mm39_v1_chr9_-_44714263_44714369	9.10206	Hoxa6	ENSMUST00000044694.8|Ttc36|ENSMUSG00000039438.8|tetratricopeptide repeat domain 36
mm39_v1_chr6_-_52203146_52203176	7.85702	Hoxa6	ENSMUST00000114425.3|Hoxa9|ENSMUSG00000038227.16|homeobox A9
mm39_v1_chr7_-_37472979_37473066	7.48373	Hoxa6	ENSMUST00000176534.8|Zfp536|ENSMUSG00000043456.18|zinc finger protein 536
mm39_v1_chr2_-_74489763_74489901	5.93982	Hoxa6	ENSMUST00000173623.2|Evx2|ENSMUSG00000001815.16|even-skipped homeobox 2	ENSMUST00000001867.13|Evx2|ENSMUSG00000001815.16|even-skipped homeobox 2
mm39_v1_chr13_+_94954202_94954242	5.81113	Hoxa6	ENSMUST00000220825.2|Tbca|ENSMUSG00000042043.7|tubulin cofactor A
mm39_v1_chr11_+_96173355_96173382	4.89453	Hoxa6	ENSMUST00000125410.2|Hoxb8|ENSMUSG00000056648.6|homeobox B8
mm39_v1_chr14_+_26722319_26722463	4.82679	Hoxa6	ENSMUST00000035433.10|Hesx1|ENSMUSG00000040726.11|homeobox gene expressed in ES cells
mm39_v1_chr4_-_49408040_49408151	4.66318	Hoxa6	ENSMUST00000081541.9|Acnat2|ENSMUSG00000060317.10|acyl-coenzyme A amino acid N-acyltransferase 2
mm39_v1_chr12_-_104439589_104439633	4.6203	Hoxa6	ENSMUST00000021513.6|Gsc|ENSMUSG00000021095.6|goosecoid homeobox
mm39_v1_chr8_-_5155347_5155358	4.50215	Hoxa6	ENSMUST00000023835.3|Slc10a2|ENSMUSG00000023073.3|solute carrier family 10, member 2
mm39_v1_chr4_+_99184137_99184137	4.31132	Hoxa6	ENSMUST00000094955.3|Gm12689|ENSMUSG00000070891.3|predicted gene 12689
mm39_v1_chr11_+_96173475_96173551	4.27527	Hoxa6	ENSMUST00000168043.2|Hoxb8|ENSMUSG00000056648.6|homeobox B8
mm39_v1_chr5_+_90608751_90608767	4.26923	Hoxa6	ENSMUST00000031314.10|Alb|ENSMUSG00000029368.11|albumin
mm39_v1_chrX_+_162873183_162873197	4.23112	Hoxa6	ENSMUST00000015545.10|Cltrn|ENSMUSG00000015401.13|collectrin, amino acid transport regulator
mm39_v1_chr2_+_74528071_74528097	4.21905	Hoxa6	ENSMUST00000059272.10|Hoxd9|ENSMUSG00000043342.10|homeobox D9
mm39_v1_chr11_+_96177449_96177480	4.1292	Hoxa6	ENSMUST00000049352.8|Hoxb7|ENSMUSG00000038721.9|homeobox B7
mm39_v1_chr2_+_124994425_124994526	3.9968	Hoxa6	ENSMUST00000110494.9|Slc12a1|ENSMUSG00000027202.13|solute carrier family 12, member 1	ENSMUST00000110495.3|Slc12a1|ENSMUSG00000027202.13|solute carrier family 12, member 1	ENSMUST00000028630.9|Slc12a1|ENSMUSG00000027202.13|solute carrier family 12, member 1
mm39_v1_chr13_+_55547498_55547513	3.92945	Hoxa6	ENSMUST00000057167.9|Slc34a1|ENSMUSG00000021490.12|solute carrier family 34 (sodium phosphate), member 1
mm39_v1_chr11_+_96162283_96162349	3.89072	Hoxa6	ENSMUST00000000010.9|Hoxb9|ENSMUSG00000020875.10|homeobox B9	ENSMUST00000174042.3|Hoxb9|ENSMUSG00000020875.10|homeobox B9
mm39_v1_chr1_+_19173246_19173267	3.80757	Hoxa6	ENSMUST00000037294.8|Tfap2d|ENSMUSG00000042596.8|transcription factor AP-2, delta
mm39_v1_chr1_+_19282278_19282330	3.79552	Hoxa6	ENSMUST00000064976.6|Tfap2b|ENSMUSG00000025927.14|transcription factor AP-2 beta
mm39_v1_chr6_-_16898440_16898475	3.69963	Hoxa6	ENSMUST00000031533.11|Tfec|ENSMUSG00000029553.11|transcription factor EC
mm39_v1_chr12_-_25147139_25147282	3.60049	Hoxa6	ENSMUST00000221761.2|Id2|ENSMUSG00000020644.10|inhibitor of DNA binding 2
mm39_v1_chr2_+_70305267_70305267	3.57165	Hoxa6	ENSMUST00000100043.3|Sp5|ENSMUSG00000075304.3|trans-acting transcription factor 5
mm39_v1_chr6_+_15185202_15185223	3.42387	Hoxa6	ENSMUST00000154448.2|Foxp2|ENSMUSG00000029563.17|forkhead box P2
mm39_v1_chr16_+_42727926_42728047	3.33582	Hoxa6	ENSMUST00000151244.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20	ENSMUST00000114694.9|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chr11_+_96183294_96183334	3.26175	Hoxa6	ENSMUST00000173432.3|Hoxb6|ENSMUSG00000000690.6|homeobox B6
mm39_v1_chr1_-_165762469_165762605	3.24093	Hoxa6	ENSMUST00000069609.12|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000111427.9|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000111426.11|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1
mm39_v1_chr9_-_71070506_71070572	3.19516	Hoxa6	ENSMUST00000074465.9|Aqp9|ENSMUSG00000032204.14|aquaporin 9
mm39_v1_chr14_-_118289557_118289597	3.18011	Hoxa6	ENSMUST00000022725.4|Dct|ENSMUSG00000022129.5|dopachrome tautomerase
mm39_v1_chr5_+_104447037_104447162	3.17602	Hoxa6	ENSMUST00000031246.9|Ibsp|ENSMUSG00000029306.9|integrin binding sialoprotein
mm39_v1_chr19_+_55882942_55882966	3.15436	Hoxa6	ENSMUST00000142291.8|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box
mm39_v1_chr11_+_31822211_31822263	3.14428	Hoxa6	ENSMUST00000020543.13|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4	ENSMUST00000109412.9|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4
mm39_v1_chr4_-_21685781_21685805	3.12127	Hoxa6	ENSMUST00000076206.11|Prdm13|ENSMUSG00000040478.15|PR domain containing 13
mm39_v1_chr2_+_153334710_153334710	3.11301	Hoxa6	ENSMUST00000109783.2|4930404H24Rik|ENSMUSG00000079001.2|RIKEN cDNA 4930404H24 gene
mm39_v1_chr1_+_6800275_6800341	3.10437	Hoxa6	ENSMUST00000043578.13|St18|ENSMUSG00000033740.18|suppression of tumorigenicity 18	ENSMUST00000139756.8|St18|ENSMUSG00000033740.18|suppression of tumorigenicity 18	ENSMUST00000131467.8|St18|ENSMUSG00000033740.18|suppression of tumorigenicity 18	ENSMUST00000150761.8|St18|ENSMUSG00000033740.18|suppression of tumorigenicity 18	ENSMUST00000151281.8|St18|ENSMUSG00000033740.18|suppression of tumorigenicity 18
mm39_v1_chr4_+_114678919_114678919	3.07014	Hoxa6	ENSMUST00000137570.2|Gm12830|ENSMUSG00000055198.4|predicted gene 12830
mm39_v1_chr19_-_45224251_45224251	3.06199	Hoxa6	ENSMUST00000099401.6|Lbx1|ENSMUSG00000025216.10|ladybird homeobox 1
mm39_v1_chr19_+_56276375_56276428	3.00483	Hoxa6	ENSMUST00000166049.8|Habp2|ENSMUSG00000025075.15|hyaluronic acid binding protein 2
mm39_v1_chr10_+_52267702_52267706	2.99897	Hoxa6	ENSMUST00000067085.7|Nepn|ENSMUSG00000038624.14|nephrocan
mm39_v1_chr7_-_115637970_115637985	2.98054	Hoxa6	ENSMUST00000166877.8|Sox6|ENSMUSG00000051910.14|SRY (sex determining region Y)-box 6
mm39_v1_chr7_+_51537645_51537688	2.93653	Hoxa6	ENSMUST00000208711.2|Gas2|ENSMUSG00000030498.16|growth arrest specific 2
mm39_v1_chr7_+_49559859_49559894	2.89847	Hoxa6	ENSMUST00000056442.12|Slc6a5|ENSMUSG00000039728.16|solute carrier family 6 (neurotransmitter transporter, glycine), member 5
mm39_v1_chr9_+_44309727_44309771	2.7858	Hoxa6	ENSMUST00000213268.2|Slc37a4|ENSMUSG00000032114.10|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm39_v1_chr5_-_67256578_67256644	2.77835	Hoxa6	ENSMUST00000012664.11|Phox2b|ENSMUSG00000012520.11|paired-like homeobox 2b
mm39_v1_chr6_+_15184630_15184661	2.77781	Hoxa6	ENSMUST00000115470.3|Foxp2|ENSMUSG00000029563.17|forkhead box P2
mm39_v1_chr5_+_90666791_90666815	2.74618	Hoxa6	ENSMUST00000113179.9|Afm|ENSMUSG00000029369.18|afamin	ENSMUST00000128740.2|Afm|ENSMUSG00000029369.18|afamin
mm39_v1_chr2_+_9887427_9887455	2.74421	Hoxa6	ENSMUST00000114919.2|4930412O13Rik|ENSMUSG00000025783.3|RIKEN cDNA 4930412O13 gene
mm39_v1_chr17_-_45125537_45125684	2.71259	Hoxa6	ENSMUST00000113571.10|Runx2|ENSMUSG00000039153.18|runt related transcription factor 2
mm39_v1_chr5_-_67256388_67256406	2.69335	Hoxa6	ENSMUST00000174251.2|Phox2b|ENSMUSG00000012520.11|paired-like homeobox 2b
mm39_v1_chr6_-_50631418_50631427	2.66	Hoxa6	ENSMUST00000031853.8|Npvf|ENSMUSG00000029831.8|neuropeptide VF precursor
mm39_v1_chr2_-_18053595_18053634	2.61639	Hoxa6	ENSMUST00000142856.2|Skida1|ENSMUSG00000054074.10|SKI/DACH domain containing 1
mm39_v1_chr14_+_32321341_32321498	2.49532	Hoxa6	ENSMUST00000187377.7|Prrxl1|ENSMUSG00000041730.15|paired related homeobox protein-like 1	ENSMUST00000189022.8|Prrxl1|ENSMUSG00000041730.15|paired related homeobox protein-like 1	ENSMUST00000186452.7|Prrxl1|ENSMUSG00000041730.15|paired related homeobox protein-like 1
mm39_v1_chr7_-_115459082_115459098	2.48338	Hoxa6	ENSMUST00000206123.2|Sox6|ENSMUSG00000051910.14|SRY (sex determining region Y)-box 6
mm39_v1_chr14_-_48900192_48900329	2.48291	Hoxa6	ENSMUST00000122009.8|Otx2|ENSMUSG00000021848.17|orthodenticle homeobox 2
mm39_v1_chr9_-_32452885_32452898	2.47623	Hoxa6	ENSMUST00000016231.14|Fli1|ENSMUSG00000016087.14|Friend leukemia integration 1
mm39_v1_chr13_+_95012107_95012119	2.45371	Hoxa6	ENSMUST00000022195.13|Otp|ENSMUSG00000021685.13|orthopedia homeobox
mm39_v1_chr5_+_42225303_42225303	2.36274	Hoxa6	ENSMUST00000087332.5|Gm16223|ENSMUSG00000067285.5|predicted gene 16223
mm39_v1_chr18_-_14105591_14105611	2.33966	Hoxa6	ENSMUST00000234025.2|Zfp521|ENSMUSG00000024420.10|zinc finger protein 521
mm39_v1_chr3_-_137837117_137837142	2.29592	Hoxa6	ENSMUST00000029805.13|Mttp|ENSMUSG00000028158.15|microsomal triglyceride transfer protein
mm39_v1_chr13_+_83652280_83652346	2.2778	Hoxa6	ENSMUST00000199450.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr11_+_90078485_90078516	2.25764	Hoxa6	ENSMUST00000124877.3|Gm45716|ENSMUSG00000110344.2|predicted gene 45716	ENSMUST00000153734.2|Gm45716|ENSMUSG00000110344.2|predicted gene 45716	ENSMUST00000134929.8|Gm45716|ENSMUSG00000110344.2|predicted gene 45716
mm39_v1_chr14_-_48902555_48902572	2.22405	Hoxa6	ENSMUST00000118578.9|Otx2|ENSMUSG00000021848.17|orthodenticle homeobox 2
mm39_v1_chr2_-_168608949_168608965	2.22361	Hoxa6	ENSMUST00000075044.10|Sall4|ENSMUSG00000027547.18|spalt like transcription factor 4
mm39_v1_chr19_+_26727111_26727277	2.21412	Hoxa6	ENSMUST00000175842.4|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm39_v1_chr19_+_56276343_56276371	2.15043	Hoxa6	ENSMUST00000095948.11|Habp2|ENSMUSG00000025075.15|hyaluronic acid binding protein 2
mm39_v1_chr10_+_87926932_87926939	2.14994	Hoxa6	ENSMUST00000048621.8|Pmch|ENSMUSG00000035383.8|pro-melanin-concentrating hormone
mm39_v1_chr12_-_55033113_55033128	2.1496	Hoxa6	ENSMUST00000038926.13|Baz1a|ENSMUSG00000035021.14|bromodomain adjacent to zinc finger domain 1A
mm39_v1_chr5_-_66238313_66238442	2.11093	Hoxa6	ENSMUST00000202700.4|Rbm47|ENSMUSG00000070780.12|RNA binding motif protein 47	ENSMUST00000094757.9|Rbm47|ENSMUSG00000070780.12|RNA binding motif protein 47	ENSMUST00000113724.6|Rbm47|ENSMUSG00000070780.12|RNA binding motif protein 47
mm39_v1_chr2_-_28806639_28806680	2.08424	Hoxa6	ENSMUST00000113847.3|Barhl1|ENSMUSG00000026805.15|BarH like homeobox 1
mm39_v1_chr2_+_74557418_74557545	2.05686	Hoxa6	ENSMUST00000111980.4|Hoxd4|ENSMUSG00000101174.9|homeobox D4
mm39_v1_chr10_-_45346297_45346386	2.02832	Hoxa6	ENSMUST00000079390.7|Lin28b|ENSMUSG00000063804.9|lin-28 homolog B (C. elegans)
mm39_v1_chr11_+_96214078_96214152	2.01983	Hoxa6	ENSMUST00000093944.10|Hoxb3|ENSMUSG00000048763.12|homeobox B3
mm39_v1_chr2_+_74552322_74552418	2.00253	Hoxa6	ENSMUST00000047904.4|Hoxd4|ENSMUSG00000101174.9|homeobox D4
mm39_v1_chr4_+_11579648_11579674	1.99593	Hoxa6	ENSMUST00000180239.2|Fsbp|ENSMUSG00000094595.2|fibrinogen silencer binding protein
mm39_v1_chr8_-_46747629_46747708	1.99235	Hoxa6	ENSMUST00000058636.9|Helt|ENSMUSG00000047171.9|helt bHLH transcription factor
mm39_v1_chr1_-_165830160_165830182	1.9658	Hoxa6	ENSMUST00000111429.11|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000176800.2|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000177358.8|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1
mm39_v1_chr14_+_33662976_33663011	1.96025	Hoxa6	ENSMUST00000100720.2|Gdf2|ENSMUSG00000072625.2|growth differentiation factor 2
mm39_v1_chr1_-_163141278_163141281	1.95151	Hoxa6	ENSMUST00000027878.14|Prrx1|ENSMUSG00000026586.17|paired related homeobox 1
mm39_v1_chr13_+_83652150_83652170	1.95092	Hoxa6	ENSMUST00000198199.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr6_-_138404076_138404160	1.94632	Hoxa6	ENSMUST00000203435.3|Lmo3|ENSMUSG00000030226.13|LIM domain only 3
mm39_v1_chr10_+_87695117_87695128	1.92241	Hoxa6	ENSMUST00000105300.9|Igf1|ENSMUSG00000020053.19|insulin-like growth factor 1
mm39_v1_chr18_-_81029986_81029986	1.88355	Hoxa6	ENSMUST00000057950.9|Sall3|ENSMUSG00000024565.11|spalt like transcription factor 3
mm39_v1_chr9_-_32454157_32454305	1.86333	Hoxa6	ENSMUST00000183767.2|Fli1|ENSMUSG00000016087.14|Friend leukemia integration 1
mm39_v1_chr1_+_6805048_6805100	1.8618	Hoxa6	ENSMUST00000139838.8|St18|ENSMUSG00000033740.18|suppression of tumorigenicity 18
mm39_v1_chr1_-_164988342_164988350	1.85785	Hoxa6	ENSMUST00000027859.12|Tbx19|ENSMUSG00000026572.12|T-box 19
mm39_v1_chr13_-_103901010_103901090	1.84866	Hoxa6	ENSMUST00000210489.2|Srek1|ENSMUSG00000032621.9|splicing regulatory glutamine/lysine-rich protein 1
mm39_v1_chr3_+_127426783_127426789	1.83652	Hoxa6	ENSMUST00000029587.9|Neurog2|ENSMUSG00000027967.9|neurogenin 2
mm39_v1_chr13_+_81031512_81031543	1.79489	Hoxa6	ENSMUST00000099356.10|Arrdc3|ENSMUSG00000074794.11|arrestin domain containing 3
mm39_v1_chr11_+_96242422_96242461	1.77281	Hoxa6	ENSMUST00000100523.7|Hoxb2|ENSMUSG00000075588.7|homeobox B2
mm39_v1_chr3_+_41517790_41517827	1.76787	Hoxa6	ENSMUST00000163764.8|Jade1|ENSMUSG00000025764.15|jade family PHD finger 1
mm39_v1_chr12_-_55033130_55033314	1.76214	Hoxa6	ENSMUST00000173433.8|Baz1a|ENSMUSG00000035021.14|bromodomain adjacent to zinc finger domain 1A	ENSMUST00000173803.2|Gm20403|ENSMUSG00000092233.2|predicted gene 20403
mm39_v1_chr7_-_84328553_84328609	1.73198	Hoxa6	ENSMUST00000069537.3|Zfand6|ENSMUSG00000030629.16|zinc finger, AN1-type domain 6	ENSMUST00000207865.2|Zfand6|ENSMUSG00000030629.16|zinc finger, AN1-type domain 6	ENSMUST00000178385.9|Zfand6|ENSMUSG00000030629.16|zinc finger, AN1-type domain 6	ENSMUST00000208782.2|Zfand6|ENSMUSG00000030629.16|zinc finger, AN1-type domain 6
mm39_v1_chr12_-_101784727_101784800	1.69743	Hoxa6	ENSMUST00000222587.2|Fbln5|ENSMUSG00000021186.10|fibulin 5
mm39_v1_chr4_-_35845204_35845204	1.66386	Hoxa6	ENSMUST00000164772.8|Lingo2|ENSMUSG00000045083.15|leucine rich repeat and Ig domain containing 2	ENSMUST00000065173.9|Lingo2|ENSMUSG00000045083.15|leucine rich repeat and Ig domain containing 2
mm39_v1_chr11_+_96194333_96194378	1.63518	Hoxa6	ENSMUST00000049272.5|Hoxb5|ENSMUSG00000038700.5|homeobox B5
mm39_v1_chr12_-_11258973_11258973	1.63211	Hoxa6	ENSMUST00000049877.3|Msgn1|ENSMUSG00000047002.3|mesogenin 1
mm39_v1_chr18_+_20569226_20569241	1.59996	Hoxa6	ENSMUST00000019426.5|Dsg4|ENSMUSG00000001804.10|desmoglein 4
mm39_v1_chr11_-_33153587_33153612	1.59427	Hoxa6	ENSMUST00000037746.8|Tlx3|ENSMUSG00000040610.8|T cell leukemia, homeobox 3
mm39_v1_chr10_+_42736539_42736625	1.58864	Hoxa6	ENSMUST00000157071.8|Scml4|ENSMUSG00000044770.15|Scm polycomb group protein like 4
mm39_v1_chr10_+_42736644_42736673	1.57032	Hoxa6	ENSMUST00000105495.8|Scml4|ENSMUSG00000044770.15|Scm polycomb group protein like 4
mm39_v1_chr18_+_42527604_42527640	1.56411	Hoxa6	ENSMUST00000025374.4|Pou4f3|ENSMUSG00000024497.5|POU domain, class 4, transcription factor 3
mm39_v1_chr10_-_102864904_102864915	1.55554	Hoxa6	ENSMUST00000167156.9|Alx1|ENSMUSG00000036602.15|ALX homeobox 1
mm39_v1_chr6_-_138056914_138056914	1.53399	Hoxa6	ENSMUST00000171804.4|Slc15a5|ENSMUSG00000044378.13|solute carrier family 15, member 5
mm39_v1_chr5_+_115373895_115373895	1.52203	Hoxa6	ENSMUST00000081497.13|Pop5|ENSMUSG00000060152.15|processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
mm39_v1_chr5_+_139529643_139529662	1.50021	Hoxa6	ENSMUST00000174792.2|Uncx|ENSMUSG00000029546.13|UNC homeobox
mm39_v1_chr10_-_102864921_102864977	1.4883	Hoxa6	ENSMUST00000217946.2|Alx1|ENSMUSG00000036602.15|ALX homeobox 1	ENSMUST00000219194.2|Alx1|ENSMUSG00000036602.15|ALX homeobox 1
mm39_v1_chr2_+_74566740_74566859	1.48065	Hoxa6	ENSMUST00000111982.8|Hoxd3|ENSMUSG00000079277.10|homeobox D3
mm39_v1_chr12_-_101785307_101785321	1.47486	Hoxa6	ENSMUST00000021603.9|Fbln5|ENSMUSG00000021186.10|fibulin 5
mm39_v1_chr8_+_57774010_57774027	1.47427	Hoxa6	ENSMUST00000040104.5|Hand2|ENSMUSG00000038193.5|heart and neural crest derivatives expressed 2
mm39_v1_chr13_+_83652352_83652374	1.46973	Hoxa6	ENSMUST00000198916.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000200123.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000005722.14|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000163888.8|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chrM_+_5319_5333	1.46202	Hoxa6	ENSMUST00000082402.1|mt-Co1|ENSMUSG00000064351.1|mitochondrially encoded cytochrome c oxidase I
mm39_v1_chr17_+_85928459_85928469	1.41537	Hoxa6	ENSMUST00000162695.3|Six3|ENSMUSG00000038805.11|sine oculis-related homeobox 3
mm39_v1_chr9_-_40257586_40257634	1.39144	Hoxa6	ENSMUST00000121357.8|Gramd1b|ENSMUSG00000040111.18|GRAM domain containing 1B
mm39_v1_chr2_+_181408833_181408866	1.38188	Hoxa6	ENSMUST00000108756.8|Myt1|ENSMUSG00000010505.17|myelin transcription factor 1
mm39_v1_chr2_-_63928339_63928367	1.37827	Hoxa6	ENSMUST00000131615.9|Fign|ENSMUSG00000075324.14|fidgetin
mm39_v1_chr9_+_118307412_118307519	1.37278	Hoxa6	ENSMUST00000035020.15|Eomes|ENSMUSG00000032446.15|eomesodermin
mm39_v1_chr2_+_79538124_79538271	1.36376	Hoxa6	ENSMUST00000090760.9|Ppp1r1c|ENSMUSG00000034683.13|protein phosphatase 1, regulatory inhibitor subunit 1C	ENSMUST00000040863.11|Ppp1r1c|ENSMUSG00000034683.13|protein phosphatase 1, regulatory inhibitor subunit 1C	ENSMUST00000111780.3|Ppp1r1c|ENSMUSG00000034683.13|protein phosphatase 1, regulatory inhibitor subunit 1C
mm39_v1_chr13_+_83672389_83672411	1.35179	Hoxa6	ENSMUST00000200394.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr1_-_14374794_14374833	1.34609	Hoxa6	ENSMUST00000190337.7|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1
mm39_v1_chr11_-_99265721_99265735	1.34337	Hoxa6	ENSMUST00000006963.3|Krt28|ENSMUSG00000055937.2|keratin 28
mm39_v1_chr2_+_74522258_74522284	1.32994	Hoxa6	ENSMUST00000061745.5|Hoxd10|ENSMUSG00000050368.5|homeobox D10
mm39_v1_chr11_-_99213769_99213783	1.32162	Hoxa6	ENSMUST00000038004.3|Krt25|ENSMUSG00000035831.3|keratin 25
mm39_v1_chr1_-_13061333_13061401	1.30784	Hoxa6	ENSMUST00000115403.9|Slco5a1|ENSMUSG00000025938.17|solute carrier organic anion transporter family, member 5A1	ENSMUST00000136197.8|Slco5a1|ENSMUSG00000025938.17|solute carrier organic anion transporter family, member 5A1	ENSMUST00000115402.8|Slco5a1|ENSMUSG00000025938.17|solute carrier organic anion transporter family, member 5A1
mm39_v1_chr7_-_49286594_49286599	1.30191	Hoxa6	ENSMUST00000032717.7|Dbx1|ENSMUSG00000030507.7|developing brain homeobox 1
mm39_v1_chr10_+_87694924_87694935	1.29704	Hoxa6	ENSMUST00000095360.11|Igf1|ENSMUSG00000020053.19|insulin-like growth factor 1
mm39_v1_chr13_+_44994167_44994206	1.2637	Hoxa6	ENSMUST00000173906.3|Jarid2|ENSMUSG00000038518.16|jumonji, AT rich interactive domain 2
mm39_v1_chr2_+_132689640_132689661	1.26295	Hoxa6	ENSMUST00000124836.8|Crls1|ENSMUSG00000027357.17|cardiolipin synthase 1	ENSMUST00000154160.2|Crls1|ENSMUSG00000027357.17|cardiolipin synthase 1
mm39_v1_chr8_+_91681898_91682043	1.2602	Hoxa6	ENSMUST00000209746.2|Chd9|ENSMUSG00000056608.15|chromodomain helicase DNA binding protein 9
mm39_v1_chr10_+_99099084_99099106	1.26006	Hoxa6	ENSMUST00000020118.5|Dusp6|ENSMUSG00000019960.9|dual specificity phosphatase 6	ENSMUST00000220291.2|Dusp6|ENSMUSG00000019960.9|dual specificity phosphatase 6
mm39_v1_chr13_-_40887244_40887313	1.25551	Hoxa6	ENSMUST00000110193.9|Tfap2a|ENSMUSG00000021359.17|transcription factor AP-2, alpha
mm39_v1_chr1_-_14374842_14374908	1.24312	Hoxa6	ENSMUST00000188857.7|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1	ENSMUST00000185453.7|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1
mm39_v1_chr2_+_101455022_101455075	1.23881	Hoxa6	ENSMUST00000044031.4|Rag2|ENSMUSG00000032864.5|recombination activating gene 2
mm39_v1_chr11_-_99176086_99176090	1.23524	Hoxa6	ENSMUST00000017255.4|Krt24|ENSMUSG00000020913.4|keratin 24
mm39_v1_chr9_-_37580478_37580531	1.23148	Hoxa6	ENSMUST00000011262.4|Panx3|ENSMUSG00000011118.5|pannexin 3
mm39_v1_chr1_+_81054921_81054969	1.21874	Hoxa6	ENSMUST00000123720.8|Nyap2|ENSMUSG00000054976.15|neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2
mm39_v1_chr5_-_24732200_24732200	1.21669	Hoxa6	ENSMUST00000088311.6|Gbx1|ENSMUSG00000067724.6|gastrulation brain homeobox 1
mm39_v1_chr4_-_82939330_82939372	1.20169	Hoxa6	ENSMUST00000071708.12|Frem1|ENSMUSG00000059049.15|Fras1 related extracellular matrix protein 1
mm39_v1_chr17_-_72059865_72059889	1.1723	Hoxa6	ENSMUST00000057405.9|Pcare|ENSMUSG00000044375.9|photoreceptor cilium actin regulator
mm39_v1_chr18_+_82929037_82929069	1.16361	Hoxa6	ENSMUST00000236858.2|Zfp516|ENSMUSG00000058881.14|zinc finger protein 516
mm39_v1_chr5_+_88635834_88635841	1.15496	Hoxa6	ENSMUST00000199104.5|Enam|ENSMUSG00000029286.13|enamelin	ENSMUST00000031222.9|Enam|ENSMUSG00000029286.13|enamelin
mm39_v1_chr16_+_43184191_43184251	1.14119	Hoxa6	ENSMUST00000156367.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chr2_-_35994072_35994085	1.13943	Hoxa6	ENSMUST00000112961.10|Lhx6|ENSMUSG00000026890.20|LIM homeobox protein 6	ENSMUST00000112966.10|Lhx6|ENSMUSG00000026890.20|LIM homeobox protein 6
mm39_v1_chr11_-_99441687_99441693	1.13461	Hoxa6	ENSMUST00000092700.5|Krtap3-3|ENSMUSG00000069722.5|keratin associated protein 3-3
mm39_v1_chr4_-_82803384_82803389	1.11991	Hoxa6	ENSMUST00000048430.4|Cer1|ENSMUSG00000038192.6|cerberus 1, DAN family BMP antagonist
mm39_v1_chr19_+_26582450_26582519	1.11729	Hoxa6	ENSMUST00000176769.9|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000208163.2|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000025862.15|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000176030.8|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm39_v1_chr1_-_37955569_37955576	1.09821	Hoxa6	ENSMUST00000078307.7|Lyg2|ENSMUSG00000061584.7|lysozyme G-like 2
mm39_v1_chr15_+_39255185_39255196	1.09164	Hoxa6	ENSMUST00000228839.2|Rims2|ENSMUSG00000037386.17|regulating synaptic membrane exocytosis 2
mm39_v1_chr1_-_57010921_57011017	1.09161	Hoxa6	ENSMUST00000114415.10|Satb2|ENSMUSG00000038331.16|special AT-rich sequence binding protein 2
mm39_v1_chr2_-_72817060_72817060	1.0838	Hoxa6	ENSMUST00000112062.2|Gm11084|ENSMUSG00000079286.2|predicted gene 11084
mm39_v1_chr7_-_115423934_115423987	1.08355	Hoxa6	ENSMUST00000169129.8|Sox6|ENSMUSG00000051910.14|SRY (sex determining region Y)-box 6
mm39_v1_chr1_+_81054992_81055044	1.07925	Hoxa6	ENSMUST00000068275.12|Nyap2|ENSMUSG00000054976.15|neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2	ENSMUST00000113494.9|Nyap2|ENSMUSG00000054976.15|neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2
mm39_v1_chr6_-_136148820_136148887	1.07887	Hoxa6	ENSMUST00000188999.3|Grin2b|ENSMUSG00000030209.15|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm39_v1_chr2_-_35994819_35994903	1.07476	Hoxa6	ENSMUST00000148852.4|Lhx6|ENSMUSG00000026890.20|LIM homeobox protein 6
mm39_v1_chr5_+_89175894_89175954	1.07042	Hoxa6	ENSMUST00000113216.9|Slc4a4|ENSMUSG00000060961.17|solute carrier family 4 (anion exchanger), member 4	ENSMUST00000134303.2|Slc4a4|ENSMUSG00000060961.17|solute carrier family 4 (anion exchanger), member 4
mm39_v1_chr11_+_67090878_67090964	1.05606	Hoxa6	ENSMUST00000124516.8|Myh1|ENSMUSG00000056328.15|myosin, heavy polypeptide 1, skeletal muscle, adult	ENSMUST00000018637.15|Myh1|ENSMUSG00000056328.15|myosin, heavy polypeptide 1, skeletal muscle, adult	ENSMUST00000129018.8|Myh1|ENSMUSG00000056328.15|myosin, heavy polypeptide 1, skeletal muscle, adult
mm39_v1_chr15_-_65848649_65848655	1.05297	Hoxa6	ENSMUST00000239034.2|Hhla1|ENSMUSG00000072511.4|HERV-H LTR-associating 1	ENSMUST00000100584.3|Hhla1|ENSMUSG00000072511.4|HERV-H LTR-associating 1
mm39_v1_chr11_-_24025054_24025054	1.00513	Hoxa6	ENSMUST00000068360.2|A830031A19Rik|ENSMUSG00000055010.2|RIKEN cDNA A830031A19 gene
mm39_v1_chr14_+_54417419_54417419	1.00042	Hoxa6	ENSMUST00000103703.2|Traj39|ENSMUSG00000076891.2|T cell receptor alpha joining 39
mm39_v1_chr14_-_48904998_48905101	0.997093	Hoxa6	ENSMUST00000152018.8|Otx2|ENSMUSG00000021848.17|orthodenticle homeobox 2
mm39_v1_chr1_-_155627430_155627484	0.995924	Hoxa6	ENSMUST00000195275.2|Lhx4|ENSMUSG00000026468.15|LIM homeobox protein 4
mm39_v1_chr9_+_118307250_118307280	0.995452	Hoxa6	ENSMUST00000111763.8|Eomes|ENSMUSG00000032446.15|eomesodermin
mm39_v1_chr2_+_153742294_153742315	0.993248	Hoxa6	ENSMUST00000088955.12|Bpifb6|ENSMUSG00000068009.12|BPI fold containing family B, member 6	ENSMUST00000135501.3|Bpifb6|ENSMUSG00000068009.12|BPI fold containing family B, member 6
mm39_v1_chr17_+_34811217_34811303	0.992923	Hoxa6	ENSMUST00000038149.13|Pbx2|ENSMUSG00000034673.15|pre B cell leukemia homeobox 2
mm39_v1_chr2_+_181409075_181409117	0.980747	Hoxa6	ENSMUST00000108757.9|Myt1|ENSMUSG00000010505.17|myelin transcription factor 1
mm39_v1_chr17_+_85928244_85928270	0.978884	Hoxa6	ENSMUST00000176081.3|Six3|ENSMUSG00000038805.11|sine oculis-related homeobox 3
mm39_v1_chr3_+_101917455_101917487	0.966691	Hoxa6	ENSMUST00000066187.6|Nhlh2|ENSMUSG00000048540.9|nescient helix loop helix 2	ENSMUST00000198675.2|Nhlh2|ENSMUSG00000048540.9|nescient helix loop helix 2
mm39_v1_chr12_-_34578842_34578903	0.959592	Hoxa6	ENSMUST00000110819.4|Hdac9|ENSMUSG00000004698.12|histone deacetylase 9
mm39_v1_chr13_-_18556626_18556626	0.947994	Hoxa6	ENSMUST00000139064.10|Pou6f2|ENSMUSG00000009734.19|POU domain, class 6, transcription factor 2	ENSMUST00000175703.9|Pou6f2|ENSMUSG00000009734.19|POU domain, class 6, transcription factor 2
mm39_v1_chr2_+_83786742_83786742	0.945873	Hoxa6	ENSMUST00000178325.2|Gm13698|ENSMUSG00000094125.2|predicted gene 13698
mm39_v1_chr6_-_124817155_124817238	0.943856	Hoxa6	ENSMUST00000024206.6|Gnb3|ENSMUSG00000023439.12|guanine nucleotide binding protein (G protein), beta 3
mm39_v1_chr12_-_56660054_56660113	0.943734	Hoxa6	ENSMUST00000072631.6|Nkx2-9|ENSMUSG00000058669.8|NK2 homeobox 9
mm39_v1_chr3_+_125197722_125197780	0.939652	Hoxa6	ENSMUST00000173932.8|Ndst4|ENSMUSG00000027971.17|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
mm39_v1_chr16_+_43056218_43056243	0.923877	Hoxa6	ENSMUST00000146708.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chr10_+_127256736_127256786	0.92068	Hoxa6	ENSMUST00000064793.13|R3hdm2|ENSMUSG00000025404.16|R3H domain containing 2
mm39_v1_chr18_-_81029751_81029751	0.918562	Hoxa6	ENSMUST00000238808.2|Sall3|ENSMUSG00000024565.11|spalt like transcription factor 3
mm39_v1_chr11_+_100211363_100211534	0.905952	Hoxa6	ENSMUST00000152521.2|Eif1|ENSMUSG00000035530.14|eukaryotic translation initiation factor 1
mm39_v1_chr11_+_96256565_96256578	0.900543	Hoxa6	ENSMUST00000019117.3|Hoxb1|ENSMUSG00000018973.3|homeobox B1
mm39_v1_chr13_-_40441487_40441487	0.888402	Hoxa6	ENSMUST00000054635.8|Ofcc1|ENSMUSG00000047094.10|orofacial cleft 1 candidate 1
mm39_v1_chr2_+_120307390_120307457	0.874115	Hoxa6	ENSMUST00000110716.9|Capn3|ENSMUSG00000079110.13|calpain 3	ENSMUST00000028748.14|Capn3|ENSMUSG00000079110.13|calpain 3	ENSMUST00000090028.13|Capn3|ENSMUSG00000079110.13|calpain 3	ENSMUST00000110719.4|Capn3|ENSMUSG00000079110.13|calpain 3
mm39_v1_chr2_-_63014514_63014539	0.871679	Hoxa6	ENSMUST00000112452.2|Kcnh7|ENSMUSG00000059742.11|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm39_v1_chr1_-_150341911_150341921	0.86578	Hoxa6	ENSMUST00000162367.8|Prg4|ENSMUSG00000006014.17|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)	ENSMUST00000161611.8|Prg4|ENSMUSG00000006014.17|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)	ENSMUST00000161320.8|Prg4|ENSMUSG00000006014.17|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)	ENSMUST00000159035.2|Prg4|ENSMUSG00000006014.17|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)
mm39_v1_chr6_-_93890237_93890262	0.854947	Hoxa6	ENSMUST00000204167.2|Magi1|ENSMUSG00000045095.17|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm39_v1_chrM_+_7006_7021	0.851158	Hoxa6	ENSMUST00000082405.1|mt-Co2|ENSMUSG00000064354.1|mitochondrially encoded cytochrome c oxidase II
mm39_v1_chr13_+_83672654_83672682	0.848238	Hoxa6	ENSMUST00000199019.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr2_-_76720097_76720269	0.845493	Hoxa6	ENSMUST00000148747.8|Ttn|ENSMUSG00000051747.16|titin
mm39_v1_chr19_+_58500411_58500458	0.832977	Hoxa6	ENSMUST00000235305.2|Ccdc172|ENSMUSG00000025090.10|coiled-coil domain containing 172	ENSMUST00000069419.8|Ccdc172|ENSMUSG00000025090.10|coiled-coil domain containing 172
mm39_v1_chr7_-_37472290_37472316	0.830191	Hoxa6	ENSMUST00000176205.8|Zfp536|ENSMUSG00000043456.18|zinc finger protein 536
mm39_v1_chr11_-_99979052_99979096	0.81145	Hoxa6	ENSMUST00000107419.2|Krt32|ENSMUSG00000046095.6|keratin 32
mm39_v1_chr10_-_6930376_6930397	0.81116	Hoxa6	ENSMUST00000105617.8|Ipcef1|ENSMUSG00000064065.16|interaction protein for cytohesin exchange factors 1
mm39_v1_chr3_-_131138541_131138589	0.806283	Hoxa6	ENSMUST00000090246.5|Sgms2|ENSMUSG00000050931.8|sphingomyelin synthase 2	ENSMUST00000126569.2|Sgms2|ENSMUSG00000050931.8|sphingomyelin synthase 2
mm39_v1_chr14_+_54436247_54436247	0.80275	Hoxa6	ENSMUST00000103720.2|Traj21|ENSMUSG00000076908.2|T cell receptor alpha joining 21
mm39_v1_chr15_-_50753437_50753460	0.777401	Hoxa6	ENSMUST00000077935.6|Trps1|ENSMUSG00000038679.17|transcriptional repressor GATA binding 1
mm39_v1_chr3_+_101917392_101917439	0.774778	Hoxa6	ENSMUST00000196324.2|Nhlh2|ENSMUSG00000048540.9|nescient helix loop helix 2
mm39_v1_chr14_-_48904958_48904994	0.769336	Hoxa6	ENSMUST00000144465.8|Otx2|ENSMUSG00000021848.17|orthodenticle homeobox 2	ENSMUST00000133479.8|Otx2|ENSMUSG00000021848.17|orthodenticle homeobox 2	ENSMUST00000119070.8|Otx2|ENSMUSG00000021848.17|orthodenticle homeobox 2	ENSMUST00000226501.2|Otx2|ENSMUSG00000021848.17|orthodenticle homeobox 2
mm39_v1_chr17_-_45125468_45125525	0.761727	Hoxa6	ENSMUST00000159943.8|Runx2|ENSMUSG00000039153.18|runt related transcription factor 2	ENSMUST00000160673.8|Runx2|ENSMUSG00000039153.18|runt related transcription factor 2
mm39_v1_chr7_+_131144596_131144596	0.759173	Hoxa6	ENSMUST00000046093.6|Hmx3|ENSMUSG00000040148.6|H6 homeobox 3
mm39_v1_chr11_-_99412084_99412121	0.750165	Hoxa6	ENSMUST00000076948.2|Krt39|ENSMUSG00000064165.9|keratin 39
mm39_v1_chr19_+_55730488_55730501	0.745424	Hoxa6	ENSMUST00000111659.9|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box
mm39_v1_chr4_+_8690398_8690470	0.74517	Hoxa6	ENSMUST00000127476.8|Chd7|ENSMUSG00000041235.13|chromodomain helicase DNA binding protein 7
mm39_v1_chr11_+_31823096_31823275	0.741397	Hoxa6	ENSMUST00000155278.2|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4
mm39_v1_chr10_+_101517556_101517607	0.719417	Hoxa6	ENSMUST00000156751.8|Mgat4c|ENSMUSG00000019888.17|MGAT4 family, member C
mm39_v1_chr6_+_17491231_17491242	0.716413	Hoxa6	ENSMUST00000080469.12|Met|ENSMUSG00000009376.16|met proto-oncogene
mm39_v1_chr3_-_37180093_37180110	0.713186	Hoxa6	ENSMUST00000029275.6|Il2|ENSMUSG00000027720.8|interleukin 2
mm39_v1_chr9_-_48876290_48876290	0.711854	Hoxa6	ENSMUST00000008734.5|Htr3b|ENSMUSG00000008590.5|5-hydroxytryptamine (serotonin) receptor 3B
mm39_v1_chr3_+_41517829_41518042	0.708883	Hoxa6	ENSMUST00000170711.8|Jade1|ENSMUSG00000025764.15|jade family PHD finger 1
mm39_v1_chr11_+_67061908_67062046	0.705193	Hoxa6	ENSMUST00000018641.8|Myh2|ENSMUSG00000033196.18|myosin, heavy polypeptide 2, skeletal muscle, adult
mm39_v1_chr6_-_138403732_138403814	0.688869	Hoxa6	ENSMUST00000162932.2|Lmo3|ENSMUSG00000030226.13|LIM domain only 3
mm39_v1_chr2_-_44912927_44912996	0.687189	Hoxa6	ENSMUST00000202432.4|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2
mm39_v1_chr2_-_45007407_45007421	0.681191	Hoxa6	ENSMUST00000176438.9|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2
mm39_v1_chr8_+_23114035_23114059	0.680288	Hoxa6	ENSMUST00000033936.8|Dkk4|ENSMUSG00000031535.8|dickkopf WNT signaling pathway inhibitor 4
mm39_v1_chr10_+_85763545_85763545	0.675613	Hoxa6	ENSMUST00000170396.3|Ascl4|ENSMUSG00000085111.4|achaete-scute family bHLH transcription factor 4
mm39_v1_chr16_-_95260104_95260243	0.670459	Hoxa6	ENSMUST00000176345.10|Erg|ENSMUSG00000040732.21|ETS transcription factor	ENSMUST00000121809.11|Erg|ENSMUSG00000040732.21|ETS transcription factor	ENSMUST00000233664.2|Erg|ENSMUSG00000040732.21|ETS transcription factor	ENSMUST00000122199.10|Erg|ENSMUSG00000040732.21|ETS transcription factor
mm39_v1_chr9_-_42311007_42311023	0.668267	Hoxa6	ENSMUST00000160940.2|Tecta|ENSMUSG00000037705.14|tectorin alpha
mm39_v1_chr13_-_40883893_40883919	0.667222	Hoxa6	ENSMUST00000021787.7|Tfap2a|ENSMUSG00000021359.17|transcription factor AP-2, alpha
mm39_v1_chr2_-_168609110_168609126	0.664586	Hoxa6	ENSMUST00000029061.12|Sall4|ENSMUSG00000027547.18|spalt like transcription factor 4	ENSMUST00000103074.2|Sall4|ENSMUSG00000027547.18|spalt like transcription factor 4
mm39_v1_chr11_+_95915366_95915384	0.662153	Hoxa6	ENSMUST00000103157.10|Gip|ENSMUSG00000014351.13|gastric inhibitory polypeptide
mm39_v1_chr9_+_46910039_46910039	0.658207	Hoxa6	ENSMUST00000178065.3|Gm4791|ENSMUSG00000094893.3|predicted gene 4791
mm39_v1_chr11_+_67061837_67061866	0.652393	Hoxa6	ENSMUST00000170159.8|Myh2|ENSMUSG00000033196.18|myosin, heavy polypeptide 2, skeletal muscle, adult
mm39_v1_chr15_+_79575046_79575109	0.64732	Hoxa6	ENSMUST00000046463.10|Gtpbp1|ENSMUSG00000042535.10|GTP binding protein 1
mm39_v1_chr3_+_55689921_55689940	0.647087	Hoxa6	ENSMUST00000075422.6|Mab21l1|ENSMUSG00000056947.6|mab-21-like 1
mm39_v1_chr1_+_134217727_134217753	0.643691	Hoxa6	ENSMUST00000027730.6|Myog|ENSMUSG00000026459.6|myogenin
mm39_v1_chr1_-_126758520_126758536	0.640875	Hoxa6	ENSMUST00000162646.8|Nckap5|ENSMUSG00000049690.16|NCK-associated protein 5
mm39_v1_chr9_-_40287655_40287717	0.631227	Hoxa6	ENSMUST00000216821.2|Gramd1b|ENSMUSG00000040111.18|GRAM domain containing 1B
mm39_v1_chr1_-_165830187_165830247	0.624807	Hoxa6	ENSMUST00000184643.8|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000160908.8|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000027850.15|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000160260.9|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1
mm39_v1_chr15_+_102927366_102927405	0.61856	Hoxa6	ENSMUST00000165375.3|Hoxc4|ENSMUSG00000075394.5|homeobox C4
mm39_v1_chr10_-_40178182_40178196	0.617266	Hoxa6	ENSMUST00000099945.6|Amd1|ENSMUSG00000075232.7|S-adenosylmethionine decarboxylase 1	ENSMUST00000238953.2|Amd1|ENSMUSG00000075232.7|S-adenosylmethionine decarboxylase 1	ENSMUST00000238969.2|Amd1|ENSMUSG00000075232.7|S-adenosylmethionine decarboxylase 1
mm39_v1_chr6_+_15185562_15185595	0.61383	Hoxa6	ENSMUST00000137628.8|Foxp2|ENSMUSG00000029563.17|forkhead box P2
mm39_v1_chr2_-_45002902_45003021	0.608359	Hoxa6	ENSMUST00000076836.13|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000176732.8|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000200844.4|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2
mm39_v1_chr2_+_101455079_101455101	0.602058	Hoxa6	ENSMUST00000111227.2|Rag2|ENSMUSG00000032864.5|recombination activating gene 2
mm39_v1_chr6_-_97436223_97436264	0.597726	Hoxa6	ENSMUST00000113359.8|Frmd4b|ENSMUSG00000030064.17|FERM domain containing 4B
mm39_v1_chr8_+_48275178_48275178	0.596798	Hoxa6	ENSMUST00000079639.3|Cldn24|ENSMUSG00000061974.3|claudin 24
mm39_v1_chr11_-_99412162_99412166	0.593818	Hoxa6	ENSMUST00000107445.8|Krt39|ENSMUSG00000064165.9|keratin 39
mm39_v1_chr4_-_97666279_97666307	0.591038	Hoxa6	ENSMUST00000146447.8|E130114P18Rik|ENSMUSG00000048747.15|RIKEN cDNA E130114P18 gene
mm39_v1_chr1_+_177272215_177272235	0.587127	Hoxa6	ENSMUST00000192851.2|Zbtb18|ENSMUSG00000063659.12|zinc finger and BTB domain containing 18	ENSMUST00000193480.2|Zbtb18|ENSMUSG00000063659.12|zinc finger and BTB domain containing 18	ENSMUST00000195388.2|Zbtb18|ENSMUSG00000063659.12|zinc finger and BTB domain containing 18
mm39_v1_chr9_-_42311196_42311225	0.573204	Hoxa6	ENSMUST00000042190.14|Tecta|ENSMUSG00000037705.14|tectorin alpha
mm39_v1_chr6_+_53264255_53264327	0.572394	Hoxa6	ENSMUST00000203528.3|Creb5|ENSMUSG00000053007.10|cAMP responsive element binding protein 5
mm39_v1_chrX_-_42363663_42363663	0.56597	Hoxa6	ENSMUST00000016294.8|Tenm1|ENSMUSG00000016150.16|teneurin transmembrane protein 1
mm39_v1_chr19_+_8861274_8861294	0.565696	Hoxa6	ENSMUST00000177826.2|Gm49403|ENSMUSG00000116166.2|predicted gene, 49403
mm39_v1_chr11_+_23256883_23256908	0.533003	Hoxa6	ENSMUST00000180046.8|Usp34|ENSMUSG00000056342.17|ubiquitin specific peptidase 34
mm39_v1_chr18_+_82929451_82929458	0.533001	Hoxa6	ENSMUST00000235902.2|Zfp516|ENSMUSG00000058881.14|zinc finger protein 516
mm39_v1_chr6_-_144155167_144155195	0.531298	Hoxa6	ENSMUST00000077160.12|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5
mm39_v1_chr3_+_114874614_114874703	0.530581	Hoxa6	ENSMUST00000051309.9|Olfm3|ENSMUSG00000027965.16|olfactomedin 3
mm39_v1_chr14_-_50558325_50558325	0.530053	Hoxa6	ENSMUST00000050928.3|Olfr734|ENSMUSG00000045306.4|olfactory receptor 734
mm39_v1_chr19_+_55730316_55730351	0.525737	Hoxa6	ENSMUST00000111658.10|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box
mm39_v1_chr14_-_30213408_30213413	0.524264	Hoxa6	ENSMUST00000112250.6|Cacna1d|ENSMUSG00000015968.19|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm39_v1_chr6_-_138399896_138399997	0.518731	Hoxa6	ENSMUST00000161450.8|Lmo3|ENSMUSG00000030226.13|LIM domain only 3	ENSMUST00000163024.8|Lmo3|ENSMUSG00000030226.13|LIM domain only 3	ENSMUST00000162185.8|Lmo3|ENSMUSG00000030226.13|LIM domain only 3
mm39_v1_chr16_+_43184507_43184567	0.516803	Hoxa6	ENSMUST00000148775.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chr1_+_177273226_177273387	0.505508	Hoxa6	ENSMUST00000077225.8|Zbtb18|ENSMUSG00000063659.12|zinc finger and BTB domain containing 18
mm39_v1_chr13_+_27241551_27241567	0.5053	Hoxa6	ENSMUST00000110369.10|Prl|ENSMUSG00000021342.15|prolactin	ENSMUST00000224228.2|Prl|ENSMUSG00000021342.15|prolactin	ENSMUST00000018061.7|Prl|ENSMUSG00000021342.15|prolactin
mm39_v1_chrX_-_87159237_87159281	0.502815	Hoxa6	ENSMUST00000113966.8|Il1rapl1|ENSMUSG00000052372.11|interleukin 1 receptor accessory protein-like 1	ENSMUST00000113964.2|Il1rapl1|ENSMUSG00000052372.11|interleukin 1 receptor accessory protein-like 1
mm39_v1_chr19_+_22670134_22670191	0.501984	Hoxa6	ENSMUST00000237470.2|Trpm3|ENSMUSG00000052387.17|transient receptor potential cation channel, subfamily M, member 3	ENSMUST00000099564.10|Trpm3|ENSMUSG00000052387.17|transient receptor potential cation channel, subfamily M, member 3	ENSMUST00000099569.10|Trpm3|ENSMUSG00000052387.17|transient receptor potential cation channel, subfamily M, member 3	ENSMUST00000099566.5|Trpm3|ENSMUSG00000052387.17|transient receptor potential cation channel, subfamily M, member 3	ENSMUST00000235712.2|Trpm3|ENSMUSG00000052387.17|transient receptor potential cation channel, subfamily M, member 3
mm39_v1_chr18_-_14105670_14105844	0.496739	Hoxa6	ENSMUST00000025288.9|Zfp521|ENSMUSG00000024420.10|zinc finger protein 521
mm39_v1_chr18_-_66155651_66155671	0.49453	Hoxa6	ENSMUST00000143990.2|Lman1|ENSMUSG00000041891.17|lectin, mannose-binding, 1
mm39_v1_chr5_+_38233901_38233917	0.485418	Hoxa6	ENSMUST00000146864.6|Stx18|ENSMUSG00000029125.15|syntaxin 18
mm39_v1_chr19_+_55730696_55730774	0.468555	Hoxa6	ENSMUST00000153888.9|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box	ENSMUST00000127233.9|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box	ENSMUST00000061496.17|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box	ENSMUST00000111656.8|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box	ENSMUST00000111657.11|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box
mm39_v1_chr2_-_76700830_76700955	0.457936	Hoxa6	ENSMUST00000138542.2|Ttn|ENSMUSG00000051747.16|titin
mm39_v1_chr5_-_147244074_147244091	0.457931	Hoxa6	ENSMUST00000031650.4|Cdx2|ENSMUSG00000029646.4|caudal type homeobox 2
mm39_v1_chr19_+_55730242_55730274	0.449886	Hoxa6	ENSMUST00000111662.11|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box	ENSMUST00000041717.14|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box
mm39_v1_chr19_+_27299939_27299991	0.443491	Hoxa6	ENSMUST00000056708.4|Kcnv2|ENSMUSG00000047298.4|potassium channel, subfamily V, member 2
mm39_v1_chr2_-_45003270_45003296	0.435974	Hoxa6	ENSMUST00000202935.4|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000068415.11|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000127520.8|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2
mm39_v1_chr16_+_43323970_43324005	0.412636	Hoxa6	ENSMUST00000126100.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20	ENSMUST00000123047.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20	ENSMUST00000156981.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chr5_+_88523967_88523967	0.405081	Hoxa6	ENSMUST00000073363.2|Amtn|ENSMUSG00000029282.4|amelotin
mm39_v1_chr6_-_51443602_51443681	0.404899	Hoxa6	ENSMUST00000203253.2|Hnrnpa2b1|ENSMUSG00000004980.17|heterogeneous nuclear ribonucleoprotein A2/B1
mm39_v1_chr17_+_34258411_34258455	0.386193	Hoxa6	ENSMUST00000087497.11|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000131134.9|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000235819.2|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000114255.9|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000114252.9|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000237989.2|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2
mm39_v1_chr11_+_23256909_23256937	0.378331	Hoxa6	ENSMUST00000137823.8|Usp34|ENSMUSG00000056342.17|ubiquitin specific peptidase 34
mm39_v1_chr19_+_55883924_55883942	0.366706	Hoxa6	ENSMUST00000111646.8|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box
mm39_v1_chr19_-_59158488_59158488	0.360952	Hoxa6	ENSMUST00000172821.4|Vax1|ENSMUSG00000006270.8|ventral anterior homeobox 1
mm39_v1_chr4_-_120672900_120672959	0.359262	Hoxa6	ENSMUST00000120779.8|Nfyc|ENSMUSG00000032897.18|nuclear transcription factor-Y gamma
mm39_v1_chr13_-_40887444_40887467	0.358538	Hoxa6	ENSMUST00000224665.2|Tfap2a|ENSMUSG00000021359.17|transcription factor AP-2, alpha
mm39_v1_chr17_-_3746536_3746536	0.354997	Hoxa6	ENSMUST00000115800.2|Nox3|ENSMUSG00000023802.5|NADPH oxidase 3
mm39_v1_chr14_+_28740162_28740183	0.351555	Hoxa6	ENSMUST00000055662.4|Lrtm1|ENSMUSG00000045776.4|leucine-rich repeats and transmembrane domains 1
mm39_v1_chr15_-_50753061_50753118	0.350761	Hoxa6	ENSMUST00000165201.9|Trps1|ENSMUSG00000038679.17|transcriptional repressor GATA binding 1	ENSMUST00000184458.8|Trps1|ENSMUSG00000038679.17|transcriptional repressor GATA binding 1
mm39_v1_chr4_+_107825529_107825621	0.342205	Hoxa6	ENSMUST00000106713.5|Slc1a7|ENSMUSG00000008932.11|solute carrier family 1 (glutamate transporter), member 7	ENSMUST00000238795.2|Slc1a7|ENSMUSG00000008932.11|solute carrier family 1 (glutamate transporter), member 7
mm39_v1_chr8_+_88978600_88978639	0.339943	Hoxa6	ENSMUST00000154115.2|Tent4b|ENSMUSG00000036779.13|terminal nucleotidyltransferase 4B
mm39_v1_chr10_-_42459624_42459635	0.334204	Hoxa6	ENSMUST00000019938.11|Nr2e1|ENSMUSG00000019803.12|nuclear receptor subfamily 2, group E, member 1
mm39_v1_chr14_+_54413727_54413742	0.329961	Hoxa6	ENSMUST00000103701.2|Traj41|ENSMUSG00000076889.2|T cell receptor alpha joining 41
mm39_v1_chr13_+_16189041_16189060	0.324417	Hoxa6	ENSMUST00000164993.2|Inhba|ENSMUSG00000041324.15|inhibin beta-A
mm39_v1_chr3_+_60436163_60436452	0.315573	Hoxa6	ENSMUST00000194201.6|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1	ENSMUST00000193517.6|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1
mm39_v1_chr7_-_73191484_73191503	0.312894	Hoxa6	ENSMUST00000197642.2|Chd2|ENSMUSG00000078671.12|chromodomain helicase DNA binding protein 2	ENSMUST00000026895.14|Chd2|ENSMUSG00000078671.12|chromodomain helicase DNA binding protein 2	ENSMUST00000169922.9|Chd2|ENSMUSG00000078671.12|chromodomain helicase DNA binding protein 2
mm39_v1_chr2_-_168048795_168048842	0.309574	Hoxa6	ENSMUST00000057793.11|Adnp|ENSMUSG00000051149.16|activity-dependent neuroprotective protein
mm39_v1_chr5_+_89175815_89175826	0.299027	Hoxa6	ENSMUST00000130041.8|Slc4a4|ENSMUSG00000060961.17|solute carrier family 4 (anion exchanger), member 4
mm39_v1_chr7_-_108774367_108774414	0.291223	Hoxa6	ENSMUST00000207178.2|Lmo1|ENSMUSG00000036111.9|LIM domain only 1
mm39_v1_chr16_-_26810402_26810402	0.284921	Hoxa6	ENSMUST00000231299.2|Gmnc|ENSMUSG00000068428.8|geminin coiled-coil domain containing
mm39_v1_chr5_-_123127148_123127194	0.280317	Hoxa6	ENSMUST00000046073.16|Kdm2b|ENSMUSG00000029475.18|lysine (K)-specific demethylase 2B
mm39_v1_chr3_+_29568055_29568055	0.277573	Hoxa6	ENSMUST00000140288.2|Egfem1|ENSMUSG00000063600.15|EGF-like and EMI domain containing 1
mm39_v1_chr5_-_142803135_142803175	0.276939	Hoxa6	ENSMUST00000198181.2|Tnrc18|ENSMUSG00000039477.17|trinucleotide repeat containing 18
mm39_v1_chr19_-_46033353_46033724	0.264774	Hoxa6	ENSMUST00000026252.14|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1	ENSMUST00000156585.9|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1	ENSMUST00000185355.7|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1	ENSMUST00000152946.8|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1
mm39_v1_chr16_+_43067641_43067673	0.262807	Hoxa6	ENSMUST00000079441.13|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20	ENSMUST00000114691.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chr3_+_75982890_75982890	0.249643	Hoxa6	ENSMUST00000160261.8|Fstl5|ENSMUSG00000034098.15|follistatin-like 5
mm39_v1_chr2_-_18053158_18053260	0.239324	Hoxa6	ENSMUST00000066885.6|Skida1|ENSMUSG00000054074.10|SKI/DACH domain containing 1
mm39_v1_chr2_-_63014622_63014681	0.234602	Hoxa6	ENSMUST00000075052.10|Kcnh7|ENSMUSG00000059742.11|potassium voltage-gated channel, subfamily H (eag-related), member 7	ENSMUST00000112454.8|Kcnh7|ENSMUSG00000059742.11|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm39_v1_chr18_+_42669322_42669358	0.231078	Hoxa6	ENSMUST00000236418.2|Tcerg1|ENSMUSG00000024498.17|transcription elongation regulator 1 (CA150)
mm39_v1_chr6_-_144155197_144155294	0.229332	Hoxa6	ENSMUST00000038815.14|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5	ENSMUST00000111749.8|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5	ENSMUST00000170367.9|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5
mm39_v1_chr5_+_149601688_149601768	0.228067	Hoxa6	ENSMUST00000100404.6|B3glct|ENSMUSG00000051950.11|beta-3-glucosyltransferase
mm39_v1_chr2_-_136958544_136958564	0.225458	Hoxa6	ENSMUST00000028735.8|Jag1|ENSMUSG00000027276.8|jagged 1
mm39_v1_chr13_+_83672708_83672762	0.224069	Hoxa6	ENSMUST00000199105.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr18_+_69652880_69652895	0.220409	Hoxa6	ENSMUST00000200813.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4
mm39_v1_chr1_+_70764874_70765082	0.208853	Hoxa6	ENSMUST00000053922.12|Vwc2l|ENSMUSG00000045648.16|von Willebrand factor C domain-containing protein 2-like	ENSMUST00000161937.2|Vwc2l|ENSMUSG00000045648.16|von Willebrand factor C domain-containing protein 2-like	ENSMUST00000162182.2|Vwc2l|ENSMUSG00000045648.16|von Willebrand factor C domain-containing protein 2-like
mm39_v1_chr19_+_26725589_26725932	0.200377	Hoxa6	ENSMUST00000207812.2|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000175791.9|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000207118.2|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000209085.2|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000112637.10|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000207054.2|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000208589.2|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000176475.9|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000176698.9|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000207832.2|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000177252.9|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000208712.2|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000208186.2|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000208806.2|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000208027.2|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm39_v1_chr12_-_73093953_73093953	0.198888	Hoxa6	ENSMUST00000050029.8|Six1|ENSMUSG00000051367.9|sine oculis-related homeobox 1
mm39_v1_chr2_+_105505772_105505794	0.192116	Hoxa6	ENSMUST00000111085.8|Pax6|ENSMUSG00000027168.22|paired box 6
mm39_v1_chr18_-_23174698_23174729	0.191232	Hoxa6	ENSMUST00000097651.10|Nol4|ENSMUSG00000041923.16|nucleolar protein 4
mm39_v1_chrX_-_161747552_161747595	0.183125	Hoxa6	ENSMUST00000038769.3|S100g|ENSMUSG00000040808.5|S100 calcium binding protein G
mm39_v1_chr1_+_81055201_81055300	0.172623	Hoxa6	ENSMUST00000123285.2|Nyap2|ENSMUSG00000054976.15|neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2
mm39_v1_chr7_+_90739904_90739959	0.167135	Hoxa6	ENSMUST00000107196.10|Dlg2|ENSMUSG00000052572.20|discs large MAGUK scaffold protein 2	ENSMUST00000074273.10|Dlg2|ENSMUSG00000052572.20|discs large MAGUK scaffold protein 2
mm39_v1_chr10_+_101994841_101994940	0.165072	Hoxa6	ENSMUST00000020039.13|Mgat4c|ENSMUSG00000019888.17|MGAT4 family, member C
mm39_v1_chr17_+_3532455_3532483	0.161737	Hoxa6	ENSMUST00000227604.2|Tiam2|ENSMUSG00000023800.16|T cell lymphoma invasion and metastasis 2
mm39_v1_chr4_-_82623972_82623997	0.157522	Hoxa6	ENSMUST00000155821.2|Nfib|ENSMUSG00000008575.18|nuclear factor I/B
mm39_v1_chr9_+_61279640_61279665	0.156377	Hoxa6	ENSMUST00000178113.8|Tle3|ENSMUSG00000032280.17|transducin-like enhancer of split 3	ENSMUST00000159386.8|Tle3|ENSMUSG00000032280.17|transducin-like enhancer of split 3
mm39_v1_chr19_-_18978463_18978483	0.153711	Hoxa6	ENSMUST00000040153.15|Rorb|ENSMUSG00000036192.16|RAR-related orphan receptor beta	ENSMUST00000112828.8|Rorb|ENSMUSG00000036192.16|RAR-related orphan receptor beta
mm39_v1_chr2_+_26481435_26481447	0.144552	Hoxa6	ENSMUST00000152988.9|Egfl7|ENSMUSG00000026921.21|EGF-like domain 7	ENSMUST00000149789.2|Egfl7|ENSMUSG00000026921.21|EGF-like domain 7
mm39_v1_chr1_-_163141230_163141246	0.144166	Hoxa6	ENSMUST00000174397.3|Prrx1|ENSMUSG00000026586.17|paired related homeobox 1	ENSMUST00000075805.13|Prrx1|ENSMUSG00000026586.17|paired related homeobox 1
mm39_v1_chr6_+_104469751_104469926	0.142689	Hoxa6	ENSMUST00000161446.2|Cntn6|ENSMUSG00000030092.15|contactin 6	ENSMUST00000161070.8|Cntn6|ENSMUSG00000030092.15|contactin 6	ENSMUST00000089215.12|Cntn6|ENSMUSG00000030092.15|contactin 6
mm39_v1_chr10_+_42736345_42736373	0.140504	Hoxa6	ENSMUST00000063063.14|Scml4|ENSMUSG00000044770.15|Scm polycomb group protein like 4
mm39_v1_chrM_+_10167_10167	0.138961	Hoxa6	ENSMUST00000082414.1|mt-Nd4|ENSMUSG00000064363.1|mitochondrially encoded NADH dehydrogenase 4
mm39_v1_chr9_-_13245834_13245834	0.12922	Hoxa6	ENSMUST00000110582.4|Jrkl|ENSMUSG00000079083.4|Jrk-like
mm39_v1_chr17_-_59298338_59298370	0.123206	Hoxa6	ENSMUST00000025064.14|Pdzph1|ENSMUSG00000024227.15|PDZ and pleckstrin homology domains 1
mm39_v1_chr6_+_34575435_34575521	0.120299	Hoxa6	ENSMUST00000079391.10|Cald1|ENSMUSG00000029761.17|caldesmon 1	ENSMUST00000142512.8|Cald1|ENSMUSG00000029761.17|caldesmon 1	ENSMUST00000115027.8|Cald1|ENSMUSG00000029761.17|caldesmon 1	ENSMUST00000115026.8|Cald1|ENSMUSG00000029761.17|caldesmon 1
mm39_v1_chr12_+_76593799_76593864	0.107543	Hoxa6	ENSMUST00000218380.2|Plekhg3|ENSMUSG00000052609.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 3	ENSMUST00000219751.2|Plekhg3|ENSMUSG00000052609.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
mm39_v1_chr1_+_66361252_66361278	0.105133	Hoxa6	ENSMUST00000123647.8|Map2|ENSMUSG00000015222.19|microtubule-associated protein 2
mm39_v1_chr19_+_8861096_8861273	0.102062	Hoxa6	ENSMUST00000187504.7|Lbhd1|ENSMUSG00000096740.9|LBH domain containing 1
mm39_v1_chr16_-_95387444_95387454	0.100407	Hoxa6	ENSMUST00000233269.2|Erg|ENSMUSG00000040732.21|ETS transcription factor
mm39_v1_chr15_-_56557920_56557950	0.09861	Hoxa6	ENSMUST00000050544.8|Has2|ENSMUSG00000022367.8|hyaluronan synthase 2
mm39_v1_chr6_+_34686373_34686381	0.0882057	Hoxa6	ENSMUST00000115021.8|Cald1|ENSMUSG00000029761.17|caldesmon 1
mm39_v1_chr2_+_113235475_113235502	0.0874069	Hoxa6	ENSMUST00000238883.2|Fmn1|ENSMUSG00000044042.20|formin 1
mm39_v1_chr5_+_20433169_20433220	0.0654995	Hoxa6	ENSMUST00000197553.5|Magi2|ENSMUSG00000040003.19|membrane associated guanylate kinase, WW and PDZ domain containing 2	ENSMUST00000208219.2|Magi2|ENSMUSG00000040003.19|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm39_v1_chr15_+_92495007_92495051	0.065362	Hoxa6	ENSMUST00000035399.10|Pdzrn4|ENSMUSG00000036218.17|PDZ domain containing RING finger 4
mm39_v1_chr6_-_119940694_119940797	0.0521259	Hoxa6	ENSMUST00000161512.3|Wnk1|ENSMUSG00000045962.17|WNK lysine deficient protein kinase 1
mm39_v1_chr1_+_104696235_104696254	0.0517899	Hoxa6	ENSMUST00000062528.9|Cdh20|ENSMUSG00000050840.9|cadherin 20
mm39_v1_chr11_+_93935156_93935191	0.0427031	Hoxa6	ENSMUST00000024979.15|Spag9|ENSMUSG00000020859.17|sperm associated antigen 9
mm39_v1_chr14_+_10123804_10123919	0.0412713	Hoxa6	ENSMUST00000022262.6|Fezf2|ENSMUSG00000021743.7|Fez family zinc finger 2	ENSMUST00000224714.2|Fezf2|ENSMUSG00000021743.7|Fez family zinc finger 2
mm39_v1_chrX_-_167970196_167970206	0.0402547	Hoxa6	ENSMUST00000066112.12|Amelx|ENSMUSG00000031354.17|amelogenin, X-linked	ENSMUST00000112118.8|Amelx|ENSMUSG00000031354.17|amelogenin, X-linked	ENSMUST00000112120.8|Amelx|ENSMUSG00000031354.17|amelogenin, X-linked	ENSMUST00000112119.8|Amelx|ENSMUSG00000031354.17|amelogenin, X-linked
mm39_v1_chr8_+_121854566_121854679	0.0398424	Hoxa6	ENSMUST00000181609.2|Foxl1|ENSMUSG00000097084.2|forkhead box L1
mm39_v1_chr18_-_84104507_84104529	0.0299986	Hoxa6	ENSMUST00000060303.10|Tshz1|ENSMUSG00000046982.12|teashirt zinc finger family member 1
mm39_v1_chr11_+_93935066_93935100	0.0200686	Hoxa6	ENSMUST00000103168.10|Spag9|ENSMUSG00000020859.17|sperm associated antigen 9
mm39_v1_chr4_+_128582519_128582588	0.0169148	Hoxa6	ENSMUST00000106080.8|Phc2|ENSMUSG00000028796.18|polyhomeotic 2
mm39_v1_chr10_+_42459772_42459834	0.0039532	Hoxa6	ENSMUST00000105497.8|Ostm1|ENSMUSG00000038280.13|osteopetrosis associated transmembrane protein 1	ENSMUST00000144806.8|Ostm1|ENSMUSG00000038280.13|osteopetrosis associated transmembrane protein 1
mm39_v1_chr12_+_29578354_29578468	0.00040639	Hoxa6	ENSMUST00000218583.2|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like	ENSMUST00000049784.17|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like
