mm39_v1_chr2_-_110781268_110781268	6.7315	Hoxa9_Hoxb9	ENSMUST00000099623.10|Ano3|ENSMUSG00000074968.12|anoctamin 3
mm39_v1_chr19_-_45800730_45800746	5.28528	Hoxa9_Hoxb9	ENSMUST00000086993.11|Kcnip2|ENSMUSG00000025221.17|Kv channel-interacting protein 2
mm39_v1_chr11_-_79394904_79394915	4.97222	Hoxa9_Hoxb9	ENSMUST00000164465.3|Omg|ENSMUSG00000049612.11|oligodendrocyte myelin glycoprotein
mm39_v1_chr18_+_20443795_20443868	3.43817	Hoxa9_Hoxb9	ENSMUST00000077146.4|Dsg1a|ENSMUSG00000069441.4|desmoglein 1 alpha
mm39_v1_chr2_-_17395765_17395853	3.26325	Hoxa9_Hoxb9	ENSMUST00000177966.2|Nebl|ENSMUSG00000053702.17|nebulette
mm39_v1_chr3_+_138019040_138019054	3.23793	Hoxa9_Hoxb9	ENSMUST00000013455.13|Adh6a|ENSMUSG00000053054.14|alcohol dehydrogenase 6A (class V)	ENSMUST00000106247.2|Adh6a|ENSMUSG00000053054.14|alcohol dehydrogenase 6A (class V)
mm39_v1_chr11_-_42070517_42070783	2.98554	Hoxa9_Hoxb9	ENSMUST00000206105.2|Gabra1|ENSMUSG00000010803.14|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	ENSMUST00000153147.3|Gabra1|ENSMUSG00000010803.14|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
mm39_v1_chr19_-_50667079_50667134	2.97685	Hoxa9_Hoxb9	ENSMUST00000209413.2|Sorcs1|ENSMUSG00000043531.17|sortilin-related VPS10 domain containing receptor 1	ENSMUST00000072685.13|Sorcs1|ENSMUSG00000043531.17|sortilin-related VPS10 domain containing receptor 1	ENSMUST00000164039.9|Sorcs1|ENSMUSG00000043531.17|sortilin-related VPS10 domain containing receptor 1
mm39_v1_chr14_-_57371041_57371076	2.72961	Hoxa9_Hoxb9	ENSMUST00000039380.9|Gjb6|ENSMUSG00000040055.10|gap junction protein, beta 6
mm39_v1_chr2_-_121381832_121381861	2.589	Hoxa9_Hoxb9	ENSMUST00000212518.2|Frmd5|ENSMUSG00000027238.18|FERM domain containing 5
mm39_v1_chr18_-_31450095_31450186	2.56931	Hoxa9_Hoxb9	ENSMUST00000139924.2|Rit2|ENSMUSG00000057455.13|Ras-like without CAAX 2	ENSMUST00000153060.8|Rit2|ENSMUSG00000057455.13|Ras-like without CAAX 2
mm39_v1_chr2_+_22512195_22512217	2.55964	Hoxa9_Hoxb9	ENSMUST00000028123.4|Gad2|ENSMUSG00000026787.4|glutamic acid decarboxylase 2
mm39_v1_chr2_-_57942844_57942881	2.52771	Hoxa9_Hoxb9	ENSMUST00000090940.6|Ermn|ENSMUSG00000026830.10|ermin, ERM-like protein
mm39_v1_chr1_+_107439145_107439227	2.51437	Hoxa9_Hoxb9	ENSMUST00000009356.11|Serpinb2|ENSMUSG00000062345.11|serine (or cysteine) peptidase inhibitor, clade B, member 2	ENSMUST00000064916.9|Serpinb2|ENSMUSG00000062345.11|serine (or cysteine) peptidase inhibitor, clade B, member 2
mm39_v1_chr7_-_142215595_142215617	2.36105	Hoxa9_Hoxb9	ENSMUST00000145896.3|Igf2|ENSMUSG00000048583.17|insulin-like growth factor 2
mm39_v1_chr4_-_49549489_49549546	2.13901	Hoxa9_Hoxb9	ENSMUST00000029987.10|Aldob|ENSMUSG00000028307.10|aldolase B, fructose-bisphosphate
mm39_v1_chr7_+_43339842_43339842	2.13145	Hoxa9_Hoxb9	ENSMUST00000056329.7|Klk14|ENSMUSG00000044737.7|kallikrein related-peptidase 14
mm39_v1_chr2_+_124978518_124978553	2.08175	Hoxa9_Hoxb9	ENSMUST00000238754.2|Ctxn2|ENSMUSG00000074872.4|cortexin 2
mm39_v1_chr16_+_91022300_91022345	1.91239	Hoxa9_Hoxb9	ENSMUST00000035608.10|Olig2|ENSMUSG00000039830.10|oligodendrocyte transcription factor 2
mm39_v1_chr2_+_124978612_124978689	1.89271	Hoxa9_Hoxb9	ENSMUST00000099452.3|Ctxn2|ENSMUSG00000074872.4|cortexin 2	ENSMUST00000238377.2|Ctxn2|ENSMUSG00000074872.4|cortexin 2
mm39_v1_chr2_+_58645189_58645224	1.85276	Hoxa9_Hoxb9	ENSMUST00000102755.4|Upp2|ENSMUSG00000026839.18|uridine phosphorylase 2	ENSMUST00000230627.2|Upp2|ENSMUSG00000026839.18|uridine phosphorylase 2	ENSMUST00000229923.2|Upp2|ENSMUSG00000026839.18|uridine phosphorylase 2
mm39_v1_chr5_+_128677863_128677912	1.83348	Hoxa9_Hoxb9	ENSMUST00000117102.4|Fzd10|ENSMUSG00000081683.6|frizzled class receptor 10
mm39_v1_chr18_+_20509771_20509797	1.8103	Hoxa9_Hoxb9	ENSMUST00000076737.7|Dsg1b|ENSMUSG00000061928.7|desmoglein 1 beta
mm39_v1_chr1_+_66426127_66426159	1.80323	Hoxa9_Hoxb9	ENSMUST00000145419.8|Map2|ENSMUSG00000015222.19|microtubule-associated protein 2
mm39_v1_chr15_-_101482320_101482349	1.70965	Hoxa9_Hoxb9	ENSMUST00000042957.6|Krt75|ENSMUSG00000022986.6|keratin 75
mm39_v1_chr1_+_66403774_66403822	1.65647	Hoxa9_Hoxb9	ENSMUST00000077355.12|Map2|ENSMUSG00000015222.19|microtubule-associated protein 2	ENSMUST00000114012.8|Map2|ENSMUSG00000015222.19|microtubule-associated protein 2
mm39_v1_chr3_-_26386609_26386609	1.62432	Hoxa9_Hoxb9	ENSMUST00000193603.6|Nlgn1|ENSMUSG00000063887.14|neuroligin 1
mm39_v1_chr15_+_81820954_81821038	1.53093	Hoxa9_Hoxb9	ENSMUST00000038757.8|Csdc2|ENSMUSG00000042109.9|cold shock domain containing C2, RNA binding	ENSMUST00000230633.2|Csdc2|ENSMUSG00000042109.9|cold shock domain containing C2, RNA binding
mm39_v1_chr8_+_94537910_94537946	1.52066	Hoxa9_Hoxb9	ENSMUST00000138659.9|Gnao1|ENSMUSG00000031748.17|guanine nucleotide binding protein, alpha O
mm39_v1_chr11_-_99134885_99134964	1.50499	Hoxa9_Hoxb9	ENSMUST00000103132.10|Krt222|ENSMUSG00000035849.15|keratin 222	ENSMUST00000038214.7|Krt222|ENSMUSG00000035849.15|keratin 222
mm39_v1_chr17_-_91400142_91400245	1.46831	Hoxa9_Hoxb9	ENSMUST00000160800.9|Nrxn1|ENSMUSG00000024109.19|neurexin I
mm39_v1_chr18_+_20380397_20380397	1.40678	Hoxa9_Hoxb9	ENSMUST00000054128.7|Dsg1c|ENSMUSG00000034774.7|desmoglein 1 gamma
mm39_v1_chr6_-_24168082_24168096	1.3832	Hoxa9_Hoxb9	ENSMUST00000031713.9|Slc13a1|ENSMUSG00000029700.12|solute carrier family 13 (sodium/sulfate symporters), member 1
mm39_v1_chr18_-_31580436_31580460	1.37502	Hoxa9_Hoxb9	ENSMUST00000025110.5|Syt4|ENSMUSG00000024261.7|synaptotagmin IV
mm39_v1_chr6_+_108771840_108771885	1.36008	Hoxa9_Hoxb9	ENSMUST00000204483.2|Arl8b|ENSMUSG00000030105.9|ADP-ribosylation factor-like 8B
mm39_v1_chr18_+_12732951_12732983	1.35244	Hoxa9_Hoxb9	ENSMUST00000234255.2|Ttc39c|ENSMUSG00000024424.16|tetratricopeptide repeat domain 39C	ENSMUST00000169401.8|Ttc39c|ENSMUSG00000024424.16|tetratricopeptide repeat domain 39C
mm39_v1_chrX_-_144131890_144132085	1.33014	Hoxa9_Hoxb9	ENSMUST00000040084.10|Lhfpl1|ENSMUSG00000041700.10|lipoma HMGIC fusion partner-like 1	ENSMUST00000123443.2|Lhfpl1|ENSMUSG00000041700.10|lipoma HMGIC fusion partner-like 1
mm39_v1_chr7_-_28330322_28330492	1.32886	Hoxa9_Hoxb9	ENSMUST00000040112.5|Acp7|ENSMUSG00000037469.12|acid phosphatase 7, tartrate resistant	ENSMUST00000239470.2|Acp7|ENSMUSG00000037469.12|acid phosphatase 7, tartrate resistant
mm39_v1_chr10_-_116732813_116732861	1.2835	Hoxa9_Hoxb9	ENSMUST00000048229.9|Myrfl|ENSMUSG00000034057.9|myelin regulatory factor-like
mm39_v1_chr19_-_57185861_57185893	1.28315	Hoxa9_Hoxb9	ENSMUST00000111550.8|Ablim1|ENSMUSG00000025085.17|actin-binding LIM protein 1
mm39_v1_chr7_-_28329924_28329993	1.27667	Hoxa9_Hoxb9	ENSMUST00000159095.2|Acp7|ENSMUSG00000037469.12|acid phosphatase 7, tartrate resistant	ENSMUST00000159418.8|Acp7|ENSMUSG00000037469.12|acid phosphatase 7, tartrate resistant	ENSMUST00000159560.3|Acp7|ENSMUSG00000037469.12|acid phosphatase 7, tartrate resistant
mm39_v1_chr2_-_32977182_32977265	1.26037	Hoxa9_Hoxb9	ENSMUST00000102810.10|Garnl3|ENSMUSG00000038860.16|GTPase activating RANGAP domain-like 3
mm39_v1_chr2_-_32976378_32976452	1.23101	Hoxa9_Hoxb9	ENSMUST00000049618.9|Garnl3|ENSMUSG00000038860.16|GTPase activating RANGAP domain-like 3
mm39_v1_chr8_+_113296675_113296692	1.21785	Hoxa9_Hoxb9	ENSMUST00000034225.7|Cntnap4|ENSMUSG00000031772.18|contactin associated protein-like 4	ENSMUST00000118171.8|Cntnap4|ENSMUSG00000031772.18|contactin associated protein-like 4
mm39_v1_chr2_+_58644922_58644954	1.17731	Hoxa9_Hoxb9	ENSMUST00000059102.13|Upp2|ENSMUSG00000026839.18|uridine phosphorylase 2
mm39_v1_chr2_-_86180622_86180628	1.16935	Hoxa9_Hoxb9	ENSMUST00000099894.5|Olfr1055|ENSMUSG00000075189.6|olfactory receptor 1055	ENSMUST00000213564.3|Olfr1055|ENSMUSG00000075189.6|olfactory receptor 1055
mm39_v1_chrX_+_136552469_136552469	1.12721	Hoxa9_Hoxb9	ENSMUST00000075471.4|Il1rapl2|ENSMUSG00000059203.11|interleukin 1 receptor accessory protein-like 2
mm39_v1_chr7_+_28393419_28393444	1.1199	Hoxa9_Hoxb9	ENSMUST00000108280.2|Fbxo27|ENSMUSG00000037463.15|F-box protein 27
mm39_v1_chr19_-_7319211_7319228	1.11638	Hoxa9_Hoxb9	ENSMUST00000171393.8|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2
mm39_v1_chr14_+_20724378_20724497	1.11281	Hoxa9_Hoxb9	ENSMUST00000224492.2|Sec24c|ENSMUSG00000039367.12|Sec24 related gene family, member C (S. cerevisiae)	ENSMUST00000223751.2|Sec24c|ENSMUSG00000039367.12|Sec24 related gene family, member C (S. cerevisiae)	ENSMUST00000225108.2|Sec24c|ENSMUSG00000039367.12|Sec24 related gene family, member C (S. cerevisiae)	ENSMUST00000224754.2|Sec24c|ENSMUSG00000039367.12|Sec24 related gene family, member C (S. cerevisiae)
mm39_v1_chr5_+_145141333_145141478	1.06766	Hoxa9_Hoxb9	ENSMUST00000085671.10|Zkscan5|ENSMUSG00000055991.16|zinc finger with KRAB and SCAN domains 5	ENSMUST00000031601.8|Zkscan5|ENSMUSG00000055991.16|zinc finger with KRAB and SCAN domains 5
mm39_v1_chr6_-_139478919_139478974	1.06126	Hoxa9_Hoxb9	ENSMUST00000170650.3|Rergl|ENSMUSG00000092164.3|RERG/RAS-like
mm39_v1_chrX_-_74621828_74621854	1.05545	Hoxa9_Hoxb9	ENSMUST00000033545.6|Rab39b|ENSMUSG00000031202.6|RAB39B, member RAS oncogene family
mm39_v1_chr14_+_20724366_20724376	1.04271	Hoxa9_Hoxb9	ENSMUST00000048657.10|Sec24c|ENSMUSG00000039367.12|Sec24 related gene family, member C (S. cerevisiae)
mm39_v1_chr3_+_108498595_108498727	1.03519	Hoxa9_Hoxb9	ENSMUST00000051145.15|Wdr47|ENSMUSG00000040389.16|WD repeat domain 47
mm39_v1_chr6_-_87958611_87958626	1.02887	Hoxa9_Hoxb9	ENSMUST00000056403.7|H1f10|ENSMUSG00000044927.7|H1.10 linker histone
mm39_v1_chr7_-_101519973_101519995	1.01841	Hoxa9_Hoxb9	ENSMUST00000126204.8|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)	ENSMUST00000155311.2|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)	ENSMUST00000106983.8|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)	ENSMUST00000123630.8|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)
mm39_v1_chr6_+_104469751_104469926	1.00453	Hoxa9_Hoxb9	ENSMUST00000161446.2|Cntn6|ENSMUSG00000030092.15|contactin 6	ENSMUST00000161070.8|Cntn6|ENSMUSG00000030092.15|contactin 6	ENSMUST00000089215.12|Cntn6|ENSMUSG00000030092.15|contactin 6
mm39_v1_chr3_+_82933383_82933522	0.999359	Hoxa9_Hoxb9	ENSMUST00000029630.15|Fga|ENSMUSG00000028001.17|fibrinogen alpha chain	ENSMUST00000166581.4|Fga|ENSMUSG00000028001.17|fibrinogen alpha chain
mm39_v1_chr3_+_93052089_93052106	0.993674	Hoxa9_Hoxb9	ENSMUST00000107300.7|Crnn|ENSMUSG00000078657.7|cornulin	ENSMUST00000195515.2|Crnn|ENSMUSG00000078657.7|cornulin
mm39_v1_chr7_-_101513300_101513363	0.990016	Hoxa9_Hoxb9	ENSMUST00000106981.8|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)
mm39_v1_chr18_+_38809771_38809771	0.940176	Hoxa9_Hoxb9	ENSMUST00000134388.2|9630014M24Rik|ENSMUSG00000118257.2|RIKEN cDNA 9630014M24 gene	ENSMUST00000148850.8|Arhgap26|ENSMUSG00000118193.2|Rho GTPase activating protein 26
mm39_v1_chr11_-_78277384_78277433	0.910273	Hoxa9_Hoxb9	ENSMUST00000108294.2|Foxn1|ENSMUSG00000002057.5|forkhead box N1
mm39_v1_chr5_-_77243123_77243124	0.897692	Hoxa9_Hoxb9	ENSMUST00000113453.9|Hopx|ENSMUSG00000059325.15|HOP homeobox
mm39_v1_chr2_+_15531281_15531293	0.895278	Hoxa9_Hoxb9	ENSMUST00000146205.3|Malrd1|ENSMUSG00000075520.6|MAM and LDL receptor class A domain containing 1
mm39_v1_chr13_-_59890564_59890564	0.880906	Hoxa9_Hoxb9	ENSMUST00000055343.3|1700014D04Rik|ENSMUSG00000051054.5|RIKEN cDNA 1700014D04 gene
mm39_v1_chr9_+_43222104_43222145	0.871367	Hoxa9_Hoxb9	ENSMUST00000034511.7|Trim29|ENSMUSG00000032013.7|tripartite motif-containing 29
mm39_v1_chr5_-_77243072_77243122	0.859632	Hoxa9_Hoxb9	ENSMUST00000120827.9|Hopx|ENSMUSG00000059325.15|HOP homeobox
mm39_v1_chr14_-_31503869_31503892	0.84299	Hoxa9_Hoxb9	ENSMUST00000227089.2|Ankrd28|ENSMUSG00000014496.9|ankyrin repeat domain 28
mm39_v1_chr3_+_84859453_84859493	0.831579	Hoxa9_Hoxb9	ENSMUST00000029727.8|Fbxw7|ENSMUSG00000028086.16|F-box and WD-40 domain protein 7
mm39_v1_chr7_-_101519872_101519890	0.824302	Hoxa9_Hoxb9	ENSMUST00000106986.9|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)
mm39_v1_chrX_-_100128958_100128978	0.802974	Hoxa9_Hoxb9	ENSMUST00000101362.8|Slc7a3|ENSMUSG00000031297.15|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3	ENSMUST00000073927.5|Slc7a3|ENSMUSG00000031297.15|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3
mm39_v1_chr8_+_67933573_67933573	0.783199	Hoxa9_Hoxb9	ENSMUST00000212171.2|Nat1|ENSMUSG00000025588.5|N-acetyl transferase 1
mm39_v1_chr15_+_6552270_6552346	0.782102	Hoxa9_Hoxb9	ENSMUST00000226412.2|Fyb|ENSMUSG00000022148.17|FYN binding protein
mm39_v1_chr10_-_80426125_80426175	0.773725	Hoxa9_Hoxb9	ENSMUST00000187646.2|Abhd17a|ENSMUSG00000003346.15|abhydrolase domain containing 17A	ENSMUST00000191440.7|Abhd17a|ENSMUSG00000003346.15|abhydrolase domain containing 17A	ENSMUST00000003436.12|Abhd17a|ENSMUSG00000003346.15|abhydrolase domain containing 17A
mm39_v1_chr18_-_44292952_44293020	0.769388	Hoxa9_Hoxb9	ENSMUST00000181652.9|Gm10267|ENSMUSG00000069385.11|predicted gene 10267
mm39_v1_chr19_-_7319157_7319195	0.760025	Hoxa9_Hoxb9	ENSMUST00000164205.8|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2	ENSMUST00000165286.8|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2	ENSMUST00000168324.2|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2	ENSMUST00000032557.15|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2
mm39_v1_chr9_+_64142483_64142483	0.744901	Hoxa9_Hoxb9	ENSMUST00000039011.4|Uchl4|ENSMUSG00000035337.4|ubiquitin carboxyl-terminal esterase L4
mm39_v1_chr6_-_122317484_122317520	0.744681	Hoxa9_Hoxb9	ENSMUST00000112600.9|Phc1|ENSMUSG00000040669.15|polyhomeotic 1
mm39_v1_chr4_+_44012638_44012694	0.719307	Hoxa9_Hoxb9	ENSMUST00000107847.10|Clta|ENSMUSG00000028478.19|clathrin, light polypeptide (Lca)	ENSMUST00000170241.8|Clta|ENSMUSG00000028478.19|clathrin, light polypeptide (Lca)	ENSMUST00000107849.10|Clta|ENSMUSG00000028478.19|clathrin, light polypeptide (Lca)	ENSMUST00000107851.10|Clta|ENSMUSG00000028478.19|clathrin, light polypeptide (Lca)	ENSMUST00000107845.4|Clta|ENSMUSG00000028478.19|clathrin, light polypeptide (Lca)
mm39_v1_chr19_-_57185928_57185969	0.710543	Hoxa9_Hoxb9	ENSMUST00000111544.8|Ablim1|ENSMUSG00000025085.17|actin-binding LIM protein 1
mm39_v1_chr7_-_101519914_101519935	0.702631	Hoxa9_Hoxb9	ENSMUST00000106985.8|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)	ENSMUST00000151706.8|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)
mm39_v1_chr14_-_70561231_70561263	0.674925	Hoxa9_Hoxb9	ENSMUST00000151011.8|Slc39a14|ENSMUSG00000022094.16|solute carrier family 39 (zinc transporter), member 14
mm39_v1_chr7_-_101519791_101519841	0.670121	Hoxa9_Hoxb9	ENSMUST00000124026.8|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)
mm39_v1_chr14_+_56255422_56255428	0.666936	Hoxa9_Hoxb9	ENSMUST00000022836.6|Mcpt1|ENSMUSG00000022227.6|mast cell protease 1
mm39_v1_chr3_+_66893280_66893326	0.651234	Hoxa9_Hoxb9	ENSMUST00000161726.2|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1	ENSMUST00000160504.2|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1
mm39_v1_chr15_+_81821112_81821183	0.634801	Hoxa9_Hoxb9	ENSMUST00000135663.2|Csdc2|ENSMUSG00000042109.9|cold shock domain containing C2, RNA binding
mm39_v1_chr7_-_135130374_135130389	0.629016	Hoxa9_Hoxb9	ENSMUST00000053716.8|Clrn3|ENSMUSG00000050866.8|clarin 3
mm39_v1_chr7_-_85985625_85985625	0.622994	Hoxa9_Hoxb9	ENSMUST00000069279.5|Olfr307|ENSMUSG00000055610.6|olfactory receptor 307
mm39_v1_chr6_+_134958681_134958681	0.622172	Hoxa9_Hoxb9	ENSMUST00000167323.3|Apold1|ENSMUSG00000090698.3|apolipoprotein L domain containing 1
mm39_v1_chr19_-_57185988_57186063	0.612975	Hoxa9_Hoxb9	ENSMUST00000099294.9|Ablim1|ENSMUSG00000025085.17|actin-binding LIM protein 1
mm39_v1_chr2_-_23938869_23938881	0.610444	Hoxa9_Hoxb9	ENSMUST00000114497.2|Hnmt|ENSMUSG00000026986.15|histamine N-methyltransferase
mm39_v1_chr8_-_5155347_5155358	0.603738	Hoxa9_Hoxb9	ENSMUST00000023835.3|Slc10a2|ENSMUSG00000023073.3|solute carrier family 10, member 2
mm39_v1_chr3_-_96812610_96812662	0.582462	Hoxa9_Hoxb9	ENSMUST00000029738.14|Gpr89|ENSMUSG00000028096.14|G protein-coupled receptor 89
mm39_v1_chr13_-_21826688_21826688	0.579599	Hoxa9_Hoxb9	ENSMUST00000205631.3|Olfr11|ENSMUSG00000036658.5|olfactory receptor 11
mm39_v1_chr8_+_27532623_27532669	0.5744	Hoxa9_Hoxb9	ENSMUST00000209856.2|Plpbp|ENSMUSG00000031485.16|pyridoxal phosphate binding protein	ENSMUST00000098851.12|Plpbp|ENSMUSG00000031485.16|pyridoxal phosphate binding protein	ENSMUST00000211393.2|Plpbp|ENSMUSG00000031485.16|pyridoxal phosphate binding protein	ENSMUST00000211518.2|Plpbp|ENSMUSG00000031485.16|pyridoxal phosphate binding protein
mm39_v1_chr4_-_49597837_49597876	0.570264	Hoxa9_Hoxb9	ENSMUST00000042750.3|Pgap4|ENSMUSG00000039611.3|post-GPI attachment to proteins GalNAc transferase 4
mm39_v1_chr18_+_37898633_37898633	0.564997	Hoxa9_Hoxb9	ENSMUST00000044851.8|Pcdhga12|ENSMUSG00000102428.2|protocadherin gamma subfamily A, 12
mm39_v1_chr1_+_177557380_177557405	0.546228	Hoxa9_Hoxb9	ENSMUST00000016106.6|1700016C15Rik|ENSMUSG00000015962.6|RIKEN cDNA 1700016C15 gene
mm39_v1_chr1_+_13738967_13739019	0.535541	Hoxa9_Hoxb9	ENSMUST00000088542.4|Xkr9|ENSMUSG00000067813.4|X-linked Kx blood group related 9
mm39_v1_chr7_+_55699883_55700001	0.534399	Hoxa9_Hoxb9	ENSMUST00000205653.2|Herc2|ENSMUSG00000030451.17|HECT and RLD domain containing E3 ubiquitin protein ligase 2	ENSMUST00000076226.13|Herc2|ENSMUSG00000030451.17|HECT and RLD domain containing E3 ubiquitin protein ligase 2
mm39_v1_chr13_-_48746836_48746881	0.531318	Hoxa9_Hoxb9	ENSMUST00000238995.2|Ptpdc1|ENSMUSG00000038042.12|protein tyrosine phosphatase domain containing 1
mm39_v1_chr7_+_27977141_27977194	0.518266	Hoxa9_Hoxb9	ENSMUST00000094651.4|Eid2b|ENSMUSG00000070705.4|EP300 interacting inhibitor of differentiation 2B
mm39_v1_chr8_-_55340024_55340185	0.512854	Hoxa9_Hoxb9	ENSMUST00000176866.8|Wdr17|ENSMUSG00000039375.17|WD repeat domain 17
mm39_v1_chr5_-_73349191_73349276	0.493416	Hoxa9_Hoxb9	ENSMUST00000176910.3|Fryl|ENSMUSG00000070733.14|FRY like transcription coactivator
mm39_v1_chr11_+_66969119_66969133	0.49227	Hoxa9_Hoxb9	ENSMUST00000108689.8|Myh3|ENSMUSG00000020908.15|myosin, heavy polypeptide 3, skeletal muscle, embryonic	ENSMUST00000007301.14|Myh3|ENSMUSG00000020908.15|myosin, heavy polypeptide 3, skeletal muscle, embryonic	ENSMUST00000165221.2|Myh3|ENSMUSG00000020908.15|myosin, heavy polypeptide 3, skeletal muscle, embryonic
mm39_v1_chr11_-_109188947_109188968	0.478087	Hoxa9_Hoxb9	ENSMUST00000020920.10|Rgs9|ENSMUSG00000020599.14|regulator of G-protein signaling 9
mm39_v1_chr6_+_146944253_146944298	0.471214	Hoxa9_Hoxb9	ENSMUST00000036111.10|Mrps35|ENSMUSG00000040112.10|mitochondrial ribosomal protein S35
mm39_v1_chr2_-_80277969_80277969	0.470413	Hoxa9_Hoxb9	ENSMUST00000028389.4|Frzb|ENSMUSG00000027004.4|frizzled-related protein
mm39_v1_chr5_+_137786031_137786069	0.465062	Hoxa9_Hoxb9	ENSMUST00000035852.14|Zcwpw1|ENSMUSG00000037108.14|zinc finger, CW type with PWWP domain 1
mm39_v1_chr3_-_95014218_95014241	0.462581	Hoxa9_Hoxb9	ENSMUST00000107233.9|Pip5k1a|ENSMUSG00000028126.17|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
mm39_v1_chr4_-_88562696_88562696	0.456077	Hoxa9_Hoxb9	ENSMUST00000105149.3|Ifna13|ENSMUSG00000063376.7|interferon alpha 13
mm39_v1_chr16_-_17348882_17348936	0.45186	Hoxa9_Hoxb9	ENSMUST00000231548.2|Thap7|ENSMUSG00000022760.18|THAP domain containing 7	ENSMUST00000232041.2|Thap7|ENSMUSG00000022760.18|THAP domain containing 7	ENSMUST00000231288.2|Thap7|ENSMUSG00000022760.18|THAP domain containing 7
mm39_v1_chr6_+_51500881_51500915	0.450632	Hoxa9_Hoxb9	ENSMUST00000049152.15|Snx10|ENSMUSG00000038301.16|sorting nexin 10
mm39_v1_chr6_+_132928065_132928065	0.443439	Hoxa9_Hoxb9	ENSMUST00000070991.5|Tas2r129|ENSMUSG00000063762.6|taste receptor, type 2, member 129
mm39_v1_chr16_+_26281885_26282006	0.429327	Hoxa9_Hoxb9	ENSMUST00000161053.8|Cldn16|ENSMUSG00000038148.14|claudin 16	ENSMUST00000115302.2|Cldn16|ENSMUSG00000038148.14|claudin 16
mm39_v1_chr14_+_54413727_54413742	0.42412	Hoxa9_Hoxb9	ENSMUST00000103701.2|Traj41|ENSMUSG00000076889.2|T cell receptor alpha joining 41
mm39_v1_chr4_-_119217079_119217095	0.420117	Hoxa9_Hoxb9	ENSMUST00000143494.3|Ccdc30|ENSMUSG00000028637.17|coiled-coil domain containing 30	ENSMUST00000154606.9|Ccdc30|ENSMUSG00000028637.17|coiled-coil domain containing 30
mm39_v1_chr14_+_56279498_56279498	0.411219	Hoxa9_Hoxb9	ENSMUST00000015576.6|Mcpt2|ENSMUSG00000022226.7|mast cell protease 2
mm39_v1_chr3_+_98187743_98187760	0.405168	Hoxa9_Hoxb9	ENSMUST00000120541.8|Hmgcs2|ENSMUSG00000027875.13|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	ENSMUST00000090746.3|Hmgcs2|ENSMUSG00000027875.13|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2
mm39_v1_chr9_-_60594742_60594955	0.38921	Hoxa9_Hoxb9	ENSMUST00000114032.8|Lrrc49|ENSMUSG00000047766.16|leucine rich repeat containing 49	ENSMUST00000166168.8|Lrrc49|ENSMUSG00000047766.16|leucine rich repeat containing 49	ENSMUST00000132366.2|Lrrc49|ENSMUSG00000047766.16|leucine rich repeat containing 49
mm39_v1_chr5_-_32903687_32903755	0.388213	Hoxa9_Hoxb9	ENSMUST00000135248.2|Pisd|ENSMUSG00000023452.20|phosphatidylserine decarboxylase
mm39_v1_chr7_-_106423873_106423873	0.379186	Hoxa9_Hoxb9	ENSMUST00000208895.3|Olfr702|ENSMUSG00000056863.6|olfactory receptor 702
mm39_v1_chr10_+_3822667_3822789	0.375907	Hoxa9_Hoxb9	ENSMUST00000136671.8|Plekhg1|ENSMUSG00000040624.19|pleckstrin homology domain containing, family G (with RhoGef domain) member 1	ENSMUST00000042438.13|Plekhg1|ENSMUSG00000040624.19|pleckstrin homology domain containing, family G (with RhoGef domain) member 1
mm39_v1_chr10_-_130265572_130265572	0.366158	Hoxa9_Hoxb9	ENSMUST00000171811.4|Vmn2r85|ENSMUSG00000092048.4|vomeronasal 2, receptor 85
mm39_v1_chr9_+_38119661_38119661	0.365814	Hoxa9_Hoxb9	ENSMUST00000211975.3|Olfr893|ENSMUSG00000093901.4|olfactory receptor 893
mm39_v1_chr8_+_27532583_27532616	0.359837	Hoxa9_Hoxb9	ENSMUST00000033875.10|Plpbp|ENSMUSG00000031485.16|pyridoxal phosphate binding protein	ENSMUST00000209525.2|Plpbp|ENSMUSG00000031485.16|pyridoxal phosphate binding protein
mm39_v1_chr12_-_81615248_81615248	0.356441	Hoxa9_Hoxb9	ENSMUST00000008582.4|Adam21|ENSMUSG00000008438.4|a disintegrin and metallopeptidase domain 21
mm39_v1_chr13_-_21765822_21765929	0.351322	Hoxa9_Hoxb9	ENSMUST00000206526.3|Olfr1364|ENSMUSG00000046016.4|olfactory receptor 1364	ENSMUST00000213912.2|Olfr1364|ENSMUSG00000046016.4|olfactory receptor 1364
mm39_v1_chr11_-_109188892_109188906	0.343439	Hoxa9_Hoxb9	ENSMUST00000106706.8|Rgs9|ENSMUSG00000020599.14|regulator of G-protein signaling 9
mm39_v1_chrX_+_71025128_71025128	0.341471	Hoxa9_Hoxb9	ENSMUST00000114569.2|Fate1|ENSMUSG00000053593.11|fetal and adult testis expressed 1
mm39_v1_chr2_-_165129675_165129765	0.338768	Hoxa9_Hoxb9	ENSMUST00000109299.8|Slc35c2|ENSMUSG00000017664.17|solute carrier family 35, member C2	ENSMUST00000109298.8|Slc35c2|ENSMUSG00000017664.17|solute carrier family 35, member C2	ENSMUST00000130393.2|Slc35c2|ENSMUSG00000017664.17|solute carrier family 35, member C2	ENSMUST00000017808.14|Slc35c2|ENSMUSG00000017664.17|solute carrier family 35, member C2	ENSMUST00000131409.2|Slc35c2|ENSMUSG00000017664.17|solute carrier family 35, member C2	ENSMUST00000156134.8|Slc35c2|ENSMUSG00000017664.17|solute carrier family 35, member C2	ENSMUST00000133961.8|Slc35c2|ENSMUSG00000017664.17|solute carrier family 35, member C2
mm39_v1_chr3_+_118355778_118355805	0.331837	Hoxa9_Hoxb9	ENSMUST00000039177.12|Dpyd|ENSMUSG00000033308.17|dihydropyrimidine dehydrogenase
mm39_v1_chr2_+_147206910_147206931	0.322405	Hoxa9_Hoxb9	ENSMUST00000109968.3|Pax1|ENSMUSG00000037034.17|paired box 1
mm39_v1_chr8_-_25164767_25164774	0.318452	Hoxa9_Hoxb9	ENSMUST00000033957.12|Adam18|ENSMUSG00000031552.14|a disintegrin and metallopeptidase domain 18
mm39_v1_chr3_+_66893031_66893073	0.31491	Hoxa9_Hoxb9	ENSMUST00000046542.13|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1	ENSMUST00000162693.8|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1
mm39_v1_chr10_+_129153986_129153986	0.307925	Hoxa9_Hoxb9	ENSMUST00000215503.2|Olfr780|ENSMUSG00000049573.4|olfactory receptor 780
mm39_v1_chr7_+_107501834_107501834	0.303744	Hoxa9_Hoxb9	ENSMUST00000210420.2|Olfr472|ENSMUSG00000073893.7|olfactory receptor 472
mm39_v1_chr9_-_101128976_101129003	0.302283	Hoxa9_Hoxb9	ENSMUST00000075941.12|Ppp2r3a|ENSMUSG00000043154.16|protein phosphatase 2, regulatory subunit B'', alpha
mm39_v1_chr16_-_17348996_17349007	0.29586	Hoxa9_Hoxb9	ENSMUST00000100125.12|Thap7|ENSMUSG00000022760.18|THAP domain containing 7
mm39_v1_chr9_-_19795639_19795639	0.290271	Hoxa9_Hoxb9	ENSMUST00000073765.6|Olfr862|ENSMUSG00000063842.6|olfactory receptor 862
mm39_v1_chr2_+_88479038_88479038	0.289866	Hoxa9_Hoxb9	ENSMUST00000120518.4|Olfr1192-ps1|ENSMUSG00000111590.3|olfactory receptor 1192, pseudogene 1
mm39_v1_chr11_-_99941369_99941382	0.279498	Hoxa9_Hoxb9	ENSMUST00000007318.2|Krt31|ENSMUSG00000048981.2|keratin 31
mm39_v1_chr3_+_66892979_66893026	0.275734	Hoxa9_Hoxb9	ENSMUST00000162362.8|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1	ENSMUST00000065074.14|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1	ENSMUST00000065047.13|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1
mm39_v1_chr6_+_70565173_70565173	0.273198	Hoxa9_Hoxb9	ENSMUST00000103398.2|Igkv3-9|ENSMUSG00000095338.2|immunoglobulin kappa variable 3-9
mm39_v1_chr19_-_10995390_10995404	0.270889	Hoxa9_Hoxb9	ENSMUST00000177684.3|Ms4a18|ENSMUSG00000094584.3|membrane-spanning 4-domains, subfamily A, member 18
mm39_v1_chr9_+_103917821_103917861	0.270455	Hoxa9_Hoxb9	ENSMUST00000216593.2|Nphp3|ENSMUSG00000032558.20|nephronophthisis 3 (adolescent)	ENSMUST00000147249.3|Gm28305|ENSMUSG00000101152.2|predicted gene 28305
mm39_v1_chrX_+_158623460_158623477	0.266314	Hoxa9_Hoxb9	ENSMUST00000112451.8|Sh3kbp1|ENSMUSG00000040990.18|SH3-domain kinase binding protein 1	ENSMUST00000112453.9|Sh3kbp1|ENSMUSG00000040990.18|SH3-domain kinase binding protein 1
mm39_v1_chr9_+_44966464_44966494	0.263009	Hoxa9_Hoxb9	ENSMUST00000114664.8|Mpzl3|ENSMUSG00000070305.11|myelin protein zero-like 3
mm39_v1_chr1_-_107011236_107011236	0.261057	Hoxa9_Hoxb9	ENSMUST00000023861.5|Serpinb3d|ENSMUSG00000058017.7|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3D
mm39_v1_chr11_+_115294560_115294603	0.26093	Hoxa9_Hoxb9	ENSMUST00000153983.8|Mrpl58|ENSMUSG00000018858.16|mitochondrial ribosomal protein L58	ENSMUST00000106539.10|Mrpl58|ENSMUSG00000018858.16|mitochondrial ribosomal protein L58	ENSMUST00000103036.5|Mrpl58|ENSMUSG00000018858.16|mitochondrial ribosomal protein L58
mm39_v1_chr7_-_29643172_29643181	0.257716	Hoxa9_Hoxb9	ENSMUST00000108212.8|Zfp74|ENSMUSG00000059975.16|zinc finger protein 74
mm39_v1_chr7_-_12468931_12468931	0.252579	Hoxa9_Hoxb9	ENSMUST00000233304.2|Vmn2r56|ENSMUSG00000090762.3|vomeronasal 2, receptor 56	ENSMUST00000233373.2|Vmn2r56|ENSMUSG00000090762.3|vomeronasal 2, receptor 56	ENSMUST00000233874.2|Vmn2r56|ENSMUSG00000090762.3|vomeronasal 2, receptor 56	ENSMUST00000233902.2|Vmn2r56|ENSMUSG00000090762.3|vomeronasal 2, receptor 56
mm39_v1_chr15_+_11000802_11000823	0.248994	Hoxa9_Hoxb9	ENSMUST00000117100.4|Slc45a2|ENSMUSG00000022243.11|solute carrier family 45, member 2
mm39_v1_chr7_-_29931612_29931697	0.239104	Hoxa9_Hoxb9	ENSMUST00000006254.6|Tbcb|ENSMUSG00000006095.13|tubulin folding cofactor B
mm39_v1_chr9_-_101076198_101076278	0.221725	Hoxa9_Hoxb9	ENSMUST00000066773.9|Ppp2r3a|ENSMUSG00000043154.16|protein phosphatase 2, regulatory subunit B'', alpha
mm39_v1_chr7_+_19927635_19927635	0.22031	Hoxa9_Hoxb9	ENSMUST00000168984.2|Vmn1r95|ENSMUSG00000094735.2|vomeronasal 1 receptor, 95
mm39_v1_chr2_-_165129773_165129789	0.210269	Hoxa9_Hoxb9	ENSMUST00000109300.9|Slc35c2|ENSMUSG00000017664.17|solute carrier family 35, member C2
mm39_v1_chr7_+_106413336_106413367	0.209207	Hoxa9_Hoxb9	ENSMUST00000166880.3|Olfr701|ENSMUSG00000036744.14|olfactory receptor 701	ENSMUST00000075414.8|Olfr701|ENSMUSG00000036744.14|olfactory receptor 701
mm39_v1_chr2_+_87362140_87362140	0.208878	Hoxa9_Hoxb9	ENSMUST00000217113.2|Olfr153|ENSMUSG00000061520.5|olfactory receptor 153
mm39_v1_chr14_-_33700719_33700748	0.207765	Hoxa9_Hoxb9	ENSMUST00000166737.2|Zfp488|ENSMUSG00000044519.9|zinc finger protein 488
mm39_v1_chr9_+_121196034_121196108	0.206433	Hoxa9_Hoxb9	ENSMUST00000210636.2|Trak1|ENSMUSG00000032536.13|trafficking protein, kinesin binding 1	ENSMUST00000045903.8|Trak1|ENSMUSG00000032536.13|trafficking protein, kinesin binding 1
mm39_v1_chr3_+_57332735_57332873	0.205909	Hoxa9_Hoxb9	ENSMUST00000029377.8|Tm4sf4|ENSMUSG00000027801.8|transmembrane 4 superfamily member 4
mm39_v1_chr7_+_21006104_21006104	0.201272	Hoxa9_Hoxb9	ENSMUST00000098739.3|Vmn1r125|ENSMUSG00000095309.2|vomeronasal 1 receptor 125
mm39_v1_chr8_-_96301825_96301825	0.195936	Hoxa9_Hoxb9	ENSMUST00000180075.2|Prss54|ENSMUSG00000048400.14|protease, serine 54
mm39_v1_chr1_-_125362321_125362383	0.193629	Hoxa9_Hoxb9	ENSMUST00000191544.7|Actr3|ENSMUSG00000026341.17|ARP3 actin-related protein 3
mm39_v1_chr5_+_31609772_31609795	0.180763	Hoxa9_Hoxb9	ENSMUST00000202061.4|Zfp512|ENSMUSG00000062761.8|zinc finger protein 512	ENSMUST00000076264.8|Zfp512|ENSMUSG00000062761.8|zinc finger protein 512	ENSMUST00000201450.4|Zfp512|ENSMUSG00000062761.8|zinc finger protein 512
mm39_v1_chrX_+_110920704_110920704	0.180219	Hoxa9_Hoxb9	ENSMUST00000131304.2|Tex16|ENSMUSG00000034555.15|testis expressed gene 16
mm39_v1_chr1_+_59296065_59296066	0.178011	Hoxa9_Hoxb9	ENSMUST00000160662.8|Cdk15|ENSMUSG00000026023.17|cyclin-dependent kinase 15	ENSMUST00000114248.3|Cdk15|ENSMUSG00000026023.17|cyclin-dependent kinase 15
mm39_v1_chr7_-_19967753_19967753	0.174221	Hoxa9_Hoxb9	ENSMUST00000168580.2|Vmn1r242|ENSMUSG00000094757.2|vomeronasal 1 receptor 242
mm39_v1_chr11_-_109188917_109188944	0.165253	Hoxa9_Hoxb9	ENSMUST00000106704.3|Rgs9|ENSMUSG00000020599.14|regulator of G-protein signaling 9
mm39_v1_chr6_+_41098273_41098330	0.156532	Hoxa9_Hoxb9	ENSMUST00000103270.4|Trbv13-2|ENSMUSG00000076469.4|T cell receptor beta, variable 13-2
mm39_v1_chr3_+_108561247_108561280	0.15548	Hoxa9_Hoxb9	ENSMUST00000124384.8|Clcc1|ENSMUSG00000027884.17|chloride channel CLIC-like 1	ENSMUST00000029483.15|Clcc1|ENSMUSG00000027884.17|chloride channel CLIC-like 1
mm39_v1_chr6_+_56933451_56933451	0.154697	Hoxa9_Hoxb9	ENSMUST00000096612.4|Vmn1r4|ENSMUSG00000071893.8|vomeronasal 1 receptor 4
mm39_v1_chr4_+_146586445_146586484	0.154234	Hoxa9_Hoxb9	ENSMUST00000105735.9|Zfp981|ENSMUSG00000056300.15|zinc finger protein 981
mm39_v1_chr2_+_36674288_36674368	0.144654	Hoxa9_Hoxb9	ENSMUST00000213498.2|Olfr348|ENSMUSG00000049315.5|olfactory receptor 348	ENSMUST00000214909.3|Olfr348|ENSMUSG00000049315.5|olfactory receptor 348	ENSMUST00000215199.2|Olfr348|ENSMUSG00000049315.5|olfactory receptor 348
mm39_v1_chr5_+_31609802_31609860	0.144127	Hoxa9_Hoxb9	ENSMUST00000202244.4|Zfp512|ENSMUSG00000062761.8|zinc finger protein 512
mm39_v1_chr19_+_13628455_13628455	0.134186	Hoxa9_Hoxb9	ENSMUST00000213900.2|Olfr1490|ENSMUSG00000061387.4|olfactory receptor 1490
mm39_v1_chr17_+_18801989_18801989	0.133932	Hoxa9_Hoxb9	ENSMUST00000165692.8|Vmn2r96|ENSMUSG00000091679.10|vomeronasal 2, receptor 96
mm39_v1_chr14_-_41802974_41802974	0.133028	Hoxa9_Hoxb9	ENSMUST00000179947.2|Gm3543|ENSMUSG00000093945.2|predicted gene 3543
mm39_v1_chr2_-_27354006_27354128	0.132916	Hoxa9_Hoxb9	ENSMUST00000164296.8|Brd3|ENSMUSG00000026918.17|bromodomain containing 3
mm39_v1_chr9_+_19620729_19620729	0.132027	Hoxa9_Hoxb9	ENSMUST00000217450.4|Olfr857|ENSMUSG00000094678.6|olfactory receptor 857	ENSMUST00000212013.4|Olfr857|ENSMUSG00000094678.6|olfactory receptor 857
mm39_v1_chr16_-_88609108_88609124	0.13116	Hoxa9_Hoxb9	ENSMUST00000232664.2|Gm20741|ENSMUSG00000116636.2|predicted gene, 20741
mm39_v1_chr2_+_86655007_86655007	0.128487	Hoxa9_Hoxb9	ENSMUST00000217509.2|Olfr1094|ENSMUSG00000044213.5|olfactory receptor 1094
mm39_v1_chr19_+_13208692_13208692	0.126476	Hoxa9_Hoxb9	ENSMUST00000207246.4|Olfr1463|ENSMUSG00000096365.5|olfactory receptor 1463
mm39_v1_chr6_-_122317457_122317471	0.12608	Hoxa9_Hoxb9	ENSMUST00000160843.8|Phc1|ENSMUSG00000040669.15|polyhomeotic 1
mm39_v1_chrX_-_52298601_52298676	0.124292	Hoxa9_Hoxb9	ENSMUST00000174390.2|Plac1|ENSMUSG00000061082.12|placental specific protein 1
mm39_v1_chr11_+_50905063_50905184	0.121626	Hoxa9_Hoxb9	ENSMUST00000217480.2|Olfr54|ENSMUSG00000059397.3|olfactory receptor 54	ENSMUST00000215409.2|Olfr54|ENSMUSG00000059397.3|olfactory receptor 54
mm39_v1_chr7_-_37970734_37970847	0.116731	Hoxa9_Hoxb9	ENSMUST00000032585.8|Pop4|ENSMUSG00000030423.8|processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)
mm39_v1_chr18_+_69633741_69634029	0.115758	Hoxa9_Hoxb9	ENSMUST00000207214.2|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000201094.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000200703.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000202765.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4
mm39_v1_chr1_-_75208734_75208734	0.112663	Hoxa9_Hoxb9	ENSMUST00000180101.3|A630095N17Rik|ENSMUSG00000096094.3|RIKEN cDNA A630095N17 gene
mm39_v1_chr19_-_33764859_33764859	0.106911	Hoxa9_Hoxb9	ENSMUST00000148137.9|Lipo1|ENSMUSG00000079342.12|lipase, member O1
mm39_v1_chr3_-_113367891_113367921	0.099803	Hoxa9_Hoxb9	ENSMUST00000142505.9|Amy1|ENSMUSG00000074264.13|amylase 1, salivary
mm39_v1_chr16_-_59036978_59036978	0.0983055	Hoxa9_Hoxb9	ENSMUST00000099657.5|Olfr199|ENSMUSG00000074996.5|olfactory receptor 199
mm39_v1_chr1_-_97689263_97689391	0.095462	Hoxa9_Hoxb9	ENSMUST00000171129.8|Ppip5k2|ENSMUSG00000040648.16|diphosphoinositol pentakisphosphate kinase 2
mm39_v1_chr12_-_100125860_100125926	0.0949302	Hoxa9_Hoxb9	ENSMUST00000021596.9|Nrde2|ENSMUSG00000021179.9|nrde-2 necessary for RNA interference, domain containing	ENSMUST00000221954.2|Nrde2|ENSMUSG00000021179.9|nrde-2 necessary for RNA interference, domain containing
mm39_v1_chr5_+_26462689_26462689	0.0939311	Hoxa9_Hoxb9	ENSMUST00000074148.7|Gm7361|ENSMUSG00000059645.7|predicted gene 7361
mm39_v1_chr18_+_13139992_13140094	0.0887788	Hoxa9_Hoxb9	ENSMUST00000041676.3|Hrh4|ENSMUSG00000037346.6|histamine receptor H4	ENSMUST00000234084.2|Hrh4|ENSMUSG00000037346.6|histamine receptor H4	ENSMUST00000234565.2|Hrh4|ENSMUSG00000037346.6|histamine receptor H4
mm39_v1_chr19_-_13075176_13075255	0.0871137	Hoxa9_Hoxb9	ENSMUST00000208913.2|Olfr1457|ENSMUSG00000061637.6|olfactory receptor 1457	ENSMUST00000215229.2|Olfr1457|ENSMUSG00000061637.6|olfactory receptor 1457
mm39_v1_chr3_+_108561294_108561306	0.085224	Hoxa9_Hoxb9	ENSMUST00000106613.2|Clcc1|ENSMUSG00000027884.17|chloride channel CLIC-like 1
mm39_v1_chr7_+_20505110_20505110	0.0825641	Hoxa9_Hoxb9	ENSMUST00000174538.2|Vmn1r112|ENSMUSG00000094284.2|vomeronasal 1 receptor 112
mm39_v1_chr6_-_141719536_141719536	0.0795092	Hoxa9_Hoxb9	ENSMUST00000148411.2|Gm5724|ENSMUSG00000084927.2|predicted gene 5724
mm39_v1_chr7_-_103191924_103191924	0.0792524	Hoxa9_Hoxb9	ENSMUST00000214269.3|Olfr612|ENSMUSG00000094119.4|olfactory receptor 612
mm39_v1_chr7_+_44711853_44711950	0.0780108	Hoxa9_Hoxb9	ENSMUST00000107829.9|Nosip|ENSMUSG00000003421.14|nitric oxide synthase interacting protein	ENSMUST00000003513.11|Nosip|ENSMUSG00000003421.14|nitric oxide synthase interacting protein	ENSMUST00000211465.2|Nosip|ENSMUSG00000003421.14|nitric oxide synthase interacting protein	ENSMUST00000210088.2|Nosip|ENSMUSG00000003421.14|nitric oxide synthase interacting protein	ENSMUST00000210520.2|Nosip|ENSMUSG00000003421.14|nitric oxide synthase interacting protein
mm39_v1_chr3_+_108561223_108561244	0.0767082	Hoxa9_Hoxb9	ENSMUST00000106609.8|Clcc1|ENSMUSG00000027884.17|chloride channel CLIC-like 1
mm39_v1_chr12_+_71184614_71184614	0.0749766	Hoxa9_Hoxb9	ENSMUST00000045907.16|2700049A03Rik|ENSMUSG00000034601.18|RIKEN cDNA 2700049A03 gene
mm39_v1_chr7_-_85974838_85974838	0.0723156	Hoxa9_Hoxb9	ENSMUST00000214977.2|Olfr308|ENSMUSG00000054498.7|olfactory receptor 308
mm39_v1_chr7_-_103721076_103721076	0.0699679	Hoxa9_Hoxb9	ENSMUST00000213184.2|Olfr644|ENSMUSG00000110012.3|olfactory receptor 644	ENSMUST00000213991.2|Olfr644|ENSMUSG00000110012.3|olfactory receptor 644
mm39_v1_chr2_-_88768449_88768455	0.066841	Hoxa9_Hoxb9	ENSMUST00000215205.2|Olfr1211|ENSMUSG00000075112.3|olfactory receptor 1211	ENSMUST00000213412.2|Olfr1211|ENSMUSG00000075112.3|olfactory receptor 1211
mm39_v1_chr4_-_58787716_58787716	0.0657662	Hoxa9_Hoxb9	ENSMUST00000216719.2|Olfr267|ENSMUSG00000043385.5|olfactory receptor 267
mm39_v1_chr13_-_59853995_59854011	0.062016	Hoxa9_Hoxb9	ENSMUST00000066510.8|Spata31d1a|ENSMUSG00000050876.10|spermatogenesis associated 31 subfamily D, member 1A	ENSMUST00000224469.2|Spata31d1a|ENSMUSG00000050876.10|spermatogenesis associated 31 subfamily D, member 1A
mm39_v1_chr6_-_143892814_143892837	0.0594637	Hoxa9_Hoxb9	ENSMUST00000124233.7|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5	ENSMUST00000144289.4|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5	ENSMUST00000111748.8|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5
mm39_v1_chr8_-_96302083_96302083	0.0588219	Hoxa9_Hoxb9	ENSMUST00000213096.2|Prss54|ENSMUSG00000048400.14|protease, serine 54	ENSMUST00000052690.13|Prss54|ENSMUSG00000048400.14|protease, serine 54
mm39_v1_chr4_+_147056433_147056433	0.0581745	Hoxa9_Hoxb9	ENSMUST00000146688.3|Zfp989|ENSMUSG00000086147.3|zinc finger protein 989
mm39_v1_chr15_-_34356567_34356567	0.0561583	Hoxa9_Hoxb9	ENSMUST00000179647.2|9430069I07Rik|ENSMUSG00000094447.3|RIKEN cDNA 9430069I07 gene
mm39_v1_chr7_+_21348017_21348017	0.0554501	Hoxa9_Hoxb9	ENSMUST00000098736.5|Vmn1r132|ENSMUSG00000074322.6|vomeronasal 1 receptor 132
mm39_v1_chr2_+_85597442_85597442	0.0502987	Hoxa9_Hoxb9	ENSMUST00000216397.3|Olfr1013|ENSMUSG00000053287.5|olfactory receptor 1013
mm39_v1_chrY_+_2904133_2904133	0.0496346	Hoxa9_Hoxb9	ENSMUST00000166474.3|Gm10352|ENSMUSG00000091987.9|predicted gene 10352
mm39_v1_chr17_+_38214413_38214413	0.0483904	Hoxa9_Hoxb9	ENSMUST00000076331.3|Olfr127|ENSMUSG00000058114.4|olfactory receptor 127
mm39_v1_chrX_+_35664933_35664933	0.0467544	Hoxa9_Hoxb9	ENSMUST00000115253.3|Gm6268|ENSMUSG00000079642.3|predicted gene 6268
mm39_v1_chr4_+_145397238_145397255	0.0368139	Hoxa9_Hoxb9	ENSMUST00000105738.9|Zfp980|ENSMUSG00000058186.14|zinc finger protein 980
mm39_v1_chr6_-_133014064_133014064	0.0365889	Hoxa9_Hoxb9	ENSMUST00000032317.4|Tas2r103|ENSMUSG00000030196.4|taste receptor, type 2, member 103
mm39_v1_chr15_+_3300249_3300488	0.0352542	Hoxa9_Hoxb9	ENSMUST00000082424.12|Selenop|ENSMUSG00000064373.14|selenoprotein P	ENSMUST00000159158.9|Selenop|ENSMUSG00000064373.14|selenoprotein P	ENSMUST00000159216.10|Selenop|ENSMUSG00000064373.14|selenoprotein P	ENSMUST00000160311.3|Selenop|ENSMUSG00000064373.14|selenoprotein P
mm39_v1_chr2_+_87436556_87436600	0.0335904	Hoxa9_Hoxb9	ENSMUST00000213103.3|Olfr1130|ENSMUSG00000059205.6|olfactory receptor 1130	ENSMUST00000216580.2|Olfr1130|ENSMUSG00000059205.6|olfactory receptor 1130
mm39_v1_chr16_-_22630327_22630327	0.0304178	Hoxa9_Hoxb9	ENSMUST00000040592.6|Crygs|ENSMUSG00000033501.6|crystallin, gamma S
mm39_v1_chr7_-_12342715_12342715	0.0298282	Hoxa9_Hoxb9	ENSMUST00000233892.2|Vmn2r53|ENSMUSG00000096002.3|vomeronasal 2, receptor 53
mm39_v1_chr2_+_111984716_111984717	0.0274384	Hoxa9_Hoxb9	ENSMUST00000214063.2|Olfr1318|ENSMUSG00000049758.8|olfactory receptor 1318	ENSMUST00000217533.2|Olfr1318|ENSMUSG00000049758.8|olfactory receptor 1318
mm39_v1_chr7_-_20646272_20646272	0.0227767	Hoxa9_Hoxb9	ENSMUST00000172322.2|Vmn1r118|ENSMUSG00000094589.2|vomeronasal 1 receptor 118
mm39_v1_chr7_-_21928909_21928909	0.0227748	Hoxa9_Hoxb9	ENSMUST00000167253.2|Vmn1r252|ENSMUSG00000094149.2|vomeronasal 1 receptor 252
mm39_v1_chr14_+_52680447_52680508	0.0213616	Hoxa9_Hoxb9	ENSMUST00000205900.3|Olfr1509|ENSMUSG00000035626.5|olfactory receptor 1509	ENSMUST00000215030.2|Olfr1509|ENSMUSG00000035626.5|olfactory receptor 1509	ENSMUST00000206100.2|Olfr1509|ENSMUSG00000035626.5|olfactory receptor 1509	ENSMUST00000206718.2|Olfr1509|ENSMUSG00000035626.5|olfactory receptor 1509
mm39_v1_chr2_+_85545763_85545763	0.0207692	Hoxa9_Hoxb9	ENSMUST00000216443.3|Olfr1009|ENSMUSG00000043226.6|olfactory receptor 1009
mm39_v1_chr2_-_151586063_151586125	0.0203797	Hoxa9_Hoxb9	ENSMUST00000109869.2|Psmf1|ENSMUSG00000032869.16|proteasome (prosome, macropain) inhibitor subunit 1
mm39_v1_chr2_+_85804239_85804239	0.0151393	Hoxa9_Hoxb9	ENSMUST00000217244.2|Olfr1029|ENSMUSG00000059873.5|olfactory receptor 1029
mm39_v1_chr7_-_23508625_23508625	0.00867564	Hoxa9_Hoxb9	ENSMUST00000166141.2|Vmn1r175|ENSMUSG00000095632.3|vomeronasal 1 receptor 175
mm39_v1_chr7_-_12829100_12829100	0.00847085	Hoxa9_Hoxb9	ENSMUST00000209822.3|Vmn1r85|ENSMUSG00000070817.4|vomeronasal 1 receptor 85	ENSMUST00000235753.2|Vmn1r85|ENSMUSG00000070817.4|vomeronasal 1 receptor 85
mm39_v1_chr17_+_38456172_38456284	0.00348261	Hoxa9_Hoxb9	ENSMUST00000215078.3|Olfr133|ENSMUSG00000063240.7|olfactory receptor 133	ENSMUST00000215549.3|Olfr133|ENSMUSG00000063240.7|olfactory receptor 133	ENSMUST00000173610.2|Olfr133|ENSMUSG00000063240.7|olfactory receptor 133
mm39_v1_chr7_+_20606181_20606181	0.00292654	Hoxa9_Hoxb9	ENSMUST00000164288.2|Vmn1r116|ENSMUSG00000095973.2|vomeronasal 1 receptor 116
mm39_v1_chr9_-_39862065_39862065	0.0009416	Hoxa9_Hoxb9	ENSMUST00000054067.4|Olfr975|ENSMUSG00000043331.7|olfactory receptor 975
mm39_v1_chr13_+_16189041_16189060	0.000629346	Hoxa9_Hoxb9	ENSMUST00000164993.2|Inhba|ENSMUSG00000041324.15|inhibin beta-A
