mm39_v1_chr18_+_61096660_61096673	15.138	Hoxa4	ENSMUST00000039904.7|Camk2a|ENSMUSG00000024617.17|calcium/calmodulin-dependent protein kinase II alpha
mm39_v1_chr18_+_61096597_61096651	14.8335	Hoxa4	ENSMUST00000115295.9|Camk2a|ENSMUSG00000024617.17|calcium/calmodulin-dependent protein kinase II alpha
mm39_v1_chr3_+_7494108_7494122	11.7639	Hoxa4	ENSMUST00000193330.2|Pkia|ENSMUSG00000027499.13|protein kinase inhibitor, alpha
mm39_v1_chrX_+_135723531_135723548	11.7519	Hoxa4	ENSMUST00000113085.2|Plp1|ENSMUSG00000031425.16|proteolipid protein (myelin) 1
mm39_v1_chrX_+_135723420_135723518	11.3503	Hoxa4	ENSMUST00000033800.13|Plp1|ENSMUSG00000031425.16|proteolipid protein (myelin) 1
mm39_v1_chr4_-_61259997_61259999	9.37854	Hoxa4	ENSMUST00000071005.9|Mup14|ENSMUSG00000073830.12|major urinary protein 14	ENSMUST00000075206.12|Mup14|ENSMUSG00000073830.12|major urinary protein 14
mm39_v1_chr11_+_56902658_56902782	9.19362	Hoxa4	ENSMUST00000094179.11|Gria1|ENSMUSG00000020524.17|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm39_v1_chr13_+_46655324_46655360	9.05925	Hoxa4	ENSMUST00000021802.16|Cap2|ENSMUSG00000021373.17|CAP, adenylate cyclase-associated protein, 2 (yeast)
mm39_v1_chr12_-_46863726_46863743	8.80568	Hoxa4	ENSMUST00000219330.2|Nova1|ENSMUSG00000021047.8|NOVA alternative splicing regulator 1
mm39_v1_chr13_-_78344492_78344561	8.76675	Hoxa4	ENSMUST00000125176.3|Nr2f1|ENSMUSG00000069171.15|nuclear receptor subfamily 2, group F, member 1
mm39_v1_chr4_-_60222580_60222599	8.69763	Hoxa4	ENSMUST00000095058.5|Mup8|ENSMUSG00000078687.10|major urinary protein 8	ENSMUST00000163931.8|Mup8|ENSMUSG00000078687.10|major urinary protein 8
mm39_v1_chr4_-_61259801_61259801	8.46383	Hoxa4	ENSMUST00000125461.8|Mup14|ENSMUSG00000073830.12|major urinary protein 14
mm39_v1_chr12_+_38830283_38830348	8.41944	Hoxa4	ENSMUST00000162563.8|Etv1|ENSMUSG00000004151.18|ets variant 1	ENSMUST00000161164.8|Etv1|ENSMUSG00000004151.18|ets variant 1	ENSMUST00000160996.8|Etv1|ENSMUSG00000004151.18|ets variant 1
mm39_v1_chr12_+_38830812_38830847	8.39949	Hoxa4	ENSMUST00000160856.8|Etv1|ENSMUSG00000004151.18|ets variant 1
mm39_v1_chr11_+_56902624_56902653	8.14037	Hoxa4	ENSMUST00000036315.16|Gria1|ENSMUSG00000020524.17|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm39_v1_chr13_+_58955506_58955515	7.82241	Hoxa4	ENSMUST00000079828.7|Ntrk2|ENSMUSG00000055254.16|neurotrophic tyrosine kinase, receptor, type 2
mm39_v1_chr12_-_31763859_31763946	7.63206	Hoxa4	ENSMUST00000057783.6|Gpr22|ENSMUSG00000044067.8|G protein-coupled receptor 22	ENSMUST00000236002.2|Gpr22|ENSMUSG00000044067.8|G protein-coupled receptor 22	ENSMUST00000174480.3|Gpr22|ENSMUSG00000044067.8|G protein-coupled receptor 22	ENSMUST00000176710.2|Gpr22|ENSMUSG00000044067.8|G protein-coupled receptor 22
mm39_v1_chr3_+_114874614_114874703	7.58648	Hoxa4	ENSMUST00000051309.9|Olfm3|ENSMUSG00000027965.16|olfactomedin 3
mm39_v1_chr5_-_84565218_84565248	7.52343	Hoxa4	ENSMUST00000113401.4|Epha5|ENSMUSG00000029245.17|Eph receptor A5
mm39_v1_chr2_+_170573727_170573838	7.43225	Hoxa4	ENSMUST00000029075.5|Dok5|ENSMUSG00000027560.5|docking protein 5
mm39_v1_chr17_+_93506435_93506459	7.36625	Hoxa4	ENSMUST00000234646.2|Adcyap1|ENSMUSG00000024256.8|adenylate cyclase activating polypeptide 1	ENSMUST00000234081.2|Adcyap1|ENSMUSG00000024256.8|adenylate cyclase activating polypeptide 1
mm39_v1_chr2_+_70393782_70393805	7.26085	Hoxa4	ENSMUST00000123330.3|Gad1|ENSMUSG00000070880.11|glutamate decarboxylase 1
mm39_v1_chr11_+_97732108_97732185	7.12031	Hoxa4	ENSMUST00000155954.3|B230217C12Rik|ENSMUSG00000050538.9|RIKEN cDNA B230217C12 gene	ENSMUST00000164364.2|B230217C12Rik|ENSMUSG00000050538.9|RIKEN cDNA B230217C12 gene	ENSMUST00000170806.2|B230217C12Rik|ENSMUSG00000050538.9|RIKEN cDNA B230217C12 gene
mm39_v1_chr2_+_177969456_177969585	6.82539	Hoxa4	ENSMUST00000133267.3|Phactr3|ENSMUSG00000027525.19|phosphatase and actin regulator 3
mm39_v1_chr6_-_138404076_138404160	6.78861	Hoxa4	ENSMUST00000203435.3|Lmo3|ENSMUSG00000030226.13|LIM domain only 3
mm39_v1_chr13_+_42834039_42834099	6.78431	Hoxa4	ENSMUST00000128646.8|Phactr1|ENSMUSG00000054728.18|phosphatase and actin regulator 1
mm39_v1_chr17_+_93506590_93506601	6.60356	Hoxa4	ENSMUST00000064775.8|Adcyap1|ENSMUSG00000024256.8|adenylate cyclase activating polypeptide 1
mm39_v1_chr6_-_138403732_138403814	6.59863	Hoxa4	ENSMUST00000162932.2|Lmo3|ENSMUSG00000030226.13|LIM domain only 3
mm39_v1_chr18_-_32082624_32082689	6.5608	Hoxa4	ENSMUST00000064016.6|Gpr17|ENSMUSG00000052229.6|G protein-coupled receptor 17
mm39_v1_chr4_-_149211145_149211220	6.43228	Hoxa4	ENSMUST00000030815.3|Cort|ENSMUSG00000028971.5|cortistatin
mm39_v1_chr18_+_37488174_37488324	6.33172	Hoxa4	ENSMUST00000192867.2|Pcdhb8|ENSMUSG00000045876.5|protocadherin beta 8	ENSMUST00000051163.3|Pcdhb8|ENSMUSG00000045876.5|protocadherin beta 8
mm39_v1_chr6_-_92511836_92511868	6.23462	Hoxa4	ENSMUST00000113446.8|Prickle2|ENSMUSG00000030020.14|prickle planar cell polarity protein 2
mm39_v1_chr14_-_51134930_51134964	6.02379	Hoxa4	ENSMUST00000227271.2|Klhl33|ENSMUSG00000090799.3|kelch-like 33
mm39_v1_chr8_-_68427217_68427248	5.97367	Hoxa4	ENSMUST00000098696.10|Psd3|ENSMUSG00000030465.20|pleckstrin and Sec7 domain containing 3	ENSMUST00000038959.16|Psd3|ENSMUSG00000030465.20|pleckstrin and Sec7 domain containing 3	ENSMUST00000093469.11|Psd3|ENSMUSG00000030465.20|pleckstrin and Sec7 domain containing 3
mm39_v1_chr1_-_180021218_180021231	5.89944	Hoxa4	ENSMUST00000159914.8|Coq8a|ENSMUSG00000026489.14|coenzyme Q8A
mm39_v1_chr1_-_180021039_180021057	5.72214	Hoxa4	ENSMUST00000160482.8|Coq8a|ENSMUSG00000026489.14|coenzyme Q8A	ENSMUST00000170472.8|Coq8a|ENSMUSG00000026489.14|coenzyme Q8A
mm39_v1_chr7_-_19432933_19433113	5.65568	Hoxa4	ENSMUST00000174355.8|Apoe|ENSMUSG00000002985.17|apolipoprotein E	ENSMUST00000172983.8|Apoe|ENSMUSG00000002985.17|apolipoprotein E	ENSMUST00000174710.2|Apoe|ENSMUSG00000002985.17|apolipoprotein E	ENSMUST00000003066.16|Apoe|ENSMUSG00000002985.17|apolipoprotein E	ENSMUST00000174064.9|Apoe|ENSMUSG00000002985.17|apolipoprotein E
mm39_v1_chr16_+_37400590_37400617	5.62747	Hoxa4	ENSMUST00000159787.8|Hgd|ENSMUSG00000022821.14|homogentisate 1, 2-dioxygenase
mm39_v1_chr16_+_37400500_37400515	5.59375	Hoxa4	ENSMUST00000160847.2|Hgd|ENSMUSG00000022821.14|homogentisate 1, 2-dioxygenase
mm39_v1_chr13_+_58956077_58956100	5.53486	Hoxa4	ENSMUST00000109838.10|Ntrk2|ENSMUSG00000055254.16|neurotrophic tyrosine kinase, receptor, type 2
mm39_v1_chr12_+_38831093_38831128	5.51618	Hoxa4	ENSMUST00000161513.9|Etv1|ENSMUSG00000004151.18|ets variant 1
mm39_v1_chr6_+_8949669_8949686	5.46412	Hoxa4	ENSMUST00000060369.4|Nxph1|ENSMUSG00000046178.4|neurexophilin 1
mm39_v1_chr8_+_114932312_114932411	5.46351	Hoxa4	ENSMUST00000049509.7|Vat1l|ENSMUSG00000046844.7|vesicle amine transport protein 1 like	ENSMUST00000150963.2|Vat1l|ENSMUSG00000046844.7|vesicle amine transport protein 1 like
mm39_v1_chr10_-_63926044_63926076	5.44593	Hoxa4	ENSMUST00000105439.2|Lrrtm3|ENSMUSG00000042846.9|leucine rich repeat transmembrane neuronal 3
mm39_v1_chr18_+_86729645_86729775	5.42244	Hoxa4	ENSMUST00000122464.8|Cbln2|ENSMUSG00000024647.15|cerebellin 2 precursor protein
mm39_v1_chr4_-_60697274_60697325	5.40419	Hoxa4	ENSMUST00000117932.2|Mup12|ENSMUSG00000094793.2|major urinary protein 12
mm39_v1_chr6_+_77219627_77219680	5.37709	Hoxa4	ENSMUST00000159616.2|Lrrtm1|ENSMUSG00000060780.3|leucine rich repeat transmembrane neuronal 1
mm39_v1_chr13_+_58955675_58955697	5.3385	Hoxa4	ENSMUST00000224402.2|Ntrk2|ENSMUSG00000055254.16|neurotrophic tyrosine kinase, receptor, type 2
mm39_v1_chr6_+_77219698_77219712	5.19788	Hoxa4	ENSMUST00000161677.2|Lrrtm1|ENSMUSG00000060780.3|leucine rich repeat transmembrane neuronal 1
mm39_v1_chr14_+_65504067_65504142	5.1703	Hoxa4	ENSMUST00000224629.2|Fbxo16|ENSMUSG00000034532.10|F-box protein 16
mm39_v1_chr15_-_37459570_37459650	5.16483	Hoxa4	ENSMUST00000119730.8|Ncald|ENSMUSG00000051359.16|neurocalcin delta	ENSMUST00000120746.8|Ncald|ENSMUSG00000051359.16|neurocalcin delta
mm39_v1_chr13_+_83672654_83672682	5.13713	Hoxa4	ENSMUST00000199019.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr9_+_109865810_109865893	5.13513	Hoxa4	ENSMUST00000163190.8|Map4|ENSMUSG00000032479.16|microtubule-associated protein 4
mm39_v1_chr14_+_65504151_65504201	5.11792	Hoxa4	ENSMUST00000169656.3|Fbxo16|ENSMUSG00000034532.10|F-box protein 16	ENSMUST00000226005.2|Fbxo16|ENSMUSG00000034532.10|F-box protein 16
mm39_v1_chr6_+_58810674_58810718	5.09838	Hoxa4	ENSMUST00000041401.11|Herc3|ENSMUSG00000029804.18|hect domain and RLD 3
mm39_v1_chr4_+_101407608_101407791	5.0918	Hoxa4	ENSMUST00000094953.11|Dnajc6|ENSMUSG00000028528.18|DnaJ heat shock protein family (Hsp40) member C6	ENSMUST00000106933.2|Dnajc6|ENSMUSG00000028528.18|DnaJ heat shock protein family (Hsp40) member C6
mm39_v1_chr3_+_68479578_68479723	5.06272	Hoxa4	ENSMUST00000170788.9|Schip1|ENSMUSG00000027777.16|schwannomin interacting protein 1
mm39_v1_chr18_+_37568647_37568679	4.87242	Hoxa4	ENSMUST00000055495.6|Pcdhb12|ENSMUSG00000043458.6|protocadherin beta 12
mm39_v1_chr18_+_37952556_37952571	4.86928	Hoxa4	ENSMUST00000055935.11|Pcdhgc5|ENSMUSG00000102543.6|protocadherin gamma subfamily C, 5
mm39_v1_chr18_+_86729184_86729235	4.82817	Hoxa4	ENSMUST00000068423.10|Cbln2|ENSMUSG00000024647.15|cerebellin 2 precursor protein
mm39_v1_chr5_-_122140403_122140431	4.77226	Hoxa4	ENSMUST00000134326.2|Cux2|ENSMUSG00000042589.19|cut-like homeobox 2
mm39_v1_chr5_+_137059127_137059218	4.77131	Hoxa4	ENSMUST00000041543.9|Vgf|ENSMUSG00000037428.15|VGF nerve growth factor inducible	ENSMUST00000186451.2|Vgf|ENSMUSG00000037428.15|VGF nerve growth factor inducible
mm39_v1_chr12_+_29584560_29584643	4.75747	Hoxa4	ENSMUST00000021009.10|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like
mm39_v1_chr1_-_5140504_5140511	4.69274	Hoxa4	ENSMUST00000147158.2|Rgs20|ENSMUSG00000002459.18|regulator of G-protein signaling 20	ENSMUST00000118000.8|Rgs20|ENSMUSG00000002459.18|regulator of G-protein signaling 20
mm39_v1_chr7_+_131568167_131568198	4.66364	Hoxa4	ENSMUST00000045840.5|Gpr26|ENSMUSG00000040125.5|G protein-coupled receptor 26
mm39_v1_chr14_-_109151590_109151615	4.53526	Hoxa4	ENSMUST00000100322.4|Slitrk1|ENSMUSG00000075478.4|SLIT and NTRK-like family, member 1
mm39_v1_chr18_-_61147272_61147334	4.50607	Hoxa4	ENSMUST00000025520.10|Slc6a7|ENSMUSG00000052026.9|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7
mm39_v1_chr5_-_87074380_87074396	4.48467	Hoxa4	ENSMUST00000031183.3|Ugt2b1|ENSMUSG00000035836.3|UDP glucuronosyltransferase 2 family, polypeptide B1
mm39_v1_chr6_-_77956499_77956605	4.46688	Hoxa4	ENSMUST00000159626.8|Ctnna2|ENSMUSG00000063063.13|catenin (cadherin associated protein), alpha 2	ENSMUST00000075340.12|Ctnna2|ENSMUSG00000063063.13|catenin (cadherin associated protein), alpha 2	ENSMUST00000162273.2|Ctnna2|ENSMUSG00000063063.13|catenin (cadherin associated protein), alpha 2
mm39_v1_chr18_+_37622518_37622518	4.3998	Hoxa4	ENSMUST00000055949.4|Pcdhb18|ENSMUSG00000048347.6|protocadherin beta 18
mm39_v1_chr10_-_70491764_70491802	4.27209	Hoxa4	ENSMUST00000162144.2|Phyhipl|ENSMUSG00000037747.10|phytanoyl-CoA hydroxylase interacting protein-like	ENSMUST00000162793.8|Phyhipl|ENSMUSG00000037747.10|phytanoyl-CoA hydroxylase interacting protein-like
mm39_v1_chr8_+_12999394_12999428	4.25055	Hoxa4	ENSMUST00000110867.9|Mcf2l|ENSMUSG00000031442.22|mcf.2 transforming sequence-like
mm39_v1_chr3_-_146487102_146487187	4.24639	Hoxa4	ENSMUST00000005164.12|Prkacb|ENSMUSG00000005034.16|protein kinase, cAMP dependent, catalytic, beta
mm39_v1_chr5_-_135494775_135494802	4.20502	Hoxa4	ENSMUST00000212301.2|Hip1|ENSMUSG00000039959.14|huntingtin interacting protein 1
mm39_v1_chr14_-_80008745_80008758	4.18085	Hoxa4	ENSMUST00000039568.11|Pcdh8|ENSMUSG00000036422.11|protocadherin 8	ENSMUST00000195355.2|Pcdh8|ENSMUSG00000036422.11|protocadherin 8
mm39_v1_chr8_+_12999480_12999510	4.17262	Hoxa4	ENSMUST00000110866.9|Mcf2l|ENSMUSG00000031442.22|mcf.2 transforming sequence-like
mm39_v1_chr10_-_109669053_109669082	4.13507	Hoxa4	ENSMUST00000238286.2|Nav3|ENSMUSG00000020181.19|neuron navigator 3
mm39_v1_chr1_-_189902868_189902942	4.04194	Hoxa4	ENSMUST00000177288.4|Prox1|ENSMUSG00000010175.14|prospero homeobox 1	ENSMUST00000175916.8|Prox1|ENSMUSG00000010175.14|prospero homeobox 1
mm39_v1_chrX_-_58211440_58211524	4.01246	Hoxa4	ENSMUST00000119306.2|Fgf13|ENSMUSG00000031137.18|fibroblast growth factor 13
mm39_v1_chr1_-_110905082_110905112	3.97803	Hoxa4	ENSMUST00000094626.5|Cdh19|ENSMUSG00000047216.9|cadherin 19, type 2
mm39_v1_chr3_-_19749489_19749560	3.82316	Hoxa4	ENSMUST00000061294.5|Crh|ENSMUSG00000049796.5|corticotropin releasing hormone
mm39_v1_chrM_+_10167_10167	3.81991	Hoxa4	ENSMUST00000082414.1|mt-Nd4|ENSMUSG00000064363.1|mitochondrially encoded NADH dehydrogenase 4
mm39_v1_chr6_+_134958681_134958681	3.80061	Hoxa4	ENSMUST00000167323.3|Apold1|ENSMUSG00000090698.3|apolipoprotein L domain containing 1
mm39_v1_chr17_-_43978056_43978105	3.79017	Hoxa4	ENSMUST00000024705.6|Slc25a27|ENSMUSG00000023912.11|solute carrier family 25, member 27
mm39_v1_chr18_+_37952596_37952623	3.77448	Hoxa4	ENSMUST00000193890.2|Pcdhgc5|ENSMUSG00000102543.6|protocadherin gamma subfamily C, 5	ENSMUST00000193941.2|Pcdhgc5|ENSMUSG00000102543.6|protocadherin gamma subfamily C, 5
mm39_v1_chr14_-_51134906_51134914	3.74029	Hoxa4	ENSMUST00000170855.2|Klhl33|ENSMUSG00000090799.3|kelch-like 33
mm39_v1_chr18_+_57605525_57605551	3.73547	Hoxa4	ENSMUST00000209786.2|Ctxn3|ENSMUSG00000069372.4|cortexin 3
mm39_v1_chr6_+_97187650_97187690	3.70931	Hoxa4	ENSMUST00000044681.7|Arl6ip5|ENSMUSG00000035199.7|ADP-ribosylation factor-like 6 interacting protein 5
mm39_v1_chr2_+_71359000_71359027	3.70582	Hoxa4	ENSMUST00000126400.2|Dlx1|ENSMUSG00000041911.4|distal-less homeobox 1
mm39_v1_chr12_+_38830081_38830116	3.69486	Hoxa4	ENSMUST00000095767.11|Etv1|ENSMUSG00000004151.18|ets variant 1
mm39_v1_chr2_-_57003064_57003084	3.68741	Hoxa4	ENSMUST00000112627.2|Nr4a2|ENSMUSG00000026826.14|nuclear receptor subfamily 4, group A, member 2
mm39_v1_chr6_-_102441628_102441628	3.64459	Hoxa4	ENSMUST00000032159.7|Cntn3|ENSMUSG00000030075.11|contactin 3
mm39_v1_chr5_-_36771074_36771083	3.60992	Hoxa4	ENSMUST00000132383.6|D5Ertd579e|ENSMUSG00000029190.20|DNA segment, Chr 5, ERATO Doi 579, expressed	ENSMUST00000174019.2|Gm42936|ENSMUSG00000106797.2|predicted gene 42936
mm39_v1_chr9_+_44309727_44309771	3.60881	Hoxa4	ENSMUST00000213268.2|Slc37a4|ENSMUSG00000032114.10|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm39_v1_chr12_+_29578354_29578468	3.57151	Hoxa4	ENSMUST00000218583.2|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like	ENSMUST00000049784.17|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like
mm39_v1_chr12_+_103524690_103524690	3.55748	Hoxa4	ENSMUST00000187155.7|Ppp4r4|ENSMUSG00000021209.13|protein phosphatase 4, regulatory subunit 4
mm39_v1_chr18_+_37898633_37898633	3.54432	Hoxa4	ENSMUST00000044851.8|Pcdhga12|ENSMUSG00000102428.2|protocadherin gamma subfamily A, 12
mm39_v1_chr12_-_41536430_41536430	3.5229	Hoxa4	ENSMUST00000043884.6|Lrrn3|ENSMUSG00000036295.6|leucine rich repeat protein 3, neuronal
mm39_v1_chr2_-_115896279_115896334	3.47176	Hoxa4	ENSMUST00000110907.8|Meis2|ENSMUSG00000027210.21|Meis homeobox 2	ENSMUST00000110908.9|Meis2|ENSMUSG00000027210.21|Meis homeobox 2
mm39_v1_chr6_-_124790029_124790055	3.45864	Hoxa4	ENSMUST00000149610.3|Tpi1|ENSMUSG00000023456.17|triosephosphate isomerase 1
mm39_v1_chr12_+_69954506_69954519	3.45181	Hoxa4	ENSMUST00000223456.2|Atl1|ENSMUSG00000021066.10|atlastin GTPase 1
mm39_v1_chr1_-_67077906_67078065	3.39143	Hoxa4	ENSMUST00000119559.8|Lancl1|ENSMUSG00000026000.17|LanC (bacterial lantibiotic synthetase component C)-like 1	ENSMUST00000149996.2|Lancl1|ENSMUSG00000026000.17|LanC (bacterial lantibiotic synthetase component C)-like 1	ENSMUST00000027149.12|Lancl1|ENSMUSG00000026000.17|LanC (bacterial lantibiotic synthetase component C)-like 1	ENSMUST00000113979.10|Lancl1|ENSMUSG00000026000.17|LanC (bacterial lantibiotic synthetase component C)-like 1
mm39_v1_chr1_-_158183894_158183914	3.38427	Hoxa4	ENSMUST00000004133.11|Brinp2|ENSMUSG00000004031.14|bone morphogenic protein/retinoic acid inducible neural-specific 2
mm39_v1_chr8_+_22996233_22996247	3.3685	Hoxa4	ENSMUST00000210854.2|Slc20a2|ENSMUSG00000037656.10|solute carrier family 20, member 2
mm39_v1_chr1_+_179938904_179938904	3.34832	Hoxa4	ENSMUST00000145181.2|Cdc42bpa|ENSMUSG00000026490.19|CDC42 binding protein kinase alpha
mm39_v1_chr17_+_6057868_6057893	3.33731	Hoxa4	ENSMUST00000115785.8|Synj2|ENSMUSG00000023805.18|synaptojanin 2
mm39_v1_chr14_-_36820304_36820321	3.32963	Hoxa4	ENSMUST00000022337.11|Cdhr1|ENSMUSG00000021803.11|cadherin-related family member 1
mm39_v1_chr5_+_137059522_137059555	3.26767	Hoxa4	ENSMUST00000187382.2|Vgf|ENSMUSG00000037428.15|VGF nerve growth factor inducible
mm39_v1_chr10_+_127256192_127256218	3.22872	Hoxa4	ENSMUST00000171434.8|R3hdm2|ENSMUSG00000025404.16|R3H domain containing 2
mm39_v1_chr10_+_127337541_127337596	3.21167	Hoxa4	ENSMUST00000160019.8|Stac3|ENSMUSG00000040287.10|SH3 and cysteine rich domain 3	ENSMUST00000160610.2|Stac3|ENSMUSG00000040287.10|SH3 and cysteine rich domain 3	ENSMUST00000035839.3|Stac3|ENSMUSG00000040287.10|SH3 and cysteine rich domain 3
mm39_v1_chr13_+_83672389_83672411	3.19599	Hoxa4	ENSMUST00000200394.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr2_+_20742115_20742152	3.1889	Hoxa4	ENSMUST00000114606.8|Etl4|ENSMUSG00000036617.18|enhancer trap locus 4	ENSMUST00000114608.3|Etl4|ENSMUSG00000036617.18|enhancer trap locus 4
mm39_v1_chr8_+_47439916_47439946	3.16472	Hoxa4	ENSMUST00000039840.15|Enpp6|ENSMUSG00000038173.16|ectonucleotide pyrophosphatase/phosphodiesterase 6
mm39_v1_chr4_+_101365144_101365229	3.1564	Hoxa4	ENSMUST00000149047.8|Dnajc6|ENSMUSG00000028528.18|DnaJ heat shock protein family (Hsp40) member C6	ENSMUST00000106929.10|Dnajc6|ENSMUSG00000028528.18|DnaJ heat shock protein family (Hsp40) member C6
mm39_v1_chr2_+_174169351_174169368	3.08246	Hoxa4	ENSMUST00000124935.8|Gnas|ENSMUSG00000027523.21|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm39_v1_chr16_-_96971905_96971952	3.07646	Hoxa4	ENSMUST00000056102.9|Dscam|ENSMUSG00000050272.11|DS cell adhesion molecule
mm39_v1_chr8_+_47439948_47439997	3.06813	Hoxa4	ENSMUST00000119686.2|Enpp6|ENSMUSG00000038173.16|ectonucleotide pyrophosphatase/phosphodiesterase 6
mm39_v1_chrX_+_65696608_65696638	3.0311	Hoxa4	ENSMUST00000036043.5|Slitrk2|ENSMUSG00000036790.6|SLIT and NTRK-like family, member 2
mm39_v1_chr8_-_68658694_68658736	2.90157	Hoxa4	ENSMUST00000212960.2|Psd3|ENSMUSG00000030465.20|pleckstrin and Sec7 domain containing 3
mm39_v1_chr5_-_124325213_124325266	2.87822	Hoxa4	ENSMUST00000161938.8|Pitpnm2|ENSMUSG00000029406.16|phosphatidylinositol transfer protein, membrane-associated 2
mm39_v1_chr7_+_51528715_51528750	2.86982	Hoxa4	ENSMUST00000051912.13|Gas2|ENSMUSG00000030498.16|growth arrest specific 2
mm39_v1_chr9_-_49710190_49710231	2.8599	Hoxa4	ENSMUST00000114476.8|Ncam1|ENSMUSG00000039542.17|neural cell adhesion molecule 1	ENSMUST00000193547.6|Ncam1|ENSMUSG00000039542.17|neural cell adhesion molecule 1
mm39_v1_chr2_-_5680801_5680857	2.84016	Hoxa4	ENSMUST00000114987.4|Camk1d|ENSMUSG00000039145.17|calcium/calmodulin-dependent protein kinase ID
mm39_v1_chr6_+_106095726_106095967	2.80794	Hoxa4	ENSMUST00000113258.8|Cntn4|ENSMUSG00000064293.15|contactin 4	ENSMUST00000079416.6|Cntn4|ENSMUSG00000064293.15|contactin 4
mm39_v1_chr2_+_174169539_174169561	2.78991	Hoxa4	ENSMUST00000133356.8|Gnas|ENSMUSG00000027523.21|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	ENSMUST00000087871.11|Gnas|ENSMUSG00000027523.21|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm39_v1_chrX_+_20554193_20554279	2.73829	Hoxa4	ENSMUST00000115364.8|Cdk16|ENSMUSG00000031065.15|cyclin-dependent kinase 16
mm39_v1_chr17_-_43978023_43978055	2.73059	Hoxa4	ENSMUST00000233442.2|Slc25a27|ENSMUSG00000023912.11|solute carrier family 25, member 27
mm39_v1_chr5_+_30972067_30972120	2.71338	Hoxa4	ENSMUST00000200692.4|Mapre3|ENSMUSG00000029166.15|microtubule-associated protein, RP/EB family, member 3
mm39_v1_chr17_-_82045800_82045829	2.70009	Hoxa4	ENSMUST00000235015.2|Slc8a1|ENSMUSG00000054640.16|solute carrier family 8 (sodium/calcium exchanger), member 1	ENSMUST00000163123.3|Slc8a1|ENSMUSG00000054640.16|solute carrier family 8 (sodium/calcium exchanger), member 1
mm39_v1_chr2_-_62404195_62404419	2.66346	Hoxa4	ENSMUST00000174234.8|Fap|ENSMUSG00000000392.18|fibroblast activation protein	ENSMUST00000000402.16|Fap|ENSMUSG00000000392.18|fibroblast activation protein	ENSMUST00000174448.8|Fap|ENSMUSG00000000392.18|fibroblast activation protein	ENSMUST00000102732.10|Fap|ENSMUSG00000000392.18|fibroblast activation protein
mm39_v1_chr4_-_134099840_134099873	2.64429	Hoxa4	ENSMUST00000030643.3|Extl1|ENSMUSG00000028838.12|exostosin-like glycosyltransferase 1
mm39_v1_chr8_-_85663976_85663996	2.63569	Hoxa4	ENSMUST00000109741.9|Mast1|ENSMUSG00000053693.17|microtubule associated serine/threonine kinase 1	ENSMUST00000119820.2|Mast1|ENSMUSG00000053693.17|microtubule associated serine/threonine kinase 1
mm39_v1_chr18_+_37433852_37433888	2.62653	Hoxa4	ENSMUST00000051754.2|Pcdhb3|ENSMUSG00000045498.2|protocadherin beta 3
mm39_v1_chr2_+_174169492_174169523	2.60926	Hoxa4	ENSMUST00000156623.8|Gnas|ENSMUSG00000027523.21|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	ENSMUST00000149016.9|Gnas|ENSMUSG00000027523.21|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm39_v1_chr9_-_49710058_49710172	2.59216	Hoxa4	ENSMUST00000192584.2|Ncam1|ENSMUSG00000039542.17|neural cell adhesion molecule 1	ENSMUST00000166811.9|Ncam1|ENSMUSG00000039542.17|neural cell adhesion molecule 1
mm39_v1_chr9_-_121621544_121621573	2.56783	Hoxa4	ENSMUST00000035110.11|Hhatl|ENSMUSG00000032523.12|hedgehog acyltransferase-like
mm39_v1_chr1_-_163141230_163141246	2.56229	Hoxa4	ENSMUST00000174397.3|Prrx1|ENSMUSG00000026586.17|paired related homeobox 1	ENSMUST00000075805.13|Prrx1|ENSMUSG00000026586.17|paired related homeobox 1
mm39_v1_chr8_+_46984016_46984101	2.53354	Hoxa4	ENSMUST00000152423.2|Acsl1|ENSMUSG00000018796.14|acyl-CoA synthetase long-chain family member 1
mm39_v1_chr2_-_77349909_77349991	2.51912	Hoxa4	ENSMUST00000111830.9|Zfp385b|ENSMUSG00000027016.18|zinc finger protein 385B
mm39_v1_chr6_-_12749409_12749440	2.50481	Hoxa4	ENSMUST00000119581.7|Thsd7a|ENSMUSG00000032625.15|thrombospondin, type I, domain containing 7A
mm39_v1_chr6_+_132824105_132824105	2.4591	Hoxa4	ENSMUST00000071696.2|Tas2r123|ENSMUSG00000057381.2|taste receptor, type 2, member 123
mm39_v1_chr18_+_65158873_65159029	2.41328	Hoxa4	ENSMUST00000226058.2|Nedd4l|ENSMUSG00000024589.19|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm39_v1_chrX_+_47712614_47712666	2.39308	Hoxa4	ENSMUST00000114936.8|Slc25a14|ENSMUSG00000031105.17|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm39_v1_chr12_+_84408803_84408838	2.36785	Hoxa4	ENSMUST00000110278.8|Coq6|ENSMUSG00000021235.14|coenzyme Q6 monooxygenase	ENSMUST00000145522.2|Coq6|ENSMUSG00000021235.14|coenzyme Q6 monooxygenase
mm39_v1_chr1_+_178356678_178356699	2.36266	Hoxa4	ENSMUST00000161017.8|Kif26b|ENSMUSG00000026494.13|kinesin family member 26B
mm39_v1_chr2_-_86810298_86810298	2.33461	Hoxa4	ENSMUST00000117211.3|Olfr1100|ENSMUSG00000070875.6|olfactory receptor 1100
mm39_v1_chr4_+_86493905_86493927	2.31192	Hoxa4	ENSMUST00000091064.8|Rraga|ENSMUSG00000070934.7|Ras-related GTP binding A
mm39_v1_chr14_+_117162791_117162842	2.30893	Hoxa4	ENSMUST00000088483.10|Gpc6|ENSMUSG00000058571.12|glypican 6
mm39_v1_chr6_-_116084810_116084841	2.3054	Hoxa4	ENSMUST00000204353.3|Tmcc1|ENSMUSG00000030126.18|transmembrane and coiled coil domains 1
mm39_v1_chr7_+_51528788_51528813	2.25387	Hoxa4	ENSMUST00000107591.9|Gas2|ENSMUSG00000030498.16|growth arrest specific 2
mm39_v1_chr1_+_143615294_143615379	2.25296	Hoxa4	ENSMUST00000185362.7|Glrx2|ENSMUSG00000018196.19|glutaredoxin 2 (thioltransferase)	ENSMUST00000111957.10|Glrx2|ENSMUSG00000018196.19|glutaredoxin 2 (thioltransferase)	ENSMUST00000145571.2|Glrx2|ENSMUSG00000018196.19|glutaredoxin 2 (thioltransferase)
mm39_v1_chr12_-_84408576_84408612	2.24812	Hoxa4	ENSMUST00000021659.2|Fam161b|ENSMUSG00000021234.10|family with sequence similarity 161, member B	ENSMUST00000065536.9|Fam161b|ENSMUSG00000021234.10|family with sequence similarity 161, member B
mm39_v1_chr2_-_79959802_79959893	2.23584	Hoxa4	ENSMUST00000102653.8|Pde1a|ENSMUSG00000059173.20|phosphodiesterase 1A, calmodulin-dependent
mm39_v1_chr11_-_98620200_98620261	2.22272	Hoxa4	ENSMUST00000126565.2|Med24|ENSMUSG00000017210.15|mediator complex subunit 24	ENSMUST00000100500.9|Med24|ENSMUSG00000017210.15|mediator complex subunit 24	ENSMUST00000017354.13|Med24|ENSMUSG00000017210.15|mediator complex subunit 24
mm39_v1_chr1_+_53100796_53100816	2.22266	Hoxa4	ENSMUST00000027269.7|Mstn|ENSMUSG00000026100.7|myostatin	ENSMUST00000191197.2|Mstn|ENSMUSG00000026100.7|myostatin
mm39_v1_chr10_+_69370038_69370052	2.22115	Hoxa4	ENSMUST00000182439.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial	ENSMUST00000092434.12|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial	ENSMUST00000047061.13|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial	ENSMUST00000092432.12|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial	ENSMUST00000092431.12|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial	ENSMUST00000054167.15|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial
mm39_v1_chr16_-_36810810_36810829	2.21086	Hoxa4	ENSMUST00000075869.13|Fbxo40|ENSMUSG00000047746.15|F-box protein 40
mm39_v1_chr3_+_5283606_5283621	2.18039	Hoxa4	ENSMUST00000026284.13|Zfhx4|ENSMUSG00000025255.19|zinc finger homeodomain 4
mm39_v1_chr6_+_63232955_63233024	2.16349	Hoxa4	ENSMUST00000095852.5|Grid2|ENSMUSG00000071424.11|glutamate receptor, ionotropic, delta 2
mm39_v1_chr9_+_74959259_74959419	2.14866	Hoxa4	ENSMUST00000170310.2|Arpp19|ENSMUSG00000007656.14|cAMP-regulated phosphoprotein 19	ENSMUST00000166549.2|Arpp19|ENSMUSG00000007656.14|cAMP-regulated phosphoprotein 19
mm39_v1_chr18_+_23885390_23885458	2.14001	Hoxa4	ENSMUST00000170802.8|Mapre2|ENSMUSG00000024277.15|microtubule-associated protein, RP/EB family, member 2	ENSMUST00000155708.8|Mapre2|ENSMUSG00000024277.15|microtubule-associated protein, RP/EB family, member 2	ENSMUST00000118826.9|Mapre2|ENSMUSG00000024277.15|microtubule-associated protein, RP/EB family, member 2
mm39_v1_chr7_-_142215595_142215617	2.13565	Hoxa4	ENSMUST00000145896.3|Igf2|ENSMUSG00000048583.17|insulin-like growth factor 2
mm39_v1_chr4_+_150322151_150322162	2.10516	Hoxa4	ENSMUST00000141931.2|Eno1|ENSMUSG00000063524.14|enolase 1, alpha non-neuron
mm39_v1_chr6_-_39787813_39787922	2.05762	Hoxa4	ENSMUST00000114797.2|Mrps33|ENSMUSG00000029918.10|mitochondrial ribosomal protein S33	ENSMUST00000031978.9|Mrps33|ENSMUSG00000029918.10|mitochondrial ribosomal protein S33
mm39_v1_chr11_-_116080361_116080401	2.03016	Hoxa4	ENSMUST00000148601.2|Acox1|ENSMUSG00000020777.17|acyl-Coenzyme A oxidase 1, palmitoyl
mm39_v1_chr19_-_60862964_60862994	1.99356	Hoxa4	ENSMUST00000025961.7|Prdx3|ENSMUSG00000024997.8|peroxiredoxin 3
mm39_v1_chr7_-_121700958_121701109	1.98193	Hoxa4	ENSMUST00000139456.2|Ndufab1|ENSMUSG00000030869.12|NADH:ubiquinone oxidoreductase subunit AB1	ENSMUST00000106471.9|Ndufab1|ENSMUSG00000030869.12|NADH:ubiquinone oxidoreductase subunit AB1	ENSMUST00000123296.8|Ndufab1|ENSMUSG00000030869.12|NADH:ubiquinone oxidoreductase subunit AB1	ENSMUST00000033157.10|Ndufab1|ENSMUSG00000030869.12|NADH:ubiquinone oxidoreductase subunit AB1
mm39_v1_chr12_+_84408742_84408796	1.97693	Hoxa4	ENSMUST00000021661.13|Coq6|ENSMUSG00000021235.14|coenzyme Q6 monooxygenase
mm39_v1_chr12_-_80807454_80807502	1.96325	Hoxa4	ENSMUST00000073251.8|Ccdc177|ENSMUSG00000062961.8|coiled-coil domain containing 177
mm39_v1_chr3_-_151953894_151953912	1.96161	Hoxa4	ENSMUST00000196529.5|Nexn|ENSMUSG00000039103.13|nexilin
mm39_v1_chr18_+_37580692_37580728	1.9481	Hoxa4	ENSMUST00000052387.5|Pcdhb14|ENSMUSG00000044043.5|protocadherin beta 14
mm39_v1_chr6_-_39354570_39354612	1.94797	Hoxa4	ENSMUST00000200771.4|Slc37a3|ENSMUSG00000029924.13|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	ENSMUST00000202204.4|Slc37a3|ENSMUSG00000029924.13|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	ENSMUST00000202952.2|Slc37a3|ENSMUSG00000029924.13|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	ENSMUST00000202400.4|Slc37a3|ENSMUSG00000029924.13|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	ENSMUST00000200969.4|Slc37a3|ENSMUSG00000029924.13|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	ENSMUST00000202749.4|Slc37a3|ENSMUSG00000029924.13|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	ENSMUST00000090243.8|Slc37a3|ENSMUSG00000029924.13|solute carrier family 37 (glycerol-3-phosphate transporter), member 3
mm39_v1_chr9_+_77543776_77543810	1.89291	Hoxa4	ENSMUST00000057781.8|Klhl31|ENSMUSG00000044938.9|kelch-like 31
mm39_v1_chr11_+_67090878_67090964	1.88449	Hoxa4	ENSMUST00000124516.8|Myh1|ENSMUSG00000056328.15|myosin, heavy polypeptide 1, skeletal muscle, adult	ENSMUST00000018637.15|Myh1|ENSMUSG00000056328.15|myosin, heavy polypeptide 1, skeletal muscle, adult	ENSMUST00000129018.8|Myh1|ENSMUSG00000056328.15|myosin, heavy polypeptide 1, skeletal muscle, adult
mm39_v1_chr1_+_42734051_42734105	1.88222	Hoxa4	ENSMUST00000239323.2|Pou3f3|ENSMUSG00000045515.5|POU domain, class 3, transcription factor 3	ENSMUST00000199521.5|Gm20646|ENSMUSG00000093436.7|predicted gene 20646	ENSMUST00000176807.3|Gm20646|ENSMUSG00000093436.7|predicted gene 20646
mm39_v1_chr11_-_99213769_99213783	1.81192	Hoxa4	ENSMUST00000038004.3|Krt25|ENSMUSG00000035831.3|keratin 25
mm39_v1_chr1_-_93406091_93406113	1.79344	Hoxa4	ENSMUST00000188165.2|Hdlbp|ENSMUSG00000034088.16|high density lipoprotein (HDL) binding protein
mm39_v1_chr6_+_29467717_29467769	1.78947	Hoxa4	ENSMUST00000004396.13|Atp6v1f|ENSMUSG00000004285.13|ATPase, H+ transporting, lysosomal V1 subunit F
mm39_v1_chrX_+_47712676_47712839	1.77219	Hoxa4	ENSMUST00000177710.2|Slc25a14|ENSMUSG00000031105.17|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm39_v1_chr5_-_146157711_146157801	1.73771	Hoxa4	ENSMUST00000169407.9|Rnf6|ENSMUSG00000029634.16|ring finger protein (C3H2C3 type) 6	ENSMUST00000161331.8|Rnf6|ENSMUSG00000029634.16|ring finger protein (C3H2C3 type) 6	ENSMUST00000159074.3|Rnf6|ENSMUSG00000029634.16|ring finger protein (C3H2C3 type) 6	ENSMUST00000067837.10|Rnf6|ENSMUSG00000029634.16|ring finger protein (C3H2C3 type) 6
mm39_v1_chr18_+_37440497_37440523	1.73034	Hoxa4	ENSMUST00000056712.4|Pcdhb4|ENSMUSG00000045689.4|protocadherin beta 4
mm39_v1_chr11_+_103857541_103857697	1.66794	Hoxa4	ENSMUST00000057921.10|Arf2|ENSMUSG00000062421.14|ADP-ribosylation factor 2	ENSMUST00000063347.12|Arf2|ENSMUSG00000062421.14|ADP-ribosylation factor 2
mm39_v1_chr3_+_5283577_5283604	1.65116	Hoxa4	ENSMUST00000175866.8|Zfhx4|ENSMUSG00000025255.19|zinc finger homeodomain 4
mm39_v1_chr5_-_113044216_113044271	1.6497	Hoxa4	ENSMUST00000086617.11|Myo18b|ENSMUSG00000072720.10|myosin XVIIIb
mm39_v1_chrX_+_7563370_7563458	1.63506	Hoxa4	ENSMUST00000049896.13|Gpkow|ENSMUSG00000031148.15|G patch domain and KOW motifs
mm39_v1_chr2_+_3115250_3115267	1.57382	Hoxa4	ENSMUST00000072955.12|Fam171a1|ENSMUSG00000050530.15|family with sequence similarity 171, member A1
mm39_v1_chr11_-_43727071_43727159	1.57151	Hoxa4	ENSMUST00000167574.2|Adra1b|ENSMUSG00000050541.15|adrenergic receptor, alpha 1b
mm39_v1_chr11_+_108814007_108814113	1.55474	Hoxa4	ENSMUST00000106711.2|Axin2|ENSMUSG00000000142.16|axin 2
mm39_v1_chr14_-_70879694_70879725	1.55413	Hoxa4	ENSMUST00000227123.2|Fgf17|ENSMUSG00000022101.7|fibroblast growth factor 17	ENSMUST00000022697.7|Fgf17|ENSMUSG00000022101.7|fibroblast growth factor 17
mm39_v1_chr11_+_67061908_67062046	1.54549	Hoxa4	ENSMUST00000018641.8|Myh2|ENSMUSG00000033196.18|myosin, heavy polypeptide 2, skeletal muscle, adult
mm39_v1_chr6_+_29468067_29468112	1.48797	Hoxa4	ENSMUST00000143101.4|Atp6v1f|ENSMUSG00000004285.13|ATPase, H+ transporting, lysosomal V1 subunit F	ENSMUST00000149646.3|Atp6v1f|ENSMUSG00000004285.13|ATPase, H+ transporting, lysosomal V1 subunit F
mm39_v1_chr12_+_38833501_38833526	1.46418	Hoxa4	ENSMUST00000159334.8|Etv1|ENSMUSG00000004151.18|ets variant 1
mm39_v1_chr8_-_45747883_45747901	1.42355	Hoxa4	ENSMUST00000026907.6|Klkb1|ENSMUSG00000109764.2|kallikrein B, plasma 1
mm39_v1_chr14_+_47069667_47069731	1.40582	Hoxa4	ENSMUST00000140114.3|Cgrrf1|ENSMUSG00000055128.16|cell growth regulator with ring finger domain 1	ENSMUST00000133989.8|Cgrrf1|ENSMUSG00000055128.16|cell growth regulator with ring finger domain 1
mm39_v1_chr6_+_87405968_87405982	1.36148	Hoxa4	ENSMUST00000032125.7|Bmp10|ENSMUSG00000030046.7|bone morphogenetic protein 10
mm39_v1_chr7_+_65343156_65343272	1.35783	Hoxa4	ENSMUST00000032726.14|Tm2d3|ENSMUSG00000078681.11|TM2 domain containing 3	ENSMUST00000107495.5|Tm2d3|ENSMUSG00000078681.11|TM2 domain containing 3	ENSMUST00000143508.3|Tm2d3|ENSMUSG00000078681.11|TM2 domain containing 3	ENSMUST00000129166.3|Tm2d3|ENSMUSG00000078681.11|TM2 domain containing 3	ENSMUST00000206517.2|Tm2d3|ENSMUSG00000078681.11|TM2 domain containing 3	ENSMUST00000206837.2|Tm2d3|ENSMUSG00000078681.11|TM2 domain containing 3	ENSMUST00000206628.2|Tm2d3|ENSMUSG00000078681.11|TM2 domain containing 3	ENSMUST00000206361.2|Tm2d3|ENSMUSG00000078681.11|TM2 domain containing 3
mm39_v1_chr18_+_69633741_69634029	1.3249	Hoxa4	ENSMUST00000207214.2|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000201094.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000200703.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000202765.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4
mm39_v1_chr12_+_38833454_38833482	1.3002	Hoxa4	ENSMUST00000161980.8|Etv1|ENSMUSG00000004151.18|ets variant 1	ENSMUST00000160701.8|Etv1|ENSMUSG00000004151.18|ets variant 1
mm39_v1_chr10_+_4561974_4562075	1.23228	Hoxa4	ENSMUST00000105590.8|Esr1|ENSMUSG00000019768.17|estrogen receptor 1 (alpha)	ENSMUST00000067086.14|Esr1|ENSMUSG00000019768.17|estrogen receptor 1 (alpha)
mm39_v1_chr4_+_119671688_119671723	1.2122	Hoxa4	ENSMUST00000106307.9|Hivep3|ENSMUSG00000028634.18|human immunodeficiency virus type I enhancer binding protein 3
mm39_v1_chr10_+_84591919_84591948	1.20457	Hoxa4	ENSMUST00000060397.13|Rfx4|ENSMUSG00000020037.16|regulatory factor X, 4 (influences HLA class II expression)
mm39_v1_chr10_-_79744726_79744770	1.18456	Hoxa4	ENSMUST00000165684.8|Med16|ENSMUSG00000013833.16|mediator complex subunit 16	ENSMUST00000164705.8|Med16|ENSMUSG00000013833.16|mediator complex subunit 16	ENSMUST00000105378.9|Med16|ENSMUSG00000013833.16|mediator complex subunit 16	ENSMUST00000170409.2|Med16|ENSMUSG00000013833.16|mediator complex subunit 16
mm39_v1_chr14_+_47069582_47069623	1.18342	Hoxa4	ENSMUST00000068532.10|Cgrrf1|ENSMUSG00000055128.16|cell growth regulator with ring finger domain 1
mm39_v1_chr6_+_132779781_132779781	1.17143	Hoxa4	ENSMUST00000068302.4|Tas2r117|ENSMUSG00000058349.3|taste receptor, type 2, member 117
mm39_v1_chr10_+_127256993_127257073	1.1267	Hoxa4	ENSMUST00000170336.8|R3hdm2|ENSMUSG00000025404.16|R3H domain containing 2
mm39_v1_chr3_+_95071617_95071685	1.12384	Hoxa4	ENSMUST00000168321.8|Sema6c|ENSMUSG00000038777.20|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	ENSMUST00000107217.6|Sema6c|ENSMUSG00000038777.20|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	ENSMUST00000202315.3|Sema6c|ENSMUSG00000038777.20|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
mm39_v1_chr11_+_67061837_67061866	1.12253	Hoxa4	ENSMUST00000170159.8|Myh2|ENSMUSG00000033196.18|myosin, heavy polypeptide 2, skeletal muscle, adult
mm39_v1_chr11_+_73489420_73489420	1.1113	Hoxa4	ENSMUST00000214228.2|Olfr384|ENSMUSG00000060335.3|olfactory receptor 384
mm39_v1_chr13_+_112454981_112454992	1.08259	Hoxa4	ENSMUST00000223871.2|Ankrd55|ENSMUSG00000049985.16|ankyrin repeat domain 55
mm39_v1_chr1_+_74324089_74324231	1.07375	Hoxa4	ENSMUST00000113805.8|Pnkd|ENSMUSG00000026179.15|paroxysmal nonkinesiogenic dyskinesia	ENSMUST00000027370.13|Pnkd|ENSMUSG00000026179.15|paroxysmal nonkinesiogenic dyskinesia	ENSMUST00000087226.11|Pnkd|ENSMUSG00000026179.15|paroxysmal nonkinesiogenic dyskinesia
mm39_v1_chr17_+_28076209_28076222	1.06361	Hoxa4	ENSMUST00000130810.2|Uhrf1bp1|ENSMUSG00000039512.13|UHRF1 (ICBP90) binding protein 1
mm39_v1_chr18_+_44403169_44403203	1.06047	Hoxa4	ENSMUST00000042747.4|Npy6r|ENSMUSG00000038071.4|neuropeptide Y receptor Y6
mm39_v1_chr16_-_22676264_22676419	1.04871	Hoxa4	ENSMUST00000232075.2|Tbccd1|ENSMUSG00000004462.8|TBCC domain containing 1	ENSMUST00000004576.8|Tbccd1|ENSMUSG00000004462.8|TBCC domain containing 1
mm39_v1_chrX_-_149597261_149597341	1.03833	Hoxa4	ENSMUST00000026302.13|Maged2|ENSMUSG00000025268.16|MAGE family member D2	ENSMUST00000129768.8|Maged2|ENSMUSG00000025268.16|MAGE family member D2	ENSMUST00000112699.9|Maged2|ENSMUSG00000025268.16|MAGE family member D2
mm39_v1_chr14_+_52222283_52222428	1.022	Hoxa4	ENSMUST00000093813.12|Arhgef40|ENSMUSG00000004562.17|Rho guanine nucleotide exchange factor (GEF) 40	ENSMUST00000100639.11|Arhgef40|ENSMUSG00000004562.17|Rho guanine nucleotide exchange factor (GEF) 40	ENSMUST00000182909.8|Arhgef40|ENSMUSG00000004562.17|Rho guanine nucleotide exchange factor (GEF) 40	ENSMUST00000182760.8|Arhgef40|ENSMUSG00000004562.17|Rho guanine nucleotide exchange factor (GEF) 40	ENSMUST00000182061.8|Arhgef40|ENSMUSG00000004562.17|Rho guanine nucleotide exchange factor (GEF) 40	ENSMUST00000182193.2|Arhgef40|ENSMUSG00000004562.17|Rho guanine nucleotide exchange factor (GEF) 40
mm39_v1_chrX_+_156481906_156482009	1.01118	Hoxa4	ENSMUST00000136141.2|Smpx|ENSMUSG00000041476.13|small muscle protein, X-linked	ENSMUST00000190091.7|Smpx|ENSMUSG00000041476.13|small muscle protein, X-linked
mm39_v1_chr15_+_10249646_10249664	1.00934	Hoxa4	ENSMUST00000134410.8|Prlr|ENSMUSG00000005268.21|prolactin receptor
mm39_v1_chr3_+_93349637_93349695	1.00454	Hoxa4	ENSMUST00000064257.6|Tchh|ENSMUSG00000052415.6|trichohyalin
mm39_v1_chr19_+_24853039_24853057	1.00054	Hoxa4	ENSMUST00000073080.7|Gm10053|ENSMUSG00000058927.7|predicted gene 10053
mm39_v1_chrM_+_5319_5333	0.955966	Hoxa4	ENSMUST00000082402.1|mt-Co1|ENSMUSG00000064351.1|mitochondrially encoded cytochrome c oxidase I
mm39_v1_chr11_+_31823096_31823275	0.927428	Hoxa4	ENSMUST00000155278.2|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4
mm39_v1_chr5_+_73648368_73648452	0.911885	Hoxa4	ENSMUST00000113558.8|Dcun1d4|ENSMUSG00000051674.16|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	ENSMUST00000063882.12|Dcun1d4|ENSMUSG00000051674.16|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
mm39_v1_chr2_-_115895528_115895614	0.889883	Hoxa4	ENSMUST00000028639.13|Meis2|ENSMUSG00000027210.21|Meis homeobox 2	ENSMUST00000102538.11|Meis2|ENSMUSG00000027210.21|Meis homeobox 2
mm39_v1_chr3_-_64415106_64415106	0.877576	Hoxa4	ENSMUST00000170270.3|Vmn2r5|ENSMUSG00000068999.14|vomeronasal 2, receptor 5
mm39_v1_chr6_+_106746081_106746136	0.823334	Hoxa4	ENSMUST00000113247.8|Trnt1|ENSMUSG00000013736.17|tRNA nucleotidyl transferase, CCA-adding, 1	ENSMUST00000113249.8|Trnt1|ENSMUSG00000013736.17|tRNA nucleotidyl transferase, CCA-adding, 1	ENSMUST00000113248.4|Trnt1|ENSMUSG00000013736.17|tRNA nucleotidyl transferase, CCA-adding, 1	ENSMUST00000057578.16|Trnt1|ENSMUSG00000013736.17|tRNA nucleotidyl transferase, CCA-adding, 1
mm39_v1_chr15_-_77840856_77840927	0.812676	Hoxa4	ENSMUST00000117725.2|Foxred2|ENSMUSG00000016552.14|FAD-dependent oxidoreductase domain containing 2	ENSMUST00000016696.13|Foxred2|ENSMUSG00000016552.14|FAD-dependent oxidoreductase domain containing 2
mm39_v1_chr3_+_41519355_41519369	0.780565	Hoxa4	ENSMUST00000191952.2|Jade1|ENSMUSG00000025764.15|jade family PHD finger 1
mm39_v1_chr10_+_18345706_18345729	0.765373	Hoxa4	ENSMUST00000162891.8|Nhsl1|ENSMUSG00000039835.17|NHS-like 1	ENSMUST00000100054.4|Nhsl1|ENSMUSG00000039835.17|NHS-like 1
mm39_v1_chr7_-_119744509_119744515	0.759962	Hoxa4	ENSMUST00000208874.2|Zp2|ENSMUSG00000030911.8|zona pellucida glycoprotein 2	ENSMUST00000033207.6|Zp2|ENSMUSG00000030911.8|zona pellucida glycoprotein 2
mm39_v1_chr10_-_13264574_13264714	0.750563	Hoxa4	ENSMUST00000079698.7|Phactr2|ENSMUSG00000062866.17|phosphatase and actin regulator 2
mm39_v1_chr11_-_74228504_74228504	0.732383	Hoxa4	ENSMUST00000213831.2|Olfr410|ENSMUSG00000063116.5|olfactory receptor 410
mm39_v1_chr1_+_17797257_17797312	0.727242	Hoxa4	ENSMUST00000159958.8|Crispld1|ENSMUSG00000025776.14|cysteine-rich secretory protein LCCL domain containing 1	ENSMUST00000160305.8|Crispld1|ENSMUSG00000025776.14|cysteine-rich secretory protein LCCL domain containing 1	ENSMUST00000095075.5|Crispld1|ENSMUSG00000025776.14|cysteine-rich secretory protein LCCL domain containing 1
mm39_v1_chr2_-_6889685_6889782	0.722425	Hoxa4	ENSMUST00000183091.8|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2	ENSMUST00000182851.8|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2
mm39_v1_chr14_-_20718337_20718422	0.713121	Hoxa4	ENSMUST00000057090.12|Synpo2l|ENSMUSG00000039376.14|synaptopodin 2-like	ENSMUST00000117386.2|Synpo2l|ENSMUSG00000039376.14|synaptopodin 2-like
mm39_v1_chr15_+_28203872_28203898	0.707391	Hoxa4	ENSMUST00000067048.8|Dnah5|ENSMUSG00000022262.9|dynein, axonemal, heavy chain 5
mm39_v1_chr2_+_36955758_36955758	0.706964	Hoxa4	ENSMUST00000216706.3|Olfr360|ENSMUSG00000083361.5|olfactory receptor 360
mm39_v1_chr7_-_136915602_136915715	0.691313	Hoxa4	ENSMUST00000210774.2|Ebf3|ENSMUSG00000010476.15|early B cell factor 3
mm39_v1_chr9_-_65792306_65792350	0.668831	Hoxa4	ENSMUST00000122410.8|Trip4|ENSMUSG00000032386.16|thyroid hormone receptor interactor 4	ENSMUST00000117083.2|Trip4|ENSMUSG00000032386.16|thyroid hormone receptor interactor 4
mm39_v1_chr11_-_30936326_30936375	0.659771	Hoxa4	ENSMUST00000020553.5|Chac2|ENSMUSG00000020309.7|ChaC, cation transport regulator 2	ENSMUST00000101394.5|Chac2|ENSMUSG00000020309.7|ChaC, cation transport regulator 2
mm39_v1_chr9_+_39903409_39903409	0.646723	Hoxa4	ENSMUST00000217600.2|Olfr978|ENSMUSG00000044292.5|olfactory receptor 978
mm39_v1_chr14_-_30213408_30213413	0.643621	Hoxa4	ENSMUST00000112250.6|Cacna1d|ENSMUSG00000015968.19|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm39_v1_chr3_-_89905547_89905696	0.632576	Hoxa4	ENSMUST00000199740.2|Hax1|ENSMUSG00000027944.14|HCLS1 associated X-1	ENSMUST00000198782.2|Hax1|ENSMUSG00000027944.14|HCLS1 associated X-1
mm39_v1_chr13_+_22656093_22656186	0.604544	Hoxa4	ENSMUST00000226330.2|Vmn1r201|ENSMUSG00000094898.3|vomeronasal 1 receptor 201	ENSMUST00000226965.2|Vmn1r201|ENSMUSG00000094898.3|vomeronasal 1 receptor 201
mm39_v1_chrX_+_149372903_149372993	0.594311	Hoxa4	ENSMUST00000080884.11|Pfkfb1|ENSMUSG00000025271.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
mm39_v1_chr19_-_5660057_5660100	0.588896	Hoxa4	ENSMUST00000236229.2|Kat5|ENSMUSG00000024926.11|K(lysine) acetyltransferase 5	ENSMUST00000235701.2|Kat5|ENSMUSG00000024926.11|K(lysine) acetyltransferase 5	ENSMUST00000236264.2|Kat5|ENSMUSG00000024926.11|K(lysine) acetyltransferase 5
mm39_v1_chr16_-_76170714_76170741	0.58807	Hoxa4	ENSMUST00000231585.2|Nrip1|ENSMUSG00000048490.15|nuclear receptor interacting protein 1	ENSMUST00000121927.8|Nrip1|ENSMUSG00000048490.15|nuclear receptor interacting protein 1
mm39_v1_chrX_-_105647282_105647292	0.582515	Hoxa4	ENSMUST00000113480.2|Cysltr1|ENSMUSG00000052821.4|cysteinyl leukotriene receptor 1
mm39_v1_chr2_-_6889783_6889807	0.572735	Hoxa4	ENSMUST00000170438.8|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2	ENSMUST00000114924.10|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2	ENSMUST00000114934.11|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2
mm39_v1_chr6_+_40941688_40941715	0.568045	Hoxa4	ENSMUST00000076638.7|1810009J06Rik|ENSMUSG00000094808.3|RIKEN cDNA 1810009J06 gene
mm39_v1_chr12_+_65122355_65122389	0.554751	Hoxa4	ENSMUST00000058889.5|Fancm|ENSMUSG00000055884.9|Fanconi anemia, complementation group M
mm39_v1_chr10_+_127257077_127257104	0.519749	Hoxa4	ENSMUST00000168780.8|R3hdm2|ENSMUSG00000025404.16|R3H domain containing 2
mm39_v1_chr1_-_92412835_92412835	0.517091	Hoxa4	ENSMUST00000214928.3|Olfr1416|ENSMUSG00000067064.5|olfactory receptor 1416
mm39_v1_chr8_+_4288815_4288886	0.493993	Hoxa4	ENSMUST00000003027.14|Map2k7|ENSMUSG00000002948.20|mitogen-activated protein kinase kinase 7	ENSMUST00000110999.8|Map2k7|ENSMUSG00000002948.20|mitogen-activated protein kinase kinase 7
mm39_v1_chr10_+_101994841_101994940	0.483015	Hoxa4	ENSMUST00000020039.13|Mgat4c|ENSMUSG00000019888.17|MGAT4 family, member C
mm39_v1_chr10_-_126956991_126957019	0.471764	Hoxa4	ENSMUST00000080975.6|Os9|ENSMUSG00000040462.14|amplified in osteosarcoma	ENSMUST00000164259.9|Os9|ENSMUSG00000040462.14|amplified in osteosarcoma
mm39_v1_chr16_-_58848290_58848290	0.470921	Hoxa4	ENSMUST00000062380.3|Olfr186|ENSMUSG00000047960.5|olfactory receptor 186
mm39_v1_chr2_-_109111064_109111112	0.440201	Hoxa4	ENSMUST00000147770.2|Mettl15|ENSMUSG00000057234.10|methyltransferase like 15
mm39_v1_chr7_-_102267425_102267425	0.428112	Hoxa4	ENSMUST00000216776.2|Olfr553|ENSMUSG00000073972.3|olfactory receptor 553
mm39_v1_chr6_+_132739094_132739094	0.421495	Hoxa4	ENSMUST00000069268.3|Tas2r102|ENSMUSG00000056901.2|taste receptor, type 2, member 102
mm39_v1_chr7_+_139753130_139753226	0.419405	Hoxa4	ENSMUST00000209314.3|Olfr523|ENSMUSG00000051051.8|olfactory receptor 523	ENSMUST00000213953.2|Olfr523|ENSMUSG00000051051.8|olfactory receptor 523	ENSMUST00000214272.2|Olfr523|ENSMUSG00000051051.8|olfactory receptor 523	ENSMUST00000215785.2|Olfr523|ENSMUSG00000051051.8|olfactory receptor 523	ENSMUST00000216023.2|Olfr523|ENSMUSG00000051051.8|olfactory receptor 523
mm39_v1_chr2_-_111779785_111779785	0.403189	Hoxa4	ENSMUST00000099604.6|Olfr1307|ENSMUSG00000094747.4|olfactory receptor 1307
mm39_v1_chr10_+_73782857_73782903	0.385541	Hoxa4	ENSMUST00000191709.6|Pcdh15|ENSMUSG00000052613.17|protocadherin 15	ENSMUST00000193739.6|Pcdh15|ENSMUSG00000052613.17|protocadherin 15	ENSMUST00000195531.6|Pcdh15|ENSMUSG00000052613.17|protocadherin 15
mm39_v1_chr2_+_124452493_124452534	0.374699	Hoxa4	ENSMUST00000103239.10|Sema6d|ENSMUSG00000027200.18|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	ENSMUST00000103240.9|Sema6d|ENSMUSG00000027200.18|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm39_v1_chr5_-_137312424_137312474	0.361152	Hoxa4	ENSMUST00000199121.2|Trip6|ENSMUSG00000023348.12|thyroid hormone receptor interactor 6
mm39_v1_chr11_-_74228857_74228857	0.356286	Hoxa4	ENSMUST00000214490.2|Olfr410|ENSMUSG00000063116.5|olfactory receptor 410
mm39_v1_chr8_+_11608412_11608434	0.355915	Hoxa4	ENSMUST00000209565.2|Ing1|ENSMUSG00000045969.9|inhibitor of growth family, member 1
mm39_v1_chr1_+_100025486_100025486	0.350698	Hoxa4	ENSMUST00000188735.2|Cntnap5b|ENSMUSG00000067028.12|contactin associated protein-like 5B
mm39_v1_chr11_-_73781597_73781597	0.350385	Hoxa4	ENSMUST00000216608.2|Olfr394|ENSMUSG00000056921.3|olfactory receptor 394	ENSMUST00000214284.2|Olfr394|ENSMUSG00000056921.3|olfactory receptor 394
mm39_v1_chr9_-_37627519_37627546	0.342912	Hoxa4	ENSMUST00000215727.2|Olfr160|ENSMUSG00000061165.10|olfactory receptor 160	ENSMUST00000211952.3|Olfr160|ENSMUSG00000061165.10|olfactory receptor 160
mm39_v1_chr2_-_93680024_93680182	0.336755	Hoxa4	ENSMUST00000068513.11|Accs|ENSMUSG00000040272.15|1-aminocyclopropane-1-carboxylate synthase (non-functional)	ENSMUST00000041593.15|Accs|ENSMUSG00000040272.15|1-aminocyclopropane-1-carboxylate synthase (non-functional)	ENSMUST00000130077.2|Accs|ENSMUSG00000040272.15|1-aminocyclopropane-1-carboxylate synthase (non-functional)
mm39_v1_chr16_-_19443851_19443851	0.335368	Hoxa4	ENSMUST00000079891.4|Olfr171|ENSMUSG00000060480.6|olfactory receptor 171
mm39_v1_chr7_+_112341233_112341268	0.325093	Hoxa4	ENSMUST00000164363.9|Tead1|ENSMUSG00000055320.19|TEA domain family member 1
mm39_v1_chr1_-_92423800_92423823	0.324097	Hoxa4	ENSMUST00000204766.2|Olfr1415|ENSMUSG00000057464.5|olfactory receptor 1415	ENSMUST00000204009.3|Olfr1415|ENSMUSG00000057464.5|olfactory receptor 1415
mm39_v1_chr17_+_20950105_20950105	0.303273	Hoxa4	ENSMUST00000233597.2|Vmn1r227|ENSMUSG00000067951.6|vomeronasal 1 receptor 227	ENSMUST00000232943.2|Vmn1r227|ENSMUSG00000067951.6|vomeronasal 1 receptor 227	ENSMUST00000179914.3|Vmn1r227|ENSMUSG00000067951.6|vomeronasal 1 receptor 227
mm39_v1_chr11_+_21522221_21522235	0.297847	Hoxa4	ENSMUST00000131135.3|Wdpcp|ENSMUSG00000020319.10|WD repeat containing planar cell polarity effector	ENSMUST00000020568.10|Wdpcp|ENSMUSG00000020319.10|WD repeat containing planar cell polarity effector
mm39_v1_chr2_+_37029334_37029387	0.294964	Hoxa4	ENSMUST00000214905.2|Olfr364-ps1|ENSMUSG00000078198.3|olfactory receptor 364, pseudogene 1	ENSMUST00000217298.2|Olfr364-ps1|ENSMUSG00000078198.3|olfactory receptor 364, pseudogene 1	ENSMUST00000104995.3|Olfr364-ps1|ENSMUSG00000078198.3|olfactory receptor 364, pseudogene 1
mm39_v1_chr7_+_103593644_103593644	0.292988	Hoxa4	ENSMUST00000216006.2|Olfr633|ENSMUSG00000073937.3|olfactory receptor 633
mm39_v1_chr1_-_14374794_14374833	0.291704	Hoxa4	ENSMUST00000190337.7|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1
mm39_v1_chr12_+_59176543_59176604	0.291522	Hoxa4	ENSMUST00000069430.15|Mia2|ENSMUSG00000021000.18|MIA SH3 domain ER export factor 2	ENSMUST00000177370.8|Mia2|ENSMUSG00000021000.18|MIA SH3 domain ER export factor 2
mm39_v1_chr7_+_104263162_104263162	0.263977	Hoxa4	ENSMUST00000215575.3|Olfr656|ENSMUSG00000073924.6|olfactory receptor 656
mm39_v1_chr1_-_163141278_163141281	0.240892	Hoxa4	ENSMUST00000027878.14|Prrx1|ENSMUSG00000026586.17|paired related homeobox 1
mm39_v1_chr4_-_118037240_118037251	0.237811	Hoxa4	ENSMUST00000106406.9|Kdm4a|ENSMUSG00000033326.16|lysine (K)-specific demethylase 4A
mm39_v1_chr14_+_52686805_52686805	0.232243	Hoxa4	ENSMUST00000206437.2|Olfr1509|ENSMUSG00000035626.5|olfactory receptor 1509
mm39_v1_chr16_-_58910185_58910185	0.225914	Hoxa4	ENSMUST00000215647.2|Olfr191|ENSMUSG00000094539.4|olfactory receptor 191
mm39_v1_chrX_+_132751729_132751878	0.220976	Hoxa4	ENSMUST00000033602.9|Tnmd|ENSMUSG00000031250.9|tenomodulin
mm39_v1_chr19_+_31846154_31846187	0.218938	Hoxa4	ENSMUST00000224564.2|A1cf|ENSMUSG00000052595.9|APOBEC1 complementation factor	ENSMUST00000224304.2|A1cf|ENSMUSG00000052595.9|APOBEC1 complementation factor	ENSMUST00000075838.8|A1cf|ENSMUSG00000052595.9|APOBEC1 complementation factor	ENSMUST00000224400.2|A1cf|ENSMUSG00000052595.9|APOBEC1 complementation factor
mm39_v1_chr5_+_115373895_115373895	0.208706	Hoxa4	ENSMUST00000081497.13|Pop5|ENSMUSG00000060152.15|processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
mm39_v1_chr1_-_14374842_14374908	0.196814	Hoxa4	ENSMUST00000188857.7|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1	ENSMUST00000185453.7|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1
mm39_v1_chr12_-_86125793_86125815	0.192657	Hoxa4	ENSMUST00000003687.8|Tgfb3|ENSMUSG00000021253.8|transforming growth factor, beta 3
mm39_v1_chr9_-_96993169_96993214	0.179355	Hoxa4	ENSMUST00000085206.11|Slc25a36|ENSMUSG00000032449.14|solute carrier family 25, member 36
mm39_v1_chr6_+_43150886_43150886	0.179251	Hoxa4	ENSMUST00000059512.5|Olfr13|ENSMUSG00000043605.6|olfactory receptor 13
mm39_v1_chr12_-_83609217_83609241	0.158985	Hoxa4	ENSMUST00000222448.2|Zfyve1|ENSMUSG00000042628.9|zinc finger, FYVE domain containing 1
mm39_v1_chr16_-_59166089_59166089	0.153438	Hoxa4	ENSMUST00000084791.4|Olfr206|ENSMUSG00000066257.5|olfactory receptor 206
mm39_v1_chr6_+_54017063_54017077	0.151864	Hoxa4	ENSMUST00000127323.3|Chn2|ENSMUSG00000004633.18|chimerin 2
mm39_v1_chr3_+_96552895_96552924	0.143264	Hoxa4	ENSMUST00000119365.8|Itga10|ENSMUSG00000090210.8|integrin, alpha 10	ENSMUST00000029744.6|Itga10|ENSMUSG00000090210.8|integrin, alpha 10
mm39_v1_chr10_-_129463803_129463803	0.129734	Hoxa4	ENSMUST00000204979.3|Olfr798|ENSMUSG00000095002.4|olfactory receptor 798
mm39_v1_chr10_+_87694924_87694935	0.123615	Hoxa4	ENSMUST00000095360.11|Igf1|ENSMUSG00000020053.19|insulin-like growth factor 1
mm39_v1_chr3_-_61273228_61273372	0.119359	Hoxa4	ENSMUST00000066298.3|B430305J03Rik|ENSMUSG00000053706.3|RIKEN cDNA B430305J03 gene
mm39_v1_chr6_-_133032779_133032779	0.117627	Hoxa4	ENSMUST00000095391.3|Tas2r140|ENSMUSG00000071147.3|taste receptor, type 2, member 140
mm39_v1_chr8_-_11329656_11329692	0.117591	Hoxa4	ENSMUST00000208095.2|Col4a1|ENSMUSG00000031502.12|collagen, type IV, alpha 1
mm39_v1_chr2_+_111120973_111120973	0.117051	Hoxa4	ENSMUST00000213727.2|Olfr1278|ENSMUSG00000068647.3|olfactory receptor 1278
mm39_v1_chr4_+_116544509_116544526	0.113644	Hoxa4	ENSMUST00000030454.6|Prdx1|ENSMUSG00000028691.13|peroxiredoxin 1
mm39_v1_chr7_+_130467486_130467542	0.0980783	Hoxa4	ENSMUST00000120441.8|Plekha1|ENSMUSG00000040268.18|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
mm39_v1_chr18_+_36797113_36797177	0.0919237	Hoxa4	ENSMUST00000036765.8|Eif4ebp3|ENSMUSG00000090264.2|eukaryotic translation initiation factor 4E binding protein 3
mm39_v1_chr17_+_43978280_43978316	0.0814493	Hoxa4	ENSMUST00000170988.2|Cyp39a1|ENSMUSG00000023963.11|cytochrome P450, family 39, subfamily a, polypeptide 1
mm39_v1_chr6_-_56878854_56878876	0.0688397	Hoxa4	ENSMUST00000101367.9|Nt5c3|ENSMUSG00000029780.15|5'-nucleotidase, cytosolic III
mm39_v1_chr18_-_42712717_42712856	0.0319815	Hoxa4	ENSMUST00000054738.5|Gpr151|ENSMUSG00000042816.5|G protein-coupled receptor 151
mm39_v1_chr4_-_52919172_52919178	0.0239351	Hoxa4	ENSMUST00000107667.3|Olfr272|ENSMUSG00000051593.5|olfactory receptor 272	ENSMUST00000213989.2|Olfr272|ENSMUSG00000051593.5|olfactory receptor 272
mm39_v1_chr11_+_49313894_49313962	0.00222445	Hoxa4	ENSMUST00000216641.2|Olfr1389|ENSMUSG00000107573.3|olfactory receptor 1389	ENSMUST00000217595.2|Olfr1389|ENSMUSG00000107573.3|olfactory receptor 1389
