798528	3.66766	Gli3_Zic1	ENSMUST00000117701.8|Dcaf11|ENSMUSG00000022214.16|DDB1 and CUL4 associated factor 11
mm39_v1_chr16_+_20551853_20551910	3.65401	Gli3_Zic1	ENSMUST00000115423.8|Chrd|ENSMUSG00000006958.15|chordin	ENSMUST00000007171.13|Chrd|ENSMUSG00000006958.15|chordin	ENSMUST00000232646.2|Chrd|ENSMUSG00000006958.15|chordin
mm39_v1_chr16_+_18595589_18595606	3.63684	Gli3_Zic1	ENSMUST00000043577.3|Cldn5|ENSMUSG00000041378.3|claudin 5
mm39_v1_chr7_+_57240894_57240956	3.62698	Gli3_Zic1	ENSMUST00000039697.14|Gabrb3|ENSMUSG00000033676.14|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
mm39_v1_chr13_+_118851214_118851238	3.59577	Gli3_Zic1	ENSMUST00000022246.9|Fgf10|ENSMUSG00000021732.15|fibroblast growth factor 10
mm39_v1_chr11_-_58692770_58692793	3.57246	Gli3_Zic1	ENSMUST00000094156.12|Fam183b|ENSMUSG00000049154.13|family with sequence similarity 183, member B	ENSMUST00000239007.2|Fam183b|ENSMUSG00000049154.13|family with sequence similarity 183, member B	ENSMUST00000238886.2|Fam183b|ENSMUSG00000049154.13|family with sequence similarity 183, member B	ENSMUST00000060581.5|Fam183b|ENSMUSG00000049154.13|family with sequence similarity 183, member B
mm39_v1_chr1_-_51955054_51955118	3.54937	Gli3_Zic1	ENSMUST00000018561.14|Myo1b|ENSMUSG00000018417.15|myosin IB	ENSMUST00000114537.9|Myo1b|ENSMUSG00000018417.15|myosin IB
mm39_v1_chr1_-_75482975_75483046	3.51267	Gli3_Zic1	ENSMUST00000113567.10|Obsl1|ENSMUSG00000026211.19|obscurin-like 1	ENSMUST00000113565.3|Obsl1|ENSMUSG00000026211.19|obscurin-like 1
mm39_v1_chr14_+_55798362_55798432	3.49335	Gli3_Zic1	ENSMUST00000072530.11|Dcaf11|ENSMUSG00000022214.16|DDB1 and CUL4 associated factor 11	ENSMUST00000128490.9|Dcaf11|ENSMUSG00000022214.16|DDB1 and CUL4 associated factor 11
mm39_v1_chr15_-_43733389_43733456	3.4609	Gli3_Zic1	ENSMUST00000067469.6|Tmem74|ENSMUSG00000054409.6|transmembrane protein 74
mm39_v1_chr7_+_26958150_26958240	3.4453	Gli3_Zic1	ENSMUST00000079258.7|Numbl|ENSMUSG00000063160.13|numb-like
mm39_v1_chr2_+_20727274_20727436	3.33813	Gli3_Zic1	ENSMUST00000114607.8|Etl4|ENSMUSG00000036617.18|enhancer trap locus 4
mm39_v1_chr8_+_127790772_127791097	3.33335	Gli3_Zic1	ENSMUST00000079777.12|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000160272.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162907.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162536.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000026921.13|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162665.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162602.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000160581.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000161355.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162531.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000160766.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000159537.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator
mm39_v1_chr4_+_42949814_42949924	3.32134	Gli3_Zic1	ENSMUST00000037872.10|Dnajb5|ENSMUSG00000036052.15|DnaJ heat shock protein family (Hsp40) member B5	ENSMUST00000098112.9|Dnajb5|ENSMUSG00000036052.15|DnaJ heat shock protein family (Hsp40) member B5
mm39_v1_chr3_+_136376440_136376531	3.31127	Gli3_Zic1	ENSMUST00000056758.9|Ppp3ca|ENSMUSG00000028161.18|protein phosphatase 3, catalytic subunit, alpha isoform
mm39_v1_chr3_+_94385602_94385652	3.30896	Gli3_Zic1	ENSMUST00000199884.5|Celf3|ENSMUSG00000028137.10|CUGBP, Elav-like family member 3	ENSMUST00000198316.5|Celf3|ENSMUSG00000028137.10|CUGBP, Elav-like family member 3	ENSMUST00000197558.5|Celf3|ENSMUSG00000028137.10|CUGBP, Elav-like family member 3
mm39_v1_chr4_-_62126598_62126660	3.30628	Gli3_Zic1	ENSMUST00000221329.2|Zfp37|ENSMUSG00000028389.13|zinc finger protein 37	ENSMUST00000129511.3|Zfp37|ENSMUSG00000028389.13|zinc finger protein 37
mm39_v1_chr17_+_37356854_37356869	3.29833	Gli3_Zic1	ENSMUST00000025338.16|Gabbr1|ENSMUSG00000024462.18|gamma-aminobutyric acid (GABA) B receptor, 1
mm39_v1_chr19_+_42034231_42034336	3.28468	Gli3_Zic1	ENSMUST00000172244.8|Hoga1|ENSMUSG00000025176.15|4-hydroxy-2-oxoglutarate aldolase 1	ENSMUST00000081714.5|Hoga1|ENSMUSG00000025176.15|4-hydroxy-2-oxoglutarate aldolase 1
mm39_v1_chr19_-_5135510_5135559	3.28406	Gli3_Zic1	ENSMUST00000140389.8|Tmem151a|ENSMUSG00000061451.14|transmembrane protein 151A	ENSMUST00000151413.2|Tmem151a|ENSMUSG00000061451.14|transmembrane protein 151A	ENSMUST00000077066.8|Tmem151a|ENSMUSG00000061451.14|transmembrane protein 151A
mm39_v1_chr18_+_34973605_34973646	3.27653	Gli3_Zic1	ENSMUST00000043484.8|Reep2|ENSMUSG00000038555.8|receptor accessory protein 2
mm39_v1_chr5_+_115417725_115417776	3.16835	Gli3_Zic1	ENSMUST00000040421.11|Coq5|ENSMUSG00000041733.11|coenzyme Q5 methyltransferase
mm39_v1_chr11_+_68986043_68986115	3.15857	Gli3_Zic1	ENSMUST00000101004.9|Per1|ENSMUSG00000020893.18|period circadian clock 1
mm39_v1_chr17_-_23818458_23818464	3.12013	Gli3_Zic1	ENSMUST00000057029.5|Zfp13|ENSMUSG00000062012.15|zinc finger protein 13
mm39_v1_chr6_+_149310471_149310593	3.1163	Gli3_Zic1	ENSMUST00000086829.11|Bicd1|ENSMUSG00000003452.16|BICD cargo adaptor 1	ENSMUST00000111513.9|Bicd1|ENSMUSG00000003452.16|BICD cargo adaptor 1
mm39_v1_chr2_+_170573727_170573838	3.10721	Gli3_Zic1	ENSMUST00000029075.5|Dok5|ENSMUSG00000027560.5|docking protein 5
mm39_v1_chr12_+_76450941_76451038	3.09851	Gli3_Zic1	ENSMUST00000080449.7|Hspa2|ENSMUSG00000059970.8|heat shock protein 2
mm39_v1_chr2_-_35995283_35995446	3.08192	Gli3_Zic1	ENSMUST00000112960.8|Lhx6|ENSMUSG00000026890.20|LIM homeobox protein 6	ENSMUST00000112967.12|Lhx6|ENSMUSG00000026890.20|LIM homeobox protein 6	ENSMUST00000112963.8|Lhx6|ENSMUSG00000026890.20|LIM homeobox protein 6
mm39_v1_chr9_+_113570506_113570551	3.07312	Gli3_Zic1	ENSMUST00000213663.2|Clasp2|ENSMUSG00000033392.17|CLIP associating protein 2
mm39_v1_chr13_+_54722823_54722828	3.00978	Gli3_Zic1	ENSMUST00000026988.11|Arl10|ENSMUSG00000025870.11|ADP-ribosylation factor-like 10
mm39_v1_chr13_-_21257469_21257469	3.00567	Gli3_Zic1	ENSMUST00000058168.2|Olfr1370|ENSMUSG00000042869.3|olfactory receptor 1370
mm39_v1_chr9_-_113855776_113855833	2.9929	Gli3_Zic1	ENSMUST00000035090.14|Fbxl2|ENSMUSG00000032507.16|F-box and leucine-rich repeat protein 2
mm39_v1_chr15_-_78428865_78428887	2.98761	Gli3_Zic1	ENSMUST00000053239.4|Sstr3|ENSMUSG00000044933.4|somatostatin receptor 3
mm39_v1_chr2_-_104542467_104542525	2.97498	Gli3_Zic1	ENSMUST00000111118.8|Tcp11l1|ENSMUSG00000027175.11|t-complex 11 like 1	ENSMUST00000028597.4|Tcp11l1|ENSMUSG00000027175.11|t-complex 11 like 1
mm39_v1_chr15_-_94302139_94302209	2.97491	Gli3_Zic1	ENSMUST00000035342.11|Adamts20|ENSMUSG00000022449.15|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20	ENSMUST00000155907.2|Adamts20|ENSMUSG00000022449.15|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20
mm39_v1_chr1_-_51955126_51955230	2.9241	Gli3_Zic1	ENSMUST00000046390.14|Myo1b|ENSMUSG00000018417.15|myosin IB
mm39_v1_chr4_-_108637700_108637957	2.9223	Gli3_Zic1	ENSMUST00000106658.8|Zfyve9|ENSMUSG00000034557.15|zinc finger, FYVE domain containing 9
mm39_v1_chr11_+_69656797_69656854	2.89716	Gli3_Zic1	ENSMUST00000108642.8|Zbtb4|ENSMUSG00000018750.15|zinc finger and BTB domain containing 4	ENSMUST00000156932.8|Zbtb4|ENSMUSG00000018750.15|zinc finger and BTB domain containing 4
mm39_v1_chr11_+_101137231_101137393	2.89038	Gli3_Zic1	ENSMUST00000122006.8|Ramp2|ENSMUSG00000001240.14|receptor (calcitonin) activity modifying protein 2	ENSMUST00000151830.2|Ramp2|ENSMUSG00000001240.14|receptor (calcitonin) activity modifying protein 2
mm39_v1_chr9_-_79700789_79700801	2.86941	Gli3_Zic1	ENSMUST00000120690.2|Tmem30a|ENSMUSG00000032328.13|transmembrane protein 30A
mm39_v1_chr8_-_86567506_86567585	2.86121	Gli3_Zic1	ENSMUST00000034140.9|Itfg1|ENSMUSG00000031703.9|integrin alpha FG-GAP repeat containing 1
mm39_v1_chr4_-_108637979_108638000	2.82863	Gli3_Zic1	ENSMUST00000106657.8|Zfyve9|ENSMUSG00000034557.15|zinc finger, FYVE domain containing 9
mm39_v1_chr12_+_3415107_3415142	2.82351	Gli3_Zic1	ENSMUST00000220210.2|Kif3c|ENSMUSG00000020668.11|kinesin family member 3C
mm39_v1_chr5_-_5564730_5564830	2.81002	Gli3_Zic1	ENSMUST00000115445.8|Cldn12|ENSMUSG00000046798.15|claudin 12	ENSMUST00000179804.8|Cldn12|ENSMUSG00000046798.15|claudin 12	ENSMUST00000125110.2|Cldn12|ENSMUSG00000046798.15|claudin 12	ENSMUST00000115446.8|Cldn12|ENSMUSG00000046798.15|claudin 12
mm39_v1_chr3_+_88049633_88049790	2.77349	Gli3_Zic1	ENSMUST00000001455.13|Mef2d|ENSMUSG00000001419.18|myocyte enhancer factor 2D	ENSMUST00000119251.8|Mef2d|ENSMUSG00000001419.18|myocyte enhancer factor 2D
mm39_v1_chr3_+_95532282_95532332	2.75329	Gli3_Zic1	ENSMUST00000058230.13|Ensa|ENSMUSG00000038619.13|endosulfine alpha	ENSMUST00000037983.6|Ensa|ENSMUSG00000038619.13|endosulfine alpha
mm39_v1_chr13_-_9815173_9815243	2.74351	Gli3_Zic1	ENSMUST00000062658.15|Zmynd11|ENSMUSG00000021156.18|zinc finger, MYND domain containing 11	ENSMUST00000222358.2|Zmynd11|ENSMUSG00000021156.18|zinc finger, MYND domain containing 11
mm39_v1_chr13_+_54722833_54722906	2.72631	Gli3_Zic1	ENSMUST00000156024.2|Arl10|ENSMUSG00000025870.11|ADP-ribosylation factor-like 10
mm39_v1_chr3_+_94385661_94385801	2.72265	Gli3_Zic1	ENSMUST00000200342.5|Celf3|ENSMUSG00000028137.10|CUGBP, Elav-like family member 3
mm39_v1_chr15_-_89024824_89024913	2.72057	Gli3_Zic1	ENSMUST00000088827.8|Mapk12|ENSMUSG00000022610.11|mitogen-activated protein kinase 12
mm39_v1_chr16_-_90808196_90808319	2.71511	Gli3_Zic1	ENSMUST00000121759.8|Synj1|ENSMUSG00000022973.19|synaptojanin 1
mm39_v1_chrX_+_73372664_73372682	2.70703	Gli3_Zic1	ENSMUST00000004326.4|Plxna3|ENSMUSG00000031398.14|plexin A3
mm39_v1_chr13_-_14696391_14696437	2.68899	Gli3_Zic1	ENSMUST00000223550.2|Hecw1|ENSMUSG00000021301.10|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
mm39_v1_chr1_+_129201081_129201206	2.6489	Gli3_Zic1	ENSMUST00000073527.13|Thsd7b|ENSMUSG00000042581.15|thrombospondin, type I, domain containing 7B	ENSMUST00000040311.14|Thsd7b|ENSMUSG00000042581.15|thrombospondin, type I, domain containing 7B
mm39_v1_chr17_+_27874546_27874596	2.64425	Gli3_Zic1	ENSMUST00000232437.2|Pacsin1|ENSMUSG00000040276.16|protein kinase C and casein kinase substrate in neurons 1
mm39_v1_chr5_-_148865429_148865480	2.62768	Gli3_Zic1	ENSMUST00000149169.3|Katnal1|ENSMUSG00000041298.16|katanin p60 subunit A-like 1	ENSMUST00000047257.15|Katnal1|ENSMUSG00000041298.16|katanin p60 subunit A-like 1
mm39_v1_chr12_+_103354915_103354982	2.62625	Gli3_Zic1	ENSMUST00000101094.9|Otub2|ENSMUSG00000021203.16|OTU domain, ubiquitin aldehyde binding 2	ENSMUST00000021620.13|Otub2|ENSMUSG00000021203.16|OTU domain, ubiquitin aldehyde binding 2
mm39_v1_chr3_+_88049875_88049892	2.60424	Gli3_Zic1	ENSMUST00000107558.9|Mef2d|ENSMUSG00000001419.18|myocyte enhancer factor 2D	ENSMUST00000107559.3|Mef2d|ENSMUSG00000001419.18|myocyte enhancer factor 2D
mm39_v1_chr3_+_79793237_79793309	2.58539	Gli3_Zic1	ENSMUST00000029567.9|Gask1b|ENSMUSG00000027955.17|golgi associated kinase 1B
mm39_v1_chr10_+_87357657_87357780	2.56515	Gli3_Zic1	ENSMUST00000020241.17|Pah|ENSMUSG00000020051.18|phenylalanine hydroxylase
mm39_v1_chr7_-_6334239_6334290	2.56211	Gli3_Zic1	ENSMUST00000127658.2|Zfp583|ENSMUSG00000030443.17|zinc finger protein 583	ENSMUST00000062765.14|Zfp583|ENSMUSG00000030443.17|zinc finger protein 583
mm39_v1_chr16_-_84970617_84970654	2.54656	Gli3_Zic1	ENSMUST00000226232.2|App|ENSMUSG00000022892.12|amyloid beta (A4) precursor protein	ENSMUST00000227021.2|App|ENSMUSG00000022892.12|amyloid beta (A4) precursor protein	ENSMUST00000005406.12|App|ENSMUSG00000022892.12|amyloid beta (A4) precursor protein	ENSMUST00000227723.2|App|ENSMUSG00000022892.12|amyloid beta (A4) precursor protein
mm39_v1_chr7_-_141925947_141926030	2.53801	Gli3_Zic1	ENSMUST00000084412.6|Ifitm10|ENSMUSG00000045777.15|interferon induced transmembrane protein 10
mm39_v1_chr18_-_43506277_43506339	2.5239	Gli3_Zic1	ENSMUST00000118043.8|Dpysl3|ENSMUSG00000024501.21|dihydropyrimidinase-like 3
mm39_v1_chr6_+_85888850_85888863	2.51124	Gli3_Zic1	ENSMUST00000200680.4|Tprkb|ENSMUSG00000054226.14|Tp53rk binding protein
mm39_v1_chr9_-_79700660_79700712	2.51008	Gli3_Zic1	ENSMUST00000034878.12|Tmem30a|ENSMUSG00000032328.13|transmembrane protein 30A
mm39_v1_chr8_-_13939964_13940005	2.49637	Gli3_Zic1	ENSMUST00000209371.2|Coprs|ENSMUSG00000031458.9|coordinator of PRMT5, differentiation stimulator
mm39_v1_chr10_+_69369632_69369677	2.46426	Gli3_Zic1	ENSMUST00000182155.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial	ENSMUST00000183169.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial	ENSMUST00000183148.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial
mm39_v1_chr15_-_98851566_98851584	2.459	Gli3_Zic1	ENSMUST00000097014.7|Tuba1a|ENSMUSG00000072235.7|tubulin, alpha 1A
mm39_v1_chr2_+_150628655_150628714	2.45237	Gli3_Zic1	ENSMUST00000045441.8|Pygb|ENSMUSG00000033059.8|brain glycogen phosphorylase
mm39_v1_chr9_-_108455899_108455938	2.44999	Gli3_Zic1	ENSMUST00000068700.7|Wdr6|ENSMUSG00000066357.7|WD repeat domain 6
mm39_v1_chr5_-_116729870_116729889	2.44551	Gli3_Zic1	ENSMUST00000076124.7|Srrm4|ENSMUSG00000063919.12|serine/arginine repetitive matrix 4
mm39_v1_chr5_+_67464284_67464318	2.42628	Gli3_Zic1	ENSMUST00000113676.6|Slc30a9|ENSMUSG00000029221.16|solute carrier family 30 (zinc transporter), member 9	ENSMUST00000162372.8|Slc30a9|ENSMUSG00000029221.16|solute carrier family 30 (zinc transporter), member 9
mm39_v1_chr8_+_77628916_77629104	2.42198	Gli3_Zic1	ENSMUST00000109912.8|Nr3c2|ENSMUSG00000031618.14|nuclear receptor subfamily 3, group C, member 2	ENSMUST00000128862.2|Nr3c2|ENSMUSG00000031618.14|nuclear receptor subfamily 3, group C, member 2	ENSMUST00000109911.8|Nr3c2|ENSMUSG00000031618.14|nuclear receptor subfamily 3, group C, member 2
mm39_v1_chr5_+_31454787_31454932	2.34223	Gli3_Zic1	ENSMUST00000201166.4|Gckr|ENSMUSG00000059434.10|glucokinase regulatory protein	ENSMUST00000072228.9|Gckr|ENSMUSG00000059434.10|glucokinase regulatory protein
mm39_v1_chrX_-_149595873_149596150	2.32863	Gli3_Zic1	ENSMUST00000131241.2|Maged2|ENSMUSG00000025268.16|MAGE family member D2	ENSMUST00000147152.3|Maged2|ENSMUSG00000025268.16|MAGE family member D2	ENSMUST00000143843.8|Maged2|ENSMUSG00000025268.16|MAGE family member D2
mm39_v1_chr11_-_58221145_58221182	2.32679	Gli3_Zic1	ENSMUST00000186859.2|Zfp672|ENSMUSG00000049755.15|zinc finger protein 672	ENSMUST00000065533.3|Zfp672|ENSMUSG00000049755.15|zinc finger protein 672
mm39_v1_chr6_-_18030584_18030584	2.32063	Gli3_Zic1	ENSMUST00000010941.6|Wnt2|ENSMUSG00000010797.7|wingless-type MMTV integration site family, member 2
mm39_v1_chr7_+_12615091_12615132	2.31029	Gli3_Zic1	ENSMUST00000144578.2|Zfp128|ENSMUSG00000060397.7|zinc finger protein 128
mm39_v1_chr8_-_96161414_96161458	2.30264	Gli3_Zic1	ENSMUST00000211908.2|Cfap20|ENSMUSG00000031796.8|cilia and flagella associated protein 20
mm39_v1_chr4_-_128856213_128856242	2.29938	Gli3_Zic1	ENSMUST00000119354.8|Azin2|ENSMUSG00000028789.17|antizyme inhibitor 2	ENSMUST00000106068.8|Azin2|ENSMUSG00000028789.17|antizyme inhibitor 2	ENSMUST00000030581.10|Azin2|ENSMUSG00000028789.17|antizyme inhibitor 2
mm39_v1_chrX_-_165368675_165368734	2.29843	Gli3_Zic1	ENSMUST00000000412.3|Egfl6|ENSMUSG00000000402.3|EGF-like-domain, multiple 6
mm39_v1_chr1_+_128031055_128031097	2.2611	Gli3_Zic1	ENSMUST00000188381.7|R3hdm1|ENSMUSG00000056211.14|R3H domain containing 1	ENSMUST00000187900.7|R3hdm1|ENSMUSG00000056211.14|R3H domain containing 1	ENSMUST00000036288.11|R3hdm1|ENSMUSG00000056211.14|R3H domain containing 1
mm39_v1_chrX_-_9529189_9529242	2.25655	Gli3_Zic1	ENSMUST00000033519.3|Dynlt3|ENSMUSG00000031176.9|dynein light chain Tctex-type 3
mm39_v1_chr5_-_32903687_32903755	2.22628	Gli3_Zic1	ENSMUST00000135248.2|Pisd|ENSMUSG00000023452.20|phosphatidylserine decarboxylase
mm39_v1_chr7_+_18659787_18659826	2.21334	Gli3_Zic1	ENSMUST00000032571.10|Nova2|ENSMUSG00000030411.17|NOVA alternative splicing regulator 2	ENSMUST00000220302.2|Nova2|ENSMUSG00000030411.17|NOVA alternative splicing regulator 2
mm39_v1_chr16_+_17379749_17379906	2.20613	Gli3_Zic1	ENSMUST00000171002.10|P2rx6|ENSMUSG00000022758.15|purinergic receptor P2X, ligand-gated ion channel, 6	ENSMUST00000023441.11|P2rx6|ENSMUSG00000022758.15|purinergic receptor P2X, ligand-gated ion channel, 6
mm39_v1_chrX_-_149595711_149595801	2.20304	Gli3_Zic1	ENSMUST00000112697.10|Maged2|ENSMUSG00000025268.16|MAGE family member D2
mm39_v1_chr16_-_85347305_85347321	2.18636	Gli3_Zic1	ENSMUST00000175700.8|Cyyr1|ENSMUSG00000041134.16|cysteine and tyrosine-rich protein 1	ENSMUST00000114174.3|Cyyr1|ENSMUSG00000041134.16|cysteine and tyrosine-rich protein 1
mm39_v1_chr8_-_72175949_72175998	2.17221	Gli3_Zic1	ENSMUST00000125092.2|Fcho1|ENSMUSG00000070000.14|FCH domain only 1
mm39_v1_chr2_+_26969384_26969397	2.15172	Gli3_Zic1	ENSMUST00000091233.7|Adamtsl2|ENSMUSG00000036040.15|ADAMTS-like 2
mm39_v1_chr6_-_35516700_35516823	2.14228	Gli3_Zic1	ENSMUST00000201026.2|Mtpn|ENSMUSG00000029840.9|myotrophin	ENSMUST00000031866.9|Mtpn|ENSMUSG00000029840.9|myotrophin
mm39_v1_chr1_-_133728779_133728805	2.1365	Gli3_Zic1	ENSMUST00000143567.8|Atp2b4|ENSMUSG00000026463.18|ATPase, Ca++ transporting, plasma membrane 4
mm39_v1_chr17_-_24869241_24869301	2.13053	Gli3_Zic1	ENSMUST00000234557.2|Slc9a3r2|ENSMUSG00000002504.16|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	ENSMUST00000002572.6|Slc9a3r2|ENSMUSG00000002504.16|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
mm39_v1_chr2_+_26220403_26220453	2.1284	Gli3_Zic1	ENSMUST00000114134.9|Gpsm1|ENSMUSG00000026930.16|G-protein signalling modulator 1 (AGS3-like, C. elegans)	ENSMUST00000127453.2|Gpsm1|ENSMUSG00000026930.16|G-protein signalling modulator 1 (AGS3-like, C. elegans)
mm39_v1_chr5_-_37981919_37981933	2.11897	Gli3_Zic1	ENSMUST00000063116.10|Msx1|ENSMUSG00000048450.11|msh homeobox 1
mm39_v1_chr17_+_37356872_37356972	2.11507	Gli3_Zic1	ENSMUST00000174456.8|Gabbr1|ENSMUSG00000024462.18|gamma-aminobutyric acid (GABA) B receptor, 1
mm39_v1_chr6_+_114380786_114380786	2.11506	Gli3_Zic1	ENSMUST00000161220.2|Hrh1|ENSMUSG00000053004.10|histamine receptor H1
mm39_v1_chr7_-_126073994_126074148	2.11117	Gli3_Zic1	ENSMUST00000205733.2|Sh2b1|ENSMUSG00000030733.11|SH2B adaptor protein 1	ENSMUST00000205889.2|Sh2b1|ENSMUSG00000030733.11|SH2B adaptor protein 1
mm39_v1_chr4_-_110149916_110149929	2.10619	Gli3_Zic1	ENSMUST00000106601.8|Elavl4|ENSMUSG00000028546.18|ELAV like RNA binding protein 4
mm39_v1_chr5_+_118383291_118383362	2.0926	Gli3_Zic1	ENSMUST00000049138.8|Spring1|ENSMUSG00000032840.8|SREBF pathway regulator in golgi 1
mm39_v1_chr4_-_147932817_147932887	2.08158	Gli3_Zic1	ENSMUST00000105718.8|Zfp933|ENSMUSG00000059423.14|zinc finger protein 933	ENSMUST00000135798.2|Zfp933|ENSMUSG00000059423.14|zinc finger protein 933
mm39_v1_chr8_-_41494890_41494903	2.07952	Gli3_Zic1	ENSMUST00000051379.14|Mtus1|ENSMUSG00000045636.17|mitochondrial tumor suppressor 1
mm39_v1_chr18_-_38734389_38734468	2.05181	Gli3_Zic1	ENSMUST00000025295.8|Spry4|ENSMUSG00000024427.8|sprouty RTK signaling antagonist 4
mm39_v1_chr8_-_13940234_13940300	2.04672	Gli3_Zic1	ENSMUST00000033839.9|Coprs|ENSMUSG00000031458.9|coordinator of PRMT5, differentiation stimulator
mm39_v1_chr10_+_69369590_69369603	2.03333	Gli3_Zic1	ENSMUST00000182884.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial
mm39_v1_chr8_-_85751897_85751925	2.02907	Gli3_Zic1	ENSMUST00000064314.10|Get3|ENSMUSG00000052456.10|guided entry of tail-anchored proteins factor 3, ATPase
mm39_v1_chrX_-_58613428_58613454	2.01761	Gli3_Zic1	ENSMUST00000119833.8|Fgf13|ENSMUSG00000031137.18|fibroblast growth factor 13	ENSMUST00000131319.8|Fgf13|ENSMUSG00000031137.18|fibroblast growth factor 13
mm39_v1_chr16_-_17711950_17711969	1.98181	Gli3_Zic1	ENSMUST00000155943.9|Dgcr2|ENSMUSG00000003166.21|DiGeorge syndrome critical region gene 2
mm39_v1_chr5_-_5564873_5564891	1.96161	Gli3_Zic1	ENSMUST00000060947.14|Cldn12|ENSMUSG00000046798.15|claudin 12
mm39_v1_chr2_+_181139016_181139037	1.94517	Gli3_Zic1	ENSMUST00000108799.10|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2
mm39_v1_chr4_+_54947976_54948054	1.94324	Gli3_Zic1	ENSMUST00000098070.10|Zfp462|ENSMUSG00000060206.12|zinc finger protein 462
mm39_v1_chr6_+_114380627_114380627	1.91643	Gli3_Zic1	ENSMUST00000161650.3|Hrh1|ENSMUSG00000053004.10|histamine receptor H1
mm39_v1_chr11_+_51180747_51180838	1.90516	Gli3_Zic1	ENSMUST00000102765.9|Col23a1|ENSMUSG00000063564.14|collagen, type XXIII, alpha 1
mm39_v1_chr14_-_100521888_100521934	1.89652	Gli3_Zic1	ENSMUST00000226774.2|Klf12|ENSMUSG00000072294.6|Kruppel-like factor 12
mm39_v1_chr4_-_41517326_41517338	1.87166	Gli3_Zic1	ENSMUST00000030152.13|1110017D15Rik|ENSMUSG00000028441.13|RIKEN cDNA 1110017D15 gene	ENSMUST00000095126.5|1110017D15Rik|ENSMUSG00000028441.13|RIKEN cDNA 1110017D15 gene
mm39_v1_chr7_+_45333828_45333853	1.8599	Gli3_Zic1	ENSMUST00000107742.11|Ntn5|ENSMUSG00000070564.16|netrin 5	ENSMUST00000183120.4|Ntn5|ENSMUSG00000070564.16|netrin 5
mm39_v1_chr6_-_24664959_24665039	1.84628	Gli3_Zic1	ENSMUST00000041737.8|Wasl|ENSMUSG00000029684.15|WASP like actin nucleation promoting factor	ENSMUST00000031695.15|Wasl|ENSMUSG00000029684.15|WASP like actin nucleation promoting factor
mm39_v1_chr2_-_30691709_30691755	1.82921	Gli3_Zic1	ENSMUST00000050003.9|1700001O22Rik|ENSMUSG00000044320.15|RIKEN cDNA 1700001O22 gene
mm39_v1_chr7_-_142209755_142209792	1.81016	Gli3_Zic1	ENSMUST00000178921.2|Igf2|ENSMUSG00000048583.17|insulin-like growth factor 2
mm39_v1_chr11_+_59839032_59839090	1.72972	Gli3_Zic1	ENSMUST00000081980.7|Med9|ENSMUSG00000061650.7|mediator complex subunit 9
mm39_v1_chr8_+_107662352_107662410	1.72922	Gli3_Zic1	ENSMUST00000212524.2|Sntb2|ENSMUSG00000041308.7|syntrophin, basic 2	ENSMUST00000047425.5|Sntb2|ENSMUSG00000041308.7|syntrophin, basic 2
mm39_v1_chrX_+_118836893_118836922	1.72751	Gli3_Zic1	ENSMUST00000040961.3|Pabpc5|ENSMUSG00000034732.5|poly(A) binding protein, cytoplasmic 5	ENSMUST00000113366.2|Pabpc5|ENSMUSG00000034732.5|poly(A) binding protein, cytoplasmic 5
mm39_v1_chr6_-_41613322_41613343	1.72154	Gli3_Zic1	ENSMUST00000031902.7|Trpv6|ENSMUSG00000029868.15|transient receptor potential cation channel, subfamily V, member 6
mm39_v1_chr16_-_84970580_84970606	1.72077	Gli3_Zic1	ENSMUST00000227737.2|App|ENSMUSG00000022892.12|amyloid beta (A4) precursor protein	ENSMUST00000226801.2|App|ENSMUSG00000022892.12|amyloid beta (A4) precursor protein
mm39_v1_chr8_+_23629173_23629293	1.72056	Gli3_Zic1	ENSMUST00000174435.2|Ank1|ENSMUSG00000031543.19|ankyrin 1, erythroid
mm39_v1_chr17_-_66079629_66079644	1.71984	Gli3_Zic1	ENSMUST00000233258.2|Rab31|ENSMUSG00000056515.10|RAB31, member RAS oncogene family
mm39_v1_chr10_+_87357816_87357889	1.71162	Gli3_Zic1	ENSMUST00000218573.2|Pah|ENSMUSG00000020051.18|phenylalanine hydroxylase
mm39_v1_chr18_-_39062514_39062532	1.69955	Gli3_Zic1	ENSMUST00000235922.2|Fgf1|ENSMUSG00000036585.17|fibroblast growth factor 1
mm39_v1_chr10_+_87357782_87357799	1.69695	Gli3_Zic1	ENSMUST00000219813.2|Pah|ENSMUSG00000020051.18|phenylalanine hydroxylase
mm39_v1_chr10_+_69370038_69370052	1.69249	Gli3_Zic1	ENSMUST00000182439.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial	ENSMUST00000092434.12|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial	ENSMUST00000047061.13|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial	ENSMUST00000092432.12|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial	ENSMUST00000092431.12|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial	ENSMUST00000054167.15|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial
mm39_v1_chr17_-_66079681_66079747	1.6658	Gli3_Zic1	ENSMUST00000070673.9|Rab31|ENSMUSG00000056515.10|RAB31, member RAS oncogene family
mm39_v1_chr1_-_63769465_63769500	1.66536	Gli3_Zic1	ENSMUST00000114094.3|Mdh1b|ENSMUSG00000025963.6|malate dehydrogenase 1B, NAD (soluble)
mm39_v1_chr9_-_58065800_58065844	1.66237	Gli3_Zic1	ENSMUST00000168864.4|Islr|ENSMUSG00000037206.16|immunoglobulin superfamily containing leucine-rich repeat
mm39_v1_chr2_-_181234526_181234596	1.64923	Gli3_Zic1	ENSMUST00000108789.9|Zfp512b|ENSMUSG00000000823.17|zinc finger protein 512B	ENSMUST00000153998.2|Zfp512b|ENSMUSG00000000823.17|zinc finger protein 512B
mm39_v1_chr1_+_65350416_65350416	1.64054	Gli3_Zic1	ENSMUST00000027083.7|Pth2r|ENSMUSG00000025946.14|parathyroid hormone 2 receptor
mm39_v1_chr8_+_23629046_23629077	1.63266	Gli3_Zic1	ENSMUST00000121075.8|Ank1|ENSMUSG00000031543.19|ankyrin 1, erythroid
mm39_v1_chr8_-_96161466_96161497	1.63137	Gli3_Zic1	ENSMUST00000213086.2|Cfap20|ENSMUSG00000031796.8|cilia and flagella associated protein 20	ENSMUST00000034249.8|Cfap20|ENSMUSG00000031796.8|cilia and flagella associated protein 20
mm39_v1_chr1_+_131755715_131755757	1.62504	Gli3_Zic1	ENSMUST00000086559.7|Slc41a1|ENSMUSG00000013275.10|solute carrier family 41, member 1
mm39_v1_chr1_+_87522267_87522278	1.60757	Gli3_Zic1	ENSMUST00000165109.2|Neu2|ENSMUSG00000079434.9|neuraminidase 2	ENSMUST00000070898.6|Neu2|ENSMUSG00000079434.9|neuraminidase 2
mm39_v1_chr14_+_52222283_52222428	1.55764	Gli3_Zic1	ENSMUST00000093813.12|Arhgef40|ENSMUSG00000004562.17|Rho guanine nucleotide exchange factor (GEF) 40	ENSMUST00000100639.11|Arhgef40|ENSMUSG00000004562.17|Rho guanine nucleotide exchange factor (GEF) 40	ENSMUST00000182909.8|Arhgef40|ENSMUSG00000004562.17|Rho guanine nucleotide exchange factor (GEF) 40	ENSMUST00000182760.8|Arhgef40|ENSMUSG00000004562.17|Rho guanine nucleotide exchange factor (GEF) 40	ENSMUST00000182061.8|Arhgef40|ENSMUSG00000004562.17|Rho guanine nucleotide exchange factor (GEF) 40	ENSMUST00000182193.2|Arhgef40|ENSMUSG00000004562.17|Rho guanine nucleotide exchange factor (GEF) 40
mm39_v1_chr18_+_65022035_65022105	1.55727	Gli3_Zic1	ENSMUST00000224385.3|Nedd4l|ENSMUSG00000024589.19|neural precursor cell expressed, developmentally down-regulated gene 4-like	ENSMUST00000163516.9|Nedd4l|ENSMUSG00000024589.19|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm39_v1_chr8_+_70953766_70953826	1.54012	Gli3_Zic1	ENSMUST00000127983.2|Crlf1|ENSMUSG00000007888.16|cytokine receptor-like factor 1
mm39_v1_chr2_+_36958319_36958319	1.52834	Gli3_Zic1	ENSMUST00000120704.2|Olfr360|ENSMUSG00000083361.5|olfactory receptor 360
mm39_v1_chr7_+_65343156_65343272	1.52802	Gli3_Zic1	ENSMUST00000032726.14|Tm2d3|ENSMUSG00000078681.11|TM2 domain containing 3	ENSMUST00000107495.5|Tm2d3|ENSMUSG00000078681.11|TM2 domain containing 3	ENSMUST00000143508.3|Tm2d3|ENSMUSG00000078681.11|TM2 domain containing 3	ENSMUST00000129166.3|Tm2d3|ENSMUSG00000078681.11|TM2 domain containing 3	ENSMUST00000206517.2|Tm2d3|ENSMUSG00000078681.11|TM2 domain containing 3	ENSMUST00000206837.2|Tm2d3|ENSMUSG00000078681.11|TM2 domain containing 3	ENSMUST00000206628.2|Tm2d3|ENSMUSG00000078681.11|TM2 domain containing 3	ENSMUST00000206361.2|Tm2d3|ENSMUSG00000078681.11|TM2 domain containing 3
mm39_v1_chr7_-_27749453_27749526	1.51456	Gli3_Zic1	ENSMUST00000140053.3|Psmc4|ENSMUSG00000030603.17|proteasome (prosome, macropain) 26S subunit, ATPase, 4	ENSMUST00000032824.10|Psmc4|ENSMUSG00000030603.17|proteasome (prosome, macropain) 26S subunit, ATPase, 4
mm39_v1_chr16_+_22926162_22926229	1.49135	Gli3_Zic1	ENSMUST00000023599.13|Eif4a2|ENSMUSG00000022884.17|eukaryotic translation initiation factor 4A2	ENSMUST00000168891.8|Eif4a2|ENSMUSG00000022884.17|eukaryotic translation initiation factor 4A2
mm39_v1_chr1_-_153061758_153061802	1.4877	Gli3_Zic1	ENSMUST00000185356.7|Lamc2|ENSMUSG00000026479.14|laminin, gamma 2
mm39_v1_chr2_+_31462780_31462841	1.48187	Gli3_Zic1	ENSMUST00000137889.7|Fubp3|ENSMUSG00000026843.16|far upstream element (FUSE) binding protein 3	ENSMUST00000194386.6|Fubp3|ENSMUSG00000026843.16|far upstream element (FUSE) binding protein 3	ENSMUST00000055244.13|Fubp3|ENSMUSG00000026843.16|far upstream element (FUSE) binding protein 3
mm39_v1_chr14_+_33662976_33663011	1.47835	Gli3_Zic1	ENSMUST00000100720.2|Gdf2|ENSMUSG00000072625.2|growth differentiation factor 2
mm39_v1_chr2_+_129642371_129642493	1.47792	Gli3_Zic1	ENSMUST00000165413.9|Stk35|ENSMUSG00000037885.19|serine/threonine kinase 35	ENSMUST00000166282.3|Stk35|ENSMUSG00000037885.19|serine/threonine kinase 35
mm39_v1_chr11_-_59727752_59727761	1.47732	Gli3_Zic1	ENSMUST00000156837.2|Cops3|ENSMUSG00000019373.12|COP9 signalosome subunit 3
mm39_v1_chr10_+_80085275_80085306	1.46424	Gli3_Zic1	ENSMUST00000020361.7|Ndufs7|ENSMUSG00000020153.15|NADH:ubiquinone oxidoreductase core subunit S7
mm39_v1_chr1_+_166828982_166828999	1.45245	Gli3_Zic1	ENSMUST00000165874.8|Fam78b|ENSMUSG00000060568.15|family with sequence similarity 78, member B	ENSMUST00000190081.7|Fam78b|ENSMUSG00000060568.15|family with sequence similarity 78, member B
mm39_v1_chr15_-_99670751_99670786	1.44771	Gli3_Zic1	ENSMUST00000175876.8|Cers5|ENSMUSG00000023021.16|ceramide synthase 5
mm39_v1_chr5_-_32903615_32903657	1.41205	Gli3_Zic1	ENSMUST00000120591.8|Pisd|ENSMUSG00000023452.20|phosphatidylserine decarboxylase
mm39_v1_chr12_+_24880878_24880913	1.37683	Gli3_Zic1	ENSMUST00000222198.2|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2
mm39_v1_chr15_+_25984445_25984459	1.34254	Gli3_Zic1	ENSMUST00000061875.8|Zfp622|ENSMUSG00000052253.7|zinc finger protein 622
mm39_v1_chr7_-_114235506_114235592	1.33744	Gli3_Zic1	ENSMUST00000205714.2|Calca|ENSMUSG00000030669.14|calcitonin/calcitonin-related polypeptide, alpha	ENSMUST00000206853.2|Calca|ENSMUSG00000030669.14|calcitonin/calcitonin-related polypeptide, alpha	ENSMUST00000205933.2|Calca|ENSMUSG00000030669.14|calcitonin/calcitonin-related polypeptide, alpha	ENSMUST00000206156.2|Calca|ENSMUSG00000030669.14|calcitonin/calcitonin-related polypeptide, alpha	ENSMUST00000032907.9|Calca|ENSMUSG00000030669.14|calcitonin/calcitonin-related polypeptide, alpha	ENSMUST00000032906.11|Calca|ENSMUSG00000030669.14|calcitonin/calcitonin-related polypeptide, alpha
mm39_v1_chr4_+_48045143_48045160	1.33481	Gli3_Zic1	ENSMUST00000030025.10|Nr4a3|ENSMUSG00000028341.10|nuclear receptor subfamily 4, group A, member 3
mm39_v1_chr2_-_160714904_160714929	1.33353	Gli3_Zic1	ENSMUST00000109460.8|Zhx3|ENSMUSG00000035877.18|zinc fingers and homeoboxes 3	ENSMUST00000127201.2|Zhx3|ENSMUSG00000035877.18|zinc fingers and homeoboxes 3
mm39_v1_chr12_+_33197692_33197715	1.32693	Gli3_Zic1	ENSMUST00000077456.13|Atxn7l1|ENSMUSG00000020564.18|ataxin 7-like 1	ENSMUST00000110824.9|Atxn7l1|ENSMUSG00000020564.18|ataxin 7-like 1
mm39_v1_chr2_-_77000878_77000933	1.31224	Gli3_Zic1	ENSMUST00000111833.3|Ccdc141|ENSMUSG00000044033.17|coiled-coil domain containing 141
mm39_v1_chr3_+_105811712_105811743	1.3089	Gli3_Zic1	ENSMUST00000000574.3|Adora3|ENSMUSG00000000562.6|adenosine A3 receptor
mm39_v1_chr7_-_126483851_126483901	1.28214	Gli3_Zic1	ENSMUST00000071268.11|Taok2|ENSMUSG00000059981.13|TAO kinase 2	ENSMUST00000117394.2|Taok2|ENSMUSG00000059981.13|TAO kinase 2
mm39_v1_chr8_-_106692668_106692755	1.26301	Gli3_Zic1	ENSMUST00000116429.9|Slc12a4|ENSMUSG00000017765.18|solute carrier family 12, member 4	ENSMUST00000034370.17|Slc12a4|ENSMUSG00000017765.18|solute carrier family 12, member 4
mm39_v1_chr7_+_46401214_46401265	1.24604	Gli3_Zic1	ENSMUST00000210769.2|Saa2|ENSMUSG00000057465.6|serum amyloid A 2	ENSMUST00000210272.2|Saa2|ENSMUSG00000057465.6|serum amyloid A 2	ENSMUST00000075982.4|Saa2|ENSMUSG00000057465.6|serum amyloid A 2
mm39_v1_chr15_-_99670276_99670343	1.22841	Gli3_Zic1	ENSMUST00000109035.11|Cers5|ENSMUSG00000023021.16|ceramide synthase 5
mm39_v1_chr10_-_78005560_78005627	1.20693	Gli3_Zic1	ENSMUST00000219120.2|Gatd3a|ENSMUSG00000053329.8|glutamine amidotransferase like class 1 domain containing 3A	ENSMUST00000001242.9|Gatd3a|ENSMUSG00000053329.8|glutamine amidotransferase like class 1 domain containing 3A
mm39_v1_chr17_+_15261896_15261935	1.20159	Gli3_Zic1	ENSMUST00000226599.2|Ermard|ENSMUSG00000036552.20|ER membrane associated RNA degradation	ENSMUST00000228518.2|Ermard|ENSMUSG00000036552.20|ER membrane associated RNA degradation	ENSMUST00000226213.2|Ermard|ENSMUSG00000036552.20|ER membrane associated RNA degradation
mm39_v1_chr12_+_3415143_3415207	1.17367	Gli3_Zic1	ENSMUST00000020999.7|Kif3c|ENSMUSG00000020668.11|kinesin family member 3C
mm39_v1_chr2_-_35994072_35994085	1.15304	Gli3_Zic1	ENSMUST00000112961.10|Lhx6|ENSMUSG00000026890.20|LIM homeobox protein 6	ENSMUST00000112966.10|Lhx6|ENSMUSG00000026890.20|LIM homeobox protein 6
mm39_v1_chr11_+_115921129_115921215	1.1515	Gli3_Zic1	ENSMUST00000021116.12|Unk|ENSMUSG00000020770.14|unkempt family zinc finger	ENSMUST00000106452.2|Unk|ENSMUSG00000020770.14|unkempt family zinc finger
mm39_v1_chr4_-_154983533_154983592	1.14845	Gli3_Zic1	ENSMUST00000030935.10|Prxl2b|ENSMUSG00000029059.10|peroxiredoxin like 2B	ENSMUST00000132281.2|Prxl2b|ENSMUSG00000029059.10|peroxiredoxin like 2B
mm39_v1_chr4_+_131649001_131649082	1.14832	Gli3_Zic1	ENSMUST00000094666.4|Tmem200b|ENSMUSG00000070720.5|transmembrane protein 200B
mm39_v1_chr6_-_40521911_40521911	1.14745	Gli3_Zic1	ENSMUST00000089490.3|Olfr461|ENSMUSG00000068259.5|olfactory receptor 461
mm39_v1_chr1_+_63769772_63769816	1.14046	Gli3_Zic1	ENSMUST00000027103.7|Fastkd2|ENSMUSG00000025962.16|FAST kinase domains 2
mm39_v1_chr3_+_135144202_135144241	1.13906	Gli3_Zic1	ENSMUST00000166033.6|Ube2d3|ENSMUSG00000078578.10|ubiquitin-conjugating enzyme E2D 3
mm39_v1_chr10_+_69369854_69369901	1.12673	Gli3_Zic1	ENSMUST00000182557.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial
mm39_v1_chr8_-_121394860_121394873	1.11586	Gli3_Zic1	ENSMUST00000034277.14|Emc8|ENSMUSG00000031819.14|ER membrane protein complex subunit 8
mm39_v1_chr2_-_160714473_160714542	1.11419	Gli3_Zic1	ENSMUST00000103111.9|Zhx3|ENSMUSG00000035877.18|zinc fingers and homeoboxes 3
mm39_v1_chr2_+_181138958_181139009	1.11269	Gli3_Zic1	ENSMUST00000149163.8|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2	ENSMUST00000000844.15|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2	ENSMUST00000184849.8|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2	ENSMUST00000108800.8|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2	ENSMUST00000069712.9|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2
mm39_v1_chr6_+_48372520_48372580	1.11031	Gli3_Zic1	ENSMUST00000114571.8|Krba1|ENSMUSG00000042810.15|KRAB-A domain containing 1	ENSMUST00000031815.12|Krba1|ENSMUSG00000042810.15|KRAB-A domain containing 1	ENSMUST00000203371.3|Krba1|ENSMUSG00000042810.15|KRAB-A domain containing 1
mm39_v1_chr3_+_105359641_105359688	1.10449	Gli3_Zic1	ENSMUST00000098761.10|Kcnd3|ENSMUSG00000040896.17|potassium voltage-gated channel, Shal-related family, member 3
mm39_v1_chr18_-_34139972_34140042	1.09899	Gli3_Zic1	ENSMUST00000025234.7|Epb41l4a|ENSMUSG00000024376.8|erythrocyte membrane protein band 4.1 like 4a
mm39_v1_chr3_-_104419128_104419250	1.09641	Gli3_Zic1	ENSMUST00000199070.5|Lrig2|ENSMUSG00000032913.14|leucine-rich repeats and immunoglobulin-like domains 2	ENSMUST00000046316.11|Lrig2|ENSMUSG00000032913.14|leucine-rich repeats and immunoglobulin-like domains 2	ENSMUST00000198332.2|Lrig2|ENSMUSG00000032913.14|leucine-rich repeats and immunoglobulin-like domains 2
mm39_v1_chr2_-_91762033_91762069	1.0847	Gli3_Zic1	ENSMUST00000111309.8|Mdk|ENSMUSG00000027239.15|midkine	ENSMUST00000090602.6|Mdk|ENSMUSG00000027239.15|midkine
mm39_v1_chr16_+_20335825_20335881	1.07677	Gli3_Zic1	ENSMUST00000171774.2|Dvl3|ENSMUSG00000003233.13|dishevelled segment polarity protein 3
mm39_v1_chr7_-_6491875_6491875	1.06632	Gli3_Zic1	ENSMUST00000036357.7|Olfr1347|ENSMUSG00000034583.10|olfactory receptor 1347	ENSMUST00000220413.2|Olfr1347|ENSMUSG00000034583.10|olfactory receptor 1347
mm39_v1_chr9_+_103940879_103940935	1.0638	Gli3_Zic1	ENSMUST00000047799.13|Acad11|ENSMUSG00000090150.11|acyl-Coenzyme A dehydrogenase family, member 11	ENSMUST00000189998.3|Acad11|ENSMUSG00000090150.11|acyl-Coenzyme A dehydrogenase family, member 11
mm39_v1_chr2_-_160714749_160714863	1.06117	Gli3_Zic1	ENSMUST00000176141.8|Zhx3|ENSMUSG00000035877.18|zinc fingers and homeoboxes 3
mm39_v1_chr5_+_142678212_142678267	1.05976	Gli3_Zic1	ENSMUST00000198728.5|Slc29a4|ENSMUSG00000050822.12|solute carrier family 29 (nucleoside transporters), member 4
mm39_v1_chr16_+_20335712_20335823	1.05433	Gli3_Zic1	ENSMUST00000003318.13|Dvl3|ENSMUSG00000003233.13|dishevelled segment polarity protein 3	ENSMUST00000171572.9|Dvl3|ENSMUSG00000003233.13|dishevelled segment polarity protein 3
mm39_v1_chr12_-_98225676_98225718	1.05219	Gli3_Zic1	ENSMUST00000021390.9|Galc|ENSMUSG00000021003.11|galactosylceramidase
mm39_v1_chr1_-_153775944_153775957	1.04887	Gli3_Zic1	ENSMUST00000123490.2|Teddm2|ENSMUSG00000045968.8|transmembrane epididymal family member 2
mm39_v1_chrX_+_160500051_160500068	1.03209	Gli3_Zic1	ENSMUST00000112338.2|Rai2|ENSMUSG00000043518.8|retinoic acid induced 2
mm39_v1_chr9_+_77824646_77824668	1.01507	Gli3_Zic1	ENSMUST00000034904.14|Elovl5|ENSMUSG00000032349.14|ELOVL family member 5, elongation of long chain fatty acids (yeast)
mm39_v1_chr6_+_48372586_48372623	1.01406	Gli3_Zic1	ENSMUST00000077093.7|Krba1|ENSMUSG00000042810.15|KRAB-A domain containing 1
mm39_v1_chr11_-_120440519_120440554	1.00538	Gli3_Zic1	ENSMUST00000034913.5|Mcrip1|ENSMUSG00000061111.9|MAPK regulated corepressor interacting protein 1
mm39_v1_chr10_+_22034460_22034491	1.00396	Gli3_Zic1	ENSMUST00000181645.8|Raet1e|ENSMUSG00000053219.16|retinoic acid early transcript 1E	ENSMUST00000105522.9|H60b|ENSMUSG00000075297.11|histocompatibility 60b
mm39_v1_chr13_-_9814979_9815031	0.99825	Gli3_Zic1	ENSMUST00000110634.8|Zmynd11|ENSMUSG00000021156.18|zinc finger, MYND domain containing 11
mm39_v1_chr7_-_126074222_126074251	0.99706	Gli3_Zic1	ENSMUST00000205497.2|Sh2b1|ENSMUSG00000030733.11|SH2B adaptor protein 1
mm39_v1_chr7_-_78780743_78780766	0.993052	Gli3_Zic1	ENSMUST00000205782.2|Hapln3|ENSMUSG00000030606.9|hyaluronan and proteoglycan link protein 3	ENSMUST00000206092.2|Hapln3|ENSMUSG00000030606.9|hyaluronan and proteoglycan link protein 3
mm39_v1_chr8_+_93687561_93687672	0.986992	Gli3_Zic1	ENSMUST00000072939.8|Slc6a2|ENSMUSG00000055368.15|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2
mm39_v1_chr6_+_21986445_21986595	0.982851	Gli3_Zic1	ENSMUST00000115382.8|Cped1|ENSMUSG00000062980.16|cadherin-like and PC-esterase domain containing 1
mm39_v1_chr15_-_84739292_84739327	0.979991	Gli3_Zic1	ENSMUST00000016768.12|Phf21b|ENSMUSG00000016624.16|PHD finger protein 21B
mm39_v1_chr6_+_21985902_21985971	0.965687	Gli3_Zic1	ENSMUST00000115383.9|Cped1|ENSMUSG00000062980.16|cadherin-like and PC-esterase domain containing 1
mm39_v1_chr15_-_103218876_103219039	0.952067	Gli3_Zic1	ENSMUST00000079824.6|Gpr84|ENSMUSG00000063234.6|G protein-coupled receptor 84
mm39_v1_chr19_+_5524933_5524966	0.947402	Gli3_Zic1	ENSMUST00000236518.2|Efemp2|ENSMUSG00000024909.16|epidermal growth factor-containing fibulin-like extracellular matrix protein 2
mm39_v1_chr2_+_155617251_155617313	0.91661	Gli3_Zic1	ENSMUST00000029141.6|Mmp24|ENSMUSG00000027612.8|matrix metallopeptidase 24
mm39_v1_chr19_-_46321218_46321231	0.91599	Gli3_Zic1	ENSMUST00000238062.2|Cuedc2|ENSMUSG00000036748.17|CUE domain containing 2
mm39_v1_chr7_+_127368981_127369001	0.912584	Gli3_Zic1	ENSMUST00000118865.8|Orai3|ENSMUSG00000043964.15|ORAI calcium release-activated calcium modulator 3	ENSMUST00000061587.13|Orai3|ENSMUSG00000043964.15|ORAI calcium release-activated calcium modulator 3	ENSMUST00000121504.2|Orai3|ENSMUSG00000043964.15|ORAI calcium release-activated calcium modulator 3
mm39_v1_chr17_-_37481536_37481536	0.912067	Gli3_Zic1	ENSMUST00000174673.3|Olfr753-ps1|ENSMUSG00000090556.6|olfactory receptor 753, pseudogene 1
mm39_v1_chr10_-_127177729_127177843	0.904054	Gli3_Zic1	ENSMUST00000026474.5|Gli1|ENSMUSG00000025407.8|GLI-Kruppel family member GLI1	ENSMUST00000219671.2|Gli1|ENSMUSG00000025407.8|GLI-Kruppel family member GLI1
mm39_v1_chr6_+_48372771_48372807	0.901185	Gli3_Zic1	ENSMUST00000114572.9|Krba1|ENSMUSG00000042810.15|KRAB-A domain containing 1
mm39_v1_chr11_+_67586140_67586152	0.892885	Gli3_Zic1	ENSMUST00000021290.2|Rcvrn|ENSMUSG00000020907.2|recoverin
mm39_v1_chr17_+_35354148_35354159	0.891437	Gli3_Zic1	ENSMUST00000166426.9|Bag6|ENSMUSG00000024392.18|BCL2-associated athanogene 6	ENSMUST00000025250.14|Bag6|ENSMUSG00000024392.18|BCL2-associated athanogene 6
mm39_v1_chr19_+_55304703_55304799	0.888865	Gli3_Zic1	ENSMUST00000225529.2|Vti1a|ENSMUSG00000024983.11|vesicle transport through interaction with t-SNAREs 1A	ENSMUST00000223690.2|Vti1a|ENSMUSG00000024983.11|vesicle transport through interaction with t-SNAREs 1A	ENSMUST00000095950.3|Vti1a|ENSMUSG00000024983.11|vesicle transport through interaction with t-SNAREs 1A
mm39_v1_chr7_+_99184645_99184709	0.885989	Gli3_Zic1	ENSMUST00000098266.9|Arrb1|ENSMUSG00000018909.16|arrestin, beta 1	ENSMUST00000179755.8|Arrb1|ENSMUSG00000018909.16|arrestin, beta 1
mm39_v1_chr7_+_24967094_24967148	0.872288	Gli3_Zic1	ENSMUST00000169266.8|Cic|ENSMUSG00000005442.14|capicua transcriptional repressor
mm39_v1_chr4_+_116953218_116953280	0.870648	Gli3_Zic1	ENSMUST00000030443.12|Ptch2|ENSMUSG00000028681.12|patched 2
mm39_v1_chr11_-_69260203_69260242	0.862207	Gli3_Zic1	ENSMUST00000092971.13|Chd3|ENSMUSG00000018474.19|chromodomain helicase DNA binding protein 3	ENSMUST00000108661.8|Chd3|ENSMUSG00000018474.19|chromodomain helicase DNA binding protein 3
mm39_v1_chr2_-_59778560_59778594	0.858537	Gli3_Zic1	ENSMUST00000153136.2|Baz2b|ENSMUSG00000026987.17|bromodomain adjacent to zinc finger domain, 2B
mm39_v1_chr15_-_98851423_98851441	0.847846	Gli3_Zic1	ENSMUST00000134214.3|Gm49450|ENSMUSG00000116358.2|predicted gene, 49450
mm39_v1_chr10_-_128640232_128640274	0.842788	Gli3_Zic1	ENSMUST00000051011.14|Tmem198b|ENSMUSG00000047090.14|transmembrane protein 198b
mm39_v1_chr11_-_40646090_40646138	0.841327	Gli3_Zic1	ENSMUST00000020576.8|Ccng1|ENSMUSG00000020326.8|cyclin G1
mm39_v1_chr13_+_6598185_6598226	0.833006	Gli3_Zic1	ENSMUST00000021611.10|Pitrm1|ENSMUSG00000021193.11|pitrilysin metallepetidase 1	ENSMUST00000222485.2|Pitrm1|ENSMUSG00000021193.11|pitrilysin metallepetidase 1
mm39_v1_chr12_-_12990584_12990617	0.82659	Gli3_Zic1	ENSMUST00000130990.2|Mycn|ENSMUSG00000037169.16|v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived
mm39_v1_chr11_+_97253221_97253377	0.816452	Gli3_Zic1	ENSMUST00000238729.2|Socs7|ENSMUSG00000038485.7|suppressor of cytokine signaling 7	ENSMUST00000045540.4|Socs7|ENSMUSG00000038485.7|suppressor of cytokine signaling 7
mm39_v1_chrX_-_111315519_111315519	0.802902	Gli3_Zic1	ENSMUST00000124335.8|Satl1|ENSMUSG00000025527.10|spermidine/spermine N1-acetyl transferase-like 1
mm39_v1_chr2_+_181162326_181162364	0.801509	Gli3_Zic1	ENSMUST00000108797.8|Dnajc5|ENSMUSG00000000826.17|DnaJ heat shock protein family (Hsp40) member C5
mm39_v1_chr1_-_89942299_89942388	0.796129	Gli3_Zic1	ENSMUST00000086882.8|Asb18|ENSMUSG00000067081.14|ankyrin repeat and SOCS box-containing 18	ENSMUST00000097656.10|Asb18|ENSMUSG00000067081.14|ankyrin repeat and SOCS box-containing 18
mm39_v1_chr7_-_19398930_19398958	0.779165	Gli3_Zic1	ENSMUST00000055242.11|Clptm1|ENSMUSG00000002981.11|cleft lip and palate associated transmembrane protein 1
mm39_v1_chr13_+_74498430_74498487	0.778648	Gli3_Zic1	ENSMUST00000160021.8|Ccdc127|ENSMUSG00000021578.18|coiled-coil domain containing 127	ENSMUST00000162672.8|Ccdc127|ENSMUSG00000021578.18|coiled-coil domain containing 127	ENSMUST00000162376.2|Ccdc127|ENSMUSG00000021578.18|coiled-coil domain containing 127
mm39_v1_chr3_-_100591906_100591942	0.715971	Gli3_Zic1	ENSMUST00000130066.2|Man1a2|ENSMUSG00000008763.17|mannosidase, alpha, class 1A, member 2
mm39_v1_chr7_-_139696308_139696389	0.703348	Gli3_Zic1	ENSMUST00000026538.13|Echs1|ENSMUSG00000025465.14|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial
mm39_v1_chr17_+_35354172_35354221	0.681061	Gli3_Zic1	ENSMUST00000172571.8|Bag6|ENSMUSG00000024392.18|BCL2-associated athanogene 6	ENSMUST00000173491.8|Bag6|ENSMUSG00000024392.18|BCL2-associated athanogene 6
mm39_v1_chr8_+_86567600_86567657	0.674896	Gli3_Zic1	ENSMUST00000053771.14|Phkb|ENSMUSG00000036879.16|phosphorylase kinase beta	ENSMUST00000161850.8|Phkb|ENSMUSG00000036879.16|phosphorylase kinase beta
mm39_v1_chr9_-_99450948_99450961	0.671856	Gli3_Zic1	ENSMUST00000035043.12|Armc8|ENSMUSG00000032468.12|armadillo repeat containing 8
mm39_v1_chr16_+_32462665_32462744	0.67181	Gli3_Zic1	ENSMUST00000145627.8|Tnk2|ENSMUSG00000022791.20|tyrosine kinase, non-receptor, 2
mm39_v1_chr8_+_3543131_3543212	0.659005	Gli3_Zic1	ENSMUST00000061508.8|Zfp358|ENSMUSG00000047264.9|zinc finger protein 358	ENSMUST00000207318.2|Zfp358|ENSMUSG00000047264.9|zinc finger protein 358
mm39_v1_chr4_+_154921916_154921916	0.656195	Gli3_Zic1	ENSMUST00000207854.2|Ttc34|ENSMUSG00000046637.4|tetratricopeptide repeat domain 34
mm39_v1_chr5_+_3853160_3853193	0.652093	Gli3_Zic1	ENSMUST00000080085.9|Krit1|ENSMUSG00000000600.16|KRIT1, ankyrin repeat containing	ENSMUST00000200386.5|Krit1|ENSMUSG00000000600.16|KRIT1, ankyrin repeat containing
mm39_v1_chr8_-_70340337_70340337	0.649948	Gli3_Zic1	ENSMUST00000057831.8|Cilp2|ENSMUSG00000044006.9|cartilage intermediate layer protein 2
mm39_v1_chr2_-_91762119_91762141	0.635404	Gli3_Zic1	ENSMUST00000069423.13|Mdk|ENSMUSG00000027239.15|midkine
mm39_v1_chr16_+_16887991_16888079	0.631469	Gli3_Zic1	ENSMUST00000232258.2|Ypel1|ENSMUSG00000022773.20|yippee like 1
mm39_v1_chr9_-_99599312_99599327	0.631048	Gli3_Zic1	ENSMUST00000112882.9|Cldn18|ENSMUSG00000032473.14|claudin 18	ENSMUST00000131922.2|Cldn18|ENSMUSG00000032473.14|claudin 18
mm39_v1_chr16_-_30152708_30152708	0.629309	Gli3_Zic1	ENSMUST00000229503.2|Atp13a3|ENSMUSG00000022533.15|ATPase type 13A3
mm39_v1_chr15_+_103411461_103411473	0.62124	Gli3_Zic1	ENSMUST00000023132.5|Pde1b|ENSMUSG00000022489.7|phosphodiesterase 1B, Ca2+-calmodulin dependent
mm39_v1_chr3_+_135144304_135144335	0.613871	Gli3_Zic1	ENSMUST00000198685.5|Ube2d3|ENSMUSG00000078578.10|ubiquitin-conjugating enzyme E2D 3	ENSMUST00000197859.5|Ube2d3|ENSMUSG00000078578.10|ubiquitin-conjugating enzyme E2D 3
mm39_v1_chr5_+_31454939_31454961	0.59161	Gli3_Zic1	ENSMUST00000201675.3|Gckr|ENSMUSG00000059434.10|glucokinase regulatory protein
mm39_v1_chr11_-_102446947_102447025	0.58656	Gli3_Zic1	ENSMUST00000143842.2|Gpatch8|ENSMUSG00000034621.15|G patch domain containing 8
mm39_v1_chr1_+_33947250_33947306	0.579163	Gli3_Zic1	ENSMUST00000183034.5|Dst|ENSMUSG00000026131.21|dystonin
mm39_v1_chr4_+_154954042_154954093	0.564268	Gli3_Zic1	ENSMUST00000079269.14|Mmel1|ENSMUSG00000058183.15|membrane metallo-endopeptidase-like 1	ENSMUST00000163732.8|Mmel1|ENSMUSG00000058183.15|membrane metallo-endopeptidase-like 1	ENSMUST00000080559.13|Mmel1|ENSMUSG00000058183.15|membrane metallo-endopeptidase-like 1
mm39_v1_chr15_-_99670479_99670490	0.561544	Gli3_Zic1	ENSMUST00000023762.13|Cers5|ENSMUSG00000023021.16|ceramide synthase 5
mm39_v1_chr2_+_58991352_58991398	0.560087	Gli3_Zic1	ENSMUST00000037903.15|Pkp4|ENSMUSG00000026991.21|plakophilin 4
mm39_v1_chr7_-_106390206_106390206	0.559703	Gli3_Zic1	ENSMUST00000065024.2|Olfr699|ENSMUSG00000096714.3|olfactory receptor 699
mm39_v1_chr4_+_123127349_123127349	0.55268	Gli3_Zic1	ENSMUST00000040821.5|Heyl|ENSMUSG00000032744.5|hairy/enhancer-of-split related with YRPW motif-like
mm39_v1_chr7_-_141926079_141926178	0.545234	Gli3_Zic1	ENSMUST00000059223.15|Ifitm10|ENSMUSG00000045777.15|interferon induced transmembrane protein 10
mm39_v1_chr13_-_63579551_63579570	0.544527	Gli3_Zic1	ENSMUST00000073029.13|Fancc|ENSMUSG00000021461.18|Fanconi anemia, complementation group C
mm39_v1_chr15_+_99290832_99290903	0.544234	Gli3_Zic1	ENSMUST00000160635.8|Tmbim6|ENSMUSG00000023010.16|transmembrane BAX inhibitor motif containing 6	ENSMUST00000161250.8|Tmbim6|ENSMUSG00000023010.16|transmembrane BAX inhibitor motif containing 6	ENSMUST00000229392.2|Tmbim6|ENSMUSG00000023010.16|transmembrane BAX inhibitor motif containing 6	ENSMUST00000161778.8|Tmbim6|ENSMUSG00000023010.16|transmembrane BAX inhibitor motif containing 6
mm39_v1_chr16_+_32462927_32463109	0.543446	Gli3_Zic1	ENSMUST00000124585.2|Tnk2|ENSMUSG00000022791.20|tyrosine kinase, non-receptor, 2
mm39_v1_chr17_+_56633040_56633097	0.538211	Gli3_Zic1	ENSMUST00000139679.8|Kdm4b|ENSMUSG00000024201.13|lysine (K)-specific demethylase 4B	ENSMUST00000025036.11|Kdm4b|ENSMUSG00000024201.13|lysine (K)-specific demethylase 4B	ENSMUST00000086835.12|Kdm4b|ENSMUSG00000024201.13|lysine (K)-specific demethylase 4B
mm39_v1_chr4_-_70453140_70453224	0.532558	Gli3_Zic1	ENSMUST00000107359.9|Megf9|ENSMUSG00000039270.10|multiple EGF-like-domains 9
mm39_v1_chr2_-_125565307_125565457	0.528119	Gli3_Zic1	ENSMUST00000042246.14|Shc4|ENSMUSG00000035109.15|SHC (Src homology 2 domain containing) family, member 4
mm39_v1_chr6_+_86172372_86172404	0.524394	Gli3_Zic1	ENSMUST00000192058.4|Tgfa|ENSMUSG00000029999.15|transforming growth factor alpha
mm39_v1_chr8_-_22615046_22615088	0.514217	Gli3_Zic1	ENSMUST00000209656.2|Nek5|ENSMUSG00000037738.12|NIMA (never in mitosis gene a)-related expressed kinase 5	ENSMUST00000169834.2|Nek5|ENSMUSG00000037738.12|NIMA (never in mitosis gene a)-related expressed kinase 5
mm39_v1_chr1_-_151965876_151965918	0.509507	Gli3_Zic1	ENSMUST00000044581.14|1700025G04Rik|ENSMUSG00000032666.17|RIKEN cDNA 1700025G04 gene
mm39_v1_chr18_-_81029751_81029751	0.504384	Gli3_Zic1	ENSMUST00000238808.2|Sall3|ENSMUSG00000024565.11|spalt like transcription factor 3
mm39_v1_chr8_-_34614187_34614220	0.503742	Gli3_Zic1	ENSMUST00000033910.9|Leprotl1|ENSMUSG00000031513.9|leptin receptor overlapping transcript-like 1
mm39_v1_chr11_-_70120503_70120592	0.473786	Gli3_Zic1	ENSMUST00000153449.2|Bcl6b|ENSMUSG00000000317.12|B cell CLL/lymphoma 6, member B	ENSMUST00000000326.12|Bcl6b|ENSMUSG00000000317.12|B cell CLL/lymphoma 6, member B
mm39_v1_chr17_+_15230438_15230438	0.468604	Gli3_Zic1	ENSMUST00000097395.5|Gm3435|ENSMUSG00000116895.2|predicted gene 3435
mm39_v1_chr10_-_52258170_52258237	0.451733	Gli3_Zic1	ENSMUST00000020008.10|Gopc|ENSMUSG00000019861.16|golgi associated PDZ and coiled-coil motif containing	ENSMUST00000105475.9|Gopc|ENSMUSG00000019861.16|golgi associated PDZ and coiled-coil motif containing
mm39_v1_chr8_+_69333143_69333216	0.44877	Gli3_Zic1	ENSMUST00000015712.15|Lpl|ENSMUSG00000015568.17|lipoprotein lipase
mm39_v1_chrX_-_58612709_58612832	0.446986	Gli3_Zic1	ENSMUST00000124402.2|Fgf13|ENSMUSG00000031137.18|fibroblast growth factor 13
mm39_v1_chr9_-_105372235_105372316	0.445729	Gli3_Zic1	ENSMUST00000176190.8|Atp2c1|ENSMUSG00000032570.18|ATPase, Ca++-sequestering	ENSMUST00000163879.9|Atp2c1|ENSMUSG00000032570.18|ATPase, Ca++-sequestering	ENSMUST00000112558.10|Atp2c1|ENSMUSG00000032570.18|ATPase, Ca++-sequestering	ENSMUST00000176363.9|Atp2c1|ENSMUSG00000032570.18|ATPase, Ca++-sequestering
mm39_v1_chr8_+_120729459_120729480	0.44212	Gli3_Zic1	ENSMUST00000108972.4|Crispld2|ENSMUSG00000031825.17|cysteine-rich secretory protein LCCL domain containing 2
mm39_v1_chr13_+_74498418_74498428	0.437929	Gli3_Zic1	ENSMUST00000022063.14|Ccdc127|ENSMUSG00000021578.18|coiled-coil domain containing 127
mm39_v1_chr11_-_54140462_54140493	0.43511	Gli3_Zic1	ENSMUST00000019060.6|Csf2|ENSMUSG00000018916.6|colony stimulating factor 2 (granulocyte-macrophage)
mm39_v1_chr2_+_181162278_181162324	0.431657	Gli3_Zic1	ENSMUST00000072334.12|Dnajc5|ENSMUSG00000000826.17|DnaJ heat shock protein family (Hsp40) member C5
mm39_v1_chr6_+_90346547_90346633	0.429375	Gli3_Zic1	ENSMUST00000045740.8|Zxdc|ENSMUSG00000034430.17|ZXD family zinc finger C	ENSMUST00000203493.2|Zxdc|ENSMUSG00000034430.17|ZXD family zinc finger C
mm39_v1_chr2_+_174485327_174485327	0.424435	Gli3_Zic1	ENSMUST00000059452.6|Zfp831|ENSMUSG00000050600.6|zinc finger protein 831
mm39_v1_chr15_+_78783867_78783975	0.423364	Gli3_Zic1	ENSMUST00000134703.8|Gm49510|ENSMUSG00000116069.2|predicted gene, 49510	ENSMUST00000061239.14|Sh3bp1|ENSMUSG00000022436.17|SH3-domain binding protein 1	ENSMUST00000109698.9|Sh3bp1|ENSMUSG00000022436.17|SH3-domain binding protein 1
mm39_v1_chr17_+_15230597_15230597	0.42022	Gli3_Zic1	ENSMUST00000232446.2|Gm3435|ENSMUSG00000116895.2|predicted gene 3435
mm39_v1_chr5_-_146900548_146900617	0.410223	Gli3_Zic1	ENSMUST00000125217.2|Mtif3|ENSMUSG00000016510.12|mitochondrial translational initiation factor 3	ENSMUST00000110564.8|Mtif3|ENSMUSG00000016510.12|mitochondrial translational initiation factor 3	ENSMUST00000066675.10|Mtif3|ENSMUSG00000016510.12|mitochondrial translational initiation factor 3	ENSMUST00000016654.9|Mtif3|ENSMUSG00000016510.12|mitochondrial translational initiation factor 3	ENSMUST00000110566.2|Mtif3|ENSMUSG00000016510.12|mitochondrial translational initiation factor 3	ENSMUST00000140526.2|Mtif3|ENSMUSG00000016510.12|mitochondrial translational initiation factor 3
mm39_v1_chr14_+_101967343_101967394	0.407447	Gli3_Zic1	ENSMUST00000100337.10|Lmo7|ENSMUSG00000033060.17|LIM domain only 7
mm39_v1_chr11_+_118324652_118324689	0.403677	Gli3_Zic1	ENSMUST00000106286.3|C1qtnf1|ENSMUSG00000017446.15|C1q and tumor necrosis factor related protein 1
mm39_v1_chr17_+_35354430_35354543	0.399994	Gli3_Zic1	ENSMUST00000173535.8|Bag6|ENSMUSG00000024392.18|BCL2-associated athanogene 6	ENSMUST00000173952.8|Bag6|ENSMUSG00000024392.18|BCL2-associated athanogene 6
mm39_v1_chr7_+_127345909_127345947	0.398973	Gli3_Zic1	ENSMUST00000033081.14|Fbxl19|ENSMUSG00000030811.15|F-box and leucine-rich repeat protein 19
mm39_v1_chr15_-_97742134_97742199	0.397512	Gli3_Zic1	ENSMUST00000119670.8|Hdac7|ENSMUSG00000022475.20|histone deacetylase 7	ENSMUST00000116409.9|Hdac7|ENSMUSG00000022475.20|histone deacetylase 7
mm39_v1_chr19_-_21418215_21418238	0.396925	Gli3_Zic1	ENSMUST00000237823.2|Gda|ENSMUSG00000058624.14|guanine deaminase
mm39_v1_chr5_-_24650164_24650285	0.395229	Gli3_Zic1	ENSMUST00000115043.8|Fastk|ENSMUSG00000028959.15|Fas-activated serine/threonine kinase	ENSMUST00000115041.2|Fastk|ENSMUSG00000028959.15|Fas-activated serine/threonine kinase	ENSMUST00000030800.13|Fastk|ENSMUSG00000028959.15|Fas-activated serine/threonine kinase
mm39_v1_chr18_+_37102969_37102969	0.387525	Gli3_Zic1	ENSMUST00000194544.2|Gm37013|ENSMUSG00000102836.2|predicted gene, 37013
mm39_v1_chr2_-_168072295_168072304	0.38368	Gli3_Zic1	ENSMUST00000154111.8|Dpm1|ENSMUSG00000078919.11|dolichol-phosphate (beta-D) mannosyltransferase 1
mm39_v1_chr9_+_60701749_60701907	0.382474	Gli3_Zic1	ENSMUST00000214354.2|Uaca|ENSMUSG00000034485.11|uveal autoantigen with coiled-coil domains and ankyrin repeats	ENSMUST00000050183.7|Uaca|ENSMUSG00000034485.11|uveal autoantigen with coiled-coil domains and ankyrin repeats	ENSMUST00000217656.2|Uaca|ENSMUSG00000034485.11|uveal autoantigen with coiled-coil domains and ankyrin repeats
mm39_v1_chr19_+_8713156_8713220	0.377711	Gli3_Zic1	ENSMUST00000210512.2|Wdr74|ENSMUSG00000042729.12|WD repeat domain 74	ENSMUST00000049424.11|Wdr74|ENSMUSG00000042729.12|WD repeat domain 74
mm39_v1_chr11_+_70538083_70538120	0.364906	Gli3_Zic1	ENSMUST00000037534.8|Rnf167|ENSMUSG00000040746.16|ring finger protein 167
mm39_v1_chr9_+_118335294_118335357	0.362369	Gli3_Zic1	ENSMUST00000084820.6|Golga4|ENSMUSG00000038708.11|golgi autoantigen, golgin subfamily a, 4
mm39_v1_chr19_+_8779903_8779922	0.359102	Gli3_Zic1	ENSMUST00000172175.3|Zbtb3|ENSMUSG00000071661.8|zinc finger and BTB domain containing 3
mm39_v1_chr9_+_113570580_113570592	0.348988	Gli3_Zic1	ENSMUST00000216817.2|Clasp2|ENSMUSG00000033392.17|CLIP associating protein 2
mm39_v1_chr12_+_59113659_59113670	0.345296	Gli3_Zic1	ENSMUST00000021381.6|Pnn|ENSMUSG00000020994.6|pinin
mm39_v1_chr1_-_133834711_133834752	0.345246	Gli3_Zic1	ENSMUST00000126123.2|Optc|ENSMUSG00000010311.16|opticin
mm39_v1_chr14_+_52804637_52804750	0.343129	Gli3_Zic1	ENSMUST00000196939.2|Trav2|ENSMUSG00000076759.4|T cell receptor alpha variable 2	ENSMUST00000103568.3|Trav2|ENSMUSG00000076759.4|T cell receptor alpha variable 2
mm39_v1_chr17_+_24888704_24888727	0.338422	Gli3_Zic1	ENSMUST00000047179.7|Zfp598|ENSMUSG00000041130.11|zinc finger protein 598
mm39_v1_chr19_-_12147438_12147476	0.337781	Gli3_Zic1	ENSMUST00000207679.3|Olfr1555-ps1|ENSMUSG00000108889.3|olfactory receptor 1555, pseudogene 1	ENSMUST00000219261.2|Olfr1555-ps1|ENSMUSG00000108889.3|olfactory receptor 1555, pseudogene 1
mm39_v1_chr6_-_116084810_116084841	0.337236	Gli3_Zic1	ENSMUST00000204353.3|Tmcc1|ENSMUSG00000030126.18|transmembrane and coiled coil domains 1
mm39_v1_chr5_-_108280350_108280404	0.327309	Gli3_Zic1	ENSMUST00000119784.2|Tmed5|ENSMUSG00000063406.12|transmembrane p24 trafficking protein 5	ENSMUST00000117759.2|Tmed5|ENSMUSG00000063406.12|transmembrane p24 trafficking protein 5
mm39_v1_chr8_+_23629080_23629121	0.326734	Gli3_Zic1	ENSMUST00000033947.15|Ank1|ENSMUSG00000031543.19|ankyrin 1, erythroid
mm39_v1_chr13_+_109822527_109822690	0.324216	Gli3_Zic1	ENSMUST00000074103.12|Pde4d|ENSMUSG00000021699.18|phosphodiesterase 4D, cAMP specific
mm39_v1_chr15_-_97742045_97742130	0.320641	Gli3_Zic1	ENSMUST00000120683.8|Hdac7|ENSMUSG00000022475.20|histone deacetylase 7
mm39_v1_chr1_-_74323536_74323595	0.318582	Gli3_Zic1	ENSMUST00000190008.2|Aamp|ENSMUSG00000006299.14|angio-associated migratory protein
mm39_v1_chr4_+_132738787_132738817	0.315767	Gli3_Zic1	ENSMUST00000105915.8|Ahdc1|ENSMUSG00000037692.15|AT hook, DNA binding motif, containing 1	ENSMUST00000105916.8|Ahdc1|ENSMUSG00000037692.15|AT hook, DNA binding motif, containing 1
mm39_v1_chr2_-_35994819_35994903	0.305969	Gli3_Zic1	ENSMUST00000148852.4|Lhx6|ENSMUSG00000026890.20|LIM homeobox protein 6
mm39_v1_chr18_+_22478146_22478146	0.290151	Gli3_Zic1	ENSMUST00000120223.8|Asxl3|ENSMUSG00000045215.18|ASXL transcriptional regulator 3	ENSMUST00000097655.4|Asxl3|ENSMUSG00000045215.18|ASXL transcriptional regulator 3
mm39_v1_chr5_+_135916764_135916775	0.281569	Gli3_Zic1	ENSMUST00000005077.7|Hspb1|ENSMUSG00000004951.11|heat shock protein 1
mm39_v1_chrX_-_135939007_135939058	0.263445	Gli3_Zic1	ENSMUST00000113070.9|Slc25a53|ENSMUSG00000044348.15|solute carrier family 25, member 53	ENSMUST00000113069.9|Slc25a53|ENSMUSG00000044348.15|solute carrier family 25, member 53
mm39_v1_chrX_+_93278203_93278210	0.260272	Gli3_Zic1	ENSMUST00000153900.8|Klhl15|ENSMUSG00000043929.17|kelch-like 15
mm39_v1_chr10_-_128245501_128245743	0.258038	Gli3_Zic1	ENSMUST00000172348.8|Nabp2|ENSMUSG00000025374.14|nucleic acid binding protein 2	ENSMUST00000166608.8|Nabp2|ENSMUSG00000025374.14|nucleic acid binding protein 2	ENSMUST00000164199.8|Nabp2|ENSMUSG00000025374.14|nucleic acid binding protein 2	ENSMUST00000171370.2|Nabp2|ENSMUSG00000025374.14|nucleic acid binding protein 2	ENSMUST00000026439.14|Nabp2|ENSMUSG00000025374.14|nucleic acid binding protein 2
mm39_v1_chr5_-_34792361_34792409	0.251411	Gli3_Zic1	ENSMUST00000202065.2|Mfsd10|ENSMUSG00000001082.13|major facilitator superfamily domain containing 10
mm39_v1_chr11_+_115310885_115310954	0.248945	Gli3_Zic1	ENSMUST00000103035.10|Kctd2|ENSMUSG00000016940.19|potassium channel tetramerisation domain containing 2
mm39_v1_chr4_-_40948196_40948296	0.241436	Gli3_Zic1	ENSMUST00000030125.5|Bag1|ENSMUSG00000028416.14|BCL2-associated athanogene 1	ENSMUST00000108089.8|Bag1|ENSMUSG00000028416.14|BCL2-associated athanogene 1	ENSMUST00000191273.7|Bag1|ENSMUSG00000028416.14|BCL2-associated athanogene 1
mm39_v1_chr12_-_69771604_69771659	0.235996	Gli3_Zic1	ENSMUST00000021370.10|L2hgdh|ENSMUSG00000020988.10|L-2-hydroxyglutarate dehydrogenase
mm39_v1_chrX_-_73436293_73436405	0.220538	Gli3_Zic1	ENSMUST00000114138.8|Fam3a|ENSMUSG00000031399.16|family with sequence similarity 3, member A
mm39_v1_chr7_+_140247202_140247202	0.208766	Gli3_Zic1	ENSMUST00000078967.3|Olfr539|ENSMUSG00000059136.5|olfactory receptor 539
mm39_v1_chr5_+_93241287_93241310	0.19826	Gli3_Zic1	ENSMUST00000074733.11|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000201700.4|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000202196.4|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000202308.4|Septin11|ENSMUSG00000058013.12|septin 11
mm39_v1_chr4_-_150039486_150039507	0.184792	Gli3_Zic1	ENSMUST00000038562.9|Spsb1|ENSMUSG00000039911.14|splA/ryanodine receptor domain and SOCS box containing 1
mm39_v1_chr7_-_44635740_44635780	0.172192	Gli3_Zic1	ENSMUST00000209056.3|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1	ENSMUST00000209124.2|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1	ENSMUST00000208312.2|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1	ENSMUST00000207659.2|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1	ENSMUST00000045325.14|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1
mm39_v1_chr11_+_77654072_77654166	0.170336	Gli3_Zic1	ENSMUST00000108375.9|Myo18a|ENSMUSG00000000631.21|myosin XVIIIA
mm39_v1_chr2_-_103627937_103628009	0.169595	Gli3_Zic1	ENSMUST00000028607.13|Caprin1|ENSMUSG00000027184.15|cell cycle associated protein 1
mm39_v1_chrX_+_160500623_160500653	0.161491	Gli3_Zic1	ENSMUST00000061514.8|Rai2|ENSMUSG00000043518.8|retinoic acid induced 2
mm39_v1_chr3_+_138058139_138058139	0.157941	Gli3_Zic1	ENSMUST00000090166.5|Adh6b|ENSMUSG00000074206.8|alcohol dehydrogenase 6B (class V)
mm39_v1_chr2_+_29780532_29780557	0.15783	Gli3_Zic1	ENSMUST00000113764.4|Odf2|ENSMUSG00000026790.20|outer dense fiber of sperm tails 2
mm39_v1_chr17_+_35354655_35354774	0.156288	Gli3_Zic1	ENSMUST00000174478.8|Bag6|ENSMUSG00000024392.18|BCL2-associated athanogene 6	ENSMUST00000174281.9|Bag6|ENSMUSG00000024392.18|BCL2-associated athanogene 6	ENSMUST00000173550.8|Bag6|ENSMUSG00000024392.18|BCL2-associated athanogene 6
mm39_v1_chr8_-_35432783_35432869	0.154944	Gli3_Zic1	ENSMUST00000033929.6|Tnks|ENSMUSG00000031529.6|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
mm39_v1_chr3_+_135144287_135144301	0.15023	Gli3_Zic1	ENSMUST00000196591.5|Ube2d3|ENSMUSG00000078578.10|ubiquitin-conjugating enzyme E2D 3
mm39_v1_chr9_-_99592058_99592075	0.146126	Gli3_Zic1	ENSMUST00000136429.8|Cldn18|ENSMUSG00000032473.14|claudin 18
mm39_v1_chr1_+_166829001_166829040	0.14582	Gli3_Zic1	ENSMUST00000126198.3|Fam78b|ENSMUSG00000060568.15|family with sequence similarity 78, member B
mm39_v1_chr1_+_125488747_125488832	0.133277	Gli3_Zic1	ENSMUST00000027580.11|Slc35f5|ENSMUSG00000026342.11|solute carrier family 35, member F5
mm39_v1_chr19_-_6899121_6899171	0.130307	Gli3_Zic1	ENSMUST00000173635.2|Esrra|ENSMUSG00000024955.16|estrogen related receptor, alpha
mm39_v1_chr13_-_14787602_14787750	0.127702	Gli3_Zic1	ENSMUST00000220621.2|Mrpl32|ENSMUSG00000015672.5|mitochondrial ribosomal protein L32
mm39_v1_chr4_+_12140263_12140317	0.127622	Gli3_Zic1	ENSMUST00000050069.9|Rbm12b1|ENSMUSG00000046667.15|RNA binding motif protein 12 B1	ENSMUST00000069128.8|Rbm12b1|ENSMUSG00000046667.15|RNA binding motif protein 12 B1
mm39_v1_chr15_+_40518414_40518450	0.125775	Gli3_Zic1	ENSMUST00000053467.6|Zfpm2|ENSMUSG00000022306.10|zinc finger protein, multitype 2
mm39_v1_chr13_-_63579497_63579547	0.125506	Gli3_Zic1	ENSMUST00000160931.2|Fancc|ENSMUSG00000021461.18|Fanconi anemia, complementation group C	ENSMUST00000099444.10|Fancc|ENSMUSG00000021461.18|Fanconi anemia, complementation group C	ENSMUST00000220684.2|Fancc|ENSMUSG00000021461.18|Fanconi anemia, complementation group C	ENSMUST00000161977.8|Fancc|ENSMUSG00000021461.18|Fanconi anemia, complementation group C	ENSMUST00000163091.8|Fancc|ENSMUSG00000021461.18|Fanconi anemia, complementation group C
mm39_v1_chr2_+_118730823_118730878	0.116645	Gli3_Zic1	ENSMUST00000151162.2|Bahd1|ENSMUSG00000040007.9|bromo adjacent homology domain containing 1
mm39_v1_chr9_+_108394005_108394168	0.0906972	Gli3_Zic1	ENSMUST00000195563.6|Qrich1|ENSMUSG00000006673.15|glutamine-rich 1
mm39_v1_chr7_-_44702269_44702338	0.0846735	Gli3_Zic1	ENSMUST00000057293.8|Prr12|ENSMUSG00000046574.9|proline rich 12
mm39_v1_chr5_+_135916847_135916872	0.0818508	Gli3_Zic1	ENSMUST00000111155.2|Hspb1|ENSMUSG00000004951.11|heat shock protein 1
mm39_v1_chr14_-_8457069_8457272	0.0678437	Gli3_Zic1	ENSMUST00000022257.4|Atxn7|ENSMUSG00000021738.6|ataxin 7
mm39_v1_chr13_+_81931642_81931677	0.0574151	Gli3_Zic1	ENSMUST00000224574.2|Cetn3|ENSMUSG00000021537.10|centrin 3
mm39_v1_chr17_-_68311073_68311135	0.0514699	Gli3_Zic1	ENSMUST00000024840.12|Arhgap28|ENSMUSG00000024043.14|Rho GTPase activating protein 28
mm39_v1_chr7_+_66339637_66339728	0.0493191	Gli3_Zic1	ENSMUST00000153007.2|Lins1|ENSMUSG00000053091.17|lines homolog 1	ENSMUST00000121777.9|Lins1|ENSMUSG00000053091.17|lines homolog 1	ENSMUST00000150071.8|Lins1|ENSMUSG00000053091.17|lines homolog 1	ENSMUST00000077967.13|Lins1|ENSMUSG00000053091.17|lines homolog 1
mm39_v1_chr12_+_103281188_103281224	0.045094	Gli3_Zic1	ENSMUST00000189885.2|Fam181a|ENSMUSG00000096753.8|family with sequence similarity 181, member A	ENSMUST00000179363.2|Fam181a|ENSMUSG00000096753.8|family with sequence similarity 181, member A
mm39_v1_chr4_+_131648509_131648518	0.0406366	Gli3_Zic1	ENSMUST00000238733.2|Tmem200b|ENSMUSG00000070720.5|transmembrane protein 200B
mm39_v1_chr4_-_137493785_137493814	0.0292397	Gli3_Zic1	ENSMUST00000139951.8|Alpl|ENSMUSG00000028766.11|alkaline phosphatase, liver/bone/kidney
mm39_v1_chr17_-_25394445_25394445	0.0282044	Gli3_Zic1	ENSMUST00000224277.2|Percc1|ENSMUSG00000114245.2|proline and glutamate rich with coiled coil 1
mm39_v1_chr2_-_25101354_25101501	0.027706	Gli3_Zic1	ENSMUST00000059849.15|Nelfb|ENSMUSG00000013465.20|negative elongation factor complex member B
mm39_v1_chrX_+_100427331_100427347	0.0231408	Gli3_Zic1	ENSMUST00000119190.2|Gjb1|ENSMUSG00000047797.15|gap junction protein, beta 1
mm39_v1_chrX_-_73009933_73009982	0.0227387	Gli3_Zic1	ENSMUST00000114372.3|Hcfc1|ENSMUSG00000031386.15|host cell factor C1	ENSMUST00000033761.13|Hcfc1|ENSMUSG00000031386.15|host cell factor C1
mm39_v1_chr4_+_40948407_40948504	0.0112274	Gli3_Zic1	ENSMUST00000030128.6|Chmp5|ENSMUSG00000028419.6|charged multivesicular body protein 5
